mRNA_P-lacustris_contig111.907.1 (mRNA) Pleurocladia lacustris SAG_25_93
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Overview
Homology
BLAST of mRNA_P-lacustris_contig111.907.1 vs. uniprot
Match: D7FYV5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYV5_ECTSI) HSP 1 Score: 226 bits (575), Expect = 1.420e-72 Identity = 100/116 (86.21%), Postives = 106/116 (91.38%), Query Frame = 3
Query: 3 EDDSVTWDEEMIYGCVCDSAWDVGLGAGQTQEPEWFGPDCSLRHCPSGDDPNTDVDETDCSGVASSSVYSGTVGRSGNLCQVDCSNRGTCDYETGLCECYTGYYGHNCGLQSVLAK 350
EDD+VTWDEEMI+GCVCDS W+VGLGAGQTQEPEWFGPDCSLRHCPSGDDP+TDVDETDC V SSSVY GT GR+GNLC VDCSNRGTCDY TGLCEC+TGYYG NCG QSVLAK
Sbjct: 154 EDDTVTWDEEMIFGCVCDSKWEVGLGAGQTQEPEWFGPDCSLRHCPSGDDPSTDVDETDCFNVTSSSVYLGTAGRAGNLCHVDCSNRGTCDYATGLCECFTGYYGFNCGQQSVLAK 269
BLAST of mRNA_P-lacustris_contig111.907.1 vs. uniprot
Match: A0A7S2H126_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2H126_9STRA) HSP 1 Score: 171 bits (432), Expect = 9.670e-52 Identity = 75/120 (62.50%), Postives = 94/120 (78.33%), Query Frame = 3
Query: 3 EDDSVTWDEEMIYGCVCDSAWDVGLGAGQTQEPEWFGPDCSLRHCPSGDDPNTDVDETDCSGVASSSV---YSGTVGR--SGNLCQVDCSNRGTCDYETGLCECYTGYYGHNCGLQSVLA 347
++ + TWDE+M+YGC+CDS+W+VGLGAGQ ++ EWFG DCS+RHCPSGDDP T VDETDC+ V +++ Y G G +GNLC VDCSNRG CDY +GLC C+TG+YG NCG SVLA
Sbjct: 84 DETTTTWDEDMLYGCLCDSSWEVGLGAGQRRDAEWFGYDCSMRHCPSGDDPVTSVDETDCNDVGTNATRPNYYGEFGNGTTGNLCHVDCSNRGLCDYASGLCHCFTGHYGENCGSMSVLA 203
BLAST of mRNA_P-lacustris_contig111.907.1 vs. uniprot
Match: A0A7S2S8K4_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2S8K4_9STRA) HSP 1 Score: 162 bits (411), Expect = 6.900e-50 Identity = 70/106 (66.04%), Postives = 80/106 (75.47%), Query Frame = 3
Query: 33 MIYGCVCDSAWDVGLGAGQTQEPEWFGPDCSLRHCPSGDDPNTDVDETDCSGVASSSVYSGTVGRSGNLCQVDCSNRGTCDYETGLCECYTGYYGHNCGLQSVLAK 350
M+YGCVCDS+W VGLGAG QEPEWFG DCSLRHCPSGDDP T +DETDC G + + G +GN C VDCSNRG CDY TG C+C+ G+YG C LQSVLA+
Sbjct: 1 MVYGCVCDSSWSVGLGAGNRQEPEWFGADCSLRHCPSGDDPRTSLDETDCGGKMAKGGFG--TGETGNFCHVDCSNRGICDYNTGRCQCFDGHYGEACNLQSVLAQ 104
BLAST of mRNA_P-lacustris_contig111.907.1 vs. uniprot
Match: A0A7S4TA77_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4TA77_9STRA) HSP 1 Score: 162 bits (411), Expect = 1.070e-49 Identity = 74/114 (64.91%), Postives = 83/114 (72.81%), Query Frame = 3
Query: 12 SVTWDEEMIYGCVCDSAWDVGLGAGQTQEPEWFGPDCSLRHCPSGDDPNT-DVDETDCSGVASSSVYSGTVGRSGNLCQVDCSNRGTCDYETGLCECYTGYYGHNCGLQSVLAK 350
++TWD EMIYGCVCDS+W VGLG G+ QEPEWFG DCSLRHCPS DDP T VDETDCS + G+ GN+C +DCSNRG CDY TG C C+ GYYG C LQS LAK
Sbjct: 7 TITWDSEMIYGCVCDSSWAVGLGNGERQEPEWFGADCSLRHCPSADDPRTTSVDETDCSNKDAKGGRG--TGQPGNICHIDCSNRGLCDYVTGRCTCFDGYYGEACHLQSALAK 118
BLAST of mRNA_P-lacustris_contig111.907.1 vs. uniprot
Match: A0A8J2X5G2_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2X5G2_9STRA) HSP 1 Score: 167 bits (423), Expect = 1.190e-49 Identity = 76/111 (68.47%), Postives = 87/111 (78.38%), Query Frame = 3
Query: 21 WDEEMIYGCVCDSAWDVGLGAGQTQEPEWFGPDCSLRHCPSGDDP-NTDVDETDCSGVASSSVYSGTVGRSGNLCQVDCSNRGTCDYETGLCECYTGYYGHNCGLQSVLAK 350
WD++ IYGCVCDS+W VGLG GQ QEPEWFGP CSLRHCPSGDDP T VDET+C+GV ++ Y VG GNLCQVDC+NRG CD ETG C C+TG YGH+C L S LA+
Sbjct: 153 WDQDRIYGCVCDSSWPVGLGPGQRQEPEWFGPWCSLRHCPSGDDPYTTHVDETNCTGVTAAGGYG--VGEKGNLCQVDCANRGKCDTETGECSCWTGSYGHDCTLLSALAR 261
BLAST of mRNA_P-lacustris_contig111.907.1 vs. uniprot
Match: A0A7S1CQ07_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CQ07_9STRA) HSP 1 Score: 155 bits (392), Expect = 1.020e-44 Identity = 71/112 (63.39%), Postives = 84/112 (75.00%), Query Frame = 3
Query: 18 TWDEEMIYGCVCDSAWDVGLGAGQTQEPEWFGPDCSLRHCPSGDDPNTDVDETDCSG-VASSSVYSG-TVGRSGNLCQVDCSNRGTCDYETGLCECYTGYYGHNCGLQSVLA 347
TWDE+ I+GCVCDS+W V L +G TQEPEWFG DCSLRHC SGDDP T DETDC G V + +G T G +GNLC VDC+NRG C+Y TG+C+C+ G+YG C LQS LA
Sbjct: 167 TWDEDKIFGCVCDSSWTVSLASGATQEPEWFGADCSLRHCASGDDPMTTADETDCVGKVRNGQTVAGRTGGVAGNLCHVDCANRGICNYNTGICDCFDGFYGVACTLQSELA 278
BLAST of mRNA_P-lacustris_contig111.907.1 vs. uniprot
Match: A0A2D4CFV3_PYTIN (EGF-like domain-containing protein n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CFV3_PYTIN) HSP 1 Score: 154 bits (390), Expect = 1.880e-44 Identity = 69/109 (63.30%), Postives = 80/109 (73.39%), Query Frame = 3
Query: 18 TWDEEMIYGCVCDSAWDVGLGAGQTQEPEWFGPDCSLRHCPSGDDPNTDVDETDCSGVASSSVYSGTVGRSGNLCQVDCSNRGTCDYETGLCECYTGYYGHNCGLQSVL 344
TWD++ ++GCVCDS W VGLG GQ Q EWFGPDCSL CPSGDDP T VDETDCSG +S VG++GN C VDCSNRG CDY TGLC+C+ G+YG NC S +
Sbjct: 173 TWDQDRMFGCVCDSTWAVGLGTGQRQLAEWFGPDCSLMRCPSGDDPLTAVDETDCSGKQASGGIG--VGQTGNKCHVDCSNRGKCDYSTGLCQCFDGFYGANCASLSPV 279
BLAST of mRNA_P-lacustris_contig111.907.1 vs. uniprot
Match: A0A836CHV5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHV5_9STRA) HSP 1 Score: 152 bits (384), Expect = 1.100e-43 Identity = 62/106 (58.49%), Postives = 79/106 (74.53%), Query Frame = 3
Query: 12 SVTWDEEMIYGCVCDSAWDVGLGAGQTQEPEWFGPDCSLRHCPSGDDPNTDVDETDCSGVASSSVYSGTVGRSGNLCQVDCSNRGTCDYETGLCECYTGYYGHNCG 329
+ WD + ++ C+CDS+W VG+GAG+TQ EWFGP C+ R CPSGDDP T DETDC+G + V + G +GNLC VDCSNRGTC+Y TG+C+CY G+ GHNCG
Sbjct: 156 AAAWDADKLWACLCDSSWPVGIGAGETQASEWFGPACTQRRCPSGDDPMTSADETDCTGKTTPYVAATATGEAGNLCHVDCSNRGTCNYGTGVCKCYPGFSGHNCG 261
BLAST of mRNA_P-lacustris_contig111.907.1 vs. uniprot
Match: A0A067CMU3_SAPPC (EGF-like domain-containing protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067CMU3_SAPPC) HSP 1 Score: 152 bits (383), Expect = 1.400e-43 Identity = 66/110 (60.00%), Postives = 85/110 (77.27%), Query Frame = 3
Query: 12 SVTWDEEMIYGCVCDSAWDVGLGAGQTQEPEWFGPDCSLRHCPSGDDPNTDVDETDCSGVASSSVYSGTVGRSGNLCQVDCSNRGTCDYETGLCECYTGYYGHNCGLQSV 341
+ TWD+E I+GCVCDSAW VGL +GQTQEPEWFG DCSLRHCPS +DP + V +TDC+GVA++ S +VG GNLC ++CSNRG C+Y+ G C C+ G+ G +C +Q V
Sbjct: 156 TTTWDQERIFGCVCDSAWPVGLASGQTQEPEWFGADCSLRHCPSNNDPLSGVTDTDCAGVAAAG--SASVGALGNLCHIECSNRGICNYKDGSCACFEGFLGVDCSVQVV 263
BLAST of mRNA_P-lacustris_contig111.907.1 vs. uniprot
Match: A0A8K1CPX8_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CPX8_PYTOL) HSP 1 Score: 151 bits (381), Expect = 1.500e-43 Identity = 65/113 (57.52%), Postives = 84/113 (74.34%), Query Frame = 3
Query: 6 DDSVTWDEEMIYGCVCDSAWDVGLGAGQTQEPEWFGPDCSLRHCPSGDDPNTDVDETDCSGVASSSVYSGTVGRSGNLCQVDCSNRGTCDYETGLCECYTGYYGHNCGLQSVL 344
+D+ TWD+ I+GC+CDS+W VGLG+GQ Q+ EWFGPDCSL CP+GDDP T VDETDC+G ++ S VG+ GN C VDC+NRG CDY +G C C++G+YG NC S +
Sbjct: 129 EDTTTWDQNRIFGCLCDSSWAVGLGSGQRQQSEWFGPDCSLLRCPTGDDPLTAVDETDCNGKTATDSTS--VGQPGNRCHVDCANRGICDYTSGTCMCFSGFYGSNCASLSPV 239 The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig111.907.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-lacustris_contig111.907.1 >prot_P-lacustris_contig111.907.1 ID=prot_P-lacustris_contig111.907.1|Name=mRNA_P-lacustris_contig111.907.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=107bp MIYGCVCDSAWDVGLGAGQTQEPEWFGPDCSLRHCPSGDDPNTDVDETDCback to top mRNA from alignment at P-lacustris_contig111:99536..100059+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-lacustris_contig111.907.1 ID=mRNA_P-lacustris_contig111.907.1|Name=mRNA_P-lacustris_contig111.907.1|organism=Pleurocladia lacustris SAG_25_93|type=mRNA|length=524bp|location=Sequence derived from alignment at P-lacustris_contig111:99536..100059+ (Pleurocladia lacustris SAG_25_93)back to top Coding sequence (CDS) from alignment at P-lacustris_contig111:99536..100059+ >mRNA_P-lacustris_contig111.907.1 ID=mRNA_P-lacustris_contig111.907.1|Name=mRNA_P-lacustris_contig111.907.1|organism=Pleurocladia lacustris SAG_25_93|type=CDS|length=642bp|location=Sequence derived from alignment at P-lacustris_contig111:99536..100059+ (Pleurocladia lacustris SAG_25_93)back to top |