mRNA_P-lacustris_contig1124.1006.1 (mRNA) Pleurocladia lacustris SAG_25_93
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Overview
Homology
BLAST of mRNA_P-lacustris_contig1124.1006.1 vs. uniprot
Match: D7G5L2_ECTSI (ATP-dependent DNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5L2_ECTSI) HSP 1 Score: 679 bits (1752), Expect = 1.330e-238 Identity = 360/429 (83.92%), Postives = 383/429 (89.28%), Query Frame = 3
Query: 954 CAGTGKSLVLNRILAKLAEAGVPSGAVYPTATTGLAACHVKGTTLQQFAGIGKAL---GSGEEMLKVVKKRPGAVRRWKAVQVLIVDEISMLDGDTFDALEFVARSLRGVKAPFGGIRLVLSGDFFQLPPVCRNGAPEKKLCFEASSWKACVQETVELKLVFRQRDDKFVKLLSKIRWGQCTPEVLAELRGRSTAHNNNNNDNGKVGGGPTQG--VDDGIEKTQLLTHKADVLRVNEERLAQLDGSEIVSKAENRGNRPDYLKQLDDSCSAPATLRLKAGAQVILVKNLATGRGLANGSRGVVVRFAMSTSSGARLPVVRFASGLEEVMRPEEFPLYVGGAVVASRRQLPLALAWALSVHRSQGMSLDRASVCLSRAFEYGQAYVALSRVRSLEGLSIVGTIDPSKIRAHLRVVTFYRNLRHERHAALQ 2225
CAGTGKSLVLNRILAKL EAGVP GAVYPTATTGLAACHVKGTTLQQF+GIGKA GS EE+LK V++RP AVRRWKAVQVLIVDEISMLDGDTFDALEFVARS+RGV APFGG+R+VLSGDFFQLPPV R G PEKKLCFEA SWKACVQETVELKLVFRQ+D+ FVKLLSK+RWGQCTPEVLA+LR S A N+ N NG VDDGIEKTQLLTHKADVL+VNEERL +LDG+E+VSKAENRGNRPD L+QLDDSCSAPATLRLK GAQV+LVKNLATGRGLANGSRGVVVRFA STSSGARLPVVRFASGLEEV+RPEEF LYVGG VASRRQLPLALAWALSVH+SQGMSLDRASVCLSRAFEYGQAYVALSRVRSLEGLS+VGTIDPSKIRAH RVV+FYR L ER AL+
Sbjct: 4 CAGTGKSLVLNRILAKLFEAGVPGGAVYPTATTGLAACHVKGTTLQQFSGIGKAAACGGSPEEVLKAVRRRPDAVRRWKAVQVLIVDEISMLDGDTFDALEFVARSIRGVDAPFGGVRIVLSGDFFQLPPVSRKGEPEKKLCFEARSWKACVQETVELKLVFRQQDNSFVKLLSKVRWGQCTPEVLAKLR--SCAENSITNANGXXXXXXXXXXXVDDGIEKTQLLTHKADVLKVNEERLGRLDGAEVVSKAENRGNRPDILRQLDDSCSAPATLRLKVGAQVMLVKNLATGRGLANGSRGVVVRFAKSTSSGARLPVVRFASGLEEVIRPEEFHLYVGGQAVASRRQLPLALAWALSVHKSQGMSLDRASVCLSRAFEYGQAYVALSRVRSLEGLSVVGTIDPSKIRAHPRVVSFYRALSRERKEALR 430
BLAST of mRNA_P-lacustris_contig1124.1006.1 vs. uniprot
Match: A0A8J9S3Z5_9CHLO (ATP-dependent DNA helicase PIF1 n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9S3Z5_9CHLO) HSP 1 Score: 382 bits (980), Expect = 5.500e-120 Identity = 222/438 (50.68%), Postives = 281/438 (64.16%), Query Frame = 3
Query: 882 LSLSEDQQNAVDLVVGGKSVFFTGCAGTGKSLVLNRILAKLAEAGVPSGAVYPTATTGLAACHVKGTTLQQFAGIGKALGSGEEMLKVVKKRPGAVRRWKAVQVLIVDEISMLDGDTFDALEFVARSLRGVKAPFGGIRLVLSGDFFQLPPVC--RNGAPEKKLCFEASSWKACVQETVELKLVFRQRDDKFVKLLSKIRWGQCTPEVLAELRGRSTAHNNNNNDNGKVGGGPTQGVDDGIEKTQLLTHKADVLRVNEERLAQLDGSEIVSKAENRGNRPDYLKQLDDSCSAPATLRLKAGAQVILVKNLATGRGLANGSRGVVVRFAMSTSSGARLPVVRFASGLEEVMRPEEFPLYVGGAVVASRRQLPLALAWALSVHRSQGMSLDRASVCLSRAFEYGQAYVALSRVRSLEGLSIVGTIDPSKIRAHLRVVTFY 2189
L+LS +QQ VDLVV GKSVFFTGCAGTGKSLV+ IL L P Y TA+TGLAA + GTTL FAGIG+A G + MLK+ RP A +RW+ LI+DEISM+DGD D+LE VARS+R K PFGG++LVL+GDF QLPPV R ++ FEA W CV + L V+RQ D +FV +LS +R GQC+ VL +L+ R G+ DGI T+L TH DV +N LA+L+G + A++ GN PD LK +C+A + LKAGAQV+L +N++ RGL NG+RGVV RF T RLP+VRFASGLE + E++ + G V+A+R Q+PLA AWALSVH+SQGM+LDR V L+RAFE G AYVALSR RSL+GL I G I P ++A +V+ FY
Sbjct: 184 LALSPEQQRVVDLVVSGKSVFFTGCAGTGKSLVIKHILRAL-----PPATTYLTASTGLAASALGGTTLNAFAGIGRAEGGLQGMLKMAS-RPDAAKRWRTAATLIIDEISMVDGDMLDSLEEVARSVRRCKQPFGGLQLVLTGDFHQLPPVAKGRQAMAARRFAFEAHCWNRCVSACMLLTKVYRQADREFVDILSAVRGGQCSAAVLDKLKDRCRR---------------PLGLLDGILPTKLYTHTDDVDTINSRHLAELNGEAVRFVAQDSGN-PDALKS---ACNAKQVVELKAGAQVMLTRNISANRGLVNGARGVVERFVGKT---IRLPIVRFASGLEVTVGKEQWTIKSGNRVLATRTQIPLACAWALSVHKSQGMTLDRVEVNLARAFEAGMAYVALSRARSLQGLHISGDIHPHALQADPKVIAFY 593
BLAST of mRNA_P-lacustris_contig1124.1006.1 vs. uniprot
Match: A0A2P6TVH0_CHLSO (ATP-dependent DNA helicase n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TVH0_CHLSO) HSP 1 Score: 375 bits (962), Expect = 1.270e-116 Identity = 222/448 (49.55%), Postives = 293/448 (65.40%), Query Frame = 3
Query: 885 SLSEDQQNAVDLVVGGKSVFFTGCAGTGKSLVLNRILAKLAEAGVPSGAVYPTATTGLAACHVKGTTLQQFAGIGKALGSGEEMLKVVKKRPGAVRRWKAVQVLIVDEISMLDGDTFDALEFVARSLRGVKAPFGGIRLVLSGDFFQLPPVCR--NGAPEKKLCFEASSWKACVQETVELKLVFRQRDDKFVKLLSKIRWGQCTPEVLAELRGRSTAHNNNNNDNGKVGGGPTQGVDDGIEKTQLLTHKADVLRVNEERLAQLDGSEIVSKAENRGNRPDYLKQLDDSCSAPATLRLKAGAQVILVKNLATGRGLANGSRGVVVRFAMSTSSGARLPVVRFASGLEEVMRPEEFPLYVGGAVVASRRQLPLALAWALSVHRSQGMSLDRASVCLSRAFEYGQAYVALSRVRSLEGLSIVGTIDPSKIRAHLRVVTFYRNLRHERHAAL 2222
+LS++QQ A+ LV G+S+FFTGCAGTGKSL+L IL L P + T TTGLAACH+ GTT+ FAGIG+A GS E +++ R +++RW+A LI+DE+SM+DG FDALE VAR +RG APFGGI+L+LSGDF QLPPV + + A ++K CFEA SW CV E L VFRQ D++FV++L++IR G C + L+ L R+ P V+DGI T+L TH+ DV +N ++L L G A++ G+ PD L +C A TL LK GAQV+L++N++ +GL NG+RGVV RF+ S + LPVVRFASG + E + + GG + A R QLPL LAWA +VH+SQGM+LDRA V L +AFE G AYVALSRV+SL+GL I+G+I P +RA +VV FYR LR + AAL
Sbjct: 226 ALSDEQQRALQLVQSGRSIFFTGCAGTGKSLLLRHILRVL-----PRDTTFVTGTTGLAACHLGGTTINSFAGIGRAEGSLEALMRSAA-RGESLQRWRATTHLIIDEVSMMDGRLFDALEHVARKVRGSNAPFGGIQLILSGDFHQLPPVAKGKDAASQRKFCFEAESWARCVHECCFLSKVFRQADNEFVEMLARIRSGDCPRDKLSHLL-RTCQR-------------PLP-VEDGILPTKLYTHREDVDALNAQQLRALPGEARRFVAQDAGS-PDVLAA---ACPARRTLDLKVGAQVMLIRNISHRQGLVNGARGVVERFSESQN----LPVVRFASGKVLTIGRERWTVASGGRLAAQRVQLPLDLAWATTVHKSQGMTLDRAEVSLEKAFEPGMAYVALSRVKSLDGLRILGSIAPQALRADAKVVAFYRKLRERQLAAL 644
BLAST of mRNA_P-lacustris_contig1124.1006.1 vs. uniprot
Match: A0A2P6VG44_9CHLO (ATP-dependent DNA helicase n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VG44_9CHLO) HSP 1 Score: 369 bits (946), Expect = 2.780e-114 Identity = 220/447 (49.22%), Postives = 285/447 (63.76%), Query Frame = 3
Query: 888 LSEDQQNAVDLVVGGKSVFFTGCAGTGKSLVLNRILAKLAEAGVPSGAVYPTATTGLAACHVKGTTLQQFAGIGKALGSGEEMLKVVKKRPGAVRRWKAVQVLIVDEISMLDGDTFDALEFVARSLRGVKAPFGGIRLVLSGDFFQLPPVC--RNGAPEKKLCFEASSWKACVQETVELKLVFRQRDDKFVKLLSKIRWGQCTPEVLAELRGRSTAHNNNNNDNGKVGGGPTQGVDDGIEKTQLLTHKADVLRVNEERLAQLDGSEIVSKAENRGNRPDYLKQLDDSCSAPATLRLKAGAQVILVKNLATGRGLANGSRGVVVRFAMSTSSGARLPVVRFASGLEEVMRPEEFPLYVGGAVVASRRQLPLALAWALSVHRSQGMSLDRASVCLSRAFEYGQAYVALSRVRSLEGLSIVGTIDPSKIRAHLRVVTFYRNLRHERHAAL 2222
LS++QQ A+ LV G+S+FFTGCAGTGKSL+L IL L P + T TTGLAACH+ GTT+ +AGIG+ GS E ++++ R +++RW+A LIVDE+SM+DG FD LE VAR +RG APFGGI+L+LSGDF QLPPV R GA ++K CFEA SW C+ E+ L VFRQ D++FV LL KIR G C + +++L K P DDGI T+L TH+ DV +N ++L L A++ G+ + L +C A TL LK GAQV L+KN++ +GL NG+RGVV +F + S G LPVVRFA+G + E + + GG + A R QLPL LAWA+SVH+SQG++LDRA V L RAFE G AYVALSRVRSLEGL I+G+I +RA +VV FY LR + AAL
Sbjct: 225 LSDEQQRALQLVQSGRSIFFTGCAGTGKSLLLRHILRCL-----PRNTTFVTGTTGLAACHLGGTTINSYAGIGRGEGSLESLVRMAG-RGESLQRWRATTHLIVDEVSMMDGRLFDTLEAVARKVRGSAAPFGGIQLILSGDFHQLPPVAKGREGAAQRKFCFEAESWARCIPESCFLSKVFRQSDNEFVDLLGKIRSGSCPQDKVSQLL--------------KTCARPLP-TDDGILPTKLFTHREDVDLINAQQLKALPSEPHKFVAQDVGSG----EVLAAACPARRTLELKVGAQVTLIKNISQRQGLVNGARGVVEKF--NDSQG--LPVVRFANGRVLTISRERWTIASGGRLAAQRVQLPLDLAWAMSVHKSQGLTLDRAEVSLERAFEPGMAYVALSRVRSLEGLRIIGSIAAQALRADPKVVLFYTRLRQRQLAAL 642
BLAST of mRNA_P-lacustris_contig1124.1006.1 vs. uniprot
Match: A0A8C2VKX3_CHILA (ATP-dependent DNA helicase PIF1 n=2 Tax=Chinchilla lanigera TaxID=34839 RepID=A0A8C2VKX3_CHILA) HSP 1 Score: 356 bits (914), Expect = 3.630e-111 Identity = 210/444 (47.30%), Postives = 273/444 (61.49%), Query Frame = 3
Query: 870 PPRELSLSEDQQNAVDLVVGGKSVFFTGCAGTGKSLVLNRILAKLAEAGVPSGAVYPTATTGLAACHVKGTTLQQFAGIGKALGSGEEMLKVVKKRPGAVRRWKAVQVLIVDEISMLDGDTFDALEFVARSLRGVKAPFGGIRLVLSGDFFQLPPVCRNGAPEKKLCFEASSWKACVQETVELKLVFRQRDDKFVKLLSKIRWGQCTPEVLAELRGRSTAHNNNNNDNGKVGGGPTQGVDDGIEKTQLLTHKADVLRVNEERLAQLDGSEIVSKAENRGNRPDYLKQLDDSCSAPATLRLKAGAQVILVKNLATGRGLANGSRGVVVRFAMSTSSGARLPVVRFASGLEEVMRPEEFPLYVGGAVVASRRQLPLALAWALSVHRSQGMSLDRASVCLSRAFEYGQAYVALSRVRSLEGLSIVGTIDPSKIRAHLRVVTFYRNLR 2201
PP + LSE+Q + LV+ G+SVFFTG AGTGKS +L RIL L AG + TA+TG+AACH+ GTTL FAGIG + + + + RPG + W Q L++DEISM++ D FD LE VAR++R + PFGG++L++ GDF QLPPV + P + CF+A SW+ CV T+EL V+RQ D FV LL +R G+C+ EV +LR + AH KVG DG+ T+L TH+ DV+ NE RL +L G V E + P+ + LD C L+LK GAQV+LVKNLA RGL NG+RGVVV F + G LP VRF G+ EV+R + + + G V SR+QLPL LAWALS+H+SQGMSLD + L R F GQAYVALSR RSL+GL ++ DP + RV+ FY LR
Sbjct: 86 PPSKPQLSEEQAAVLGLVLKGQSVFFTGSAGTGKSYLLKRILGSLPPAGTVA-----TASTGVAACHIGGTTLHAFAGIGSGRAPLAQCVALAQ-RPGVRQGWLNCQRLVIDEISMVEADLFDKLEAVARAVRQQEKPFGGVQLIICGDFLQLPPVTKGSQPPR-FCFQAKSWRRCVPVTLELTEVWRQADPAFVSLLQAVRLGRCSDEVTRQLRA-TAAH--------KVGR-------DGVVATRLCTHQDDVVLTNERRLQELPGE--VHSFEALDSHPELARALDAQCPVSRLLQLKLGAQVMLVKNLAVSRGLVNGARGVVVGFE---AEGRGLPQVRFLCGVTEVIRTDRWTVQATGGQVLSRQQLPLQLAWALSIHKSQGMSLDCVEISLGRVFASGQAYVALSRARSLQGLRVLD-FDPLVVHCDARVLRFYATLR 500
BLAST of mRNA_P-lacustris_contig1124.1006.1 vs. uniprot
Match: UPI000EF6E90F (ATP-dependent DNA helicase PIF1 n=1 Tax=Athene cunicularia TaxID=194338 RepID=UPI000EF6E90F) HSP 1 Score: 355 bits (910), Expect = 2.360e-110 Identity = 216/462 (46.75%), Postives = 276/462 (59.74%), Query Frame = 3
Query: 819 RKSTRKVSPKKSMEGRGPPRELSLSEDQQNAVDLVVGGKSVFFTGCAGTGKSLVLNRILAKLAEAGVPSGAVYPTATTGLAACHVKGTTLQQFAGIGKALGSGEEMLKVVKKRPGAVRRWKAVQVLIVDEISMLDGDTFDALEFVARSLRGVKAPFGGIRLVLSGDFFQLPPVCRNGAPEKKLCFEASSWKACVQETVELKLVFRQRDDKFVKLLSKIRWGQCTPEVLAELRGRSTAHNNNNNDNGKVGGGPTQGVDDGIEKTQLLTHKADVLRVNEERLAQLDGSEIVSKAENRGNRPDYLKQLDDSCSAPATLRLKAGAQVILVKNLATGRGLANGSRGVVVRFAMSTSSGARLPVVRFASGLEEVMRPEEFPLYVGGAVVASRRQLPLALAWALSVHRSQGMSLDRASVCLSRAFEYGQAYVALSRVRSLEGLSIVGTIDPSKIRAHLRVVTFYRNLRH 2204
R+ST P++ R PP LS +Q+ +D V GKS+FFTGCAGTGKS +L +++ L P + Y TA+TG+AACH+ GTTL FAGIG E+ +++ + RPG + W A Q LI+DEISM+DG FD LE VAR++R PFGGI+L++ GDF QLPPVC+ E K CF+A SW+ C+ +EL V RQ D FV LLS +R G+CT EV +L TA N + D GI T+L THK DV NE L QL G V E + P +K +D C + LK GAQV+L KNL +GL NG+RGVVV F S LP VRF G+ +V++ E++ V SR+QLPL LAWA+S+H+SQGMSLD + LSR FE GQAYVALSR RSL GL ++ DP +RA V+ FYR LRH
Sbjct: 86 RRSTPPAVPQEPRAERRPP--ARLSAEQEAVMDAVRSGKSIFFTGCAGTGKSFLLKKVVGSL-----PPKSTYATASTGVAACHIGGTTLHAFAGIGSGKAPLEQCIQLAE-RPGVRQHWLACQHLIIDEISMVDGKFFDRLEAVARAVRKRDEPFGGIQLIICGDFLQLPPVCKANE-ETKFCFQAKSWRKCIHVNMELTEVRRQTDKTFVSLLSAVRLGRCTEEVTRQLM--QTAANRSERD--------------GILATRLCTHKDDVEITNERCLQQLSGE--VHTFEALDSDPMLVKLIDAQCPVGGRVELKLGAQVMLAKNLDVSQGLVNGARGVVVGFE---SEQKGLPKVRFLCGVTQVIKMEKWVFKGPSGVHLSRQQLPLKLAWAISIHKSQGMSLDCVEISLSRVFESGQAYVALSRARSLAGLRVLD-FDPKAVRADPSVLQFYRQLRH 516
BLAST of mRNA_P-lacustris_contig1124.1006.1 vs. uniprot
Match: A0A8C5KW85_JACJA (ATP-dependent DNA helicase PIF1 n=1 Tax=Jaculus jaculus TaxID=51337 RepID=A0A8C5KW85_JACJA) HSP 1 Score: 353 bits (907), Expect = 3.510e-110 Identity = 216/455 (47.47%), Postives = 277/455 (60.88%), Query Frame = 3
Query: 870 PPRELSLSEDQQNAVDLVVGGKSVFFTGCAGTGKSLVLNRILAKLAEAGVPSGAVYPTATTGLAACHVKGTTLQQFAGIGKALGSGEEMLK---VVKKRPGAVRRWKAVQVLIVDEISMLDGDTFDALEFVARSLRGVKAPFGGIRLVLSGDFFQLPPVCRNGAPEKKLCFEASSWKACVQETVELKLVFRQRDDKFVKLLSKIRWGQCTPEVLAELRGRSTAHNNNNNDNGKVGGGPTQGVDDGIEKTQLLTHKADVLRVNEERLAQLDGSEIVSKAENRGNRPDYLKQLDDSCSAPATLRLKAGAQVILVKNLATGRGLANGSRGVVVRFAMSTSSGARLPVVRFASGLEEVMRPEEFPLYVGGAVVASRRQLPLALAWALSVHRSQGMSLDRASVCLSRAFEYGQAYVALSRVRSLEGLSIVGTIDPSKIRAHLRVVTFYRNLRHERHAALQ 2225
P + LSE+Q + LV+ G+SVF TG AGTGKS +L RIL L P+G V TA+TG+AACH+ GTTL FAGI GSG+ L + +RPG + W Q L++DEISM++ D FD LE VAR++R PFGGI+L++ GDF QLPPV + P + CF+A SW+ CV TVEL V+RQ D F+ LL +R G+C+ EV +LR + AH KVG DGIE T+L TH+ DV NE+RL +L G V E + P+ + LD C L+LK GAQV+LVKNLA RGL NG+RGVVV F + G LP VRF G+ EV+R + + + V G SR+QLPL LAWA+S+H+SQGMSLD + L R F GQAYVALSR RSL+GL +V DP + RV+ +Y LR R L+
Sbjct: 80 PATKPQLSEEQAAVLTLVLKGQSVFLTGSAGTGKSYLLKRILGSLP----PTGTV-ATASTGVAACHIGGTTLHAFAGI----GSGQAPLAQCVALAQRPGVRQGWLNCQRLVIDEISMVEADLFDKLEAVARAVRQQNKPFGGIQLIICGDFLQLPPVTKGSRPPR-FCFQAKSWRRCVPVTVELTEVWRQADQSFISLLQAVRLGRCSDEVTRQLRA-TAAH--------KVGR-------DGIEATRLCTHQDDVALTNEKRLRELPGE--VHSFEAMDSHPELARTLDAQCPVSRHLQLKLGAQVMLVKNLAVSRGLVNGARGVVVGFQ---AEGRGLPQVRFLCGVTEVIRTDRWTVQVTGGQFVSRQQLPLQLAWAISIHKSQGMSLDCVEISLGRVFASGQAYVALSRARSLQGLRVVD-FDPMVVYCDPRVLHYYATLRRGRGRGLE 502
BLAST of mRNA_P-lacustris_contig1124.1006.1 vs. uniprot
Match: A0A7K6QIE3_9PASS (PIF1 helicase (Fragment) n=3 Tax=Passeriformes TaxID=9126 RepID=A0A7K6QIE3_9PASS) HSP 1 Score: 353 bits (906), Expect = 6.280e-110 Identity = 213/448 (47.54%), Postives = 271/448 (60.49%), Query Frame = 3
Query: 864 RGPPRELSLSEDQQNAVDLVVGGKSVFFTGCAGTGKSLVLNRILAKLAEAGVPSGAVYPTATTGLAACHVKGTTLQQFAGIGKALGSGEEMLKVVKKRPGAVRRWKAVQVLIVDEISMLDGDTFDALEFVARSLRGVKAPFGGIRLVLSGDFFQLPPVCRNGAPEKKLCFEASSWKACVQETVELKLVFRQRDDKFVKLLSKIRWGQCTPEVLAELRGRSTAHNNNNNDNGKVGGGPTQGVDDGIEKTQLLTHKADVLRVNEERLAQLDGSEIVSKAENRGNRPDYLKQLDDSCSAPATLRLKAGAQVILVKNLATGRGLANGSRGVVVRFAMSTSSGARLPVVRFASGLEEVMRPEEFPLYVGGAVVASRRQLPLALAWALSVHRSQGMSLDRASVCLSRAFEYGQAYVALSRVRSLEGLSIVGTIDPSKIRAHLRVVTFYRNLRHE 2207
R PP LS +Q+ + V GKS+FFTGCAGTGKS +L +I+ L P Y TA+TG+AACHV GTTL FAGIG E+ +++ + RPG + W A Q LI+DEISM+DG FD LE VAR++R PFGGI+L++ GDF QLPPVC+ E K CF+A SW+ C+ +EL V RQ D FV LLS IR G+CT EV +L ++ AH + DGI T+L THK DV NE RL QL G E + E + P +K +D C + LK GAQV+L KNL +GL NG+RGVVV F RLP VRF G+ ++++ E++ V SR+QLPL LAWA+S+H+SQGMSLD + LSR FE GQAYVALSR RSL GL ++ DP +RA V+ FYR LRH+
Sbjct: 92 RRPP--ARLSAEQEAVLAAVRSGKSIFFTGCAGTGKSFLLKKIVGSL-----PPNITYATASTGVAACHVGGTTLHAFAGIGSGKAPLEQCIQLAE-RPGVRQHWLACQHLIIDEISMVDGKFFDKLEAVARAVRKRDEPFGGIQLIICGDFLQLPPVCKANE-EAKFCFQAKSWRKCIHINMELTEVRRQTDKTFVSLLSAIRLGRCTEEVTRQLM-QTAAHRSER---------------DGILATRLCTHKDDVEITNERRLQQLPG-EFLHVFEALDSDPMLVKLIDAQCPVGGRVELKLGAQVMLAKNLDVSQGLVNGARGVVVGFE-------RLPKVRFLCGVTQLIKMEKWLFKGPSGVHLSRQQLPLKLAWAISIHKSQGMSLDCVEISLSRVFESGQAYVALSRARSLAGLRVLD-FDPKVVRADPAVLQFYRQLRHQ 505
BLAST of mRNA_P-lacustris_contig1124.1006.1 vs. uniprot
Match: G1SNR1_RABIT (ATP-dependent DNA helicase PIF1 n=2 Tax=Oryctolagus cuniculus TaxID=9986 RepID=G1SNR1_RABIT) HSP 1 Score: 355 bits (910), Expect = 7.820e-110 Identity = 215/456 (47.15%), Postives = 280/456 (61.40%), Query Frame = 3
Query: 870 PPRELSLSEDQQNAVDLVVGGKSVFFTGCAGTGKSLVLNRILAKLAEAGVPSGAVYPTATTGLAACHVKGTTLQQFAGIGKALGSGEEMLK---VVKKRPGAVRRWKAVQVLIVDEISMLDGDTFDALEFVARSLRGVKAPFGGIRLVLSGDFFQLPPVCRNGAPEKKLCFEASSWKACVQETVELKLVFRQRDDKFVKLLSKIRWGQCTPEVLAELRGRSTAHNNNNNDNGKVGGGPTQGVDDGIEKTQLLTHKADVLRVNEERLAQLDGSEIVSKAENRGNRPDYLKQLDDSCSAPATLRLKAGAQVILVKNLATGRGLANGSRGVVVRFAMSTSSGARLPVVRFASGLEEVMRPEEFPLYVGGAVVASRRQLPLALAWALSVHRSQGMSLDRASVCLSRAFEYGQAYVALSRVRSLEGLSIVGTIDPSKIRAHLRVVTFYRNLRHERHAALQG 2228
PP + LSE+Q + V+ G+SVFFTG AGTGKS +L RIL L P+G V TA+TG+AACH+ GTTL FAGI GSG+ L + +RPG + W + Q L++DEISM++ D FD LE VAR++R PFGGI+L++ GDF QLPPV + P + CF+A SW+ CV T+EL V+RQ D F+ LL +R G+C+ EV +LR + AH KVG DGI T+L TH+ DV NE+RL +L G + E + P+ + LD C L+LK GAQV+LVKNLA RGL NG+RGVVV F + G LP VRF G+ EV+ + + + G V SR+QLPL LAWALS+H+SQGMSLD + L R F GQAYVALSR RSL+GL ++ DP+ +R RV+ FY LR R +L+
Sbjct: 142 PPAKRQLSEEQAAVLGAVLRGQSVFFTGSAGTGKSYLLKRILGSLP----PTGTV-ATASTGVAACHIGGTTLHAFAGI----GSGQAPLAQCVALAQRPGVRQGWLSCQRLVIDEISMVEADLFDKLEAVARAVRQQNKPFGGIQLIICGDFLQLPPVTKGSQPPR-FCFQAKSWRRCVPVTLELTEVWRQTDQTFISLLQAVRLGRCSDEVTRQLRA-TAAH--------KVGR-------DGIVATRLCTHQDDVALTNEKRLQELPGE--IHSFEAMDSDPELAQTLDAQCPVGRLLQLKRGAQVMLVKNLAVSRGLVNGARGVVVGFE---AEGRGLPQVRFLCGVTEVIHVDRWTVNGTGGQVLSRKQLPLQLAWALSIHKSQGMSLDCVEISLGRVFASGQAYVALSRARSLQGLRVLD-FDPAVVRCDPRVLHFYATLRRARGLSLES 565
BLAST of mRNA_P-lacustris_contig1124.1006.1 vs. uniprot
Match: A0A7K8WJ19_9FURN (PIF1 helicase (Fragment) n=4 Tax=Neognathae TaxID=8825 RepID=A0A7K8WJ19_9FURN) HSP 1 Score: 350 bits (899), Expect = 9.100e-110 Identity = 214/446 (47.98%), Postives = 269/446 (60.31%), Query Frame = 3
Query: 864 RGPPRELSLSEDQQNAVDLVVGGKSVFFTGCAGTGKSLVLNRILAKLAEAGVPSGAVYPTATTGLAACHVKGTTLQQFAGIGKALGSGEEMLKVVKKRPGAVRRWKAVQVLIVDEISMLDGDTFDALEFVARSLRGVKAPFGGIRLVLSGDFFQLPPVCRNGAPEKKLCFEASSWKACVQETVELKLVFRQRDDKFVKLLSKIRWGQCTPEVLAELRGRSTAHNNNNNDNGKVGGGPTQGVDDGIEKTQLLTHKADVLRVNEERLAQLDGSEIVSKAENRGNRPDYLKQLDDSCSAPATLRLKAGAQVILVKNLATGRGLANGSRGVVVRFAMSTSSGARLPVVRFASGLEEVMRPEEFPLYVGGAVVASRRQLPLALAWALSVHRSQGMSLDRASVCLSRAFEYGQAYVALSRVRSLEGLSIVGTIDPSKIRAHLRVVTFYRNLR 2201
R PP LS +Q+ + V GKS+FFTGCAGTGKS +L RI+ L P Y TA+TG+AACH+ GTTL FAGIG E+ +++ + RPG + W A Q LI+DEISM+DG FD LE VAR++R PFGGI+L++ GDF QLPPVC+ E K CF+A SW+ C+ +EL V RQ D FV LLS IR G+CT EV +L TA N + D GI T+L THK DV NE RL QL G V +A + + P +K +D C + LK GAQV+L KNL +GL NG+RGVVV F S LP VRF G+ +V++ E++ V SR+QLPL LAWA+S+H+SQGMSLD + LSR FE GQAYVALSR RSL GL ++ DP +RA V+ FYR LR
Sbjct: 23 RRPP--ARLSAEQEAVLGAVRSGKSIFFTGCAGTGKSFLLKRIVGSL-----PPTITYATASTGVAACHIGGTTLHAFAGIGSGKAPLEQCIQLAE-RPGVRQHWLACQHLIIDEISMVDGKFFDKLEAVARAVRKRDEPFGGIQLIICGDFLQLPPVCKANE-ETKFCFQAKSWRKCIHINMELTEVRRQTDKTFVSLLSAIRLGRCTEEVTRQLM--QTATNRSERD--------------GILATRLCTHKDDVEITNERRLQQLSGEVHVFEALD--SDPMLVKLIDAQCPVGGRVELKVGAQVMLAKNLDVSQGLVNGARGVVVGFE---SEQKGLPKVRFLCGVTQVIKTEKWVFKGPSGVHLSRQQLPLKLAWAISIHKSQGMSLDCVEISLSRVFENGQAYVALSRARSLAGLRVLD-FDPKVVRADPSVLQFYRQLR 437 The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig1124.1006.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-lacustris_contig1124.1006.1 >prot_P-lacustris_contig1124.1006.1 ID=prot_P-lacustris_contig1124.1006.1|Name=mRNA_P-lacustris_contig1124.1006.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=725bp MSDGFGVLCGVVVVEERDARGSSVRRSRRTGTLVHATPCGGGAVALELVGback to top mRNA from alignment at P-lacustris_contig1124:251..12033+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-lacustris_contig1124.1006.1 ID=mRNA_P-lacustris_contig1124.1006.1|Name=mRNA_P-lacustris_contig1124.1006.1|organism=Pleurocladia lacustris SAG_25_93|type=mRNA|length=11783bp|location=Sequence derived from alignment at P-lacustris_contig1124:251..12033+ (Pleurocladia lacustris SAG_25_93)back to top Coding sequence (CDS) from alignment at P-lacustris_contig1124:251..12033+ >mRNA_P-lacustris_contig1124.1006.1 ID=mRNA_P-lacustris_contig1124.1006.1|Name=mRNA_P-lacustris_contig1124.1006.1|organism=Pleurocladia lacustris SAG_25_93|type=CDS|length=4350bp|location=Sequence derived from alignment at P-lacustris_contig1124:251..12033+ (Pleurocladia lacustris SAG_25_93)back to top |