mRNA_P-lacustris_contig111.902.1 (mRNA) Pleurocladia lacustris SAG_25_93
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Overview
Homology
BLAST of mRNA_P-lacustris_contig111.902.1 vs. uniprot
Match: A0A6H5KQ82_9PHAE (4HBT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQ82_9PHAE) HSP 1 Score: 592 bits (1526), Expect = 3.560e-211 Identity = 301/366 (82.24%), Postives = 319/366 (87.16%), Query Frame = 1
Query: 46 MRVAKGVSESLRSPVGREMLEFFTSRVWQMGFARSLGLYDGMLVTSVGQQGSMLEAVYTIPENICVTGGTFGAGGRAFLPCGVTTALFDEVSTLAMVIADRTYRPGVSISLSCNMFHPVAPGERVTFKSRGLKMGARLGYGEASMYREDGKLAARGRHVKHLTMGRAWDFSAHPFVFPYARKWTERQHEQWLRDPERTKGIASGEHLLDMFKLEGFASYGGEGHEAYFGAGASNGSATQELPGEDEREIRSAEAECLVTRRMCNYMPGTMHGGAIAVAAEEIARRCLQAPLPLDAVPIPGDPRVQSMEVHYMSPIKRRAGLAAMSAAAGTGRNVTSVGLSEAGGTEGGVLCAEAVLLWGQGNEGAG 1143
MR+AKGVSE+LRSPV R MLE+FT VWQ+GFARSLG+YDGMLVTSVGQQGSMLEAVYTIPENICVTGGT G GG LPCGVTTALFDEVSTLAM+IADRT RPGVSISLSC+MFHPVAPGERVTFKSRGLKMGARLGYGEASMYREDGKLAARGRHVKHL MGRAWD S PFVFPYARK +ERQH QWLRDPER+KGI +GEHLLDMFKLE F GG G E YFG S+G +E GE E RSAEAECLVTRRMCNYMPGTMHGGAIAVAAEEI+RRC AP P+DAVPIPG+PRVQ MEVHYMSPIKRRAGLAA+SAA+G G+NVT VGLSEAGGTEGGVL AEAVLLW Q EG G
Sbjct: 1 MRIAKGVSEALRSPVRRGMLEYFTEHVWQVGFARSLGVYDGMLVTSVGQQGSMLEAVYTIPENICVTGGTLGGGGGCVLPCGVTTALFDEVSTLAMMIADRTCRPGVSISLSCHMFHPVAPGERVTFKSRGLKMGARLGYGEASMYREDGKLAARGRHVKHLPMGRAWDLSTIPFVFPYARKLSERQHAQWLRDPERSKGIPTGEHLLDMFKLEQFERVGGGGDEEYFGGATSSGPQVEEQAGEVEGGFRSAEAECLVTRRMCNYMPGTMHGGAIAVAAEEISRRCPPAPFPMDAVPIPGNPRVQYMEVHYMSPIKRRAGLAAVSAASGIGKNVTRVGLSEAGGTEGGVLSAEAVLLWSQRGEGRG 366
BLAST of mRNA_P-lacustris_contig111.902.1 vs. uniprot
Match: D7FYV9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYV9_ECTSI) HSP 1 Score: 400 bits (1027), Expect = 4.640e-137 Identity = 204/252 (80.95%), Postives = 216/252 (85.71%), Query Frame = 1
Query: 388 MFHPVAPGERVTFKSRGLKMGARLGYGEASMYREDGKLAARGRHVKHLTMGRAWDFSAHPFVFPYARKWTERQHEQWLRDPERTKGIASGEHLLDMFKLEGFASYGGEGHEAYFGAGASNGSATQELPGEDEREIRSAEAECLVTRRMCNYMPGTMHGGAIAVAAEEIARRCLQAPLPLDAVPIPGDPRVQSMEVHYMSPIKRRAGLAAMSAAAGTGRNVTSVGLSEAGGTEGGVLCAEAVLLWGQGNEGAG 1143
MFHPVAPGERVTFKSRGLKMGARLGYGEASMYREDGKLAARGRHVKHL MGRAWD S +PFVFPYARK +ERQH QWLRDPER+KGI +GEHLLDMFKLE F GG G EAYFG S+ +E G+DE RSAEAECLVTRRMCNYMPGTMHGGAIAVAAEEIARRC AP P+DAVPIPG+PRVQ MEVHYMSPIKRRAGLAA+SAA+ G+NVT VGLSEAGGTEGGVL AEAVLLW Q EG G
Sbjct: 1 MFHPVAPGERVTFKSRGLKMGARLGYGEASMYREDGKLAARGRHVKHLPMGRAWDLSTNPFVFPYARKMSERQHAQWLRDPERSKGIPTGEHLLDMFKLEQFERVGGGGDEAYFGVATSSDPQVEEQAGDDEGGFRSAEAECLVTRRMCNYMPGTMHGGAIAVAAEEIARRCPPAPFPMDAVPIPGNPRVQYMEVHYMSPIKRRAGLAAVSAASEIGKNVTRVGLSEAGGTEGGVLSAEAVLLWSQRGEGRG 252
BLAST of mRNA_P-lacustris_contig111.902.1 vs. uniprot
Match: A0A7S3H750_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H750_9STRA) HSP 1 Score: 108 bits (270), Expect = 8.490e-23 Identity = 93/290 (32.07%), Postives = 131/290 (45.17%), Query Frame = 1
Query: 217 YTIPENICVTGGTFGAGGRAFLPCGVTTALFDEVSTLAMVIADRTYRPGVSISLSCNMFHPVAPGERVTFKSRGLKMGARLGYGEASMYREDGKLAARGRHVKHLTMGRAWDFSAHPFVFPYARKWTERQHEQWLRDPERTKG--IASGEHL----LDMFKLEGFASYGGEGHEAYFGAGASNGSATQELPGEDEREIRSAEAECL-------------------VTRRMCNYMPGTMHGGAIAVAAEEI-----ARRCLQ-APLPLDAVPIPGDPRVQSMEVHYMSPIK 993
Y +PEN+C G G A G A FDE+ST A ++ D+T+RPG+S+ LS + V G+ VTF + K+G LG+ M G+L ARG+H+++L MG ++D P+ P+A K+ E + + D T G GEH+ L +L+G G E Q LP +RSAE L V +CN + G+MHGGA+A A E+ AR Q L A D V S+EV Y+S +K
Sbjct: 46 YIVPENLCRKHHRAGKDGEAQFSSGAIMAAFDEISTYATIMQDKTHRPGLSLHLSTEIIKNVNAGDEVTFLTHADKLGKTLGFCSMEMLNSKGELVARGKHIRYLQMGFSFDLITKPWALPWALKFYETFYGK-KTDAMATTGETAGKGEHIFRKPLHFPELDGL----GRVFELLGLTKVDPTETAQALPA-----VRSAEDSLLYCSEDGRADPAQVAVYGLTVRPIVCNML-GSMHGGAVACAVEQACLLSRARNTNQKGELSGPAGVYETDCFVSSVEVRYISAMK 324
BLAST of mRNA_P-lacustris_contig111.902.1 vs. uniprot
Match: A0A4D9CYT7_9STRA (4HBT domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CYT7_9STRA) HSP 1 Score: 105 bits (262), Expect = 5.890e-22 Identity = 99/366 (27.05%), Postives = 158/366 (43.17%), Query Frame = 1
Query: 46 MRVAKGVSESLRSPVGREMLEFFTSRVWQMGFARSLGLYDGMLVTSVGQQGSMLEAVYTIPENICVTGGTFGAGGRAFLPCGVTTALFDEVSTLAMVIADRTYRPGVSISLSCNMFHPVAPGERVTFKSRGLKMGARLGYGEASMY-REDGKLAARGRHVKHLTMGRA--WDFSAHPFVFPYARKWTERQHEQWLRDPERTKGIASGEHLLDMFKLEGFASYGGEGHEAYFGAGASNGSATQELPGEDEREIRSAEAECLVTRRMCNYMPGTMHGGAIAVAAEEIARRCLQAPLPLDAVPIPGDPRVQSMEVHYMSPIKRRAGLAAMSAAAGTGRNVTSVG-----LSEAGGTEGGVLCAEAVLLW 1119
MR + +L+ E FT + FA +L + D +L ++G LE + I + +C T G +L GV TA+FDE+ST A ++ DRT+RPGVS++L + V PG + K+ K+G L + + +L A G+H K+L M W+ + P ++P RK + + ER + D F L+ G E + G++ + +++ A V R CN + MHGGA+AVAAEEIA + A P R +++ +HY+ R LAA + ++ G L++ GG LC ++W
Sbjct: 1 MRARPSLIAALKQSSRHEDALEFTQLFHSINFAHTLQVSDAVLERYDAKKG--LETTHEITKYLCRTD-----EGGTYLSAGVITAVFDEISTAACILQDRTHRPGVSVALDVEVMANVTPGRTLRLKTWADKIGKSLAFLRLDLRDAASDQLVAVGKHCKYLPMAGVPFWNMAFTPLLYPIVRKSLLGLTRRHVATGERVN-TQDASSIFDHFPLDNLTP-GNESDK-----------------GDERQRLQATRASLHVKPRHCNGL-FKMHGGALAVAAEEIALLDVAARKKESTSQAP---RARALSLHYLQANDRVVDLAAWTLQDACEKSGGEEGEDDGLLTQIEVRRGGTLCNSGSIIW 336
BLAST of mRNA_P-lacustris_contig111.902.1 vs. uniprot
Match: A0A836CMK8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMK8_9STRA) HSP 1 Score: 99.0 bits (245), Expect = 3.270e-19 Identity = 91/280 (32.50%), Postives = 128/280 (45.71%), Query Frame = 1
Query: 349 TYRPGVSISLSCNMFHPVAPGERVTFKSRGLKMGARLGYGEASMYRED-GKLAARGRHVKHLTMGRAWDF-SAHPFVFPYARKWTERQHEQWLRDP--------------ERTKGIASGEHLLDM-----FKLEGFASYGGEGHEAYFGAGASNGSATQELPGEDEREIRSAEAECLVTRRMCNYMPGTMHGGAIAVAAEEIARRCLQAPLPLDAVPIPGDPRVQSMEVHYMSPIKRRAGLAAMSAAAGTGRNVTSVGLSEAGGTEGGVLCAEAVLLWGQ 1125
T+RPG++++L+ MF PG+++ +SR K G LGY E E G L ARGRHVK+L MGR WD P + P A ER + + +P KG+ GE L+ +L+ GGE GAS GSA Q AE ++T ++ N+M G+ HGGAI AAE++A AP +D P +Q ME Y + K+RA L A G + G S+ GG+ A + + WG+
Sbjct: 154 THRPGLTVTLTTEMFRKARPGDKLRLESRLTKGGKALGYLEMVAINEACGSLVARGRHVKYLPMGRQWDLVMGSPLLAPLALAMHERDMTRRMANPMWMKXXXXXXXXXXXXXKGVPEGETLVQQVAPLNLQLDTTLEAGGE-------HGAS-GSAQQR-----------GSAEIIITPQLFNFM-GSFHGGAICAAAEQMA--AATAPAEVDGKPT----WIQHMETQYFTAQKKRAALTGEYRAGGL-----AAGCSDVTFLSGGLKMAGSRMQWGE 402
BLAST of mRNA_P-lacustris_contig111.902.1 vs. uniprot
Match: A0A482STT1_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482STT1_9ARCH) HSP 1 Score: 88.2 bits (217), Expect = 6.720e-16 Identity = 68/267 (25.47%), Postives = 110/267 (41.20%), Query Frame = 1
Query: 217 YTIPENICVTGGTFGAGGRAFLPCGVTTALFDEVSTLAMVIADRTYRPGVSISLSCNMFHPVAPGERVTFKSRGLKMGARLGYGEASMYREDGKLAARGRHVKHLTMGRAWDFSAHPFVFPYAR--------KWTERQHEQWLRDPERTKGIASGEHLLDMFKLEGFASYGGEGHEAYFGAGASNGSATQELPGEDEREIRSAEAECLVTRRMCNYMPGTMHGGAIAVAAEEIARRCLQAPLPLDAVPIPGDPRVQSMEVHYMSPIK 993
Y +P ++C + + ALFDE+ST A+++ D+ YR GVS+ L+ + P + E V + K+G LG+ M ++G L A+G+H+K L MG WD +HP + P A K + ++ L P + + + +F SA P + + + + V M N + G MHGGA A EE L + + V+ MEV Y+SP++
Sbjct: 45 YKVPPSLCRI-----QKSKPVISNAAVLALFDELSTDALIVTDKNYRGGVSVHLTTELIKPASLNEDVVIHTTADKIGKVLGFCSMEMRSKEGTLLAKGKHIKFLPMGWLWDLVSHPAILPIALYFYQLFRGKKFKTDVDEILFKPRVVEDNKDEKEIASVF------------------------SALSLEPSSSDNNEKDSYYKVRVKSFMKNRL-GAMHGGAAAAVIEEACEVYLNTYRAAEQQNVEKKLYVEKMEVRYLSPMR 281
BLAST of mRNA_P-lacustris_contig111.902.1 vs. uniprot
Match: A0A7S2UIG7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UIG7_9STRA) HSP 1 Score: 59.3 bits (142), Expect = 3.450e-6 Identity = 57/194 (29.38%), Postives = 86/194 (44.33%), Query Frame = 1
Query: 115 TSRVWQMGFARSLG------LYDGMLVTSVGQQGSMLEAVYTIPENICVTGGTFGAGGRAFLPCGVTTALFDEVSTLAMVIADRTYRPGVSISLSCNMF-----------HPVAPGERVTFKSRGLKMGARLGYGEASMYR-EDGKLAARGRHVKHLTMGRAWDFSAHPFVFPYARKWTER----QHEQWLRDP 630
+S++ GF R+LG L+ + S L YTIP + GG G FL A+FDEV+T A+V DR RPG+SI+LS + + G+ V ++ +K G L + EA G + GRH K+L M ++ P +FP + +T R ++ W+ DP
Sbjct: 16 SSQLTYPGFGRALGTDPTKVLHHLEDLVHYNDSSSTLTFKYTIPPHAVRRGGEMPLSG--FL------AVFDEVTTWAIVAQDRKRRPGLSITLSAQVGPATTXXXXTARRGIQAGDTVQINAKVVKSGKVLAFTEAEAIDVTTGDVICTGRHTKYLPMPFLFELGLGP-LFPLVKMYTNRLPPKYNDDWM-DP 199
BLAST of mRNA_P-lacustris_contig111.902.1 vs. uniprot
Match: A0A7S3Q2W5_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q2W5_9STRA) HSP 1 Score: 56.2 bits (134), Expect = 2.630e-5 Identity = 52/153 (33.99%), Postives = 74/153 (48.37%), Query Frame = 1
Query: 142 ARSLGLYDG---MLVTSVGQQGSMLEAVYTIPENICV-------TGGTFGAGG---RAFLPCGVTTALFDEVSTLAMVIADRTYRPGVSISLSCNMFHPVAP---------GERVTFKSRGLKMGARLGYGEA-SMYREDGKLAARGRHVKHL 531
ARS L D + V ++G L Y +PE+ C + T G+G R F G+ ALFDE++TLA+V D + RPGVS +LS + AP GE + R +K+G + EA + E GK+ A G+H K+L
Sbjct: 48 ARSFLLKDSNPAYITVQVKEKGRYLFT-YKVPESACAKTLCYNTSASTEGSGSNDVRVFQLSGLL-ALFDELTTLAIVNEDDSARPGVSTTLSAEL----APYGLNNLPRAGENIDVDVRVIKIGKNFSFLEAEAKIPESGKIIAIGKHTKYL 194
BLAST of mRNA_P-lacustris_contig111.902.1 vs. uniprot
Match: A0A7S3V839_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V839_9STRA) HSP 1 Score: 56.2 bits (134), Expect = 4.160e-5 Identity = 52/153 (33.99%), Postives = 74/153 (48.37%), Query Frame = 1
Query: 142 ARSLGLYDG---MLVTSVGQQGSMLEAVYTIPENICV-------TGGTFGAGG---RAFLPCGVTTALFDEVSTLAMVIADRTYRPGVSISLSCNMFHPVAP---------GERVTFKSRGLKMGARLGYGEA-SMYREDGKLAARGRHVKHL 531
ARS L D + V ++G L Y +PE+ C + T G+G R F G+ ALFDE++TLA+V D + RPGVS +LS + AP GE + R +K+G + EA + E GK+ A G+H K+L
Sbjct: 48 ARSFLLKDSNPAYITVQVKEKGRYLFT-YKVPESACAKTLCYNTSASTEGSGSNDVRVFQLSGLL-ALFDELTTLAIVNEDDSARPGVSTTLSAEL----APYGLNNLPRAGENIDVDVRVIKIGKNFSFLEAEAKIPESGKIIAIGKHTKYL 194 The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig111.902.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-lacustris_contig111.902.1 >prot_P-lacustris_contig111.902.1 ID=prot_P-lacustris_contig111.902.1|Name=mRNA_P-lacustris_contig111.902.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=366bp MRVAKGVSESLRSPVGREMLEFFTSRVWQMGFARSLGLYDGMLVTSVGQQback to top mRNA from alignment at P-lacustris_contig111:58882..70472- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-lacustris_contig111.902.1 ID=mRNA_P-lacustris_contig111.902.1|Name=mRNA_P-lacustris_contig111.902.1|organism=Pleurocladia lacustris SAG_25_93|type=mRNA|length=11591bp|location=Sequence derived from alignment at P-lacustris_contig111:58882..70472- (Pleurocladia lacustris SAG_25_93)back to top Coding sequence (CDS) from alignment at P-lacustris_contig111:58882..70472- >mRNA_P-lacustris_contig111.902.1 ID=mRNA_P-lacustris_contig111.902.1|Name=mRNA_P-lacustris_contig111.902.1|organism=Pleurocladia lacustris SAG_25_93|type=CDS|length=2196bp|location=Sequence derived from alignment at P-lacustris_contig111:58882..70472- (Pleurocladia lacustris SAG_25_93)back to top |