mRNA_P-lacustris_contig1122.997.1 (mRNA) Pleurocladia lacustris SAG_25_93

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-lacustris_contig1122.997.1
Unique NamemRNA_P-lacustris_contig1122.997.1
TypemRNA
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Homology
BLAST of mRNA_P-lacustris_contig1122.997.1 vs. uniprot
Match: D7FS23_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS23_ECTSI)

HSP 1 Score: 435 bits (1119), Expect = 9.180e-135
Identity = 253/360 (70.28%), Postives = 271/360 (75.28%), Query Frame = 1
Query:    1 ASGSVLISTGTASKGDSGSITLAXXPAAEGGQSGNVSIGAGG------------------------------AXXXXXXXXVPLDGGRSGDGGALTLVSGNSTXXXXAGGSIIVRPGRGELVSGAVEIQ----------------------GGIYMAVPAGDNATNNVIGFSIRDPQNDNVEYDFRLQQFKHGESRVVSSVPLQVTTIEYSSDGRIKESVVDVDVDDILQRFMEVEMVEYAYTDEWRRARNLEDNSRVRGVIAQQLAEVFPEHVEVVSEFELPDKDFAISDFLQVDKVSLTLDLISAIQSQHKHYSFGPNSRDRSGDITVATEAGGSYANADVTGASGSVLISTGTASKG 924
            ASGSVLISTGTAS GDSGSITLA  P AEGG+SGNVSI  G                               A         P DGG SGDGG L L+SGNST     GGSI+VRPGRG L++G VEIQ                      GGIY+AVPAGD ATNNVIGFSI +P +DNVEYDFRLQQF+ GESRVVSSVPLQVTTIEYSSD RIKES++DVDVDD+LQRFMEVEMVEYAYT+EWR+ARNL +N+RVRGVIAQQLAEVFPEHVEV+ EFELPDKDFAISDFLQVDKVSLTLDLISAIQSQHKHYSFGPNS D+SGDITVATEAGGSYANAD TGASGSVLISTGTAS G
Sbjct: 2155 ASGSVLISTGTASLGDSGSITLATGPGAEGGKSGNVSIQVGRTLEYGPQVQMTELGVRVSAGQQIDPLQPGRAVEISAGSTAPSDGGPSGDGGVLMLLSGNSTGDGGTGGSIVVRPGRGGLLNGTVEIQSSTGTQRIVATENDVNVTSGIDGGIYLAVPAGDIATNNVIGFSIDNPMDDNVEYDFRLQQFEGGESRVVSSVPLQVTTIEYSSDERIKESIIDVDVDDVLQRFMEVEMVEYAYTEEWRQARNLGENARVRGVIAQQLAEVFPEHVEVIPEFELPDKDFAISDFLQVDKVSLTLDLISAIQSQHKHYSFGPNSGDKSGDITVATEAGGSYANADPTGASGSVLISTGTASLG 2514          
BLAST of mRNA_P-lacustris_contig1122.997.1 vs. uniprot
Match: A0A6H5KET3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KET3_9PHAE)

HSP 1 Score: 435 bits (1118), Expect = 1.300e-134
Identity = 255/360 (70.83%), Postives = 272/360 (75.56%), Query Frame = 1
Query:    1 ASGSVLISTGTASKGDSGSITLAXXPAAEGGQSGNVSIGAGG------------------------------AXXXXXXXXVPLDGGRSGDGGALTLVSGNSTXXXXAGGSIIVRPGRGELVSGAVEIQ----------------------GGIYMAVPAGDNATNNVIGFSIRDPQNDNVEYDFRLQQFKHGESRVVSSVPLQVTTIEYSSDGRIKESVVDVDVDDILQRFMEVEMVEYAYTDEWRRARNLEDNSRVRGVIAQQLAEVFPEHVEVVSEFELPDKDFAISDFLQVDKVSLTLDLISAIQSQHKHYSFGPNSRDRSGDITVATEAGGSYANADVTGASGSVLISTGTASKG 924
            ASGSVLISTGTAS GDSGSI   XXPAAEGGQSGNVSI  G                               A         P D G SGDGGAL L+SGNST     GGSI+VRPGRG L++G VEIQ                      GGIY+AVPAGDNATNNVIGFSI +P +DNVEYDFRLQQF+ GESRVVSSVPLQVTTIEYSSD RIKES+VDVDVDD+LQRFMEVEMVEYAYT+EWR+ARNL +N+RVRGVIAQQLAEVFPEHVEV+ EFELPDKDFAISDFLQVDKVSLTLDLISAIQSQHKHYSFGPN+ D+SGDITVATEAGGSYANAD TGASGSVLISTGTAS G
Sbjct: 1962 ASGSVLISTGTASLGDSGSIXXXXXPAAEGGQSGNVSIQVGRTLEDGPQVQMTELGVRVSAGQQIDPLQPGRAVEISAGSTTPFDAGPSGDGGALMLLSGNSTGDGGTGGSIVVRPGRGGLLNGTVEIQSSTGTQRIVTTENDVNVTSGSDGGIYLAVPAGDNATNNVIGFSIDNPMDDNVEYDFRLQQFEGGESRVVSSVPLQVTTIEYSSDERIKESIVDVDVDDVLQRFMEVEMVEYAYTEEWRQARNLGENARVRGVIAQQLAEVFPEHVEVIPEFELPDKDFAISDFLQVDKVSLTLDLISAIQSQHKHYSFGPNTGDKSGDITVATEAGGSYANADPTGASGSVLISTGTASLG 2321          
BLAST of mRNA_P-lacustris_contig1122.997.1 vs. uniprot
Match: A0A7S2KFY9_9STRA (Hypothetical protein (Fragment) n=2 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KFY9_9STRA)

HSP 1 Score: 160 bits (405), Expect = 4.140e-44
Identity = 87/168 (51.79%), Postives = 120/168 (71.43%), Query Frame = 1
Query:  391 YDFRLQQFKHGESRVVSSVPLQVTTIEYSSDGRIKESVVDVDVDDILQRFMEVEMVEYAYTDEWRRARNLEDNSRVRGVIAQQLAEVFPEHVEVVSEFELPDKDFAISDFLQVDKVSLTLDLISAIQSQHKHYSFGPNSRDRSGDITVATEAGGSYANADV-TGASGS 891
            Y FRL+    G++ V+SSVP+QVTT++YSSD RIK+ + +VD DDILQR   ++  EY Y+D WRR R + D+ RVRGVIAQQL EVFPEH ++  ++EL DK+F+ISDF+QVDK  L LDLI A Q+ H+ ++ G +S   S +I+V ++  G Y  A + +G SGS
Sbjct:   26 YAFRLKATSSGQT-VISSVPVQVTTVQYSSDKRIKKDIRNVDTDDILQRLQRIQFAEYGYSDAWRRVRGIPDH-RVRGVIAQQLYEVFPEHTKMFEKYELEDKNFSISDFMQVDKQGLVLDLIGAFQASHRRFNIGASSAISSANISVRSDNAGEYFGAPINSGGSGS 191          
BLAST of mRNA_P-lacustris_contig1122.997.1 vs. uniprot
Match: G4ZCG7_PHYSP (Peptidase S74 domain-containing protein (Fragment) n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4ZCG7_PHYSP)

HSP 1 Score: 159 bits (402), Expect = 6.670e-41
Identity = 103/262 (39.31%), Postives = 151/262 (57.63%), Query Frame = 1
Query:  184 GGALTLVSGNSTXXXXAGGSIIVRPGRGELVSGAVEIQGGIYMAVPAGDNATN----NVIGFSIRDPQNDNVEYDFRLQQFKHGESRV-------------VSSVPLQVTTIEYSSDGRIKESVVDVDVDDILQRFMEVEMVEYAYTDEWRRARNLEDNSRVRGVIAQQLAEVFPEHVEVVSEFELPDKDFAISDFLQVDKVSLTLDLISAIQSQHKHYSFGPNSRDRSGDITVATEAGGSYANADVTGASGSVLISTGTAS 918
            GG + +VSG ++    +GG + ++ G G++V    +     +M+V +GD + +          IR   + N+          HGE++V             +S VP Q+T I Y SD RIK  + DVD DDILQR   +E+ +Y Y++ WR  R + D + VRGVIAQQ+ E FPE+V  VS   LP+K+F++  F +V+K  +T+DLI+AI +QHK +  GPNS  +SG I +AT   GSY NA  TG+SG V I TG++S
Sbjct:   84 GGNIDIVSGAASAPTGSGGHVTLKSGGGDIVVSGTDAAAS-HMSV-SGDGSVSVKADTSSSMEIRGGDSLNISVQTGELTVSHGETKVPGGVIWRLQPDKMISHVPAQITEITYPSDRRIKTDIEDVDEDDILQRIQTLEVKKYRYSEMWREIRGIPDVT-VRGVIAQQVEETFPEYV-TVSTLTLPEKNFSLEQFHEVNKQQITMDLIAAIHAQHKRFKVGPNSEAQSGRIDIATADAGSYVNASPTGSSGDVSIETGSSS 341          
BLAST of mRNA_P-lacustris_contig1122.997.1 vs. uniprot
Match: A0A835YNN8_9STRA (Peptidase S74 domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNN8_9STRA)

HSP 1 Score: 151 bits (382), Expect = 3.950e-40
Identity = 82/164 (50.00%), Postives = 113/164 (68.90%), Query Frame = 1
Query:  430 RVVSSVPLQVTTIEYSSDGRIKESVVDVDVDDILQRFMEVEMVEYAYTDEWRRARNLEDNSRVRGVIAQQLAEVFPEHVEVVSEFELPDKDFAISDFLQVDKVSLTLDLISAIQSQHKHYSFGPNSRDRSGDITVAT-EAGGSYANADVTGASGSVLISTGTAS 918
            R++++VP+QV++I+YSSD RIK  V DVDVDD+LQRF  VEM  Y YT++WR    +  + +VRGVIAQQLA +FPEHV+V+ EFELPDK F + +F QVDK  LT+DLI A+Q+    YS   NS  + G + +A  +A GS ++       GS LI+ G ++
Sbjct:    4 RIITNVPMQVSSIQYSSDQRIKNRVEDVDVDDLLQRFQHVEMKSYHYTEQWRNVNRISGDPQVRGVIAQQLATIFPEHVDVLKEFELPDKGFKLDNFYQVDKDGLTMDLIGAVQAMFDRYSTSANSPIKRGSMHIAAGDATGSESDG------GSALITAGRSA 161          
BLAST of mRNA_P-lacustris_contig1122.997.1 vs. uniprot
Match: W2Q547_PHYPN (Peptidase S74 domain-containing protein n=13 Tax=Phytophthora parasitica TaxID=4792 RepID=W2Q547_PHYPN)

HSP 1 Score: 159 bits (401), Expect = 6.650e-39
Identity = 101/261 (38.70%), Postives = 151/261 (57.85%), Query Frame = 1
Query:  193 LTLVSGNSTXXXXAGGSIIVRPGRGELVSGAVEIQGGIYMAVPAGDN------ATNNVIGFSIRDPQNDNVEYDFRLQQFKHGESRV-------------VSSVPLQVTTIEYSSDGRIKESVVDVDVDDILQRFMEVEMVEYAYTDEWRRARNLEDNSRVRGVIAQQLAEVFPEHVEVVSEFELPDKDFAISDFLQVDKVSLTLDLISAIQSQHKHYSFGPNSRDRSGDITVATEAGGSYANADVTGASGSVLISTGTAS 918
            + + SG ++     GG + ++ G G++V   + +    +M+V +GD       AT + +   IR   N N+  D       HGE+ V             +S VP Q+T + Y SD RIK  + D+D DDILQR   +E+ +Y Y+  WR  R + D + VRGVIAQQ+ E FPE+V  +S   LP+K+F++  F +V+K  +T+DLI+AI +QHK +  GPNS  +SG I +AT  GGSYANA  TG+SG + I +G++S
Sbjct: 3091 IEIASGTASAAAGTGGHLALKSGGGDVVVSGMNVTAS-HMSV-SGDGSIRVKAATTSTM--EIRGGNNMNISVDTGELTVSHGETTVPGGVIWRLQPNKMISHVPAQITEVTYPSDRRIKTDIQDIDEDDILQRIQTLEVKKYRYSKMWREIRGIPDVT-VRGVIAQQVEETFPEYV-TISTLSLPEKNFSLEQFHEVNKQQITMDLIAAIHAQHKRFKVGPNSETQSGRIDIATADGGSYANASPTGSSGDISIESGSSS 3345          
BLAST of mRNA_P-lacustris_contig1122.997.1 vs. uniprot
Match: A0A329SQ29_9STRA (Peptidase S74 domain-containing protein (Fragment) n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329SQ29_9STRA)

HSP 1 Score: 156 bits (395), Expect = 4.110e-38
Identity = 100/260 (38.46%), Postives = 144/260 (55.38%), Query Frame = 1
Query:  184 GGALTLVSGNSTXXXXAGGSIIVRPGRGELVSGAVEIQGGIYMAVPAGDNATN----NVIGFSIRDPQNDNVEYDFRLQQFKHGESRV-------------VSSVPLQVTTIEYSSDGRIKESVVDVDVDDILQRFMEVEMVEYAYTDEWRRARNLEDNSRVRGVIAQQLAEVFPEHVEVVSEFELPDKDFAISDFLQVDKVSLTLDLISAIQSQHKHYSFGPNSRDRSGDITVATEAGGSYANADVTGASGSVLISTGT 912
            GG + + SG ++     GG + ++ G G +V          +M+V +GD +            IR   N N+  D       HGE+ V             +S VP Q+T + Y SD RIK  + D+D DDILQR   +E+ +Y Y++ WR  R + D S VRGVIAQQ+ E FPE+V  +S   LP+K+F++  F +V+K  +T+DLI+AI +QHK +  GPNS  +SG I +AT   GSY NA  TG+SG + I TG+
Sbjct: 3070 GGDIEIASGTASAATGTGGRLALKSGGGNVVISGTNATAS-HMSV-SGDGSIKMKAATTSSMEIRGGNNMNISVDTGELTVSHGETAVPGGVIWRLQPNKMISHVPAQITEVTYPSDRRIKTDIEDIDEDDILQRLQTLEVKKYRYSEMWREIRGIPDVS-VRGVIAQQVEETFPEYV-TISTLTLPEKNFSLEQFHEVNKQQITMDLIAAIHAQHKRFKVGPNSEVQSGRIDIATADAGSYTNASPTGSSGDISIETGS 3325          
BLAST of mRNA_P-lacustris_contig1122.997.1 vs. uniprot
Match: D0MTD8_PHYIT (Peptidase S74 domain-containing protein n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0MTD8_PHYIT)

HSP 1 Score: 149 bits (375), Expect = 1.710e-37
Identity = 100/272 (36.76%), Postives = 148/272 (54.41%), Query Frame = 1
Query:  181 DGGALTLVSGNSTXXXXAGGSIIVRPGR---GELVSGAVEIQGGIYMAVPAGDNATNNVIGFS----------------IRDPQNDNVEYDFRLQQFKHGESRV-------------VSSVPLQVTTIEYSSDGRIKESVVDVDVDDILQRFMEVEMVEYAYTDEWRRARNLEDNSRVRGVIAQQLAEVFPEHVEVVSEFELPDKDFAISDFLQVDKVSLTLDLISAIQSQHKHYSFGPNSRDRSGDITVATEAGGSYANADVTGASGSVLI 900
            +GG +TLVSG  +     GG+  +  G    G+ + G + ++ G    V +G NAT + +  +                IR   N N+  D       HGE+ V             +S VP Q+T + Y SD RIK  + D+D DDILQR   +E+ +Y Y++ WR  R + D + VRGVIAQQ+ E FPE+V  +S   LP+K+F++  F +V+K  +T+DLI+AI +QH+ +  GPNS  +SG I +AT   GSY NA  TG+SG + +
Sbjct:   10 NGGGITLVSGKGSTQ---GGNSEIASGTASAGDGIGGRLALKSGGGDVVVSGTNATASHMSVTSDGSIRVKAAATSSLEIRGGNNMNISVDTGELTVSHGETTVPGGVIWRLQPNKMISHVPAQITEVTYPSDRRIKTDIEDIDEDDILQRLQTLEVKKYRYSEMWREIRGIPDVT-VRGVIAQQVEETFPEYV-TISTLTLPEKNFSLEQFHEVNKQQITMDLIAAIHAQHRRFKVGPNSEAQSGRIDIATADAGSYTNASPTGSSGDISV 276          
BLAST of mRNA_P-lacustris_contig1122.997.1 vs. uniprot
Match: A0A833WMN7_PHYIN (Chaperone of endosialidase n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833WMN7_PHYIN)

HSP 1 Score: 151 bits (381), Expect = 2.800e-36
Identity = 95/257 (36.96%), Postives = 142/257 (55.25%), Query Frame = 1
Query:  184 GGALTLVSGNSTXXXXAGGSIIVRPGRGELVSGAVEIQGGIYMAVPAGDNATNNVIGFS---IRDPQNDNVEYDFRLQQFKHGESRV-------------VSSVPLQVTTIEYSSDGRIKESVVDVDVDDILQRFMEVEMVEYAYTDEWRRARNLEDNSRVRGVIAQQLAEVFPEHVEVVSEFELPDKDFAISDFLQVDKVSLTLDLISAIQSQHKHYSFGPNSRDRSGDITVATEAGGSYANADVTGASGSVLIST 906
            GG + + SG ++     GG + ++ G G++V          +M+V +  +        S   IR   N N+  D       HGE+ V             +S VP Q+T + Y SD RIK  + D+D DDILQR   +E+ +Y Y++ WR  R + D + VRGVIAQQ+ E FPE+V  +S   LP+K+F++  F +V+K  +T+DLI+AI +QH+ +  GPNS  +SG I +AT   GSY NA  TG+SG + + T
Sbjct: 3084 GGNIEIASGTASAGDGIGGRLALKSGGGDVVVSGTNATAS-HMSVTSDGSIRVKAAATSSLEIRGGNNMNISVDTGELTVSHGETTVPGGVIWRLQPNKMISHVPAQITEVTYPSDRRIKTDIEDIDEDDILQRLQTLEVKKYRYSEMWREIRGIPDVT-VRGVIAQQVEETFPEYV-TISTLTLPEKNFSLEQFHEVNKQQITMDLIAAIHAQHRRFKVGPNSEAQSGRIDIATADAGSYTNASPTGSSGDISVET 3337          
BLAST of mRNA_P-lacustris_contig1122.997.1 vs. uniprot
Match: H3GK17_PHYRM (Peptidase S74 domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GK17_PHYRM)

HSP 1 Score: 150 bits (379), Expect = 5.220e-36
Identity = 80/164 (48.78%), Postives = 114/164 (69.51%), Query Frame = 1
Query:  427 SRVVSSVPLQVTTIEYSSDGRIKESVVDVDVDDILQRFMEVEMVEYAYTDEWRRARNLEDNSRVRGVIAQQLAEVFPEHVEVVSEFELPDKDFAISDFLQVDKVSLTLDLISAIQSQHKHYSFGPNSRDRSGDITVATEAGGSYANADVTGASGSVLISTGTAS 918
            ++++S VP Q+T + Y SD RIK  + DVD DDILQR   +E+ +Y Y++ WR  R + D + VRGVIAQQ+ E FPE+V  +S   LP+K+F++  F +V+K  +T+DLI+AI +QHK +  GPNS  +SG I VAT  GGSY NA  +G+SG + I TG++S
Sbjct: 2978 NKMISHVPAQITEVTYPSDRRIKTDIEDVDEDDILQRIQTLEVKKYRYSEMWREIRGIPDVT-VRGVIAQQVGETFPEYV-TISTLTLPEKNFSLEQFHEVNKQQITMDLIAAIHAQHKRFKVGPNSEAQSGRIDVATADGGSYVNASPSGSSGDIAIETGSSS 3139          
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig1122.997.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FS23_ECTSI9.180e-13570.28Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KET3_9PHAE1.300e-13470.83Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2KFY9_9STRA4.140e-4451.79Hypothetical protein (Fragment) n=2 Tax=Leptocylin... [more]
G4ZCG7_PHYSP6.670e-4139.31Peptidase S74 domain-containing protein (Fragment)... [more]
A0A835YNN8_9STRA3.950e-4050.00Peptidase S74 domain-containing protein (Fragment)... [more]
W2Q547_PHYPN6.650e-3938.70Peptidase S74 domain-containing protein n=13 Tax=P... [more]
A0A329SQ29_9STRA4.110e-3838.46Peptidase S74 domain-containing protein (Fragment)... [more]
D0MTD8_PHYIT1.710e-3736.76Peptidase S74 domain-containing protein n=1 Tax=Ph... [more]
A0A833WMN7_PHYIN2.800e-3636.96Chaperone of endosialidase n=1 Tax=Phytophthora in... [more]
H3GK17_PHYRM5.220e-3648.78Peptidase S74 domain-containing protein n=1 Tax=Ph... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig1122contigP-lacustris_contig1122:4848..6329 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score440.3
Seed ortholog evalue9.4e-121
Seed eggNOG ortholog2880.D7FS23
Hectar predicted targeting categoryother localisation
EggNOG OGs2CMRT@1,2QRKV@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons4
Model size1149
Cds size1149
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig1122.997.1prot_P-lacustris_contig1122.997.1Pleurocladia lacustris SAG_25_93polypeptideP-lacustris_contig1122 4848..6329 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815425.2601163-CDS-P-lacustris_contig1122:4847..49641622815425.2601163-CDS-P-lacustris_contig1122:4847..4964Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1122 4848..4964 +
1693493533.8626897-CDS-P-lacustris_contig1122:4847..49641693493533.8626897-CDS-P-lacustris_contig1122:4847..4964Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1122 4848..4964 +
1622815425.2723854-CDS-P-lacustris_contig1122:5054..52331622815425.2723854-CDS-P-lacustris_contig1122:5054..5233Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1122 5055..5233 +
1693493533.8745642-CDS-P-lacustris_contig1122:5054..52331693493533.8745642-CDS-P-lacustris_contig1122:5054..5233Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1122 5055..5233 +
1622815425.2857325-CDS-P-lacustris_contig1122:5300..59771622815425.2857325-CDS-P-lacustris_contig1122:5300..5977Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1122 5301..5977 +
1693493533.8879695-CDS-P-lacustris_contig1122:5300..59771693493533.8879695-CDS-P-lacustris_contig1122:5300..5977Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1122 5301..5977 +
1622815425.2978985-CDS-P-lacustris_contig1122:6153..63291622815425.2978985-CDS-P-lacustris_contig1122:6153..6329Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1122 6154..6329 +
1693493533.9050155-CDS-P-lacustris_contig1122:6153..63291693493533.9050155-CDS-P-lacustris_contig1122:6153..6329Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1122 6154..6329 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-lacustris_contig1122.997.1

>prot_P-lacustris_contig1122.997.1 ID=prot_P-lacustris_contig1122.997.1|Name=mRNA_P-lacustris_contig1122.997.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=383bp
ASGSVLISTGTASKGDSGSITLATGPAAEGGQSGNVSIGAGGAVEISAGS
AVPLDGGRSGDGGALTLVSGNSTGDGGAGGSIIVRPGRGELVSGAVEIQG
GIYMAVPAGDNATNNVIGFSIRDPQNDNVEYDFRLQQFKHGESRVVSSVP
LQVTTIEYSSDGRIKESVVDVDVDDILQRFMEVEMVEYAYTDEWRRARNL
EDNSRVRGVIAQQLAEVFPEHVEVVSEFELPDKDFAISDFLQVDKVSLTL
DLISAIQSQHKHYSFGPNSRDRSGDITVATEAGGSYANADVTGASGSVLI
STGTASKGDSGSITLATGPAAAGANGGALTLVSGNSTGDSGAGGSIIVRP
GRGELVSGAVVIQSSSGTQRIATSDSDVSVTSG
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mRNA from alignment at P-lacustris_contig1122:4848..6329+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-lacustris_contig1122.997.1 ID=mRNA_P-lacustris_contig1122.997.1|Name=mRNA_P-lacustris_contig1122.997.1|organism=Pleurocladia lacustris SAG_25_93|type=mRNA|length=1482bp|location=Sequence derived from alignment at P-lacustris_contig1122:4848..6329+ (Pleurocladia lacustris SAG_25_93)
GCCAGCGGTTCTGTTCTCATCTCGACTGGTACGGCCTCCAAGGGCGACAG CGGGTCCATCACCCTTGCCACTGGGCCGGCTGCAGAAGGGGGCCAGTCTG GCAACGTCAGTATCGGAGTAGGCCGCACTGGTGACGACGGGCCCCAGGTC CATATGTCGGAGTTCGGTGTCCGTGTTTCGGCCGGGCAGCAGACCGACCC CGAAAAGGCTGGAGGCGCCGTCGAGATTTCCGCAGGGTCGGCGGTACCTT TGGATGGGGGACGTTCCGGAGACGGCGGCGCGCTGACACTGGTCTCGGGG AACAGCACAGGAGACGGTGGTGCAGGAGGAAGCATCATCGTGCGGCCTGG GAGAGGCGAGCTCGTGAGCGGGGCCGTTGAGATCCAGTCATCATCGGGAA CCCAGCGCATTGCAACCTCGGACAGTGACGTGAGCGTGACCAGCGGAAGC GAGGGGAGGGATCTACATGGCCGTACCAGCGGGCGACAACGCCACGAACA ACGTCATCGGATTCAGCATTCGCGACCCACAAAACGACAATGTTGAGTAC GATTTCCGGCTGCAGCAGTTCAAACACGGCGAGTCGCGCGTGGTGTCCAG CGTCCCGCTTCAAGTCACCACGATCGAGTACTCGTCTGATGGACGGATAA AGGAAAGCGTCGTGGACGTGGATGTCGACGACATCCTGCAGCGCTTCATG GAAGTGGAGATGGTGGAGTACGCCTACACGGACGAGTGGCGCCGAGCTCG CAACCTGGAAGACAACTCTCGCGTCCGGGGTGTGATCGCTCAGCAGCTGG CCGAGGTCTTTCCGGAGCACGTGGAGGTGGTCTCCGAGTTCGAGCTACCC GACAAGGACTTTGCGATCAGCGACTTCCTCCAGGTGGACAAGGTCTCACT CACGCTTGACCTCATATCGGCCATACAGTCACAGCACAAGCACTACAGCT TCGGACCCAACTCCCGCGACAGGAGCGGCGACATCACGGTGGCCACCGAG GCCGGTGGATCGTATGCGAATGCCGACGTGACGGGCGCCAGCGGTTCTGT TCTCATCTCGACTGGTACGGCCTCGAAGGGCGACAGCGGGTCCATCACCC TTGCCACTGGGCCGGCCGCGGCAGGGGCCAGTCTGGAAACGTCAGTATCG GAGTAGGCCGCACTGGTGACGACGGGCCCCAGGTCCATATGTCGGAGTTC GGTGTCCGTGTTTCGGCCGGGCAGCAGACCGACCCCGAAAAGGCTGGAGG CGCCGTCGAGATTTCCGCAGGGTCGGCGGTAGCTTTGGATGGGGGACGTT CCGGAGACGGCGGCGCGCTGACACTGGTCTCGGGGAACAGCACAGGAGAC AGTGGTGCAGGAGGAAGCATCATCGTGCGGCCTGGGAGAGGCGAACTGGT GAGCGGGGCCGTTGTGATCCAGTCATCATCGGGAACCCAGCGCATAGCAA CGTCGGACAGTGACGTGAGCGTGACCAGCGGA
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Coding sequence (CDS) from alignment at P-lacustris_contig1122:4848..6329+

>mRNA_P-lacustris_contig1122.997.1 ID=mRNA_P-lacustris_contig1122.997.1|Name=mRNA_P-lacustris_contig1122.997.1|organism=Pleurocladia lacustris SAG_25_93|type=CDS|length=2298bp|location=Sequence derived from alignment at P-lacustris_contig1122:4848..6329+ (Pleurocladia lacustris SAG_25_93)
GCCAGCGGTTCTGTTCTCATCTCGACTGGTACGGCCTCCAAGGGCGACAG
CGGGTCCATCACCCTTGCCACTGGGCCGGCTGCAGAAGGGGGCCAGTCTG
GCAACGTCAGTATCGGAGCCAGCGGTTCTGTTCTCATCTCGACTGGTACG
GCCTCCAAGGGCGACAGCGGGTCCATCACCCTTGCCACTGGGCCGGCTGC
AGAAGGGGGCCAGTCTGGCAACGTCAGTATCGGAGCTGGAGGCGCCGTCG
AGATTTCCGCAGGGTCGGCGGTACCTTTGGATGGGGGACGTTCCGGAGAC
GGCGGCGCGCTGACACTGGTCTCGGGGAACAGCACAGGAGACGGTGGTGC
AGGAGGAAGCATCATCGTGCGGCCTGGGAGAGGCGAGCTCGTGAGCGGGG
CCGTTGAGATCCAGCTGGAGGCGCCGTCGAGATTTCCGCAGGGTCGGCGG
TACCTTTGGATGGGGGACGTTCCGGAGACGGCGGCGCGCTGACACTGGTC
TCGGGGAACAGCACAGGAGACGGTGGTGCAGGAGGAAGCATCATCGTGCG
GCCTGGGAGAGGCGAGCTCGTGAGCGGGGCCGTTGAGATCCAGGGAGGGA
TCTACATGGCCGTACCAGCGGGCGACAACGCCACGAACAACGTCATCGGA
TTCAGCATTCGCGACCCACAAAACGACAATGTTGAGTACGATTTCCGGCT
GCAGCAGTTCAAACACGGCGAGTCGCGCGTGGTGTCCAGCGTCCCGCTTC
AAGTCACCACGATCGAGTACTCGTCTGATGGACGGATAAAGGAAAGCGTC
GTGGACGTGGATGTCGACGACATCCTGCAGCGCTTCATGGAAGTGGAGAT
GGTGGAGTACGCCTACACGGACGAGTGGCGCCGAGCTCGCAACCTGGAAG
ACAACTCTCGCGTCCGGGGTGTGATCGCTCAGCAGCTGGCCGAGGTCTTT
CCGGAGCACGTGGAGGTGGTCTCCGAGTTCGAGCTACCCGACAAGGACTT
TGCGATCAGCGACTTCCTCCAGGTGGACAAGGTCTCACTCACGCTTGACC
TCATATCGGCCATACAGTCACAGCACAAGCACTACAGCTTCGGACCCAAC
TCCCGCGACAGGAGCGGCGACATCACGGTGGCCACCGAGGCCGGTGGATC
GTATGCGAATGCCGACGTGACGGGCGCCAGCGGTTCTGTTCTCATCTCGA
CTGGTACGGCCTCGAAGGGCGACAGCGGGTCCATCACCCTTGCCACTGGG
CCGGCCGCGGCAGGGGCCAGGGAGGGATCTACATGGCCGTACCAGCGGGC
GACAACGCCACGAACAACGTCATCGGATTCAGCATTCGCGACCCACAAAA
CGACAATGTTGAGTACGATTTCCGGCTGCAGCAGTTCAAACACGGCGAGT
CGCGCGTGGTGTCCAGCGTCCCGCTTCAAGTCACCACGATCGAGTACTCG
TCTGATGGACGGATAAAGGAAAGCGTCGTGGACGTGGATGTCGACGACAT
CCTGCAGCGCTTCATGGAAGTGGAGATGGTGGAGTACGCCTACACGGACG
AGTGGCGCCGAGCTCGCAACCTGGAAGACAACTCTCGCGTCCGGGGTGTG
ATCGCTCAGCAGCTGGCCGAGGTCTTTCCGGAGCACGTGGAGGTGGTCTC
CGAGTTCGAGCTACCCGACAAGGACTTTGCGATCAGCGACTTCCTCCAGG
TGGACAAGGTCTCACTCACGCTTGACCTCATATCGGCCATACAGTCACAG
CACAAGCACTACAGCTTCGGACCCAACTCCCGCGACAGGAGCGGCGACAT
CACGGTGGCCACCGAGGCCGGTGGATCGTATGCGAATGCCGACGTGACGG
GCGCCAGCGGTTCTGTTCTCATCTCGACTGGTACGGCCTCGAAGGGCGAC
AGCGGGTCCATCACCCTTGCCACTGGGCCGGCCGCGGCAGGGGCCAACGG
CGGCGCGCTGACACTGGTCTCGGGGAACAGCACAGGAGACAGTGGTGCAG
GAGGAAGCATCATCGTGCGGCCTGGGAGAGGCGAACTGGTGAGCGGGGCC
GTTGTGATCCAGTCATCATCGGGAACCCAGCGCATAGCAACGTCGGACAG
TGACGTGAGCGTGACCAGCGGAACGGCGGCGCGCTGACACTGGTCTCGGG
GAACAGCACAGGAGACAGTGGTGCAGGAGGAAGCATCATCGTGCGGCCTG
GGAGAGGCGAACTGGTGAGCGGGGCCGTTGTGATCCAGTCATCATCGGGA
ACCCAGCGCATAGCAACGTCGGACAGTGACGTGAGCGTGACCAGCGGA
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