mRNA_P-lacustris_contig1106.886.1 (mRNA) Pleurocladia lacustris SAG_25_93
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Overview
Homology
BLAST of mRNA_P-lacustris_contig1106.886.1 vs. uniprot
Match: D7FKJ5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKJ5_ECTSI) HSP 1 Score: 412 bits (1058), Expect = 5.010e-135 Identity = 216/240 (90.00%), Postives = 221/240 (92.08%), Query Frame = 2
Query: 107 LLGRNTLRLG-ARPSGLRRRVPASYGRESSTQAAALAKSSAHYDLVIVGSGPAAQKCAIESAKYGKSVCIVDKSSQLGGVCVHTGTIPSKTFREAVLHLTGWRHQGFYGRSSQRARAAVGIPDVLARVQKVEARETEVVRDQLQREGIELISGTARFLPGVEGEPHRVMVLRTREKAEAKTSVYRHIEASLPSVTLSADRFLVACGTRPLRRPDVPFDGSRVFDSDQLLWGGVDKVPRTL 823
+LGR LRLG A GL+R P+ GR SSTQAAALAKSSAHYDLVIVGSGPAAQKCAIESAKYGKSVCIVDKSSQLGGVCVHTGTIPSKTFREAVLHLTGWRHQGFYGRSSQRARAAV IPDVLARV EA+ETEVVRDQLQREGIELISGTARFLPG EGEPHRVMVLRT EK EAKTSVYRHIEASLPSVTLSADRFLVACGTRPLRRPDVPFDGSRVFDSDQLLWGGVD+VPR L
Sbjct: 1 MLGRRHLRLGEALSRGLQRHAPSLCGRASSTQAAALAKSSAHYDLVIVGSGPAAQKCAIESAKYGKSVCIVDKSSQLGGVCVHTGTIPSKTFREAVLHLTGWRHQGFYGRSSQRARAAVAIPDVLARV---EAKETEVVRDQLQREGIELISGTARFLPGSEGEPHRVMVLRTSEKTEAKTSVYRHIEASLPSVTLSADRFLVACGTRPLRRPDVPFDGSRVFDSDQLLWGGVDRVPRDL 237
BLAST of mRNA_P-lacustris_contig1106.886.1 vs. uniprot
Match: A0A835ZER9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZER9_9STRA) HSP 1 Score: 264 bits (674), Expect = 4.340e-78 Identity = 127/208 (61.06%), Postives = 158/208 (75.96%), Query Frame = 2
Query: 227 HYDLVIVGSGPAAQKCAIESAKYGKSVCIVDKSSQLGGVCVHTGTIPSKTFREAVLHLTGWRHQGFYGRSSQRARAAVGIPDVLARVQKVEARETEVVRDQLQREGIELISGTARFLPGVEGEPH---------RVMVLRTREKAEAKTSVYRHIEASLPSVTLSADRFLVACGTRPLRRPDVPFDGSRVFDSDQLLWGGVDKVPRTL 823
HYDL+I+GSGPAAQKCA++SAK G+ V +VDK +GGVCVHTGTIPSKTFREAVLHLTG+RHQGFYGR+ Q R + +PD+L RVQKVE ET++V DQ++REG+E+I+GTARF E + RVMVL+T E++ S YRH++A++ + LSA+ L+ACGTRPLR +PFDG RVFDSDQLLWGGV VPR L
Sbjct: 55 HYDLIIIGSGPAAQKCAVDSAKLGRRVAVVDKLGMIGGVCVHTGTIPSKTFREAVLHLTGFRHQGFYGRAYQPWRERISVPDLLLRVQKVEKTETDIVVDQMRREGVEVITGTARFAEADEDDAFTDATSEGAVRVMVLKTDASHESEASAYRHLDANMAKMALSAENVLIACGTRPLRPAHIPFDGVRVFDSDQLLWGGVRDVPREL 262
BLAST of mRNA_P-lacustris_contig1106.886.1 vs. uniprot
Match: A0A4D9CNB1_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CNB1_9STRA) HSP 1 Score: 252 bits (643), Expect = 1.700e-74 Identity = 114/201 (56.72%), Postives = 154/201 (76.62%), Query Frame = 2
Query: 221 SAHYDLVIVGSGPAAQKCAIESAKYGKSVCIVDKSSQLGGVCVHTGTIPSKTFREAVLHLTGWRHQGFYGRSSQRARAAVGIPDVLARVQKVEARETEVVRDQLQREGIELISGTARFLPGVEGEPHRVMVLRTREKAEAKTSVYRHIEASLPSVTLSADRFLVACGTRPLRRPDVPFDGSRVFDSDQLLWGGVDKVPRTL 823
SAHYDL+++GSGPAAQKCAI+S K G+ V ++DK+SQ+GGVCVHTGTIPSKTFREAVLHLTG+RHQGFYG+S+ + + ++L RVQKVE E EV R Q++R G+ L++GTARFL + H + + + + + +Y+H EASLP L+A++ ++ACGTRP+R+ + FDG RVFDSDQLLWGG+D+VPR+
Sbjct: 56 SAHYDLIVIGSGPAAQKCAIDSVKRGRRVAMIDKNSQMGGVCVHTGTIPSKTFREAVLHLTGYRHQGFYGKSTFTSSRRSSMNEILQRVQKVEDVEAEVTRHQMRRNGVHLVTGTARFLENGANDAHVKLAVLLTDPEQERKGIYKHREASLPKTLLTAEKVMIACGTRPVRQEETVFDGKRVFDSDQLLWGGIDRVPRSF 256
BLAST of mRNA_P-lacustris_contig1106.886.1 vs. uniprot
Match: A0A662X7S1_9STRA (Pyr_redox_2 domain-containing protein (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X7S1_9STRA) HSP 1 Score: 239 bits (611), Expect = 2.000e-72 Identity = 118/204 (57.84%), Postives = 151/204 (74.02%), Query Frame = 2
Query: 215 KSSAHYDLVIVGSGPAAQKCAIESAKYGKSVCIVDKSSQLGGVCVHTGTIPSKTFREAVLHLTGWRHQGFY-GRSSQRARAAVGIPDVLARVQKVEARETEVVRDQLQREGIELISGTARFLPGVEGEPHRVMVLRTREKAEAKTSVYRHIEASLPSVTLSADRFLVACGTRPLRRPDVPFDGSRVFDSDQLLWGGVDKVPRTL 823
++S H+DL+++GSGPA QKCAI+SAK+GKSV ++DK LGGVCVHTGT+PSKTFREA LHLTG+RH+ FY G+++ R G+ D+L RV+KVE ET++ R QL R G+ELI+GTARFL G+ + + VL + + EA T RH A + L+AD+FLV GTRP RRPD+PFDG +FDSDQLLWGGV VPR L
Sbjct: 53 RASEHFDLIVIGSGPAGQKCAIDSAKHGKSVAVIDKRDMLGGVCVHTGTVPSKTFREATLHLTGYRHRSFYNGQTAPTKR--FGVEDILQRVKKVEGAETDITRHQLLRNGVELINGTARFL---SGDKNMIAVL-SNDSYEAATDAKRHSSADICKRVLTADKFLVCVGTRPARRPDIPFDGETIFDSDQLLWGGVKTVPRRL 250
BLAST of mRNA_P-lacustris_contig1106.886.1 vs. uniprot
Match: A0A6A3FH22_9STRA (Putative soluble pyridine nucleotide transhydrogenase n=16 Tax=Phytophthora TaxID=4783 RepID=A0A6A3FH22_9STRA) HSP 1 Score: 239 bits (610), Expect = 5.430e-69 Identity = 117/203 (57.64%), Postives = 147/203 (72.41%), Query Frame = 2
Query: 215 KSSAHYDLVIVGSGPAAQKCAIESAKYGKSVCIVDKSSQLGGVCVHTGTIPSKTFREAVLHLTGWRHQGFYGRSSQRARAAVGIPDVLARVQKVEARETEVVRDQLQREGIELISGTARFLPGVEGEPHRVMVLRTREKAEAKTSVYRHIEASLPSVTLSADRFLVACGTRPLRRPDVPFDGSRVFDSDQLLWGGVDKVPRTL 823
++S H+DL+++GSGPA QKCAI+SAK+GKSV I+DK +GGVCVHTGT+PSKTFREA LHLTG+RH+ FY + ++ G+ D+L RV+KVE ET++ R QL R G++LI+GTARFLPG H V VL + E E T RH A + L+AD+FLV GTRP RRPD+PFDG +FDSDQLLWG V VPR L
Sbjct: 51 RASEHFDLIVIGSGPAGQKCAIDSAKHGKSVAIIDKRDMMGGVCVHTGTVPSKTFREAALHLTGYRHKAFYNGQAGPSKR-FGVEDILQRVKKVEDAETDITRHQLMRNGVQLINGTARFLPG---NNHMVAVL-SNESYETATDAKRHTSADICKRVLTADKFLVCVGTRPARRPDIPFDGETIFDSDQLLWGKVKTVPRRL 248
BLAST of mRNA_P-lacustris_contig1106.886.1 vs. uniprot
Match: A0A3R7H1X6_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7H1X6_9STRA) HSP 1 Score: 238 bits (607), Expect = 1.670e-68 Identity = 122/208 (58.65%), Postives = 152/208 (73.08%), Query Frame = 2
Query: 215 KSSAHYDLVIVGSGPAAQKCAIESAKYGKSVCIVDKSSQLGGVCVHTGTIPSK--TFREAVLHLTGWRHQGFY---GRSSQRARAAVGIPDVLARVQKVEARETEVVRDQLQREGIELISGTARFLPGVEGEPHRVMVLRTREKAEAKTSVYRHIEASLPSVTLSADRFLVACGTRPLRRPDVPFDGSRVFDSDQLLWGGVDKVPRTL 823
++S H+DL+++GSGPA QKCAI+SAK+GKSV IVDK LGGVCVHTGT+PSK TFREA +HLTG+RH+ FY G S+R +G+ D+L RV+KVEA ET++ R QLQR G++LISGTARFL G + H + VL + E+ E T RH EA + L+AD+FLV GTRP R PD+PFDG +FDSDQLLWG V VPR L
Sbjct: 51 RASEHFDLIVIGSGPAGQKCAIDSAKHGKSVAIVDKRDMLGGVCVHTGTVPSKASTFREAAMHLTGYRHRAFYNGHGGISKR----IGVEDILQRVKKVEAAETDITRHQLQRNGVQLISGTARFLAG---DSHMLAVL-SNEEYETATDAKRHTEADICKRVLTADKFLVCVGTRPARHPDIPFDGETIFDSDQLLWGKVKMVPRRL 250
BLAST of mRNA_P-lacustris_contig1106.886.1 vs. uniprot
Match: A0A5D6XJI3_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XJI3_9STRA) HSP 1 Score: 236 bits (601), Expect = 8.560e-68 Identity = 119/205 (58.05%), Postives = 148/205 (72.20%), Query Frame = 2
Query: 215 KSSAHYDLVIVGSGPAAQKCAIESAKYGKSVCIVDKSSQLGGVCVHTGTIPSKTFREAVLHLTGWRHQGFY-GRSSQRARAAVGIPDVLARVQKVEARETEVVRDQLQREGIELISGTARFLPGVEGEPHRVMV-LRTREKAEAKTSVYRHIEASLPSVTLSADRFLVACGTRPLRRPDVPFDGSRVFDSDQLLWGGVDKVPRTL 823
K+S H+DLV++GSGPA QKCAI+ AK+GKSV ++DK LGGVC+HTGT+PSKTFREA LHLT +RH+ FY G SS R GI D+L RV+KVE ET++ R QL R G+ELI+GTARFLP P + MV + + + T RH AS+ L+AD+FL+A GTRP RRPD+PFDG +FDSDQLLWGGV VP+ L
Sbjct: 41 KASEHFDLVVIGSGPAGQKCAIDHAKHGKSVAVIDKRDMLGGVCIHTGTVPSKTFREATLHLTAYRHRSFYDGHSSPGKR--FGIEDILQRVKKVEHAETDITRHQLLRNGVELINGTARFLPS----PDKNMVAVLSNDSYMTATDAKRHSSASICKRVLTADKFLIAVGTRPARRPDIPFDGETIFDSDQLLWGGVKTVPKRL 239
BLAST of mRNA_P-lacustris_contig1106.886.1 vs. uniprot
Match: A0A0P1AKW9_PLAHL (Soluble pyridine nucleotide n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AKW9_PLAHL) HSP 1 Score: 236 bits (603), Expect = 9.120e-68 Identity = 116/203 (57.14%), Postives = 147/203 (72.41%), Query Frame = 2
Query: 215 KSSAHYDLVIVGSGPAAQKCAIESAKYGKSVCIVDKSSQLGGVCVHTGTIPSKTFREAVLHLTGWRHQGFYGRSSQRARAAVGIPDVLARVQKVEARETEVVRDQLQREGIELISGTARFLPGVEGEPHRVMVLRTREKAEAKTSVYRHIEASLPSVTLSADRFLVACGTRPLRRPDVPFDGSRVFDSDQLLWGGVDKVPRTL 823
++S H+DL+++GSGPA QKCAI+SAK+GKSV I+DK LGGVCVHTGTIPSKTFREA LHLTG+RH+ FY ++ G+ D+L RV+KVE+ ET++ R QL R G++LI+GTARFLPG + H + VL + E E T RH A + L+AD+FL+ GTRP RR D+PFDG +FDSDQLLWG V VPR L
Sbjct: 31 RASEHFDLIVIGSGPAGQKCAIDSAKHGKSVAIIDKRDMLGGVCVHTGTIPSKTFREAALHLTGYRHKAFYNGQGGPSKR-FGVEDILQRVKKVESAETDITRHQLLRNGVQLINGTARFLPGSK---HMIAVL-SNESYETATDAQRHSSADICKRVLTADKFLLCVGTRPARRADIPFDGETIFDSDQLLWGKVKSVPRRL 228
BLAST of mRNA_P-lacustris_contig1106.886.1 vs. uniprot
Match: K3WL68_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WL68_GLOUD) HSP 1 Score: 236 bits (601), Expect = 9.370e-68 Identity = 119/204 (58.33%), Postives = 148/204 (72.55%), Query Frame = 2
Query: 215 KSSAHYDLVIVGSGPAAQKCAIESAKYGKSVCIVDKSSQLGGVCVHTGTIPSKTFREAVLHLTGWRHQGFY-GRSSQRARAAVGIPDVLARVQKVEARETEVVRDQLQREGIELISGTARFLPGVEGEPHRVMVLRTREKAEAKTSVYRHIEASLPSVTLSADRFLVACGTRPLRRPDVPFDGSRVFDSDQLLWGGVDKVPRTL 823
K+S H+DL+++GSGPA QKCAI+SAK+GKSV I+DK GGVCVHTGT+PSKTFREA LHLT +RH+ FY G+SS R GI D+L RV+KVE ET++ R QL R G+ELI+GTARFLP + + + VL + + T RH A + L+AD+FL+A GTRP RRPD+PFDG VFDSDQLLWGGV VP+ L
Sbjct: 45 KASEHFDLIVIGSGPAGQKCAIDSAKHGKSVAIIDKRDMHGGVCVHTGTVPSKTFREATLHLTAYRHRSFYDGQSSPTKR--FGIEDILQRVKKVEHAETDITRHQLLRNGVELINGTARFLP--DANKNMIAVL-SNDSYTTATDAKRHASADICKRVLTADKFLIAVGTRPARRPDIPFDGQAVFDSDQLLWGGVKTVPKRL 243
BLAST of mRNA_P-lacustris_contig1106.886.1 vs. uniprot
Match: M4BCY3_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BCY3_HYAAE) HSP 1 Score: 235 bits (599), Expect = 2.510e-67 Identity = 116/203 (57.14%), Postives = 145/203 (71.43%), Query Frame = 2
Query: 215 KSSAHYDLVIVGSGPAAQKCAIESAKYGKSVCIVDKSSQLGGVCVHTGTIPSKTFREAVLHLTGWRHQGFYGRSSQRARAAVGIPDVLARVQKVEARETEVVRDQLQREGIELISGTARFLPGVEGEPHRVMVLRTREKAEAKTSVYRHIEASLPSVTLSADRFLVACGTRPLRRPDVPFDGSRVFDSDQLLWGGVDKVPRTL 823
++S H+DL+++GSGPA QKCAI+SAK+G SV IVDK LGGVCVHTGT+PSKTFREA LHLTG+RH+ FY + ++ VG+ D+L RV KVE ET++ R QL R G++LI+GTARF+PG H + VL + E E T RH A++ L+AD FLV GTRP RR D+PFDG +FDSDQLLWG V VPR L
Sbjct: 48 RASEHFDLIVIGSGPAGQKCAIDSAKHGYSVAIVDKRDMLGGVCVHTGTVPSKTFREAALHLTGYRHRAFYNGQAGPSKR-VGVEDILQRVNKVEKAETDITRHQLMRNGVQLITGTARFMPG---NSHMIAVL-SNESYETATDAKRHSSANICKRVLTADNFLVCVGTRPARRADIPFDGETIFDSDQLLWGKVKAVPRRL 245 The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig1106.886.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-lacustris_contig1106.886.1 >prot_P-lacustris_contig1106.886.1 ID=prot_P-lacustris_contig1106.886.1|Name=mRNA_P-lacustris_contig1106.886.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=248bp MLLGRNTLRLGARPSGLRRRVPASYGRESSTQAAALAKSSAHYDLVIVGSback to top mRNA from alignment at P-lacustris_contig1106:36060..45497- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-lacustris_contig1106.886.1 ID=mRNA_P-lacustris_contig1106.886.1|Name=mRNA_P-lacustris_contig1106.886.1|organism=Pleurocladia lacustris SAG_25_93|type=mRNA|length=9438bp|location=Sequence derived from alignment at P-lacustris_contig1106:36060..45497- (Pleurocladia lacustris SAG_25_93)back to top Coding sequence (CDS) from alignment at P-lacustris_contig1106:36060..45497- >mRNA_P-lacustris_contig1106.886.1 ID=mRNA_P-lacustris_contig1106.886.1|Name=mRNA_P-lacustris_contig1106.886.1|organism=Pleurocladia lacustris SAG_25_93|type=CDS|length=1488bp|location=Sequence derived from alignment at P-lacustris_contig1106:36060..45497- (Pleurocladia lacustris SAG_25_93)back to top |