mRNA_P-lacustris_contig1139.1095.1 (mRNA) Pleurocladia lacustris SAG_25_93
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Overview
Homology
BLAST of mRNA_P-lacustris_contig1139.1095.1 vs. uniprot
Match: D8LIS9_ECTSI (Branched chain amino acid aminotransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LIS9_ECTSI) HSP 1 Score: 608 bits (1567), Expect = 4.510e-202 Identity = 291/329 (88.45%), Postives = 313/329 (95.14%), Query Frame = 3
Query: 24 KQGNKEAEVYVRPPTTTKLMVPKGGKLLDDGTVRINVWATPRSLSTALMYSFAQRPDCIVYDEPLYAHFLRTHPEEETWRPYREKVFKEQDSDGDRWIREVALGSTPKPVVYMKHMAKQMRNLDLSFLPKCRNILQIRTPIHMLPSWDSNIHANLKEIGMLELLHLYSLVRAMGQEPVVIDAELLLANPEGVLREVSEMIGIPYAPEQLSWEAGPKPYDGCWAYVWYKGVRQSTCFDNSPRYVKFDQNLAPLMEECMPIYQLLRSKAITGFGKLGKVQRPLAKEAVNAARDEKAESAAAGNDDILVWVGGGLVPRDMAKVSVFDSSVQG 1010
KQ +K++E YVRP TTTKL VP+GG+LL DGTVRINVWA+PRSLSTALMYSFAQRPDC+VYDEPLYAHFLRTHPE+ETWRPYR++VF+EQDSDGDRWI+EVALG TPKPVVYMKHMAKQMRNLDLSFLPKCRNI+QIRTPIHMLPSW++NIHANLKEIGML+LLH+YSLVRAMGQEP+VIDAELL ANPEGVLREVSEM GIPYAPEQLSWEAGPKPYDGCWAYVWYKG R+STCFDNSPRYVKFDQNLAPL+EECMPIYQLLRSKAITGFGKLGKVQRPL EA +AARD KAE AAA N+ ILVWVGGGLVPRDMAKVSVFDSSVQG
Sbjct: 14 KQDDKDSEEYVRPSTTTKLEVPEGGELLKDGTVRINVWASPRSLSTALMYSFAQRPDCVVYDEPLYAHFLRTHPEDETWRPYRDEVFREQDSDGDRWIKEVALGPTPKPVVYMKHMAKQMRNLDLSFLPKCRNIIQIRTPIHMLPSWNTNIHANLKEIGMLDLLHMYSLVRAMGQEPIVIDAELLRANPEGVLREVSEMAGIPYAPEQLSWEAGPKPYDGCWAYVWYKGCRKSTCFDNSPRYVKFDQNLAPLLEECMPIYQLLRSKAITGFGKLGKVQRPLPAEAGSAARDAKAEGAAAVNEGILVWVGGGLVPRDMAKVSVFDSSVQG 342
BLAST of mRNA_P-lacustris_contig1139.1095.1 vs. uniprot
Match: A0A8J5XF99_DIALT (Uncharacterized protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XF99_DIALT) HSP 1 Score: 248 bits (632), Expect = 4.860e-67 Identity = 120/182 (65.93%), Postives = 148/182 (81.32%), Query Frame = 1
Query: 1039 QGRIFCLDRHLRRLQDSAHALAFKAIPSSDDITVAIMATLAANNMVDGAHARVTLTRGTKATSSMNPDFNVFGCTLIVLAERKKVGGAATYDNDLGMTLITATNRRNPPQCLDSAIHHNNLINNILPKIQANLAGAADAVMLDMEGFVSETNATNIFMVKRGKLMTPATGSCLPGITRSLIL 1584
+G++F +RHLRRL DSA AL F+ + S + A++ TLAAN M DGAH R+TLTRG K TSSMNP FN +GCTLIVLAE K V G ATYDN G++L+TA NRRNPP C+DS IHHNNLINNILPKIQANLAGAADA+MLD++GFV+ETNATN+F+VK G+L+TP+ +CLPG+TR ++
Sbjct: 333 RGKVFKFERHLRRLYDSAKALNFQNVHSPAQVREAVLQTLAANGMRDGAHIRLTLTRGVKTTSSMNPLFNAYGCTLIVLAEWKPVVGVATYDNAAGVSLVTAANRRNPPSCIDSKIHHNNLINNILPKIQANLAGAADALMLDLDGFVAETNATNVFVVKDGRLLTPSADACLPGVTREAVM 514
BLAST of mRNA_P-lacustris_contig1139.1095.1 vs. uniprot
Match: A0A7S2SSM2_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SSM2_9STRA) HSP 1 Score: 243 bits (621), Expect = 3.150e-65 Identity = 119/181 (65.75%), Postives = 146/181 (80.66%), Query Frame = 1
Query: 1042 GRIFCLDRHLRRLQDSAHALAFKAIPSSDDITVAIMATLAANNMVDGAHARVTLTRGTKATSSMNPDFNVFGCTLIVLAERKKVGGAATYDNDLGMTLITATNRRNPPQCLDSAIHHNNLINNILPKIQANLAGAADAVMLDMEGFVSETNATNIFMVKRGKLMTPATGSCLPGITRSLIL 1584
G++F L++HL RL SA ALAF+ +P++++I A+ TLAANNM DG H R+TLTRG K TSSMNP FNVFG TLIVLAE K V ATYDN G+ LITATNRRNPP CLDS IHHNNL+NNILPKIQAN+AGA+DA+MLD++GFV+ETNATN+F V+ ++TP +CLPG+TR LI+
Sbjct: 348 GKVFMLEKHLERLYASARALAFRNVPTAEEIRRALFTTLAANNMRDGVHVRLTLTRGEKTTSSMNPAFNVFGTTLIVLAEWKPVQSIATYDNANGIKLITATNRRNPPSCLDSKIHHNNLLNNILPKIQANVAGASDAIMLDLDGFVAETNATNLFAVRNETVLTPTADACLPGVTRGLII 528
BLAST of mRNA_P-lacustris_contig1139.1095.1 vs. uniprot
Match: A0A6U4DSS2_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4DSS2_9STRA) HSP 1 Score: 238 bits (606), Expect = 4.120e-65 Identity = 122/182 (67.03%), Postives = 142/182 (78.02%), Query Frame = 1
Query: 1042 GRIFCLDRHLRRLQDSAHALAFKAIPSSDDITVAIMATLAANNMVDGAHARVTLTRGTKATSSMNPDFNVFGCTLIVLAERKKVGGAATYDNDLGMTLITATNRRNPPQCLDSAIHHNNLINNILPKIQANLAGAADAVMLDMEGFVSETNATNIFMVKRGKLMTPATGSCLPGITRSLILR 1587
GRIF + HL RL DSA A+ FK + +++ A++ TLAAN M DG H R+TLTRG K TSSMNP FNVFG TLIVLAE K V ATYDN G++LITAT RRNPP C+DS IHHNNLINNILPKIQANLAGAADA+MLD+ GFV+ETNATN+F+VKRG + TP +CLPGITR +LR
Sbjct: 184 GRIFKFEAHLDRLFDSARAMDFKDCHTREEVRDAVIETLAANGMRDGVHIRLTLTRGEKTTSSMNPMFNVFGTTLIVLAEWKPVVSVATYDNKKGVSLITATQRRNPPMCVDSKIHHNNLINNILPKIQANLAGAADALMLDIHGFVAETNATNVFLVKRGAVHTPTGDACLPGITRGTVLR 365
BLAST of mRNA_P-lacustris_contig1139.1095.1 vs. uniprot
Match: A0A7S2UVM1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UVM1_9STRA) HSP 1 Score: 231 bits (589), Expect = 4.520e-65 Identity = 117/182 (64.29%), Postives = 140/182 (76.92%), Query Frame = 1
Query: 1039 QGRIFCLDRHLRRLQDSAHALAFKAIPSSDDITVAIMATLAANNMVDGAHARVTLTRGTKATSSMNPDFNVFGCTLIVLAERKKVGGAATYDNDLGMTLITATNRRNPPQCLDSAIHHNNLINNILPKIQANLAGAADAVMLDMEGFVSETNATNIFMVKRGKLMTPATGSCLPGITRSLIL 1584
+G+I L+RHLRRL SA A+ F + S ++I AI LAAN M DGAH R+TLTRG K+TSSMNP FNV+G TLI+L E K GA TYDN G++LITA NRRNPP +DS IHHNNLINNILPK+QANLAGAADA+MLD++GFVSETNATN+F+V G L+TP CLPGITR ++
Sbjct: 7 RGKILSLERHLRRLFKSARAMGFANVHSKEEIIDAIFQVLAANGMRDGAHMRLTLTRGEKSTSSMNPKFNVYGTTLIILPEWKPTEGATTYDNAKGVSLITAANRRNPPSTVDSKIHHNNLINNILPKLQANLAGAADAIMLDLDGFVSETNATNLFIVDDGVLLTPHADHCLPGITRQTVI 188
BLAST of mRNA_P-lacustris_contig1139.1095.1 vs. uniprot
Match: A0A7S2YA45_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YA45_9STRA) HSP 1 Score: 231 bits (589), Expect = 1.310e-64 Identity = 118/182 (64.84%), Postives = 140/182 (76.92%), Query Frame = 1
Query: 1039 QGRIFCLDRHLRRLQDSAHALAFKAIPSSDDITVAIMATLAANNMVDGAHARVTLTRGTKATSSMNPDFNVFGCTLIVLAERKKVGGAATYDNDLGMTLITATNRRNPPQCLDSAIHHNNLINNILPKIQANLAGAADAVMLDMEGFVSETNATNIFMVKRGKLMTPATGSCLPGITRSLIL 1584
+G+I L++HLRRL SA AL F+ + + ++IT AI TLAAN M D AH R+TLTRG K TSSMNP FNV+G TLI+L E K GA TYDN G++LIT++ RRN PQ LDS IHHNN+INNILPKIQANLAG DAVMLD++GFVSETNATNIFMV G L+TP CLPGITR+ +L
Sbjct: 37 RGKILSLEKHLRRLSKSAKALGFENVHTKEEITEAIFRTLAANGMRDSAHMRLTLTRGEKCTSSMNPKFNVYGTTLIILPEWKPTEGATTYDNTAGISLITSSQRRNSPQVLDSKIHHNNMINNILPKIQANLAGCEDAVMLDLDGFVSETNATNIFMVDDGVLLTPHADHCLPGITRATVL 218
BLAST of mRNA_P-lacustris_contig1139.1095.1 vs. uniprot
Match: A0A7S0STR7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0STR7_9STRA) HSP 1 Score: 227 bits (578), Expect = 9.430e-64 Identity = 117/181 (64.64%), Postives = 136/181 (75.14%), Query Frame = 1
Query: 1045 RIFCLDRHLRRLQDSAHALAFKAIPSSDDITVAIMATLAANNMVDGAHARVTLTRGTKATSSMNPDFNVFGCTLIVLAERKKVGGAATYDNDLGMTLITATNRRNPPQCLDSAIHHNNLINNILPKIQANLAGAADAVMLDMEGFVSETNATNIFMVKRGKLMTPATGSCLPGITRSLILR 1587
RIF LD H+ RL SA A+ F IPS I AI+ TL NNM+D H R+TLTRG K TSSMNP FN+FGC L+V+ E KKV TY+N LG++LIT+ RRN PQC+DS IHHNNLINNILPKIQAN A AADA+MLD+EGFVSETNATNIFMVK G + TP SCLPGITR +++
Sbjct: 1 RIFMLDEHINRLIHSAIAMHFTDIPSRSFIINAIVTTLLTNNMLDNCHIRLTLTRGPKVTSSMNPKFNIFGCNLLVVPEWKKVEDITTYNNQLGISLITSCIRRNSPQCVDSKIHHNNLINNILPKIQANNANAADALMLDLEGFVSETNATNIFMVKDGVVYTPFADSCLPGITRQTVIK 181
BLAST of mRNA_P-lacustris_contig1139.1095.1 vs. uniprot
Match: A0A7S1TU62_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TU62_9STRA) HSP 1 Score: 238 bits (606), Expect = 2.960e-63 Identity = 122/182 (67.03%), Postives = 142/182 (78.02%), Query Frame = 1
Query: 1042 GRIFCLDRHLRRLQDSAHALAFKAIPSSDDITVAIMATLAANNMVDGAHARVTLTRGTKATSSMNPDFNVFGCTLIVLAERKKVGGAATYDNDLGMTLITATNRRNPPQCLDSAIHHNNLINNILPKIQANLAGAADAVMLDMEGFVSETNATNIFMVKRGKLMTPATGSCLPGITRSLILR 1587
GRIF + HL RL DSA A+ FK + +++ A++ TLAAN M DG H R+TLTRG K TSSMNP FNVFG TLIVLAE K V ATYDN G++LITAT RRNPP C+DS IHHNNLINNILPKIQANLAGAADA+MLD+ GFV+ETNATN+F+VKRG + TP +CLPGITR +LR
Sbjct: 366 GRIFKFEAHLDRLFDSARAMDFKDCHTREEVRDAVIETLAANGMRDGVHIRLTLTRGEKTTSSMNPMFNVFGTTLIVLAEWKPVVSVATYDNKKGVSLITATQRRNPPMCVDSKIHHNNLINNILPKIQANLAGAADALMLDIHGFVAETNATNVFLVKRGAVHTPTGDACLPGITRGTVLR 547
BLAST of mRNA_P-lacustris_contig1139.1095.1 vs. uniprot
Match: A0A4Y7LAH3_PAPSO (Uncharacterized protein n=3 Tax=Papaver somniferum TaxID=3469 RepID=A0A4Y7LAH3_PAPSO) HSP 1 Score: 235 bits (600), Expect = 3.950e-63 Identity = 135/297 (45.45%), Postives = 176/297 (59.26%), Query Frame = 3
Query: 126 INVWATPRSLSTALMYSFAQRPDCIVYDEPLYAHFLRTHPEEETWRPYREKVFKEQDSDGDRWIREVALGSTPKPVVYMKHMAKQ-MRNLDLSFLPKCRNILQIRTPIHMLPSWDSNIHANLKEIGMLELLHLYSLVRAMGQEPVVIDAELLLANPEGVLREVSEMIGIPYAPEQLSWEAGPKPYDGCWAYVWYKGVRQSTCFDNSPRY-VKFDQNLAPLMEECMPIYQLLRSKAITGFGKLGKVQRPLAKEAVNAARDEKAESAAAGNDDILVWVGGGLVPRDMAKVSVFDSSVQG 1010
I+ W+ PRSLST+LMYSF+QR D V DEPLYAHFLR E RPYR++V + DSDG+R + E+ G K + KH+ KQ + L + K ++ + IR P+++LPS+D + + E+G+ EL+ +YS + +G P +IDAE L +PE VLR + E +GIP+ P L WEAGPKP DG WA WYK V +STCF Y +L L+EE +P Y +LR K +G PL V A ND ILVWVG +VPRD AKVSVFDS VQG
Sbjct: 10 IHSWSAPRSLSTSLMYSFSQRDDIEVLDEPLYAHFLRVTGAE---RPYRDEVLLKMDSDGNRVVEEMIFGPGEKRYRFCKHIGKQRVPGLSSDLMKKGKHFILIRNPLNILPSFDKVVPPSFLELGLAELVSIYSELSDLGTVPPIIDAEDLQQDPEAVLRGLCEDLGIPFQPAVLKWEAGPKPVDGLWAPWWYKSVHKSTCFKAVKEYPTPLPPSLYDLLEESLPFYNMLRKKTRRTCSVIGP-SLPLPPLPVPA------------NDKILVWVGNEIVPRDSAKVSVFDSVVQG 290
BLAST of mRNA_P-lacustris_contig1139.1095.1 vs. uniprot
Match: A0A7S1URX8_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1URX8_9STRA) HSP 1 Score: 231 bits (590), Expect = 1.770e-61 Identity = 126/201 (62.69%), Postives = 149/201 (74.13%), Query Frame = 1
Query: 1039 QGRIFCLDRHLRRLQDSAHALAF---KAIPSSDDITVAIMATLAANNMVDGAHARVTLTRGTKATSSMNPDFNVFGCTLIVLAERKK-VGGAATYDNDLGMTLITATNRRNPPQCLDSAIHHNNLINNILPKIQANLAGAADAVMLDMEGFVSETNATNIFMVKR-GKLMTPATGSCLPGITRSLILRWQPSSAFPRRRRR 1626
+G+I L++HL RL +SA AL F + +IT AI TLAAN M DGAH R+TL+RG K TSSMNP FN++G TLIVLAE K VGGA TYDN G+TLI+A+ RRNPPQC+DS IHHNN+INNILPKIQANLAGAADA+MLD++GFVSETNATNIFMV GKL+TP CLPGITR+ ++ P RR
Sbjct: 324 RGKILSLEKHLTRLMNSAKALGFGMNSRCHTRPEITEAIFRTLAANGMRDGAHMRLTLSRGIKTTSSMNPKFNIYGTTLIVLAEWKPTVGGATTYDNTKGITLISASQRRNPPQCVDSKIHHNNMINNILPKIQANLAGAADAIMLDVDGFVSETNATNIFMVDHTGKLLTPHADHCLPGITRATVMELARELDIPAEERR 524 The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig1139.1095.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-lacustris_contig1139.1095.1 >prot_P-lacustris_contig1139.1095.1 ID=prot_P-lacustris_contig1139.1095.1|Name=mRNA_P-lacustris_contig1139.1095.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=371bp MVPKGGKLLDDGTVRINVWATPRSLSTALMYSFAQRPDCIVYDEPLYAHFback to top mRNA from alignment at P-lacustris_contig1139:17820..34066+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-lacustris_contig1139.1095.1 ID=mRNA_P-lacustris_contig1139.1095.1|Name=mRNA_P-lacustris_contig1139.1095.1|organism=Pleurocladia lacustris SAG_25_93|type=mRNA|length=16247bp|location=Sequence derived from alignment at P-lacustris_contig1139:17820..34066+ (Pleurocladia lacustris SAG_25_93)back to top Coding sequence (CDS) from alignment at P-lacustris_contig1139:17820..34066+ >mRNA_P-lacustris_contig1139.1095.1 ID=mRNA_P-lacustris_contig1139.1095.1|Name=mRNA_P-lacustris_contig1139.1095.1|organism=Pleurocladia lacustris SAG_25_93|type=CDS|length=2226bp|location=Sequence derived from alignment at P-lacustris_contig1139:17820..34066+ (Pleurocladia lacustris SAG_25_93)back to top |