mRNA_P-lacustris_contig114.1100.1 (mRNA) Pleurocladia lacustris SAG_25_93

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-lacustris_contig114.1100.1
Unique NamemRNA_P-lacustris_contig114.1100.1
TypemRNA
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Homology
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BLAST of mRNA_P-lacustris_contig114.1100.1 vs. uniprot
Match: D8LD21_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD21_ECTSI)

HSP 1 Score: 365 bits (936), Expect = 3.590e-123
Identity = 183/214 (85.51%), Postives = 201/214 (93.93%), Query Frame = 3 
Query:    9 AQHWTDTYNKWSNWQDPDEVAKKREEEEKRARSYRENHMSCNHDRSAERKVMDMPIEEKILACREFRHRGNLFHAEGQYRRGALQYRQALIYYDFCFPDDESQQQELDEIHQACLLNSAACFLACGELDQTLNCCYQARALRAEPNNVKALYRRAVVYRLRDQFKEASVDLGRALAQRPNEVVLRKESAVLKSKIASYKERRRSMVANIFGKDQ 650
            A HWT TY+KW  W+DPDE+AKKREEEEKRA+SYRENHM+C HDRSAERKVM+MPIEEKI ACR+FR RGNLFHAEGQYRRGALQYRQALIYYDFCFPD++SQQQELD+I QACLLNSAACFLACGELDQTL+CCYQA  LRAEPNNVKALYRRAVVYRLRD+FKEASVDLG+ALAQRPNEV+LRKESAVLKSKIASY+ERR++M   IFGK+Q
Sbjct:   17 APHWTHTYDKWDGWEDPDELAKKREEEEKRAKSYRENHMACAHDRSAERKVMEMPIEEKISACRDFRQRGNLFHAEGQYRRGALQYRQALIYYDFCFPDEDSQQQELDDIRQACLLNSAACFLACGELDQTLDCCYQA--LRAEPNNVKALYRRAVVYRLRDRFKEASVDLGKALAQRPNEVMLRKESAVLKSKIASYRERRKAMGEQIFGKEQ 228
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BLAST of mRNA_P-lacustris_contig114.1100.1 vs. uniprot
Match: A0A6H5KB41_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB41_9PHAE)

HSP 1 Score: 268 bits (686), Expect = 3.080e-86
Identity = 165/277 (59.57%), Postives = 196/277 (70.76%), Query Frame = 3 
Query:  162 MDMPIEEKILACREFRHRGNLFHAEGQYRRGALQYRQALIYYDFCFPDDESQQQELDEIHQACLLNSAACFLACGELDQTLNCCYQA------------RALRAEPNNVKALYRRAVVYRLRDQFKEASVDLGRALAQRPNEVVLRKESAVLKSKIASYKERRRSMVANIFGKDQQQDXXXXXXXXXVDDDHTGDQGPLFPPKEQIESQIPGGNDKTSPHWAEGDDPSIYSGPAA--GRKETAGVYAVAATIGLTGLSGMSRLSGRGEQEGKRRHDL 950
            M++PIEEKI ACR+FR  GNLFHAEGQ   G+     ALIYYDFCFPDD+SQQQELD+I QACLLNSAACFLACGELDQTL+CCYQA            RALRAEPNNVKALYRRAVVYRLRD+FKEASVDLG+ALAQRPNEV+LRKESAVLKSKIASY+ERR++M  +IFGK+Q +D              +G+ G     +++ E+Q   G++ ++   AE DDP     PAA  G  E+ G YAV A +   G       SG G++EG+R HDL
Sbjct:    1 MEVPIEEKISACRDFRQGGNLFHAEGQ---GSA----ALIYYDFCFPDDDSQQQELDDIRQACLLNSAACFLACGELDQTLDCCYQASCCPLAHFLGRARALRAEPNNVKALYRRAVVYRLRDRFKEASVDLGKALAQRPNEVMLRKESAVLKSKIASYRERRKAMGEHIFGKEQGRDQDNARGS-------SGNNGRAL--QQESETQEKDGSEPSAVEAAE-DDPYQCFAPAAAVGGNESGGGYAVTAAVVPAG-------SGSGKEEGRRWHDL 253
[Close]
BLAST of mRNA_P-lacustris_contig114.1100.1 vs. uniprot
Match: A0A836CM33_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CM33_9STRA)

HSP 1 Score: 165 bits (418), Expect = 1.770e-45
Identity = 96/215 (44.65%), Postives = 130/215 (60.47%), Query Frame = 3 
Query:   18 WTDTYNKWSNWQDPDEVAKK-REEEEKRARSYRENHMS--CNHDRSAERKVMDMPIEEKILACREFRHRGNLFHAEGQYRRGALQYRQALIYYDFCFPDDESQQQELDEIHQACLLNSAACFLACGELDQTLNCCYQARALRAEPNNVKALYRRAVVYRLRDQFKEASVDLGRALA----QRPNEVVLRKESAVLKSKIASYKERRRSMVANIFG 641
            WT TY+ W  W+DP++ A+  ++  EK  R+ R   +S  C+HD SAE+++MD+   EK+ AC  FR +GN F  EGQY+R  LQYRQALIY D+ FPD    Q  LD++  ACLLNSAACF+  GEL + L  C QA  L+  P   KALYRRA VYRL+D+F  A  DL  A      +  +   LR E  +L+++   Y    R++   +FG
Sbjct:   21 WTRTYSYWDRWEDPEQGARPAKDNAEKTDRAARSQALSGCCSHDHSAEKRIMDLSEPEKVAACEAFRAKGNAFFEEGQYQRATLQYRQALIYCDYAFPDAGELQTRLDDVRLACLLNSAACFVRAGELGEALEACEQA--LQERPRCAKALYRRAQVYRLKDEFALAKADLAAAXXXXXPRAADAAALRHERMMLRARETCYGANARALGRQMFG 233
[Close]
BLAST of mRNA_P-lacustris_contig114.1100.1 vs. uniprot
Match: A0A662XSD5_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XSD5_9STRA)

HSP 1 Score: 164 bits (416), Expect = 2.630e-44
Identity = 91/215 (42.33%), Postives = 136/215 (63.26%), Query Frame = 3 
Query:   18 WTDTYNKWSNWQDPDEVAKKREEEEKRARSYRENHMSCNHDRSAERKVMDMPIEEKILACREFRHRGNLFHAEGQYRRGALQYRQALIYYDFCFPDDESQQQELDEIHQACLLNSAACFLACGELDQTLNCCYQARALRAEPNNVKALYRRAVVYRLRDQFKEASVDLGRALAQR-------PNEVVLRKESAVLKSKIASYKERRRSMVANIFG 641
            WT TY KW  W+DP+E+A++ +   +R+    +  M CNHD SAE+K+MDM  +EK+ AC EFR  GNLF   GQY+R A  Y +AL+Y+++ FPD E +  + D +    LLN AAC L    LD  ++  +  +AL+ +P+NVKALYRRA  YRL+D+F+ AS D+ RAL           ++ +L +E A+L++K+ +YK R + +   +FG
Sbjct:   98 WTRTYEKWDAWEDPEELARQEQAARERSERAAKAQMGCNHDHSAEQKLMDMSTQEKLTACDEFRVLGNLFFRHGQYQRAAYNYHKALVYFEYVFPDTEEEDIQADALKLKLLLNFAACRLKTLHLDDAIH--HANQALQLDPDNVKALYRRAQAYRLKDEFELASQDISRALELSGTSENAPTSDPLLVQEKALLQAKMLAYKLRTKQVSTAMFG 310
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BLAST of mRNA_P-lacustris_contig114.1100.1 vs. uniprot
Match: A0A7S2HHR7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HHR7_9STRA)

HSP 1 Score: 160 bits (406), Expect = 3.880e-43
Identity = 92/208 (44.23%), Postives = 133/208 (63.94%), Query Frame = 3 
Query:   18 WTDTYNKWSNWQDPDEVAKKREEEEKRARSYRENHMSCNHDRSAERKVMDMPIEEKILACREFRHRGNLFHAEGQYRRGALQYRQALIYYDFCFPDDESQQQEL-DEIHQACLLNSAACFLACGELDQTLNCCYQARALRAEPNNVKALYRRAVVYRLRDQFKEASVDLGRALAQRPNEVVLRKESAVLKSKIASYKERRRSMVANIF 638
            W+  Y ++  + D +E A+  E+E ++A + R    SC+HD S ER+V ++P+++KI A   F  RGN+   EGQY   + QY+ A++YY++ FPD+ S + ++ + I   C LNSAAC +  G  D+ LN CYQ   LR EP NVKALYRRA +YR+RDQF EA  DL  A  + PN+V LR+E   L +KI SY+ +R +M  +IF
Sbjct:    9 WSQKYREFDGFIDHEEQAQIEEQERQKATAQRPG-TSCSHDHSRERQVYELPLDKKIEAMDRFHLRGNILFDEGQYEMASEQYKSAMVYYEYTFPDEGSDEWDVVNRIRLVCNLNSAACNMKAGLYDEALNNCYQV--LREEPLNVKALYRRAQMYRIRDQFSEAKADLLLAWRELPNDVQLRQEYLTLSNKIKSYRRKREAMAKHIF 213
[Close]
BLAST of mRNA_P-lacustris_contig114.1100.1 vs. uniprot
Match: K3WFS9_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WFS9_GLOUD)

HSP 1 Score: 159 bits (403), Expect = 7.690e-43
Identity = 88/211 (41.71%), Postives = 133/211 (63.03%), Query Frame = 3 
Query:   18 WTDTYNKWSNWQDPDEVAKKREEEEKRARSYRENHMSCNHDRSAERKVMDMPIEEKILACREFRHRGNLFHAEGQYRRGALQYRQALIYYDFCFPDDESQQQELDEIHQACLLNSAACFLACGELDQTLNCCYQARALRAEPNNVKALYRRAVVYRLRDQFKEASVDLGRAL----AQRPNEVVLRKESAVLKSKIASYKERRRSMVANIF 638
            WT TY KW  W+DP+E+A++ +E  +R+       + CNHD SAE+K+MDM  +EK+ AC EFR  GNLF   GQY+R A  Y +AL+Y+++ FPD +++ +  D +    LLN AAC L  G L+  +    QA AL  +  NVKALYRRA  +RLRD F  A  D+ RA+    A+  ++ +L +E A+L++K+ +YK + + + + +F
Sbjct:   59 WTKTYEKWDAWEDPEELARQEQEARERSERVAREQLGCNHDHSAEQKLMDMMTQEKLDACDEFRQLGNLFFQHGQYQRAAYHYHKALVYFEYIFPDTDAETEHHDALKLKVLLNFAACRLKTGHLEDVVQHADQALAL--DVANVKALYRRAQAHRLRDDFDRAMQDINRAIEIAQAEDASDPLLVQEKALLQAKMLAYKLKSKQVSSAMF 267
[Close]
BLAST of mRNA_P-lacustris_contig114.1100.1 vs. uniprot
Match: A0A329SRI4_9STRA (Uncharacterized protein n=9 Tax=Phytophthora TaxID=4783 RepID=A0A329SRI4_9STRA)

HSP 1 Score: 155 bits (392), Expect = 3.780e-41
Identity = 89/215 (41.40%), Postives = 129/215 (60.00%), Query Frame = 3 
Query:   18 WTDTYNKWSNWQDPDEVAKKREEEEKRARSYRENHMSCNHDRSAERKVMDMPIEEKILACREFRHRGNLFHAEGQYRRGALQYRQALIYYDFCFPDDESQQQELDEIHQACLLNSAACFLACGELDQTLNCCYQARALRAEPNNVKALYRRAVVYRLRDQFKEASVDLGRAL-------AQRPNEVVLRKESAVLKSKIASYKERRRSMVANIFG 641
            WT TY KW  W+DP+E+A++ +E  +R+    +  M CNHD SAE+K+MDM  +EK+ AC EFR  GNLF   GQY+R A  Y +AL+Y+++ F D               LLN AAC L    LD  ++  +  +AL  +PNNVKALYRRA  YRL+D+F  A  D+ RA+       A +  + +L +E  +L++K+ +YK R + + A +FG
Sbjct:   63 WTRTYEKWDAWEDPEELARQEQEARERSERAAKAQMGCNHDHSAEQKLMDMTTQEKLAACDEFRVLGNLFFKHGQYQRAAFHYHKALVYFEYVFTDXXXXXXXXXXXXXXLLLNFAACRLKTMHLDDAVH--HANQALEIDPNNVKALYRRAQAYRLKDEFDLAQKDIERAVELSKAAEATQSVDSLLIQEKKLLQAKVLAYKLRTKQVSAAMFG 275
[Close]
BLAST of mRNA_P-lacustris_contig114.1100.1 vs. uniprot
Match: A0A2D4CGS1_PYTIN (Uncharacterized protein n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CGS1_PYTIN)

HSP 1 Score: 152 bits (385), Expect = 1.050e-40
Identity = 86/213 (40.38%), Postives = 129/213 (60.56%), Query Frame = 3 
Query:   18 WTDTYNKWSNWQDPDEVAKK----REEEEKRARSYRENHMSCNHDRSAERKVMDMPIEEKILACREFRHRGNLFHAEGQYRRGALQYRQALIYYDFCFPDDESQQQELDEIHQACLLNSAACFLACGELDQTLNCCYQARALRAEPNNVKALYRRAVVYRLRDQFKEASVDLGRALA---QRPNEVVLRKESAVLKSKIASYKERRRSMVANI 635
            WT  Y KW  W+DP+E+A++    RE+    AR+  +    CNHD S E+++MDM   EK+ AC EFR  GNLF  +GQY+R A  Y +AL+Y+++ FPD + + +  D +    LLN AAC L  G LD  L+  +  +ALR +P N KAL+RRA  +RLRD+F  A+ DL  ALA      +   + +E  +L++++ +YK + R + + I
Sbjct:   66 WTSVYEKWDAWEDPEELAQREQAAREKXXXAARAAAQG--PCNHDHSTEQRLMDMTTTEKLTACDEFRRLGNLFFEQGQYQRAAYHYHKALVYFEYVFPDTDDENEAFDSLRLKTLLNFAACRLHTGHLDDVLS--HTEQALRLDPTNAKALFRRAQAWRLRDEFARATEDLNAALAVAGAAADRAAILQEKTLLQARVLAYKIKSREVSSAI 274
[Close]
BLAST of mRNA_P-lacustris_contig114.1100.1 vs. uniprot
Match: D0NSG6_PHYIT (Uncharacterized protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0NSG6_PHYIT)

HSP 1 Score: 153 bits (386), Expect = 1.750e-40
Identity = 87/216 (40.28%), Postives = 132/216 (61.11%), Query Frame = 3 
Query:   15 HWTDTYNKWSNWQDPDEVAKKREEEEKRARSYRENHMSCNHDRSAERKVMDMPIEEKILACREFRHRGNLFHAEGQYRRGALQYRQALIYYDFCFPDDESQQQELDEIHQACLLNSAACFLACGELDQTLNCCYQARALRAEPNNVKALYRRAVVYRLRDQFKEASVDLGRALA------QRPN-EVVLRKESAVLKSKIASYKERRRSMVANIFG 641
            +WT TY KW  W+DP+++A++ +E  +R+    +  M CNHD SAE+K+MDM  +EK  AC E R  GNLF   GQY+R A  Y +AL+Y+++ FPD + ++ + D +    LLN AAC L    LD  ++  +  +AL    NNVKALYRRA   RL+D+F  A  D+ RA+         P+ + +L +E  +L++K+ +YK R + + A +FG
Sbjct:   41 NWTRTYEKWDAWEDPEDLARQEQEARERSERAAKAQMGCNHDHSAEQKLMDMTTQEKTTACDELRVLGNLFFKHGQYQRAAFHYHKALVYFEYVFPDTDEEEAQADALKLKLLLNFAACRLKTLHLDDAVH--HANQALEINTNNVKALYRRAQANRLKDEFHLAQKDIERAIKLSNATEDTPSIDSLLLQEKKLLQAKMLAYKLRTKQVSAAMFG 254
[Close]
BLAST of mRNA_P-lacustris_contig114.1100.1 vs. uniprot
Match: W4H9A9_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H9A9_9STRA)

HSP 1 Score: 153 bits (386), Expect = 2.940e-40
Identity = 90/212 (42.45%), Postives = 131/212 (61.79%), Query Frame = 3 
Query:   18 WTDTYNKWSNWQDPDEVAKKREEEEKRARSYREN-HMSCNHDRSAERKVMDMPIEEKILACREFRHRGNLFHAEGQYRRGALQYRQALIYYDFCFPDDESQQQELDEIHQACLLNSAACFLACGELDQTLNCCYQARALRAEPNNVKALYRRAVVYRLRDQFKEASVDLGRALAQRPNEVVLRKESAVLKSKIASYKERRRSMVANIFGKDQ 650
            WT  Y KWS W+DPDE+A K  E   R +S R +   SCNHD SAE+K+MDM    K+  C  FR  GN F A GQY+R A  +  AL+Y+++ F D +++Q E+D++ +  LLN A C L    +DQ +     + A++ +  +VKALY RA+ YR++D+F+ A VDL RALA  P +  L  E  VL +K A+Y  + + + A +FG++Q
Sbjct:   60 WTREYEKWSAWEDPDELAAK--EHAARVKSERASMRTSCNHDHSAEQKLMDMTTRAKLTQCDTFRRLGNRFFAHGQYQRAAYHFHHALVYFEYIFSDTDAEQVEMDDLKKRILLNFALCRLKTKHVDQAI--LNASLAMKLDGESVKALYIRAMGYRMQDKFELAQVDLDRALALAPQDSALVHEKHVLAAKKAAYVVKSKQLGAAMFGRNQ 267
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig114.1100.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LD21_ECTSI3.590e-12385.51Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KB41_9PHAE3.080e-8659.57Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CM33_9STRA1.770e-4544.65Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A662XSD5_9STRA2.630e-4442.33Uncharacterized protein n=1 Tax=Nothophytophthora ... [more]
A0A7S2HHR7_9STRA3.880e-4344.23Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
K3WFS9_GLOUD7.690e-4341.71Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A329SRI4_9STRA3.780e-4141.40Uncharacterized protein n=9 Tax=Phytophthora TaxID... [more]
A0A2D4CGS1_PYTIN1.050e-4040.38Uncharacterized protein n=2 Tax=Pythium insidiosum... [more]
D0NSG6_PHYIT1.750e-4040.28Uncharacterized protein n=2 Tax=Phytophthora infes... [more]
W4H9A9_9STRA2.940e-4042.45Uncharacterized protein n=3 Tax=Aphanomyces astaci... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig114contigP-lacustris_contig114:5745..12539 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score369.8
Seed ortholog evalue1.3e-99
Seed eggNOG ortholog2880.D8LD21
KEGG koko:K09571,ko:K20412
KEGG Pathwayko04915,map04915
Hectar predicted targeting categoryother localisation
GOsGO:0000413,GO:0003674,GO:0003755,GO:0003824,GO:0005488,GO:0005515,GO:0005516,GO:0005575,GO:0005623,GO:0005886,GO:0006464,GO:0006807,GO:0007275,GO:0008150,GO:0008152,GO:0009987,GO:0016020,GO:0016853,GO:0016859,GO:0018193,GO:0018208,GO:0019538,GO:0032501,GO:0032502,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044464,GO:0048366,GO:0048367,GO:0048731,GO:0048827,GO:0048856,GO:0071704,GO:0071944,GO:0099402,GO:0140096,GO:1901564
EggNOG free text desc.FK506 binding
EggNOG OGsCOG0545@1,KOG0543@2759
EC5.2.1.8
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03110,ko04090
Exons7
Model size959
Cds size954
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig114.1100.1prot_P-lacustris_contig114.1100.1Pleurocladia lacustris SAG_25_93polypeptideP-lacustris_contig114 5750..12539 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815445.7916791-UTR-P-lacustris_contig114:5744..57491622815445.7916791-UTR-P-lacustris_contig114:5744..5749Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig114 5745..5749 +
1693493544.471395-UTR-P-lacustris_contig114:5744..57491693493544.471395-UTR-P-lacustris_contig114:5744..5749Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig114 5745..5749 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815445.8047152-CDS-P-lacustris_contig114:5749..57971622815445.8047152-CDS-P-lacustris_contig114:5749..5797Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig114 5750..5797 +
1693493544.4846137-CDS-P-lacustris_contig114:5749..57971693493544.4846137-CDS-P-lacustris_contig114:5749..5797Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig114 5750..5797 +
1622815445.8188772-CDS-P-lacustris_contig114:8176..82721622815445.8188772-CDS-P-lacustris_contig114:8176..8272Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig114 8177..8272 +
1693493544.493577-CDS-P-lacustris_contig114:8176..82721693493544.493577-CDS-P-lacustris_contig114:8176..8272Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig114 8177..8272 +
1622815445.8320422-CDS-P-lacustris_contig114:8740..88631622815445.8320422-CDS-P-lacustris_contig114:8740..8863Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig114 8741..8863 +
1693493544.5026898-CDS-P-lacustris_contig114:8740..88631693493544.5026898-CDS-P-lacustris_contig114:8740..8863Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig114 8741..8863 +
1622815445.844213-CDS-P-lacustris_contig114:9596..97491622815445.844213-CDS-P-lacustris_contig114:9596..9749Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig114 9597..9749 +
1693493544.5120366-CDS-P-lacustris_contig114:9596..97491693493544.5120366-CDS-P-lacustris_contig114:9596..9749Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig114 9597..9749 +
1622815445.8566234-CDS-P-lacustris_contig114:10793..108701622815445.8566234-CDS-P-lacustris_contig114:10793..10870Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig114 10794..10870 +
1693493544.5217907-CDS-P-lacustris_contig114:10793..108701693493544.5217907-CDS-P-lacustris_contig114:10793..10870Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig114 10794..10870 +
1622815445.8665817-CDS-P-lacustris_contig114:11336..114181622815445.8665817-CDS-P-lacustris_contig114:11336..11418Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig114 11337..11418 +
1693493544.531515-CDS-P-lacustris_contig114:11336..114181693493544.531515-CDS-P-lacustris_contig114:11336..11418Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig114 11337..11418 +
1622815445.8770254-CDS-P-lacustris_contig114:12164..125391622815445.8770254-CDS-P-lacustris_contig114:12164..12539Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig114 12165..12539 +
1693493544.5412726-CDS-P-lacustris_contig114:12164..125391693493544.5412726-CDS-P-lacustris_contig114:12164..12539Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig114 12165..12539 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-lacustris_contig114.1100.1

>prot_P-lacustris_contig114.1100.1 ID=prot_P-lacustris_contig114.1100.1|Name=mRNA_P-lacustris_contig114.1100.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=318bp
MAQHWTDTYNKWSNWQDPDEVAKKREEEEKRARSYRENHMSCNHDRSAER
KVMDMPIEEKILACREFRHRGNLFHAEGQYRRGALQYRQALIYYDFCFPD
DESQQQELDEIHQACLLNSAACFLACGELDQTLNCCYQARALRAEPNNVK
ALYRRAVVYRLRDQFKEASVDLGRALAQRPNEVVLRKESAVLKSKIASYK
ERRRSMVANIFGKDQQQDRHQDRDQDQVDDDHTGDQGPLFPPKEQIESQI
PGGNDKTSPHWAEGDDPSIYSGPAAGRKETAGVYAVAATIGLTGLSGMSR
LSGRGEQEGKRRHDLELV
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mRNA from alignment at P-lacustris_contig114:5745..12539+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-lacustris_contig114.1100.1 ID=mRNA_P-lacustris_contig114.1100.1|Name=mRNA_P-lacustris_contig114.1100.1|organism=Pleurocladia lacustris SAG_25_93|type=mRNA|length=6795bp|location=Sequence derived from alignment at P-lacustris_contig114:5745..12539+ (Pleurocladia lacustris SAG_25_93)
CTACCATGGCACAGCACTGGACGGACACCTACAACAAATGGAGCAATTGG
CAGGTGTGTGGCGTGTGAGCCCTCCTGAGTGGCGAGACTTTCAGTCAGCA
CAGCCGTGCGCAGCAGAGCGCACTGATGTTTTATCCGCTCGGGGATCGGT
CCCTGTCGAACATGCTGTACCTAGCGATCCTACTAGTTGTGCGCGAAACG
GAAGGAGGTCTGCTATGTAGTGATACTACTTGTACTCGAGTACGTCTTTG
GGGTGTGTAGGATACAGTAGTATCCTGCAAGAAGGTCCAGTGGAGGGCTG
AAAGAGTAGAATGTATAACCTCTCTCGAGCAGGGAGTGGTCGTAATAAAA
CCCCTTAGTTTCAAAACAGGCTACAAAATTACTCTGTAGATTATCTTAAC
TCCTATCTCAATATCTTTCGATGTTGTGTGCAGGGTACAGGGCGCCACCA
CAGCAGAGATGTTGGGCGCATAGTTGAAAAGTCGAGATTTCGACTGTCAC
GAAACATGAGAACTGGACTGGAACTGGATTGGTACCCATACTAATCCTAT
GTATTTGTTGGTTTACCCCCGCTCATAATTGACTGAGTGAGGAAGCGTAC
TGTTTACCCAAGCTACCAATATTACTGTTGTTGTCTTTGGTTCATAGTAG
GAGAAATCGTACCCCAGGGTCGGTATGACGTCGGGTAATAATAAAGAAAC
CCGGGGTACGTGTTTGGATATACCTTTACTGTACCCTACGAAAATCACTT
CCTTGAACTATTTGTACCGTTCGCCACCATCCGCCGCAACTGAAGGAAGG
TCACCGGGTCGTGGTCGTGCCAGCATGCAGGACATAATGGCACATGTGCA
CAAACTATCTGCTGGTACAGGAGATGGTTGTGTACCGTATTCCCCCTCTT
TCCTCCCTCCTCTACATGGCGACCACCCCCCACACAATTTAGGCCGAAAC
AATTAAAGCTTGGATTTTGCCTCCGGGAAAAGGCGCAGAAGATGCCCCTC
TCTCCGATCGATTACCCCTGTAGTGTATTCCCTAGGAGTCCCACCCGTAG
CATCACCAATTTTTGTTGTTTAGGCACCACTGCGAAGCGAGGTACTCTGT
TCTTGGGCCCGAACGTTTTCTACGCCGTTTTCACTCGGCACTGAAGCAAT
GAACGGACTATGCAACTGCACATACACCGACGATTTTCCGAGTGCTTTTT
CGCATTGCTGGAGATGCTTTCGTTGCGAACCCCCCGCCCCATTTTGGCCG
AAAAGACGTGACAACTTTCATTTGATAAATACTTGGGTGTATTTCCCCCC
GGGGTCATTCTAAAAAATAAGGAAAAAAAGATCCCTCCTCTCCGGGAGAA
GCAGCGCGAATACGTTAGTGACATACTGAGTTTGCTGTGGGATGCAGTGA
ATAGTTACAATATAAATATAGTCTTGATGTGGGGCGTATTTCTTTCGTTG
TCATCACGCGAGCCCAATCAGCCTCTGGCGATGATTTGGAGTTCTTCCTC
CAAGTTGCTGGTACCCCACATTGTTGCCGTTGACACAAGACAAACCCGTT
CTGGTTCTGGTTCTGGTTCTGGTTCTGGAGTACTGACATTGAAACGTCCC
CAAACGTCAGGAAGGCACAGATTTTTTTCCGTGCGTCACAAGAAAACAAC
GTTTCCCCCAACGAGAAAGGTTAGGGTTTGCAAGTTACACACTACGTCAA
TGCGACAATGCGACCGAAGGATTGACCGATCGAGCCGGAAACGTTCGTTA
CCTGAGCCTAAGCCACCTCACCGCATAGACCACGGTACGTATTGCATGTC
CAGCATTCGTGAATTGTGCTCCACTGCACCCGGGCCGTGGACGTACGAGA
GTGTCGGGTATCATGTATCACGTATCAGGCATGAGGTATCTTCATGTATA
TGTACCATGTATCATGCGTTTTGGATGCGACAAGAGGACCTACCGGGGAG
GGAGGGAGGGGCGCTGTGAGGTCATAACCAAACAACTTAGTGACGTGATG
TGATGTCGCGTGACCTCACGTCATGGATACAAGACCCTACCCTACTTCAT
GTCGGTAGATCCACCGATATCCCATAGGTGAGGTACGAAAACATTGGATG
CACATTCAAGCTGCCGGAGCTGTTGATGCGTGAACGGCAACCTCTAGCTG
ATCGTTTAGACCGTACACAGAAGGATGTAGGCAGGGTAAACTAATTGTTG
AACTCGTACCACTCTCTAGGGCTTTCATCGAAAACGCGTGACAAAAACAA
TAGCTCGCTAGCACCACCGTAGCACAATGCCAGATGAACTCTCTCTCATC
ACGCGGTCACATCAGAAGTGCCACGCTCCCATCACTAGCCTGTATTTGTA
TATTATTGGACATACTCTGACATACAACCTCCCCCTATCCCCACACCTGC
CTGCTTGATGTTGATTATGATGCCAAGGATAGGATCCCGACGAAGTGGCC
AAGAAGCGAGAAGAGGAAGAAAAGCGTGCGAGGAGCTACCGCGAGAACCA
CATGTCGTGTAACCACGACCGCTCGGCAGTGAGTGTTTTTAGTGTTATTT
GGTCTACTGCTACTTCTGGTTCATGTTATTTCGTCCCTCACAACCGATGG
CGACCATTCAGCTCAACAGTATAGTATAGCCTCGCTCTCTCAATTGACCT
ACGATATGCAGGGGATAAATAGATATATCGATAGATACGTTGCACGTATC
TCCCTCGTGTCTTCATTAGGCGTCAACAGAAACGATGGCATGAATCTTGG
GGGCCAGCCAACCATTATAACCCTACCTCTCGTCCAACCATTATAACACT
ACCTCTCGTCCAACCATTATAACACTACCTCTCGTCCAACCATTATTACA
CTACCTCTCGTCCAACCATTATAACACTACCTCTCGTCCTTTCGAGTTTT
TCAGCACGAAATACAGCCGGCGATCAACTTGGCCGGTCATCAAACACTTG
GTGGTATCCTACCAATGTTTGACAAACCCTATCCCTAACCCATCAGGAAA
GGAAGGTGATGGACATGCCGATCGAGGAGAAGATTCTGGCATGCCGAGAA
TTCCGTCACAGGGGCAATCTTTTCCACGCAGAGGGCCAGTACCGACGAGG
GGCTCTGCAATACCGCCAGGTGATCGATCATCATCAGGTAGAGGGGCTCT
GCAATGCCGCCAGGTAGTCGATCATGATGAGGTAAAACGGCGTATTGGAC
ACTATTGTAAACCAGTATTGCTGTTGGAAGAACCCACACCCTTACACCTC
GCCTGGTAAAAATGGTCATCAATCGAGGTATGTGTAGCGCGGTATTACTG
CTGAAATGGTTAGTGCCACCTTCCATATGCATGCCTTTGTGCTTTCGCCG
CGGGCGATAGGAGCTCGTGTCCTTGAAATTATTGATTGCTGATTGTTCCC
TGGCGCGCATCAACGTGTTTCGGAGGTTGTCAGGATAGGCCAAGAAATGG
GGTGGGATGCCTCAACCAAGCTGACGAACGCCGATCACCCCTAAACTGAC
AATGGGTCATTCCTCCTTCGAAAATCGGCGGCATTGCCTTGTCTGGCTTC
ACCACCAAGCAGGCCCTGGCCGCCCTGAATTTCCGGTAGCATATGTACAT
GAAAAATCTAATCGCGCGGGTGCCACGTGTTCTAATCAAATGAAGGCCCA
GGCGCCTCCTTGTCCTAGAGTCTCCGATACCTGCTCGGATAGAGTATAGT
ATTTGAACATAACATGGGTGGTATCGTCCGTTTCTCGGTTTGTATTTTCT
GCGATGTACAGCGCGAGTAATGGTGTGATACAATACAATACGCTAAGTTC
AAACACCATTCTCCGCATCCCTGACCCCGGCGCCCTCGTTGCGGACTGGC
AGGCGTTGATTTACTATGACTTTTGCTTTCCTGACGACGAGTCACAACAG
CAGGAGTTAGACGAAATCCACCAGGCGTGTCTCCTCAACTCTGCGGCATG
TTTTTTGGCCTGTGGAGAACTCGATCAGACCCTGAACTGCTGCTACCAGG
CGAGGGTTAGCGTTGCGTTGCGTTGCTTTCTCCTTTGTTTCCAATTTTAT
CTTTTCTTGCACATAGGTCGATATCTTGCATTTTGTGATGTGTTTGGGCC
GATCTTGCGACCAGAGGCAGCGACACACATCTCAATATGGCGTCGATGTG
CTCGACGTTTAATTTTCGAAGGTCGCGGCTTCCGTTCTTCAATGTGTTTG
GACTTTGGACACCCTCTCAACAAGCGGTTGTGCTTTGTCGTTTGAAACGA
CTTGTTGTGCGGATGCCGTTGCCGCCACGTCCTGCTTTGCTATGCTACAG
CAAATTTATTCCAACTTGATGATTTTGGTATACCTCGCTCCTCGGCCTTG
TTCTGCTTCAGAGACGCGTAACTTCGAATATCAATATTGGTTCGGTTTTC
TGGGGTCGAAGAGAGAGAGAGAGAGAGAGAGACGCGTTGTCATTCACGAC
ATGATTCCACTGCCTCGCTGCTACGTCAGCAGGGTTGTAGTTGGGATCGA
TAGGCGCGTGTAGCCTGGATTCGAGTTCAAGTGGCGAGCAACACAACTCG
TAAGGGAAGGGAAGCAGTGCATGCACCTTTTCGTAGCAGCGATAGTGTAG
TGGTGATAATTGTAAGTTAGGATACCACAGAGGCGTGTGTGCTGTGTAAT
GGAATGGTATGGCGGGGCTGGTGTCGTGTTGGCGAAAATCTCCCTGCGTA
GGCCACGCGAAATATCAGTGGACAACGGGCCACAACAGGATTCACGTACC
CTGTCGTTTCTAGGCCCAATCAGGGTAAAACCTAAATCGACGTTAGCCAG
TCCCAAATAGAGCCAGCCAGCCTGATATGATTCTGATTGACCAAGGCACA
CCTACACCTGCTACCTCCTCCACATTGGAGTCGGAGGGTATGCCCTCCGA
AGGCCTAGTGCTGTGCTGTGCCGTGTTGTGTTCGCGTACTGTGTGGCCTT
GTCAGTGTTGAAGTGGCTGTAGAACAGCGAACATGCTCGGTGAACTAAAC
TGCCGTTGCTTTGAACTCTCTAACCTTAGCCCTAACCTTCCTTTACCAGG
CTTTGAGGGCGGAGCCGAACAACGTGAAGGCCTTGTATCGCCGTGCCGTG
GTGTATCGCTTGCGTGATCAGTTCAAGTGAGTGTTCTCATAGGCAGTTTT
CATGGAAGCGTTGTGGCGTCAACCGTGTCGTTCCGCGGCGGCATTGCAAC
CATAGAGGGTATCCTGATGCCCGAAAAAAAAAAGGCCCACTGTGTAGCAA
GCAGATGCCGTAGGTTGCCCCGCGCCCCCCGAACCGTGATAGATGGTAAA
CGTATTACACGGGGTGAGGTAGGACAACGTCGAGTTCTCTTGTCTCCTCA
GGAACAAAAAAACGCCAACATGGGCCTTTTTTTCTTATTTAGGTATGACA
GATTCACCCAAACGCCACGCCCCCCATTGAAATAGGCGCTTTGATTCTCT
GCGATCGAGCTTCAACGAAAATTCTTTTCAATCCATTCTGGAAAAAAAGA
GAAGAGTTTTATGACCTGCACAGCTGTCTTTTTATCCCGTGATTTAGCCC
CCGCGCCCCCCCCCGCGAACCCATTGTCGTATCGTTTTGTAGGGAGGCGT
CTGTTGATCTCGGGAGAGCGCTGGCGCAGCGGCCGAATGAAGTCGTGCTC
CGCAAGGAAAGCGCCGTGCTCAAGGTGAGGTGCGGTAGTCCAGTAGAGGG
TTGCCTCTGGGTTGAATAAAAAAAGCGTCACCCATGTAGTTTTTTTTTCA
CAATCATTATTATTTTATAATCGTTATTATTCCATTGTCGTTATTGTTAC
ATCCCATGACCGACTGAACGAAGAGGTAAGCAGTACAAGAACGAATACGG
CCATCGTACACGAAGGGTGGTGTATGGTGTATACTTCGAATTATGGTGTT
TGGGGCTGTGAGCCTCGCTCGTGTTTTGACGTACATTGTTCTTGCTTGAA
TGTGCTTTCATCGCGGATTAACGGTTGCGTCCCTTGCCGGAGTAGAGCGC
ACAATCTTGTTCTCTATATATTGCTACATTTCGCGTGTGAGTAACCCTAA
CCCCCGTGCACTCAAGCTTGGGGTGTTCTAGGACGGGTGTGGATGTAATG
TGTTGTCATGTCATGCTATGATTGAAACACGCAAGCCTGTCTTCACCTTC
GCGGAGAGACTTTTGGTGGTCGACACCGTCATATCCCTTTTTGACGAGGA
CATTTTGTGAGGACAAACTTGTTGGATAGTAAACATTGAATCTTGGTTAA
TGCACTGTGATACAGGATCAACCGTTCCTCAAACGATTCTGACTCCGCCT
TCCCTTGGGAATCTGTTGAAGGAACTGACCCGATGCGCCCTACTTGTCTC
CTCCTATGATTGACAATGATGCGCACCGTTTCCTTCCATGAAACAAAAAA
CAATCATGCTTTTACTTTAGAGCAAGATAGCCTCCTACAAAGAGCGGCGA
AGATCGATGGTAGCCAATATTTTTGGGAAGGACCAGCAGCAGGATCGTCA
TCAGGATCGGGATCAGGATCAGGTTGACGATGACCATACCGGCGACCAAG
GACCGTTATTTCCTCCGAAGGAGCAAATCGAATCACAAATCCCAGGAGGA
AACGACAAAACATCACCCCACTGGGCAGAAGGTGATGACCCCTCAATTTA
CTCGGGACCGGCAGCTGGGAGGAAAGAGACGGCAGGCGTGTACGCGGTGG
CGGCTACCATTGGTCTCACGGGATTATCTGGAATGTCTAGATTATCTGGT
AGAGGCGAACAGGAAGGCAAGCGACGGCACGATCTCGAATTGGTG
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Coding sequence (CDS) from alignment at P-lacustris_contig114:5745..12539+

>mRNA_P-lacustris_contig114.1100.1 ID=mRNA_P-lacustris_contig114.1100.1|Name=mRNA_P-lacustris_contig114.1100.1|organism=Pleurocladia lacustris SAG_25_93|type=CDS|length=1908bp|location=Sequence derived from alignment at P-lacustris_contig114:5745..12539+ (Pleurocladia lacustris SAG_25_93)
ATGGCACAGCACTGGACGGACACCTACAACAAATGGAGCAATTGGCAGAT
GGCACAGCACTGGACGGACACCTACAACAAATGGAGCAATTGGCAGGATC
CCGACGAAGTGGCCAAGAAGCGAGAAGAGGAAGAAAAGCGTGCGAGGAGC
TACCGCGAGAACCACATGTCGTGTAACCACGACCGCTCGGCAGATCCCGA
CGAAGTGGCCAAGAAGCGAGAAGAGGAAGAAAAGCGTGCGAGGAGCTACC
GCGAGAACCACATGTCGTGTAACCACGACCGCTCGGCAGAAAGGAAGGTG
ATGGACATGCCGATCGAGGAGAAGATTCTGGCATGCCGAGAATTCCGTCA
CAGGGGCAATCTTTTCCACGCAGAGGGCCAGTACCGACGAGGGGCTCTGC
AATACCGCCAGGAAAGGAAGGTGATGGACATGCCGATCGAGGAGAAGATT
CTGGCATGCCGAGAATTCCGTCACAGGGGCAATCTTTTCCACGCAGAGGG
CCAGTACCGACGAGGGGCTCTGCAATACCGCCAGGCGTTGATTTACTATG
ACTTTTGCTTTCCTGACGACGAGTCACAACAGCAGGAGTTAGACGAAATC
CACCAGGCGTGTCTCCTCAACTCTGCGGCATGTTTTTTGGCCTGTGGAGA
ACTCGATCAGACCCTGAACTGCTGCTACCAGGCGAGGGCGTTGATTTACT
ATGACTTTTGCTTTCCTGACGACGAGTCACAACAGCAGGAGTTAGACGAA
ATCCACCAGGCGTGTCTCCTCAACTCTGCGGCATGTTTTTTGGCCTGTGG
AGAACTCGATCAGACCCTGAACTGCTGCTACCAGGCGAGGGCTTTGAGGG
CGGAGCCGAACAACGTGAAGGCCTTGTATCGCCGTGCCGTGGTGTATCGC
TTGCGTGATCAGTTCAAGCTTTGAGGGCGGAGCCGAACAACGTGAAGGCC
TTGTATCGCCGTGCCGTGGTGTATCGCTTGCGTGATCAGTTCAAGGAGGC
GTCTGTTGATCTCGGGAGAGCGCTGGCGCAGCGGCCGAATGAAGTCGTGC
TCCGCAAGGAAAGCGCCGTGCTCAAGGGAGGCGTCTGTTGATCTCGGGAG
AGCGCTGGCGCAGCGGCCGAATGAAGTCGTGCTCCGCAAGGAAAGCGCCG
TGCTCAAGAGCAAGATAGCCTCCTACAAAGAGCGGCGAAGATCGATGGTA
GCCAATATTTTTGGGAAGGACCAGCAGCAGGATCGTCATCAGGATCGGGA
TCAGGATCAGGTTGACGATGACCATACCGGCGACCAAGGACCGTTATTTC
CTCCGAAGGAGCAAATCGAATCACAAATCCCAGGAGGAAACGACAAAACA
TCACCCCACTGGGCAGAAGGTGATGACCCCTCAATTTACTCGGGACCGGC
AGCTGGGAGGAAAGAGACGGCAGGCGTGTACGCGGTGGCGGCTACCATTG
GTCTCACGGGATTATCTGGAATGTCTAGATTATCTGGTAGAGGCGAACAG
GAAGGCAAGCGACGGCACGATCTCGAATTGGTGAGCAAGATAGCCTCCTA
CAAAGAGCGGCGAAGATCGATGGTAGCCAATATTTTTGGGAAGGACCAGC
AGCAGGATCGTCATCAGGATCGGGATCAGGATCAGGTTGACGATGACCAT
ACCGGCGACCAAGGACCGTTATTTCCTCCGAAGGAGCAAATCGAATCACA
AATCCCAGGAGGAAACGACAAAACATCACCCCACTGGGCAGAAGGTGATG
ACCCCTCAATTTACTCGGGACCGGCAGCTGGGAGGAAAGAGACGGCAGGC
GTGTACGCGGTGGCGGCTACCATTGGTCTCACGGGATTATCTGGAATGTC
TAGATTATCTGGTAGAGGCGAACAGGAAGGCAAGCGACGGCACGATCTCG
AATTGGTG
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