mRNA_P-lacustris_contig1139.1095.1 (mRNA) Pleurocladia lacustris SAG_25_93

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-lacustris_contig1139.1095.1
Unique NamemRNA_P-lacustris_contig1139.1095.1
TypemRNA
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Homology
BLAST of mRNA_P-lacustris_contig1139.1095.1 vs. uniprot
Match: D8LIS9_ECTSI (Branched chain amino acid aminotransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LIS9_ECTSI)

HSP 1 Score: 608 bits (1567), Expect = 4.510e-202
Identity = 291/329 (88.45%), Postives = 313/329 (95.14%), Query Frame = 3
Query:   24 KQGNKEAEVYVRPPTTTKLMVPKGGKLLDDGTVRINVWATPRSLSTALMYSFAQRPDCIVYDEPLYAHFLRTHPEEETWRPYREKVFKEQDSDGDRWIREVALGSTPKPVVYMKHMAKQMRNLDLSFLPKCRNILQIRTPIHMLPSWDSNIHANLKEIGMLELLHLYSLVRAMGQEPVVIDAELLLANPEGVLREVSEMIGIPYAPEQLSWEAGPKPYDGCWAYVWYKGVRQSTCFDNSPRYVKFDQNLAPLMEECMPIYQLLRSKAITGFGKLGKVQRPLAKEAVNAARDEKAESAAAGNDDILVWVGGGLVPRDMAKVSVFDSSVQG 1010
            KQ +K++E YVRP TTTKL VP+GG+LL DGTVRINVWA+PRSLSTALMYSFAQRPDC+VYDEPLYAHFLRTHPE+ETWRPYR++VF+EQDSDGDRWI+EVALG TPKPVVYMKHMAKQMRNLDLSFLPKCRNI+QIRTPIHMLPSW++NIHANLKEIGML+LLH+YSLVRAMGQEP+VIDAELL ANPEGVLREVSEM GIPYAPEQLSWEAGPKPYDGCWAYVWYKG R+STCFDNSPRYVKFDQNLAPL+EECMPIYQLLRSKAITGFGKLGKVQRPL  EA +AARD KAE AAA N+ ILVWVGGGLVPRDMAKVSVFDSSVQG
Sbjct:   14 KQDDKDSEEYVRPSTTTKLEVPEGGELLKDGTVRINVWASPRSLSTALMYSFAQRPDCVVYDEPLYAHFLRTHPEDETWRPYRDEVFREQDSDGDRWIKEVALGPTPKPVVYMKHMAKQMRNLDLSFLPKCRNIIQIRTPIHMLPSWNTNIHANLKEIGMLDLLHMYSLVRAMGQEPIVIDAELLRANPEGVLREVSEMAGIPYAPEQLSWEAGPKPYDGCWAYVWYKGCRKSTCFDNSPRYVKFDQNLAPLLEECMPIYQLLRSKAITGFGKLGKVQRPLPAEAGSAARDAKAEGAAAVNEGILVWVGGGLVPRDMAKVSVFDSSVQG 342          
BLAST of mRNA_P-lacustris_contig1139.1095.1 vs. uniprot
Match: A0A8J5XF99_DIALT (Uncharacterized protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XF99_DIALT)

HSP 1 Score: 248 bits (632), Expect = 4.860e-67
Identity = 120/182 (65.93%), Postives = 148/182 (81.32%), Query Frame = 1
Query: 1039 QGRIFCLDRHLRRLQDSAHALAFKAIPSSDDITVAIMATLAANNMVDGAHARVTLTRGTKATSSMNPDFNVFGCTLIVLAERKKVGGAATYDNDLGMTLITATNRRNPPQCLDSAIHHNNLINNILPKIQANLAGAADAVMLDMEGFVSETNATNIFMVKRGKLMTPATGSCLPGITRSLIL 1584
            +G++F  +RHLRRL DSA AL F+ + S   +  A++ TLAAN M DGAH R+TLTRG K TSSMNP FN +GCTLIVLAE K V G ATYDN  G++L+TA NRRNPP C+DS IHHNNLINNILPKIQANLAGAADA+MLD++GFV+ETNATN+F+VK G+L+TP+  +CLPG+TR  ++
Sbjct:  333 RGKVFKFERHLRRLYDSAKALNFQNVHSPAQVREAVLQTLAANGMRDGAHIRLTLTRGVKTTSSMNPLFNAYGCTLIVLAEWKPVVGVATYDNAAGVSLVTAANRRNPPSCIDSKIHHNNLINNILPKIQANLAGAADALMLDLDGFVAETNATNVFVVKDGRLLTPSADACLPGVTREAVM 514          
BLAST of mRNA_P-lacustris_contig1139.1095.1 vs. uniprot
Match: A0A7S2SSM2_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SSM2_9STRA)

HSP 1 Score: 243 bits (621), Expect = 3.150e-65
Identity = 119/181 (65.75%), Postives = 146/181 (80.66%), Query Frame = 1
Query: 1042 GRIFCLDRHLRRLQDSAHALAFKAIPSSDDITVAIMATLAANNMVDGAHARVTLTRGTKATSSMNPDFNVFGCTLIVLAERKKVGGAATYDNDLGMTLITATNRRNPPQCLDSAIHHNNLINNILPKIQANLAGAADAVMLDMEGFVSETNATNIFMVKRGKLMTPATGSCLPGITRSLIL 1584
            G++F L++HL RL  SA ALAF+ +P++++I  A+  TLAANNM DG H R+TLTRG K TSSMNP FNVFG TLIVLAE K V   ATYDN  G+ LITATNRRNPP CLDS IHHNNL+NNILPKIQAN+AGA+DA+MLD++GFV+ETNATN+F V+   ++TP   +CLPG+TR LI+
Sbjct:  348 GKVFMLEKHLERLYASARALAFRNVPTAEEIRRALFTTLAANNMRDGVHVRLTLTRGEKTTSSMNPAFNVFGTTLIVLAEWKPVQSIATYDNANGIKLITATNRRNPPSCLDSKIHHNNLLNNILPKIQANVAGASDAIMLDLDGFVAETNATNLFAVRNETVLTPTADACLPGVTRGLII 528          
BLAST of mRNA_P-lacustris_contig1139.1095.1 vs. uniprot
Match: A0A6U4DSS2_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4DSS2_9STRA)

HSP 1 Score: 238 bits (606), Expect = 4.120e-65
Identity = 122/182 (67.03%), Postives = 142/182 (78.02%), Query Frame = 1
Query: 1042 GRIFCLDRHLRRLQDSAHALAFKAIPSSDDITVAIMATLAANNMVDGAHARVTLTRGTKATSSMNPDFNVFGCTLIVLAERKKVGGAATYDNDLGMTLITATNRRNPPQCLDSAIHHNNLINNILPKIQANLAGAADAVMLDMEGFVSETNATNIFMVKRGKLMTPATGSCLPGITRSLILR 1587
            GRIF  + HL RL DSA A+ FK   + +++  A++ TLAAN M DG H R+TLTRG K TSSMNP FNVFG TLIVLAE K V   ATYDN  G++LITAT RRNPP C+DS IHHNNLINNILPKIQANLAGAADA+MLD+ GFV+ETNATN+F+VKRG + TP   +CLPGITR  +LR
Sbjct:  184 GRIFKFEAHLDRLFDSARAMDFKDCHTREEVRDAVIETLAANGMRDGVHIRLTLTRGEKTTSSMNPMFNVFGTTLIVLAEWKPVVSVATYDNKKGVSLITATQRRNPPMCVDSKIHHNNLINNILPKIQANLAGAADALMLDIHGFVAETNATNVFLVKRGAVHTPTGDACLPGITRGTVLR 365          
BLAST of mRNA_P-lacustris_contig1139.1095.1 vs. uniprot
Match: A0A7S2UVM1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UVM1_9STRA)

HSP 1 Score: 231 bits (589), Expect = 4.520e-65
Identity = 117/182 (64.29%), Postives = 140/182 (76.92%), Query Frame = 1
Query: 1039 QGRIFCLDRHLRRLQDSAHALAFKAIPSSDDITVAIMATLAANNMVDGAHARVTLTRGTKATSSMNPDFNVFGCTLIVLAERKKVGGAATYDNDLGMTLITATNRRNPPQCLDSAIHHNNLINNILPKIQANLAGAADAVMLDMEGFVSETNATNIFMVKRGKLMTPATGSCLPGITRSLIL 1584
            +G+I  L+RHLRRL  SA A+ F  + S ++I  AI   LAAN M DGAH R+TLTRG K+TSSMNP FNV+G TLI+L E K   GA TYDN  G++LITA NRRNPP  +DS IHHNNLINNILPK+QANLAGAADA+MLD++GFVSETNATN+F+V  G L+TP    CLPGITR  ++
Sbjct:    7 RGKILSLERHLRRLFKSARAMGFANVHSKEEIIDAIFQVLAANGMRDGAHMRLTLTRGEKSTSSMNPKFNVYGTTLIILPEWKPTEGATTYDNAKGVSLITAANRRNPPSTVDSKIHHNNLINNILPKLQANLAGAADAIMLDLDGFVSETNATNLFIVDDGVLLTPHADHCLPGITRQTVI 188          
BLAST of mRNA_P-lacustris_contig1139.1095.1 vs. uniprot
Match: A0A7S2YA45_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YA45_9STRA)

HSP 1 Score: 231 bits (589), Expect = 1.310e-64
Identity = 118/182 (64.84%), Postives = 140/182 (76.92%), Query Frame = 1
Query: 1039 QGRIFCLDRHLRRLQDSAHALAFKAIPSSDDITVAIMATLAANNMVDGAHARVTLTRGTKATSSMNPDFNVFGCTLIVLAERKKVGGAATYDNDLGMTLITATNRRNPPQCLDSAIHHNNLINNILPKIQANLAGAADAVMLDMEGFVSETNATNIFMVKRGKLMTPATGSCLPGITRSLIL 1584
            +G+I  L++HLRRL  SA AL F+ + + ++IT AI  TLAAN M D AH R+TLTRG K TSSMNP FNV+G TLI+L E K   GA TYDN  G++LIT++ RRN PQ LDS IHHNN+INNILPKIQANLAG  DAVMLD++GFVSETNATNIFMV  G L+TP    CLPGITR+ +L
Sbjct:   37 RGKILSLEKHLRRLSKSAKALGFENVHTKEEITEAIFRTLAANGMRDSAHMRLTLTRGEKCTSSMNPKFNVYGTTLIILPEWKPTEGATTYDNTAGISLITSSQRRNSPQVLDSKIHHNNMINNILPKIQANLAGCEDAVMLDLDGFVSETNATNIFMVDDGVLLTPHADHCLPGITRATVL 218          
BLAST of mRNA_P-lacustris_contig1139.1095.1 vs. uniprot
Match: A0A7S0STR7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0STR7_9STRA)

HSP 1 Score: 227 bits (578), Expect = 9.430e-64
Identity = 117/181 (64.64%), Postives = 136/181 (75.14%), Query Frame = 1
Query: 1045 RIFCLDRHLRRLQDSAHALAFKAIPSSDDITVAIMATLAANNMVDGAHARVTLTRGTKATSSMNPDFNVFGCTLIVLAERKKVGGAATYDNDLGMTLITATNRRNPPQCLDSAIHHNNLINNILPKIQANLAGAADAVMLDMEGFVSETNATNIFMVKRGKLMTPATGSCLPGITRSLILR 1587
            RIF LD H+ RL  SA A+ F  IPS   I  AI+ TL  NNM+D  H R+TLTRG K TSSMNP FN+FGC L+V+ E KKV    TY+N LG++LIT+  RRN PQC+DS IHHNNLINNILPKIQAN A AADA+MLD+EGFVSETNATNIFMVK G + TP   SCLPGITR  +++
Sbjct:    1 RIFMLDEHINRLIHSAIAMHFTDIPSRSFIINAIVTTLLTNNMLDNCHIRLTLTRGPKVTSSMNPKFNIFGCNLLVVPEWKKVEDITTYNNQLGISLITSCIRRNSPQCVDSKIHHNNLINNILPKIQANNANAADALMLDLEGFVSETNATNIFMVKDGVVYTPFADSCLPGITRQTVIK 181          
BLAST of mRNA_P-lacustris_contig1139.1095.1 vs. uniprot
Match: A0A7S1TU62_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TU62_9STRA)

HSP 1 Score: 238 bits (606), Expect = 2.960e-63
Identity = 122/182 (67.03%), Postives = 142/182 (78.02%), Query Frame = 1
Query: 1042 GRIFCLDRHLRRLQDSAHALAFKAIPSSDDITVAIMATLAANNMVDGAHARVTLTRGTKATSSMNPDFNVFGCTLIVLAERKKVGGAATYDNDLGMTLITATNRRNPPQCLDSAIHHNNLINNILPKIQANLAGAADAVMLDMEGFVSETNATNIFMVKRGKLMTPATGSCLPGITRSLILR 1587
            GRIF  + HL RL DSA A+ FK   + +++  A++ TLAAN M DG H R+TLTRG K TSSMNP FNVFG TLIVLAE K V   ATYDN  G++LITAT RRNPP C+DS IHHNNLINNILPKIQANLAGAADA+MLD+ GFV+ETNATN+F+VKRG + TP   +CLPGITR  +LR
Sbjct:  366 GRIFKFEAHLDRLFDSARAMDFKDCHTREEVRDAVIETLAANGMRDGVHIRLTLTRGEKTTSSMNPMFNVFGTTLIVLAEWKPVVSVATYDNKKGVSLITATQRRNPPMCVDSKIHHNNLINNILPKIQANLAGAADALMLDIHGFVAETNATNVFLVKRGAVHTPTGDACLPGITRGTVLR 547          
BLAST of mRNA_P-lacustris_contig1139.1095.1 vs. uniprot
Match: A0A4Y7LAH3_PAPSO (Uncharacterized protein n=3 Tax=Papaver somniferum TaxID=3469 RepID=A0A4Y7LAH3_PAPSO)

HSP 1 Score: 235 bits (600), Expect = 3.950e-63
Identity = 135/297 (45.45%), Postives = 176/297 (59.26%), Query Frame = 3
Query:  126 INVWATPRSLSTALMYSFAQRPDCIVYDEPLYAHFLRTHPEEETWRPYREKVFKEQDSDGDRWIREVALGSTPKPVVYMKHMAKQ-MRNLDLSFLPKCRNILQIRTPIHMLPSWDSNIHANLKEIGMLELLHLYSLVRAMGQEPVVIDAELLLANPEGVLREVSEMIGIPYAPEQLSWEAGPKPYDGCWAYVWYKGVRQSTCFDNSPRY-VKFDQNLAPLMEECMPIYQLLRSKAITGFGKLGKVQRPLAKEAVNAARDEKAESAAAGNDDILVWVGGGLVPRDMAKVSVFDSSVQG 1010
            I+ W+ PRSLST+LMYSF+QR D  V DEPLYAHFLR    E   RPYR++V  + DSDG+R + E+  G   K   + KH+ KQ +  L    + K ++ + IR P+++LPS+D  +  +  E+G+ EL+ +YS +  +G  P +IDAE L  +PE VLR + E +GIP+ P  L WEAGPKP DG WA  WYK V +STCF     Y      +L  L+EE +P Y +LR K       +G    PL    V A            ND ILVWVG  +VPRD AKVSVFDS VQG
Sbjct:   10 IHSWSAPRSLSTSLMYSFSQRDDIEVLDEPLYAHFLRVTGAE---RPYRDEVLLKMDSDGNRVVEEMIFGPGEKRYRFCKHIGKQRVPGLSSDLMKKGKHFILIRNPLNILPSFDKVVPPSFLELGLAELVSIYSELSDLGTVPPIIDAEDLQQDPEAVLRGLCEDLGIPFQPAVLKWEAGPKPVDGLWAPWWYKSVHKSTCFKAVKEYPTPLPPSLYDLLEESLPFYNMLRKKTRRTCSVIGP-SLPLPPLPVPA------------NDKILVWVGNEIVPRDSAKVSVFDSVVQG 290          
BLAST of mRNA_P-lacustris_contig1139.1095.1 vs. uniprot
Match: A0A7S1URX8_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1URX8_9STRA)

HSP 1 Score: 231 bits (590), Expect = 1.770e-61
Identity = 126/201 (62.69%), Postives = 149/201 (74.13%), Query Frame = 1
Query: 1039 QGRIFCLDRHLRRLQDSAHALAF---KAIPSSDDITVAIMATLAANNMVDGAHARVTLTRGTKATSSMNPDFNVFGCTLIVLAERKK-VGGAATYDNDLGMTLITATNRRNPPQCLDSAIHHNNLINNILPKIQANLAGAADAVMLDMEGFVSETNATNIFMVKR-GKLMTPATGSCLPGITRSLILRWQPSSAFPRRRRR 1626
            +G+I  L++HL RL +SA AL F       +  +IT AI  TLAAN M DGAH R+TL+RG K TSSMNP FN++G TLIVLAE K  VGGA TYDN  G+TLI+A+ RRNPPQC+DS IHHNN+INNILPKIQANLAGAADA+MLD++GFVSETNATNIFMV   GKL+TP    CLPGITR+ ++        P   RR
Sbjct:  324 RGKILSLEKHLTRLMNSAKALGFGMNSRCHTRPEITEAIFRTLAANGMRDGAHMRLTLSRGIKTTSSMNPKFNIYGTTLIVLAEWKPTVGGATTYDNTKGITLISASQRRNPPQCVDSKIHHNNMINNILPKIQANLAGAADAIMLDVDGFVSETNATNIFMVDHTGKLLTPHADHCLPGITRATVMELARELDIPAEERR 524          
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig1139.1095.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LIS9_ECTSI4.510e-20288.45Branched chain amino acid aminotransferase n=2 Tax... [more]
A0A8J5XF99_DIALT4.860e-6765.93Uncharacterized protein n=2 Tax=Diacronema lutheri... [more]
A0A7S2SSM2_9STRA3.150e-6565.75Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A6U4DSS2_9STRA4.120e-6567.03Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S2UVM1_9STRA4.520e-6564.29Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S2YA45_9STRA1.310e-6464.84Hypothetical protein n=1 Tax=Amphiprora paludosa T... [more]
A0A7S0STR7_9STRA9.430e-6464.64Hypothetical protein (Fragment) n=1 Tax=Chromulina... [more]
A0A7S1TU62_9STRA2.960e-6367.03Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]
A0A4Y7LAH3_PAPSO3.950e-6345.45Uncharacterized protein n=3 Tax=Papaver somniferum... [more]
A0A7S1URX8_9STRA1.770e-6162.69Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig1139contigP-lacustris_contig1139:17820..34066 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score585.1
Seed ortholog evalue2.3e-164
Seed eggNOG ortholog2880.D8LIS9
KEGG rclassRC00006,RC00036
KEGG koko:K00826
KEGG ReactionR01090,R01214,R02199,R10991
KEGG Pathwayko00270,ko00280,ko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00270,map00280,map00290,map00770,map01100,map01110,map01130,map01210,map01230
KEGG ModuleM00019,M00036,M00119,M00570
Hectar predicted targeting categoryother localisation
EggNOG free text desc.branched-chain-amino-acid transaminase activity
EggNOG OGsCOG0115@1,KOG0975@2759
Ec32 ortholog descriptionbranched chain amino acid aminotransferase
Ec32 orthologEc-20_001390.1
EC2.6.1.42
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01007
Exons16
Model size3529
Cds size1113
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig1139.1095.1prot_P-lacustris_contig1139.1095.1Pleurocladia lacustris SAG_25_93polypeptideP-lacustris_contig1139 17900..29094 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815444.6351972-UTR-P-lacustris_contig1139:17819..178991622815444.6351972-UTR-P-lacustris_contig1139:17819..17899Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig1139 17820..17899 +
1693493543.8580625-UTR-P-lacustris_contig1139:17819..178991693493543.8580625-UTR-P-lacustris_contig1139:17819..17899Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig1139 17820..17899 +
1622815444.8173358-UTR-P-lacustris_contig1139:29094..291571622815444.8173358-UTR-P-lacustris_contig1139:29094..29157Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig1139 29095..29157 +
1693493543.989717-UTR-P-lacustris_contig1139:29094..291571693493543.989717-UTR-P-lacustris_contig1139:29094..29157Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig1139 29095..29157 +
1622815444.8282707-UTR-P-lacustris_contig1139:29665..298251622815444.8282707-UTR-P-lacustris_contig1139:29665..29825Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig1139 29666..29825 +
1693493544.0003903-UTR-P-lacustris_contig1139:29665..298251693493544.0003903-UTR-P-lacustris_contig1139:29665..29825Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig1139 29666..29825 +
1622815444.8421822-UTR-P-lacustris_contig1139:30425..305801622815444.8421822-UTR-P-lacustris_contig1139:30425..30580Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig1139 30426..30580 +
1693493544.0132456-UTR-P-lacustris_contig1139:30425..305801693493544.0132456-UTR-P-lacustris_contig1139:30425..30580Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig1139 30426..30580 +
1622815444.853197-UTR-P-lacustris_contig1139:31069..321441622815444.853197-UTR-P-lacustris_contig1139:31069..32144Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig1139 31070..32144 +
1693493544.023219-UTR-P-lacustris_contig1139:31069..321441693493544.023219-UTR-P-lacustris_contig1139:31069..32144Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig1139 31070..32144 +
1622815444.8636365-UTR-P-lacustris_contig1139:33183..340661622815444.8636365-UTR-P-lacustris_contig1139:33183..34066Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig1139 33184..34066 +
1693493544.0313718-UTR-P-lacustris_contig1139:33183..340661693493544.0313718-UTR-P-lacustris_contig1139:33183..34066Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig1139 33184..34066 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815444.6524606-CDS-P-lacustris_contig1139:17899..179021622815444.6524606-CDS-P-lacustris_contig1139:17899..17902Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1139 17900..17902 +
1693493543.8709846-CDS-P-lacustris_contig1139:17899..179021693493543.8709846-CDS-P-lacustris_contig1139:17899..17902Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1139 17900..17902 +
1622815444.6755888-CDS-P-lacustris_contig1139:18515..186171622815444.6755888-CDS-P-lacustris_contig1139:18515..18617Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1139 18516..18617 +
1693493543.8787868-CDS-P-lacustris_contig1139:18515..186171693493543.8787868-CDS-P-lacustris_contig1139:18515..18617Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1139 18516..18617 +
1622815444.6945858-CDS-P-lacustris_contig1139:19064..191721622815444.6945858-CDS-P-lacustris_contig1139:19064..19172Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1139 19065..19172 +
1693493543.8883488-CDS-P-lacustris_contig1139:19064..191721693493543.8883488-CDS-P-lacustris_contig1139:19064..19172Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1139 19065..19172 +
1622815444.7084792-CDS-P-lacustris_contig1139:19952..200391622815444.7084792-CDS-P-lacustris_contig1139:19952..20039Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1139 19953..20039 +
1693493543.896008-CDS-P-lacustris_contig1139:19952..200391693493543.896008-CDS-P-lacustris_contig1139:19952..20039Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1139 19953..20039 +
1622815444.7220879-CDS-P-lacustris_contig1139:21027..211411622815444.7220879-CDS-P-lacustris_contig1139:21027..21141Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1139 21028..21141 +
1693493543.9038618-CDS-P-lacustris_contig1139:21027..211411693493543.9038618-CDS-P-lacustris_contig1139:21027..21141Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1139 21028..21141 +
1622815444.7326934-CDS-P-lacustris_contig1139:21705..217591622815444.7326934-CDS-P-lacustris_contig1139:21705..21759Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1139 21706..21759 +
1693493543.9117515-CDS-P-lacustris_contig1139:21705..217591693493543.9117515-CDS-P-lacustris_contig1139:21705..21759Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1139 21706..21759 +
1622815444.7430818-CDS-P-lacustris_contig1139:22650..228021622815444.7430818-CDS-P-lacustris_contig1139:22650..22802Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1139 22651..22802 +
1693493543.9298992-CDS-P-lacustris_contig1139:22650..228021693493543.9298992-CDS-P-lacustris_contig1139:22650..22802Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1139 22651..22802 +
1622815444.7537434-CDS-P-lacustris_contig1139:23076..231611622815444.7537434-CDS-P-lacustris_contig1139:23076..23161Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1139 23077..23161 +
1693493543.9444082-CDS-P-lacustris_contig1139:23076..231611693493543.9444082-CDS-P-lacustris_contig1139:23076..23161Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1139 23077..23161 +
1622815444.7655015-CDS-P-lacustris_contig1139:24225..242911622815444.7655015-CDS-P-lacustris_contig1139:24225..24291Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1139 24226..24291 +
1693493543.9530208-CDS-P-lacustris_contig1139:24225..242911693493543.9530208-CDS-P-lacustris_contig1139:24225..24291Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1139 24226..24291 +
1622815444.7781825-CDS-P-lacustris_contig1139:26662..267911622815444.7781825-CDS-P-lacustris_contig1139:26662..26791Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1139 26663..26791 +
1693493543.961643-CDS-P-lacustris_contig1139:26662..267911693493543.961643-CDS-P-lacustris_contig1139:26662..26791Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1139 26663..26791 +
1622815444.7890782-CDS-P-lacustris_contig1139:28257..283411622815444.7890782-CDS-P-lacustris_contig1139:28257..28341Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1139 28258..28341 +
1693493543.9710345-CDS-P-lacustris_contig1139:28257..283411693493543.9710345-CDS-P-lacustris_contig1139:28257..28341Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1139 28258..28341 +
1622815444.8030927-CDS-P-lacustris_contig1139:28965..290941622815444.8030927-CDS-P-lacustris_contig1139:28965..29094Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1139 28966..29094 +
1693493543.9803846-CDS-P-lacustris_contig1139:28965..290941693493543.9803846-CDS-P-lacustris_contig1139:28965..29094Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1139 28966..29094 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-lacustris_contig1139.1095.1

>prot_P-lacustris_contig1139.1095.1 ID=prot_P-lacustris_contig1139.1095.1|Name=mRNA_P-lacustris_contig1139.1095.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=371bp
MVPKGGKLLDDGTVRINVWATPRSLSTALMYSFAQRPDCIVYDEPLYAHF
LRTHPEEETWRPYREKVFKEQDSDGDRWIREVALGSTPKPVVYMKHMAKQ
MRNLDLSFLPKCRNILQIRTPIHMLPSWDSNIHANLKEIGMLELLHLYSL
VRAMGQEPVVIDAELLLANPEGVLREVSEMIGIPYAPEQLSWEAGPKPYD
GCWAYVWYKGVRQSTCFDNSPRYVKFDQNLAPLMEECMPIYQLLRSKAIT
GFGKLGKVQRPLAKEAVNAARDEKAESAAAGNDDILVWVGGGLVPRDMAK
VSVFDSSVQGAMCGKVFGCTGKNILPRQAPTATTRLRPRPRLQGDPFVGR
HHGGDHGYASRQQYGGRSPR*
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mRNA from alignment at P-lacustris_contig1139:17820..34066+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-lacustris_contig1139.1095.1 ID=mRNA_P-lacustris_contig1139.1095.1|Name=mRNA_P-lacustris_contig1139.1095.1|organism=Pleurocladia lacustris SAG_25_93|type=mRNA|length=16247bp|location=Sequence derived from alignment at P-lacustris_contig1139:17820..34066+ (Pleurocladia lacustris SAG_25_93)
CAGGAAGCTCACGCGGGAGTCCGAAGCAAGGCAACAAGGAGGCGGAGGTG TACGTGCGGCCGCCAACTACGACGAAGCTCATGGTGCGTTCCGCCTTTCT CTCTCTCTGTTTCTCTCTCTTTTTCTCTCCTTCGTTGTTCCGAGTGCGGT AGTCTCCAACACGAATGACCAACCTGCGCACGTGTATGGGCGGGGTGACG GACGAATACTTTCCAACACCAAAAAACCATAGCAATGCCAAATGGCCCGT CTAATAGTAGATTGTACCGTACTCAGTTCTCGGGGTCACGAGCATCCGCA CTCCTGTTCGGCCCTCTTGAGACTGTCGGAGTTTTATTTGAGTCTGTTCA CCGTTTTCCTAGCAAGCTAGCCAGGTTGTGTCTGTTCTCTATCCCATAGC CCCCTCTTGGCTGGTTAGAAGTGTCCCGGGGTAGCCCCGAAGCGGGTTGT TAGGGTACGCTGCCGCGGTATTGTGTTTCCCGGATATCGAATACGAGGAG GAAGCGTGAGATTGTTGTCGCGTTTCGGGGAGGAGAAGCAATGGGTACGA GGAGTGTTTTTCCCTGAAACTCAAGCTTGAGGGGGGTGGGGTGCTAGCCT AGATGCAATGCTAGCGAGAGTGTGGTGTAGCAACTAAAATGTTTTGCGAG ATGGTCAACGTCTTTCGATGGAAATCGGTTTGTATGGATGTGTTAGGTGC CAAAGGGGGGCAAGCTGCTGGATGACGGTACGGTTCGGATCAACGTCTGG GCAACCCCACGCTCGCTGAGCACCGCTCTGATGTACTCCTTTGCACAGGT ATTACCACAACAACCCGTCGTGTTGTTACAATCGTTTTTTGTGTGTTGTT GCTCTTTGTTCGCCTGCTCCAAACGCTCTTCCCGACGTTTCCGTGGACGT TGCAACAAAGTTTCGTGTGGCGGCTTCCGTGTGGGAGGGTACTCGCCGTA TACGTTCCGATACACCTCTATTTGCTGCCACGAGTAGTTTAGGCTCAAGT TTCGGTAGCGCTTCCACATCGAAGGACAAAAAAAACGAAACGGCGGAGCA AGAACTACTCTTCTATTCCCGGAATTGCGCAATTGCCCCTCTGGCCTGGA TAACCCGTTTGGTTGTCGGCACACTTCGAGGAAGCCCTTGTATTCCCCGC GATTTGTTTGCAACAGCCGTTTCCTTTGGCGACATGTGCCAGCGCTATTT CACGTCGTTTTCATTTTCCCTCCAACGACTGCCCGCCGACCGCAGAGGCC AGACTGCATCGTCTACGACGAGCCATTGTACGCACACTTCCTTCGGACGC ATCCGGAGGAAGAGACGTGGCGGCCTTACCGAGAAAAGGTCTTCAAGGAA CAGGTTCGTAGGTGATCGATGACAGATTTTCGAGGCTGCTATTGGGATGT TCGAAAGAATCGCAAGGGGTCGAATTGCTCGTTGTGAGCTAGTAGTGTAG TGTAGTTGTTCCGAGCAAGATTGGTCTATGTCCCTGAGGAATCGTAATCG TATTCGTGGTACTGGTAGCGTACACTAGCAGCACGAGTTGATAGAGCAGC CAGCATCTTTGGTGGGTAGGAGTAGCAGACACGTGCAGGTGTTTGCAAGA GATAGGGACCAATAGATGACTTGCATACTTTGAGGCTGTGAATATCTTTA ATCAAACCCGTGGAAGGATCGGACCAATCACCGCTCGATATGTAATCCTA CAAACCAGCCCACCAATCTCGCCAACGCACATACTACTGTCTTCAAGATG CCTTAATCGAAGTCAGCTAACGAGGATATCGAACGATTTCCGACCTCGAC CCGCTTGATTTATTTCCGCATTTGTCAGGGTTGGTTAATTATGTATTGAT GACAGGGGCCGTTCTACGTGAGTTGGCTCACAAAAAGCGGCACAAACCAA CCAACCGGTCTATTCGATAGCCCACTATGAATGGTCTGGACATAAGTACT GGTCACGAGCTTTACCCTATACATAGCGAGTAGATATTGCATCTCGGGAA CTGGTCACGAGCTTTACCCTATACATGGCGAGTAGATATTGCATCTCGGG AATTGTTTTGCGAAAGGATGTCATCGCATTTATCATAAGCTCAATTATGA TGTACCATATCTACCGTCGCAACTTGCGTGAAGGATTCCGACGGAGACCG GTGGATCAGGGAGGTAGCGCTGGGCTCAACGCCCAAGCCTGTGGTCTACA TGAAACACATGGCCAAGCAGGTATGAGTCCTCGCTTGGTTCGATCGTGCT TGGATGCCCATTGTCTGGCTCTCTTTTCCGGCATCCAACAGCTGTCGTGC GCGTACCGACCAGTATGTCCTTTAGGCGAAGGAGGCATAGGAATACGGGC ATTCCCGCTGTTTCTTGGGTAGCAAACGGGTCGTAGTGTCTTCCAAAGAA TTGCGAATGGTCCTGCTATGGTTCCCTCGATCTACCACACTTGCGCACGC ACGCGGTTGGTTGCCCGGCTTGTCTCAAGCGAGGAGCACCGATAATCTAG ATAGACGGTTTGCCATGAACATGAAATAAACCAAATGCCACTCTGAGCGG GAACAAACGGCCGACATGGGGAGGATCCGTCTAACTTGTGCAGTTTTCAG CCTTTTTAAAAACGTGTTCTTAATTCGGATTTCTTTCGCCACGGCACTGC CGCAATAGATTCGTTTTTTTATGTAGTTCCGTCAGTCAGACGACCCACGG CACCCAGGGGATGCATCAGGGTTTTGGTATTGGCATCGCTTGCGTGACCT TGCGTTTGGGGATGATTTTTGGAGCTACAGAGATTAAAGCTTTCCGCTGA TAGCTTACAATGCATGAGTTCTAGCTGGTGGTCTGGACCATCCCTCGATC GTTGGACATGTCTCAGCCGAATCGTGAAGGCCGACGACCGAACGATCGCG CACGCAAGGTCGACACCCTGCTGCTTCGCCTTCTTGTAGGGGGTTATGTG ATGGACGAAAGACTACGATCACCTGCATTGGTGTCGGCATTCCCGTCTGG GTGCCAGGAATCCGATGAAGAAAACCGTCCCCCCCAAAGCAAATCGCGAA AAGGGGTATCGTACCCCAAAACATGGCAGCGTTGGCGTCTTGTCCGTACC ACCCACTTATTCCGAGTCAGATAATTTCTTCTTTGTAACGTTCTTTGTTT TCCTCTTGGCACCACCAAACCGATATCGCTCGACCCGCACACCGAAATAC CAATGCAGATGAGGAACCTGGATCTATCTTTCCTGCCCAAGTGCCGAAAC ATTCTCCAGATCAGGACCCCGATACACATGCTGCCTTCCTGGGACTCCAA CATTCACGCGAACCTCAAGGAGGTAAGCCCATCTTGCCCCCCTGTCCATC CCTCCCGTTCTATGAGCGAGATCCACGACCCACGTTTGTTCTGGAGGGTT TCCATTGAAGACTTACAGCGGCCAAATAAACATGCGCGAAGGTAAGGTAC CTTCTAAGGAAATGTCCATCGCGTTGGGCCGAGGATCTTGTGTGCACCAT GATTCACTTCATCGGGTTCCAGCCTTGGTTCCACTATCAAGTTTGAAATT TCGTTTTTCGTCTCGAAATGAGCGCGCGTTGTGTTGCAACTACGTGCAAA GATCCTGATGACCTGGTGAGTACGCCACTTCCCTCCCCCCCTCGTGCTAG GGCCGGGCACCACTTTAGTCCGGTGCTCAGCACCTGACTTGTTTCGTAGC GCTACTTAGTCTTCTGCGTGTTTTTGGCGTTTTTGTTTTGTTTTGTCGGA AAGAGAATCACTACCGTACCTCGGCTATAGGCGTATCGTGCGTCCTTTTT TCTCTCGCTCAATTATGCGTCTTTGTTCTTGTCACCACCTTGGCTTAGCT CTTCCCCTGTGCTTTCGTGCGTCGTTCCTTGTTCAGATCGGTATGTTGGA ACTCTTGCACCTGTACTCCCTAGTACGCGCGATGGGCCAGGTGAGACCAA CGTCAGTGTTCATGTTGCCTCTGTCCTGCCTCGCTTCCTTGGGTGCTAGC TTTATTTTCCCCCTGCTGTTCGTGCCAATTACTGCCGTGATTTGCGCTCG CATTGACCCTTCAGCTTGGGGCGACTCTCTCTCTCGGTTGCAGCCTCCAA CTTCCTGAAATGCTGTGGTTACCATCTCGACACCAGCGCAACTGGGATAG GCAGTGGCCCTCATCATCATCTGGAGGATCTTCACCATTTTCGCCCTCCT CAAAAACAAGCACTCCGTTTTGGCATGTCTGCTTCAACCCTGCCCGTAGA GATTTCTCTTGGGGGCCTAGGAAGCAACAGCCAAAATAACAACAGGAGAC GGATGCGAGAGTTTGCGACCTGCAACACGCGCGCGTTCGACATAGCAGTA TGTGTTAAACACCTCTAGGCTCTAGGAGTCGCGTTTCTGACCAAAAGAGG GTTCGAGCTCGCTCCCAGACACTCGTCGTCGCGCCTAGGCCCGGAAATTG TGCGCCTCCGTGGCACTCGTATCCCACCGATCGAAAGTACGTAATTCACT CTGAAGAACGCAAAAATGAAAGGCTGTCATTGCCTTGGGCCAGGGGAGCT TGTTCAAGCGGGACACTCGCCGTGCTCTGCGATGTCGCGCCGAGCATCGA CCCTCCACAAGGCGTGTGAAAACCCTCGCTCATCCCCCGATGTGTCCGTA AACTAAGCTCTATGGAAGAGTCTTGTGTTGCCCGGAGAGCTGCTTTTTGA GCGAGCATCGAAGAGCAACTGCCTCACCTCACCCCCGCACCATTTTGAGG ACGCGCGCTACTGGCGCCGCCGAAGCTGCGGAAACATCGATCTGTTTTTT CCCACCTCCGTTAAACTCCCTTCCGATGTAGGAACCAGTAGTGATCGACG CTGAGCTGCTCCTCGCCAATCCGGAGGGTGTCCTGCGGGAGGTGTCAGAG ATGATCGGCATCCCGTACGCCCCGGAACAGCTGAGCTGGGAGGCTGGACC CAAGCCCTATGACGGCTGCTGGGCGTACGTCTGGTGAGGCGGAAGTTCGG TGTGAAGGGCGACCTCGACAGGGGTGCGCTACCAGTACCCTAAACCCTAG GTCGACCAGGGGTGCTGAGGTCGTGGTGAAAATAGCAGTTGGTGAAGGCC GCGACAGGTAGGACGTGTGCCTCGGCGCTGCTGGTGTAAAGTTGTTAACA CGTCTTTGGGCCGAACGCTACAAAGGCTGGCTGTTGTTGCTGACCAAGTG CTGTATGTCTCGTGCGTGTGGTACGTTTTTTGTCTACGTACTTCGGTCGA AAACAAGGTACAAGGGTGTCAGGCAGTCGACCTGCTTTGACAACTCCCCT CGCTACGTCAAGTTCGACCAGAACCTGGCGCCGCTCATGGAGGTTGGTGC ATTCAATCCGAAAAAAATGTTTTCAGTGCGTGACGAGCATGCAATCCTAT CGCGTATGTCCGTTTTTCGTTCAGGCTTGTTTTCTATTTCACAGCACGAT CTGTTCCCGAAAGCACGCGCCAAGTTACTGTAGCATTCGCTGTGCTTCAT GTTTTGCATCGAGGTTAGCAACATCCTACTTGAATTCTACATCCAAATGA AAAAGACACTTTGCCGCGAGGTCCATGTGTGATTTTGTAACGCGCTTCCT ATACCTTAGGACATAGTTACGAAAAATGTGCGAACCCCTATTTTGTTGTT CTGTTGTTGTTGTCTTCACATTGAATACCGTTCTGGTCTATCTTATACAC TACTCCTCTTCTGTACGCTTTGAAGGTAAAGAAACGAACGATTTCACGTT GTCGCACGCTAACTCAAAATTCTTCAGTGTGATATAGTGATGTTGTGATA TGCGTACGGCGAAACTAAAATAGGCCCAGCGTGAGAGAGATAGAGAGAGA GAGTCTCACCGCCGGCGAAAAACAGAACAAAAAATCATCACTTGACTGAG GCGAGCAGTATAGAGCACACAACTTGTTTCTTTTTTGTCATGCTTCGCGT CGACACCACGACCCCAGCTAGCATACTGAAATGCTCTCACAGAAATTCCT TTATTGTTTTGCAGTTTTTGCTGTATATTTACACTCGTAAGGATTTGACG AAATGTCGTTTGCGTGGCGTGGTTGTGGCAGGTTTATCTCGGTATATCCC CTGCGATAAAATAATGGCCACAGGCCGTGTTTTGTACCCCAGTGGCGCGG GGTTCGTGACTATTTCTCCGAGACTTTGTTCTGTGTATTCCTCCAACTTG TTCGCTCATTTTTTATGCTTGAGCCTTGTATCGACAGAGCGCCGATCTAC AGCAGTAGAAAAGCACCACCAGGAAAACTCGCCTCACGGACTTTGACTCC TCCCCACGATTCTGGAGTAGGCCCGTCCCTTGAATTCCGCACCTTCTCAA TTCTAGCGGTTTTGTTGTTTTCTTGCGATATTTCCCTCCATTTTCTACTC AACCAGGAGTGTATGCCGATCTACCAGCTCCTGCGATCCAAGGCCATCAC GGGTTTTGGCAAGCTTGGCAAGGTAAAGGTTAGGCGGTCGGTCCTCCATT GCTGTTGTCCTTTTGACGTGAGTTTCCCCTCCCATCCTCCACAAATTCGC CCTGCGCCGTGAAGTGATGTCTTCTCTGAGTGGCTTTCCTCCCATTCGAT ACCACGTCGTGCTGTACTGTTTGTTGTCTTCACTGATTAACTTTCCCCTC CCCTTCGGTGCCACTCGAAATTAAACCTCTTACTGGCAGTCAGTGGGTCT TGACACCGAAATTATGTGTGAAAAATATTGGAATATTTATAGTGTCGCTG ATAGACCGACGCCGGATTTTCGATTTTTACTTGTGCGGTTTCGAGATTCA TCAGTTTCAGAAAAACGAAGCGAGCTTCGAATAGTTGAAAAATGTGGCTC AAAAATGGAGGGGAGGCTCATGTTGTTGCCAGCTGCTTGCCAGGCTCTCT GTATCTCGGGACACACATACATTCTCTAACACCTACAACGACTGTGTAAC ACGTGCGATGCGTTTGCATGAAGCAGACATCCAGCAGAGCACAGCAAACT CATGTTCAGCGCGAGCTGCTCTGGATTGGGAGAGGGGGAGTAACCGACGT GAAATTTTTCCCTCGTCAACGGCGTTATTTCGACTGTTTCTGTGTCAAAC CGGAGCATTCGATCATACAATGCTCGCGGAGTTCGCCGCGTGTCGATGCG AGCCCAAAGTCTACTATCGCGGCTGTATACAGACCCACGTCGGGAGCTAT CAGTCTGTATCGTGAATGCCCTATGGCCGTCACGGTCACGATTTGAATCG CTGCAGCGGGCATCTGCGGGTATTTTTGGTGTTTTGCGAGTCGTTTTTTT TTTTCGTCTCCAAATGCGCGAAAATTAAATTGTTTCTCTTGAAGTTTGTA TCGCCGGAAAAAAATTGGCTCTGGTTCCCTGATGCCATTGCTAGCATGGC ATGATGATCGGTCAGTTGCGGACCTTCTTTTCTTCGTGCAACAGTTTTTT GCAGGTTTGTGCACACGTATGCGCACAGCTATTTGTACACACATACACGC CGCACAGGGTAACGCACGCAACGCGTGACGCTGCACGACCAGCTTCCTCC GCACAGGCTCAAGGTATCCCATTGTTGTTGACGCAGAAGCCCGGCCGCAC TGCCTAGTTTGTCAGAGTTGGACAGGACTCGACCCCCTACTCTTCCTTTC AGCAACGAGTTTGTAACACACTACAGAGATCGACGGGTAGCCAAGGGGCT AGAGATTTGGCTCTTGACGACCCGGCTGGAGTTCAAACCTCCGTGTTGAC GTTCACATCTGCCTTTTTTCCGTATGACCGAAAAGAGTGCTGGGTGCTCG CGCGCACGTACTACACGTAGCGCCGAAGTTGTTGATCGCGCGTATGATAT ATTGTCTCCCAAAACCCGAAGAAATAGAAATAAACCAAACAACCAAGCAA CCAAACAACAAGACAAACAAAACAAATAACCAAAACAAATTATATTCTCA TTGTCTCCCAAAAAATAAAAATAAATATACCCCAAAAACGTTTTTCGGCG CCAGTCGGACGCAGAAAGCATTTGAAATTTTGATATTATTTTGTAGCCAT TATGTCGAACTCAACACCAACAATCAAAGCCCAATTCGGATTTCGATTTT TGCTGGAGTGTTTACGATGTTAGTGCCCACCTTGCCTTCGGTCGACCGCG GTGGCGAGTCTTGCAAGTTTTATTGTTGGAATTGTGCCGGGCAAGGTGCT CCCCGACAAACCCAGTCTTTGCGATGCTGTTCTTGGGATACCAAAGTCCG CGTGCCTCGAGCTTGTGCACGACCCCGTTTTCTCGTATTTTAGAACCCCC GTTGTTCCGTGTTCCGTGTTCCAGGTCCCGTGTCCAGTGTTCCGTGCACC GTGTTCCATGACGTTGAGTTGTTGCTGGTGAAGCACGCTTCCTCACGTGG GACCACTGCTTCTGCTGTGAGCAGGCTCGTTCTTTGTGGTGTTCTGAGAA GACACGCGAAAGAGGCTAAAGAGTTATACCCGAGATGCGGCCAAGCCTGT TTTTTTTCATTGTTGCAACACGTGCCCGTCGAATTGTTCGAGTGCCACGA GTTCACGTCTGATCAAAACTATCCAATCCAGTTTTATAAGAAAAAAGCGA AGCTTTCATTACCCTGTGCATTGGGAGCGCTCTTCCACGAGCTGATTTAT TGGTCTCCTTCGCTTGCCACAAGCAGCGCCTTTAGCCGATGATGTCACGG CTCCTGCTTGGGCAGGGCATGCTTCGTCCCAGAAACACAAGCTTGTTTTT TCGCGCTTGGGGTCAAATCCGCTTTTGGGCCGGCTCCATTCTTGAGTTTG CCCGGACGATGAACCAAACCCATTCCAATCAAACCAAAATCAGGTGCAGC GTCCGTTGGCGAAAGAGGCCGTCAACGCGGCAAGGGACGAGAAAGCGGAG AGTGCAGCTGCCGGGAACGACGACATCCTGGTGTGGGTTGGTGGGGGGCT AGTGCCTCGCGACATGGCCAAGGTAGCTTGCCTTCTTCGCCCGTGCCTGT GTGTGTTTGGTTGTGCGTGCTGTCCTTGAGCTTTTGCTAGAAAGGCTTGA ACCCGTCGCTGTCGTTGGTGGTGTGGGTGGTGTTGTTCGTGGCGGTGGTG GGGCTACTCTCTTCCCATCTGAAACCGTTTTTGGGTCGACCCAGTACTGG TAACCAAGCACCAGCACTGGTGCAACCATTAAGTGCCAGACTACTTCAGT CGGACAGATTTCGGAATGCGCCATTGGCAGGCTGATATTCCCTGCGAAAT ACTGAAACTTCCGTCATGCCATGGGGGGTATTTGAAATTGTCATGTTCGT AGGAAGATTAATGACATCCGTTGGCCAAGGCATCCTGTGGTGGGTACGTA GAAGGCTTTGGCCCAAAGACTTGACCAGGCGGTGGTATTGCGGTGGTATT AGGATTCGACTTATGCTGACAACGGTGGCGTCGCGCTCAATATCGATGTG CCCGACTGTGGAAGCATGGCTGTCGCCTAAGGCACGCACGATGTACCCGA GTTGTGAGATGGGCGTACTTCGCTTGTGTCGCTCGCATCGTTTTTGCGAT ACATCGAGTGCGTGTGCCAGCGAGGACAAGTTACGGCAAGACAAATGAAG TGAAGGGGCGTAAGGTCTCGCGGCATGGCCAAGGCCAACTATGGATACAA ATTGTGGCAAACAGGTGCATGGGTGGCTGGGCATGTACCCATGTTTCGCA GCGGTGTAAGTCAAACCTTGGCGTCTTGGATAGCCGGCCAATGGTCACGA AACGCCAACTTGCTTATTTTCTGTGCGGCAAGACTTGTTCACCGTTGATG GATGGATGCGTACGGTTATGACTTCACCGCTGTCCGTTGGCTCGCTGAAA GTATCTGTTTCAAGGTTTTTCTGCCCTGCACATTTTTTGTGCGTCCTGCT ATAAGGCTTCGTCGAAGGGCTTTCGATTAGCTATATCCCGCTCGGTGTAC CCGACACATATCTACGCAAATACCCTCTAGAATCGTGTTGGCCGAAGTAA GCACTTGGTGAAAGTTCGCTTACCCCACTATTAACCATACTGGCAGCAGT TTTACGTAGTTTTGTGAGCGCGGGTTTGTTCTTGTGGCTTGCTACCACTC GCTTGCGCAGTTGTTGGGGACCAGGTGGGGCCTGCTTCGTTCTAGTCTAG CGTTGGGAGGGTAAGGTTTCCAGTCATGATTCTGTCGCCGTGTATTGGAC ATTCCAAGCAACGTGTCGCGTACATTGACCGCCTTCGTGTGTCGAAGCGG CGTGTGTTCGTCTTGTGAGATGTGTGGCCACCGGTCCGAGCGATTGGTCA AGGCACGAACCAAAGACATATCTTCACCTTTTGCCGCGGCCACAAGCAAA CGCTGCCTTCGTCCCTGCTGCCGGTAACGGCTTGTGCGTCTCTCCTTGTC GTTTCGCTATCTCCATGTCCGTGCACGATCCTACGCAGGTGTCTGTGTTC GACTCATCGGTGCAGGGCGCGATGTGTGGGAAGGTATTCGGGTGTACAGG GAAGAATATTCTGCCTCGACAGGTGCGAAAAGTTGCTTGGGTGCGCCACG GGTTGCAATGTCCGAAAATGGGTGTATCAAAGAACGGCAGGAGCGAGATA TTCGTTCACGTTTGGTGATGTTTTCGTTGGTGCCTCCGCCTTTTATAGAC GGGAACCTTGGTGCAGCGATACAAATCCGTTTCTCTGATACAACTCCATT CTCTCTCAACTGGTGTGTCGGTGTTATGTTCTGTGACCCACTTCGAACGT TTACAAGAAGCGTCTTCAGCAAAGTATAGTGTGCCGGACGTTGATCTCGA TCGCGACGCCGTGTGTGCTGTTCTTGTTCACACGCTGTGGTGGTTGTGAT TCAACTGCGCATCACCGGGTCGCTTGCGATACTTCTAGCTAGAGGACGAC GAATAGGGCCGTTTCGTGTCGATCTTCTTTGTATTGTGTCTCTGAATGCC ATATATTGGTTGGGGGTAGCGTGGCATGGCTTGTGATCGCAAGAAGCACT TGTAGTATTATTACGTCGTCAAATCAGCAGCAGCAACAATAGCACCAGCA GCATATTGCAGACGTCTGATCTCGTGCGTGGCTACAACCACTAAGTCAAG GCCAGCTTCTCCTGCCTTCGCACGCGTGACCTGTTTCATGTCCCAGGCAC CTACGGCGACTACAAGACTCCGCCCACGCCCTCGCCTTCAAGGCGATCCC TTCGTCGGACGACATCACGGTGGCGATCATGGCTACGCTAGCCGCCAACA ATATGGTGGACGGAGCCCACGCTAGGGTGACCCTGACGAGGGGGACCAAG GCCACTTCCAGCATGAACCCCGACTTCAACGTTTTCGGGTGAGACGATTA ATTTTTCGTTTTTTTTCTCGGGATTTCACTCTATGCGCGACTGCCTCGGG ATCAAGGACGCGGGTGCAACCAAGAAACCTCGTTATTGGTGCGACCGGAA GAAGGGGTGGTTCAATCAGGGTTGAACATCAGGAATTAGGTGTTTCCTGT GGTCTCTCGCGCTTCGCAAGGACAAACTGTTGGACTGGAAACGCTGGATT GGAAAGAGAGCAGAGGTTTTGCTGTGACAGACTCTCTCCCCTTTTCCGTC TACATTCTACCGGCGTTAGCCAAAAATCGCAACATCTCCATTTGGCGAGC TCGACCTTTGTCCTTGAGATAAGTAGCGGCATGGCATCGCCGTATCGCTG TCGATATCTGGCGCTACAACGTAGTTCCCAATAGGATCACGGTGTTCCAT GTTGTGCTTGTTGCATTTGGTTAGGGCAGAATCGACGAAAATCATATGCC CGCGTCGAGTGCTTTACGCGTTCGTGCCCCTCTCTGCCATGCTTAGGTGC ACGCTGATCGTTCTTGCCGAGAGGAAGAAGGTCGGCGGAGCTGCGACCTA CGATAACGATCTCGGCATGACGCTCATCACCGCCACCAACAGAAGAAACC CGCCGCAATGCCTCGACTCGGCGATCCATCACAACAATCTCATCAACAAC ATATTGGTGAGTGGACGGCTTGCTCTCTCGCTCTTCTCGCGTGCCCCAGG GGGTGGATGGTTTGTGTTTTGCTTTTCTCTCGTTCTTTTTCCAATCCTCT TGCTTCGTTCGGTTGGATTCGGCGGAGAGGGCTTTGTTTTTGTGTTTTTC GCTGCCGCGGGGCTTCGCCGTTCATCGCAGAACCTGCTTGACGGTTTCCA CCTTACGGAGTGTTTTTATCTAATGGTTCTGGTTCACGTGTTCGGTATCG TGGATGCTATTACCGTTCCCAACTTTCCCTCGTTCCGTTTGTGGGTTTCT TGGTTGCTGTAGTTGCTGTAGTTGTTGCTCGTTCTGCGTGCCTTCCTCCC GTCATTTTCCGGCCACACATCATTGTGGAGCTCCCGAATGCTGTCTATCC CGGAGGGGAAGCTTCTCGTCCCGGCCACCCCGCAACATTTTCGTTTCGAA TCATTTTTCACAGGCCATATTTTTTCTTGACGAGAAGCGGTCACGCGTTT ACTCCTTAGGAAACCATCAGTAACCTGGTTATGTGTGTTTCGACGGTTGT TTCTTCTGTTTCGACGTTTCGTGTTTCGTTTAAAATTTCTTGTTCGTTTC ACCAAGCCCAAGATTCAGGCGAACCTCGCCGGGGCCGCGGACGCTGTAAT GTTGGACATGGAGGGCTTCGTCTCCGAGACTAACGCCACCAACATCTTCA TGGTTAAGAGAGGAAAGCTTATGACGCCGGCCACCGGCAGCTGCCTGCCG GGCATCACGAGGTGTGGTTCGGATCGATTTTTTGCTCGTTGAGTCATCCT ATTTATTCCCGTGCCTTGCGGTTTTCCGCTCCATGAGTTCAGCGTGTGAC TAAATGTGCAAATGCCGAGCGTGGCGAAGGTGCAGGTTTTTTTGTCACCA AGCGCGACGGTGGCTCACGGGACGTTGGGCGCTCACGGCAACGTTTCTTT ACCAATATCTGGTGTTCTTTGCGATTGCGGTTGCCATGTGTGTTTCTGAA CTACCGAAGAGGATGTTGCCGATGTTGATGGCATTGTGACCGAGCTGGGA GCCTACGACGGAGAAGGAGAGACATGCACGTCTTCCCAGCGTTCTGAGCT AGCTGTGCATCGATTTTGTTGCGCCTCTAAAAGTTATGGTTCCGAAAGAA GCAGAGACAACGGGAGTCTGAATTGTACTACATGGTGTGACACGGAGCGG TATGTTTGCTTTTGCGCCGCATCTGCCTGGCCCCTTTGCAACATCCCAAG GAGTCTCATCCTGAGATGGCAACCGAGCTCGGCATTCCCGCGCAGGAGAA GAAGGTATCCCTGTCCGAGCTGCACTGTGCGGATGAAGTCTTCACCACGG GAACTATGGGAGAGGTACAGTATGTGGCAAGACCGGCCCTTCTTCCTTGA CTTGTTCCGGGGTCTGTACTAATGAAGCACCCCAACACTGGCTTTGGCGG AAAAATCGCCTATGATGATTCTGCTGCACCATTTCTGGGGAGAGTTTTTT TATGTGTTCTGGGAACCATGCCTTTTGATTGCTTTCCAAAGGCTCTAGTT TTCGGTAGGCTTGTCATTGGTGGCTTCTCTTCCAAACAGTTATGCTTTGT CTAGCGCGATAGTGGATGCATCACACACACCGCACCACCGAACACACACA AGTATCTCCACACCAAATGCGCCACCGACGCGTGGGCTCTCCGCGCGACA CTCCCGACCCAAGTCCCGCAACGTGCTTGACAGTGCCGGGTGCTCCTGTT TCCGAATGGCGATAGAGACAGCATGGCTTCTTTCTTCGTCCAGACCGACA CTAATTGGGTCTATATATTCGACGTGTGTACCCATTTTCGACCCCCCAGC GCACACTTGTCGATGGAGACGCGGTGCTGGGGCTTCTGTCCACAAGCCAA TAGCTAAATAGGAGTAAATAATACCTCAAGTACACGCGTACGTCTTGGCA CATAATAGCTTGTACGTGCCAGGAGGTTGCGCGCGTTGGTTTGTGCCTAG CTTACCTTGGCGTTTTCGAGGCACATCCCACAAACAAAGCATGAGCGCGT TTAGACCTTTACCCCAAGACACACAACATCAGCAGGCGGCCTGAAGGTGG CCCTAACACATGCTCATTTGGCCCTTTGGTGCAGTGCTTCTTGAGCCATG TTGGCAAATGATAGTCTACAACCATACTTCAGCTGCTATGAAAGGTGCAC TCGGGACGGGCATGAGATAATTCAAATGGCGGACGCTCTGGAGGAAAGCT TCGAACTGGAAGGATACATGCAGCACAAGAGCACGTTTCGTTGATGGCCT GGTTTCATTCCTCATTCTTCATCCGGTACATACATGTCCAGTCCGTTTAG AGGCATTTACTCTATGGATACCGTATACTATCTAAATACGGCCTTGCCTC TCCTGCTCTCGCAAATTTATTTTCTCAGCTCGATTTGTATCTGGCTGGGG TTGGCGATCTTTCGGTCTTTTTTTATTTTGTGTTTTTTTTTGGGCGTCGC GTGTCGAGTAGGAACGATAGGCTCTACAATTCTAGTTCCCTCCTTTTGTT CGACATGTTGAAACACAGTAGCCTGCCACGTGAACAAGTCTTGTTTCTGC GTGATTCATCATGCTTTTTTTTGTCGCGTACGGATGTGTCGGTCACGGGT GGTTCTGGTAGCCTTGAAACCCTCTGAACAGTTCGGCAGGAGTTCGAATC TCGGTGAAGTCACACGATCTGACATTCGGTTCCAGCAATGCCCACCAGTG TAGAGCGACTAAGGTCGTGAGTGCACCAAACTTCGACTAAACGGTCGACG AGGGAAAGCGTCGGCTGAGTCCTTCTCGAGATGAAAGTTAAGGCACGCAC GGCAGAAGGAAGGAGGACAAAATCCAGAAAAAATGGGATGAAGAAGAAAA CGAGGAATCTTTTGATTTTCTGTTTCCTCTTTTTTTTTCTCTTCGATTTT TCGTACACCGTTTTGGATGGCAAACCTGAGACCGCTGAAGGTGTCCGCGT CCGTTGGACCAGTGCGGATGTCAGAAGGTAGTAGGCAGAGATCGGAACGA TATTTTCATGTGAAGCCCACTTCAAGTCAAGGTGGTCGATTTCACCTGAC CACATGTCTGTACAATGCATGGCATGAATCGACTTGCAGACGACATGATG ATTGTATGTCTCTCCAAGCACGGTGCAAGCAGCCTCATCGGAATCCGACC AACATTTTTTTCTCCTTGACGGGAAGATTCATTCCCCCCGGCTGTGTGCA GTCCGAATTGGTGCGAACATAATATCCGGAATCTCGCCACCTCTCTCGTT CTCCACTGCCTTCTCTACTTATTCCCCCCCACCCCTTTCGTCCCTCGTCA AACCCGGAAAACAGCTTACTCCGGTGGTAAAAATCGACGGTCGTCAGATC GGGGACGGCCGACCAGGGCCTCTGACCGCACGCCTCAGGGAAGCGTTCGC TGAGATGACTGATCGCGAAGAATTAGGGACACCCCTCCCGCCGTTCGCAT AATAACGTCCCTGCGAAGGGTTTTGCCGTGCTGCTTTGACTCTTGGGGTG GTGCCGGGGGGGCGACGGTGATTGGAGTTCATGCACTTTTTAGGGTTCAG AGGAGGAAGTTGTACGCAACCCAGCAGCCGGCAGAGCGTCGCAGACATTC AGTCAGCATTTAGATAGGCGTCCAGACAGAATCGGTGCTCGGGGCCACCC ATCTCAGTTGGAGGTAGTGGTTCGCTTACCCGCTGTAGCTGCTATCAGAT GGAGAGAGCAAGAGCAGTACAAACGGTATGTAGACGATTTTATTGTCCTG ATCGTGCCTGTAGGCGCGATGGCTTTCTTTTTATTTTCTCAAAGTAACCG TTTCCGAGAGACGGGGAACTTCAAGGTGTATAGGCCGCGTGGGTGCTTTG GTGGGGGCGATTTGCAGATTTCAGCGCCTAGAGCGCGCGCGCCTTGCGAT CTGCAGGTGTTGCTGTAACGCTTCCCCGAGAATCTTACCTTAAAGTGGTT GAAGGAGAGAGAGATGATCCAGCTCGGGGAGTCGGAACCACTGCAATATG TTGTTTCGATTTGGGACGTTGACTTGATTTTAGTAGAATTCACCCAATTG AACGTTGTCCAAGTTTTCACCCGAATGGTTGCTACGCACCTGCCGAGATT GAGACTAACGCTGCCAAGTAAAGCCATGTGTGGTCAAAAGCATGAATGAT AGAGATGTCTACAGCTAGCTGCCGAGGTAATAATGCTAATTCTGGAG
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Coding sequence (CDS) from alignment at P-lacustris_contig1139:17820..34066+

>mRNA_P-lacustris_contig1139.1095.1 ID=mRNA_P-lacustris_contig1139.1095.1|Name=mRNA_P-lacustris_contig1139.1095.1|organism=Pleurocladia lacustris SAG_25_93|type=CDS|length=2226bp|location=Sequence derived from alignment at P-lacustris_contig1139:17820..34066+ (Pleurocladia lacustris SAG_25_93)
ATGATGGTGCCAAAGGGGGGCAAGCTGCTGGATGACGGTACGGTTCGGAT
CAACGTCTGGGCAACCCCACGCTCGCTGAGCACCGCTCTGATGTACTCCT
TTGCACAGGTGCCAAAGGGGGGCAAGCTGCTGGATGACGGTACGGTTCGG
ATCAACGTCTGGGCAACCCCACGCTCGCTGAGCACCGCTCTGATGTACTC
CTTTGCACAGAGGCCAGACTGCATCGTCTACGACGAGCCATTGTACGCAC
ACTTCCTTCGGACGCATCCGGAGGAAGAGACGTGGCGGCCTTACCGAGAA
AAGGTCTTCAAGGAACAGAGGCCAGACTGCATCGTCTACGACGAGCCATT
GTACGCACACTTCCTTCGGACGCATCCGGAGGAAGAGACGTGGCGGCCTT
ACCGAGAAAAGGTCTTCAAGGAACAGGATTCCGACGGAGACCGGTGGATC
AGGGAGGTAGCGCTGGGCTCAACGCCCAAGCCTGTGGTCTACATGAAACA
CATGGCCAAGCAGGATTCCGACGGAGACCGGTGGATCAGGGAGGTAGCGC
TGGGCTCAACGCCCAAGCCTGTGGTCTACATGAAACACATGGCCAAGCAG
ATGAGGAACCTGGATCTATCTTTCCTGCCCAAGTGCCGAAACATTCTCCA
GATCAGGACCCCGATACACATGCTGCCTTCCTGGGACTCCAACATTCACG
CGAACCTCAAGGAGATGAGGAACCTGGATCTATCTTTCCTGCCCAAGTGC
CGAAACATTCTCCAGATCAGGACCCCGATACACATGCTGCCTTCCTGGGA
CTCCAACATTCACGCGAACCTCAAGGAGATCGGTATGTTGGAACTCTTGC
ACCTGTACTCCCTAGTACGCGCGATGGGCCAGATCGGTATGTTGGAACTC
TTGCACCTGTACTCCCTAGTACGCGCGATGGGCCAGGAACCAGTAGTGAT
CGACGCTGAGCTGCTCCTCGCCAATCCGGAGGGTGTCCTGCGGGAGGTGT
CAGAGATGATCGGCATCCCGTACGCCCCGGAACAGCTGAGCTGGGAGGCT
GGACCCAAGCCCTATGACGGCTGCTGGGCGTACGTCTGGAACCAGTAGTG
ATCGACGCTGAGCTGCTCCTCGCCAATCCGGAGGGTGTCCTGCGGGAGGT
GTCAGAGATGATCGGCATCCCGTACGCCCCGGAACAGCTGAGCTGGGAGG
CTGGACCCAAGCCCTATGACGGCTGCTGGGCGTACGTCTGGTACAAGGGT
GTCAGGCAGTCGACCTGCTTTGACAACTCCCCTCGCTACGTCAAGTTCGA
CCAGAACCTGGCGCCGCTCATGGAGGTACAAGGGTGTCAGGCAGTCGACC
TGCTTTGACAACTCCCCTCGCTACGTCAAGTTCGACCAGAACCTGGCGCC
GCTCATGGAGGAGTGTATGCCGATCTACCAGCTCCTGCGATCCAAGGCCA
TCACGGGTTTTGGCAAGCTTGGCAAGGAGTGTATGCCGATCTACCAGCTC
CTGCGATCCAAGGCCATCACGGGTTTTGGCAAGCTTGGCAAGGTGCAGCG
TCCGTTGGCGAAAGAGGCCGTCAACGCGGCAAGGGACGAGAAAGCGGAGA
GTGCAGCTGCCGGGAACGACGACATCCTGGTGTGGGTTGGTGGGGGGCTA
GTGCCTCGCGACATGGCCAAGGTGCAGCGTCCGTTGGCGAAAGAGGCCGT
CAACGCGGCAAGGGACGAGAAAGCGGAGAGTGCAGCTGCCGGGAACGACG
ACATCCTGGTGTGGGTTGGTGGGGGGCTAGTGCCTCGCGACATGGCCAAG
GTGTCTGTGTTCGACTCATCGGTGCAGGGCGCGATGTGTGGGAAGGTATT
CGGGTGTACAGGGAAGAATATTCTGCCTCGACAGGTGTCTGTGTTCGACT
CATCGGTGCAGGGCGCGATGTGTGGGAAGGTATTCGGGTGTACAGGGAAG
AATATTCTGCCTCGACAGGCACCTACGGCGACTACAAGACTCCGCCCACG
CCCTCGCCTTCAAGGCGATCCCTTCGTCGGACGACATCACGGTGGCGATC
ATGGCTACGCTAGCCGCCAACAATATGGTGGACGGAGCCCACGCTAGGCA
CCTACGGCGACTACAAGACTCCGCCCACGCCCTCGCCTTCAAGGCGATCC
CTTCGTCGGACGACATCACGGTGGCGATCATGGCTACGCTAGCCGCCAAC
AATATGGTGGACGGAGCCCACGCTAG
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