mRNA_P-lacustris_contig1127.1022.1 (mRNA) Pleurocladia lacustris SAG_25_93
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Overview
Homology
BLAST of mRNA_P-lacustris_contig1127.1022.1 vs. uniprot
Match: A0A6H5JSF5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSF5_9PHAE) HSP 1 Score: 234 bits (598), Expect = 2.420e-68 Identity = 120/195 (61.54%), Postives = 154/195 (78.97%), Query Frame = 1
Query: 7 TSFYHRLLFATILPLVILLVLAGAYRIAKERNKNSELALIAVKDKHLSAALFVVFFVYSSVSFTIFQTFICDTLDDGKSYLRADYNLTCSGSRHTAYVTFAVVMALVYPIGIPFVAARWLFAHKEDLKKADRDSIPGLAPFSSVWASYKPSRYYYEVVEFGRRLALTGVAVFAYPGSSAQIAIVLLLAAVFLFVS 591
T F+ RLL ATI P+V+L +LA + + ++RN +SE A+ AVK+KHLSAALFV+FF+YSSVSFT+FQTF+CDTLDDG SYLRADY+LTC R+ A+ +A VM VYPIGIP A L ++++DL+KADRD + L P +W +YKPSRYYYE++E+ RR+ LTGVAVF PGSSAQ+A+VLLLA VFLF+S
Sbjct: 763 TDFFDRLLIATIGPVVVLALLALTFVVGRKRNIDSEAAVRAVKNKHLSAALFVMFFIYSSVSFTVFQTFVCDTLDDGVSYLRADYSLTCDTPRYGAFRGYAAVMVCVYPIGIPATFAWLLGSNRQDLQKADRDRLANLQPLGDLWEAYKPSRYYYEIIEYVRRIVLTGVAVFVLPGSSAQMAVVLLLAVVFLFIS 957
BLAST of mRNA_P-lacustris_contig1127.1022.1 vs. uniprot
Match: D7FTT9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTT9_ECTSI) HSP 1 Score: 218 bits (554), Expect = 5.500e-62 Identity = 113/195 (57.95%), Postives = 146/195 (74.87%), Query Frame = 1
Query: 7 TSFYHRLLFATILPLVILLVLAGAYRIAKERNKNSELALIAVKDKHLSAALFVVFFVYSSVSFTIFQTFICDTLDDGKSYLRADYNLTCSGSRHTAYVTFAVVMALVYPIGIPFVAARWLFAHKEDLKKADRDSIPGLAPFSSVWASYKPSRYYYEVVEFGRRLALTGVAVFAYPGSSAQIAIVLLLAAVFLFVS 591
T+FY RLL ATI P+++L +L Y +A+ RN++ E A+ V+ +HLS LFV+F +Y++VS+TIF+TF+CDTLDDG SYLRADY+LTC HTAY +A + LVYP+GIP V WLF ++ +LK+ DR+S L P + +W YKPS YYYEVVE RR+ALTG AVF YP SSAQ+AIVLLLAAVF+ VS
Sbjct: 771 TNFYDRLLMATIGPVLVLGLLGCTYLVARRRNRHCEEAMRDVQRRHLSVTLFVMFVIYAAVSYTIFETFVCDTLDDGNSYLRADYSLTCDTPLHTAYRVYAGLAVLVYPVGIPCVFGWWLFKNRHELKQEDRESQAELRPAADLWEPYKPSAYYYEVVECFRRIALTGFAVFIYPDSSAQVAIVLLLAAVFMVVS 965
BLAST of mRNA_P-lacustris_contig1127.1022.1 vs. uniprot
Match: D7FPF7_ECTSI (Probable extracellular nuclease (ISS) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPF7_ECTSI) HSP 1 Score: 206 bits (524), Expect = 1.940e-61 Identity = 109/203 (53.69%), Postives = 140/203 (68.97%), Query Frame = 1
Query: 7 TSFYHRLLFATILPLVILLVLAGAYRIAKERNKNSELALIAVKDKHLSAALFVVFFVYSSVSFTIFQTFICDTLDDGKSYLRADYNLTCSGSRHTAYVTFAVVMALVYPIGIPFVAARWLFAHKEDLKKADRD--------SIPGLAPFSSVWASYKPSRYYYEVVEFGRRLALTGVAVFAYPGSSAQIAIVLLLAAVFLFVS 591
T+FY RLLFATI PLV+L LA Y +++ RN++S + K KHLS ALF++F VYSSVSF IFQTF+C+TLDDG YLRADY+L CS HTA +A +M VYP GIP WL +++ DL K D + S+ L P +WA YKP RYY+EVVE GRR+ALTG+AVF YPGS+AQ+A+ ++ AA F+ +S
Sbjct: 115 TNFYGRLLFATIGPLVVLGALALTYAVSRSRNRHSPAGIQTAKHKHLSIALFIMFVVYSSVSFNIFQTFVCETLDDGVEYLRADYSLVCSTDTHTAMKVYAGLMIFVYPFGIPAFFTLWLVSNRHDLVKVDANGGSTATAKSLGNLQPMRDLWAPYKPRRYYFEVVECGRRIALTGLAVFIYPGSAAQVALEVVFAAFFIGIS 317
BLAST of mRNA_P-lacustris_contig1127.1022.1 vs. uniprot
Match: A0A6H5L324_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L324_9PHAE) HSP 1 Score: 215 bits (548), Expect = 3.520e-61 Identity = 111/195 (56.92%), Postives = 145/195 (74.36%), Query Frame = 1
Query: 7 TSFYHRLLFATILPLVILLVLAGAYRIAKERNKNSELALIAVKDKHLSAALFVVFFVYSSVSFTIFQTFICDTLDDGKSYLRADYNLTCSGSRHTAYVTFAVVMALVYPIGIPFVAARWLFAHKEDLKKADRDSIPGLAPFSSVWASYKPSRYYYEVVEFGRRLALTGVAVFAYPGSSAQIAIVLLLAAVFLFVS 591
T+FY RLL ATI P+++L +L Y +A+ RN++ E A+ V+ +HLS LFV+F +Y++VS+TIF+TF+CDTLDDG SYLRADY+LTC HTAY +A + LVYP+GIP + WLF ++ +LK+ DR+ L P + +W YKPS YYYEVVE RR+ALTG AVF YP SSAQ+AIVLLLAAVF+ VS
Sbjct: 752 TNFYDRLLMATIGPVLVLGLLGCTYVVARRRNRHCEEAMRDVQRRHLSVTLFVMFVIYAAVSYTIFETFVCDTLDDGNSYLRADYSLTCDTPLHTAYRVYAGLAVLVYPVGIPCIFGWWLFKNRHELKQEDREGQAELRPAADLWEPYKPSAYYYEVVECFRRIALTGFAVFIYPDSSAQVAIVLLLAAVFMVVS 946
BLAST of mRNA_P-lacustris_contig1127.1022.1 vs. uniprot
Match: D7FUB5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUB5_ECTSI) HSP 1 Score: 197 bits (501), Expect = 2.730e-58 Identity = 103/187 (55.08%), Postives = 135/187 (72.19%), Query Frame = 1
Query: 4 RTSFYHRLLFATILPLVILLVLAGAYRIAKERNKNSELALIAVKDKHLSAALFVVFFVYSSVSFTIFQTFICDTLDDGKSYLRADYNLTCSGSRHTAYVTFAVVMALVYPIGIPFVAARWLFAHKEDL--KKADRDSIP-GLAPFSSVWASYKPSRYYYEVVEFGRRLALTGVAVFAYPGSSAQIAI 555
T+FY RL F+T+LPL IL LA + IAK N++S++ + DKHLS ALF+VF YSSVSFTIFQTF+C+TLDD YLRADY+LTCS S HT +A +M LVYPIGIP V A WL ++++DL +++ + P L P +W YKP RY+YE+VE GRR+ LTG+AVF +PG++AQ+AI
Sbjct: 72 ETNFYGRLAFSTLLPLAILGGLAATHAIAKRNNRHSQVGMREATDKHLSIALFIVFATYSSVSFTIFQTFMCETLDDEVEYLRADYSLTCSTSTHTIMEVYAGLMVLVYPIGIPAVFAWWLASNRKDLVRERSSGTATPENLRPMKDLWEPYKPRRYFYELVECGRRIGLTGLAVFLFPGTAAQVAI 258
BLAST of mRNA_P-lacustris_contig1127.1022.1 vs. uniprot
Match: A0A6H5KHA3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHA3_9PHAE) HSP 1 Score: 197 bits (501), Expect = 5.580e-58 Identity = 102/187 (54.55%), Postives = 133/187 (71.12%), Query Frame = 1
Query: 4 RTSFYHRLLFATILPLVILLVLAGAYRIAKERNKNSELALIAVKDKHLSAALFVVFFVYSSVSFTIFQTFICDTLDDGKSYLRADYNLTCSGSRHTAYVTFAVVMALVYPIGIPFVAARWLFAHKEDL---KKADRDSIPGLAPFSSVWASYKPSRYYYEVVEFGRRLALTGVAVFAYPGSSAQIAI 555
T+FY RL F+TI+PL IL LA + IAK N++S++ + DKHLS ALF+VF +YSSVSFTIFQTF+C+TLDD YLRADY+LTCS S HT +A +M LVYPIGIP V A WL ++++DL + + L P +W YKP RY+YE+VE GRR+ LTG+AVF +PG++AQ+AI
Sbjct: 94 ETNFYGRLAFSTIVPLAILGGLAAKHAIAKRNNRHSQVGMREATDKHLSIALFIVFAIYSSVSFTIFQTFMCETLDDEVEYLRADYSLTCSTSTHTIMEVYAGLMVLVYPIGIPAVFAWWLASNRKDLVQDRSGGTTTPENLRPMKDLWEPYKPRRYFYELVECGRRIVLTGLAVFLFPGTAAQVAI 280
BLAST of mRNA_P-lacustris_contig1127.1022.1 vs. uniprot
Match: A0A6H5JWI3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWI3_9PHAE) HSP 1 Score: 200 bits (509), Expect = 5.320e-56 Identity = 106/202 (52.48%), Postives = 140/202 (69.31%), Query Frame = 1
Query: 10 SFYHRLLFATILPLVILLVLAGAYRIAKERNKNSELALIAVKDKHLSAALFVVFFVYSSVSFTIFQTFICDTLDDGKSYLRADYNLTCSGSRHTAYVTFAVVMALVYPIGIPFVAARWLFAHKEDLKKADRDS--------IPGLAPFSSVWASYKPSRYYYEVVEFGRRLALTGVAVFAYPGSSAQIAIVLLLAAVFLFVS 591
+FY RL F T+ PLV+ LA Y I++ RN++S + A K KHLS ALF+ F VYSSVSF IFQTF+C+TLDDG +YLRADY+LTCS HTA + +A +M LVYP+GIP V + WL +++ DL K + L P +W+SYKP RYY+EV+E GRR+ALTG+A F P S+AQ+AI ++LAA+F+ VS
Sbjct: 792 NFYGRLFFTTVGPLVVFGGLAATYAISRSRNRHSPAGMQAAKSKHLSIALFISFVVYSSVSFNIFQTFVCETLDDGVTYLRADYSLTCSTGVHTAMMAYAGLMILVYPVGIPTVYSWWLLSNRHDLVKVGTSGNCLGGAPRLDHLQPMRDLWSSYKPRRYYFEVLECGRRIALTGLAAFLLPDSAAQVAIEVVLAAIFMAVS 993
BLAST of mRNA_P-lacustris_contig1127.1022.1 vs. uniprot
Match: D7FTU5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTU5_ECTSI) HSP 1 Score: 200 bits (508), Expect = 8.300e-56 Identity = 108/195 (55.38%), Postives = 134/195 (68.72%), Query Frame = 1
Query: 7 TSFYHRLLFATILPLVILLVLAGAYRIAKERNKNSELALIAVKDKHLSAALFVVFFVYSSVSFTIFQTFICDTLDDGKSYLRADYNLTCSGSRHTAYVTFAVVMALVYPIGIPFVAARWLFAHKEDLKKADRDSIPGLAPFSSVWASYKPSRYYYEVVEFGRRLALTGVAVFAYPGSSAQIAIVLLLAAVFLFVS 591
T FY RLL TI P V+L +L Y LA+ VK +HLS ALF++F +Y++VS+TIF+TF+CD LDDG SYLR+DY+LTC HTAY +A +M LVYP+GIP V WLF H+ +LK+ R+ L P + +W YKPS YYYEVVE RR+ALTG AVF YP SSAQ+AIVLLLA VF+ VS
Sbjct: 776 TDFYDRLLLTTICPAVVLGLLGCTY-----------LAMGVVKHRHLSVALFIMFVIYATVSYTIFETFVCDPLDDGNSYLRSDYSLTCDTETHTAYRVYAGLMILVYPVGIPCVFGWWLFKHRHELKQEGRERRAVLKPAADLWEPYKPSTYYYEVVECFRRIALTGFAVFIYPDSSAQVAIVLLLAIVFMVVS 959
BLAST of mRNA_P-lacustris_contig1127.1022.1 vs. uniprot
Match: A0A6H5JY65_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY65_9PHAE) HSP 1 Score: 184 bits (468), Expect = 1.960e-50 Identity = 97/199 (48.74%), Postives = 128/199 (64.32%), Query Frame = 1
Query: 4 RTSFYHRLLFATILPLVILLVLAGAYRIAKERNKNSELALIAVKDKHLSAALFVVFFVYSSVSFTIFQTFICDTLDDGKSYLRADYNLTCSGSRHTAYVTFAVVMALVYPIGIPFVAARWLFAHKEDLKKAD---RDSIPGLAPFSSVWASYKPSRYYYEVVEFGRRLALTGVAVFAYPGSSAQIAIVLLLAAVFLFVS 591
F+ RLL ATI PLV L +LA Y +AK R+ SE AL ++ KH+S L + F VYSSVS T+FQ+F C+ LDD K YLRADY + C S H A+ FA +M LVYP+GIP L+ H+ LK D R + P + P S +W YKP R+YYEV+E RR++LTGV VF YP ++AQ+A+ L++A F+ S
Sbjct: 1485 EVDFHGRLLVATIGPLVALALLAITYTVAKRRSSGSEAALQKIRHKHMSMVLLITFLVYSSVSATVFQSFACEDLDDHKKYLRADYRIECDSSEHQAFQVFAGIMILVYPVGIPLFYGYLLYKHRRVLKSEDAGKRQTSPQVQPISDLWFPYKPGRFYYEVIECVRRMSLTGVVVFIYPNTAAQVAVTLMIAFSFVVTS 1683
BLAST of mRNA_P-lacustris_contig1127.1022.1 vs. uniprot
Match: D7G8S0_ECTSI (Probable extracellular nuclease (ISS) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8S0_ECTSI) HSP 1 Score: 173 bits (439), Expect = 9.540e-50 Identity = 97/203 (47.78%), Postives = 126/203 (62.07%), Query Frame = 1
Query: 7 TSFYHRLLFATILPLVILLVLAGAYRIAKERNKNSELALIAVKDKHLSAALFVVFFVYSSVSFTIFQTFICDTLDDGKSYLRADYNLTCSGSRHTAYVTFAVVMALVYPIGIPFVAARWLFAHKEDLKKADRDS--------IPGLAPFSSVWASYKPSRYYYEVVEFGRRLALTGVAVFAYPGSSAQIAIVLLLAAVFLFVS 591
++FY FATI PLV+ A Y ++K RN++S + A K KHLS LF++F VYSSV F IFQTF+C+ LD G YLRADY+LTC H A + +A +M VYP+GIP A WL + L K + + L P +WA YKP RYY+EVVE G R+ALTG+A F P S+AQ AI ++LAA+F+ VS
Sbjct: 80 SNFYGCRFFATICPLVVFGAQAVTYTVSKSRNRHSPAGMQAAKSKHLSITLFIMFVVYSSVPFNIFQTFVCERLDTGMDYLRADYSLTCYTGVHKAMMVYAGLMIFVYPVGIPAFYAWWLLFIRHYLVKVGAPNNFLERVPELDHLQPMRDLWAPYKPHRYYFEVVECGHRIALTGLAAFLLPNSAAQAAIEVVLAAIFVAVS 282 The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig1127.1022.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-lacustris_contig1127.1022.1 >prot_P-lacustris_contig1127.1022.1 ID=prot_P-lacustris_contig1127.1022.1|Name=mRNA_P-lacustris_contig1127.1022.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=197bp MRTSFYHRLLFATILPLVILLVLAGAYRIAKERNKNSELALIAVKDKHLSback to top mRNA from alignment at P-lacustris_contig1127:19697..20287+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-lacustris_contig1127.1022.1 ID=mRNA_P-lacustris_contig1127.1022.1|Name=mRNA_P-lacustris_contig1127.1022.1|organism=Pleurocladia lacustris SAG_25_93|type=mRNA|length=591bp|location=Sequence derived from alignment at P-lacustris_contig1127:19697..20287+ (Pleurocladia lacustris SAG_25_93)back to top Coding sequence (CDS) from alignment at P-lacustris_contig1127:19697..20287+ >mRNA_P-lacustris_contig1127.1022.1 ID=mRNA_P-lacustris_contig1127.1022.1|Name=mRNA_P-lacustris_contig1127.1022.1|organism=Pleurocladia lacustris SAG_25_93|type=CDS|length=1182bp|location=Sequence derived from alignment at P-lacustris_contig1127:19697..20287+ (Pleurocladia lacustris SAG_25_93)back to top |