mRNA_P-lacustris_contig1104.876.1 (mRNA) Pleurocladia lacustris SAG_25_93

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-lacustris_contig1104.876.1
Unique NamemRNA_P-lacustris_contig1104.876.1
TypemRNA
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Homology
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BLAST of mRNA_P-lacustris_contig1104.876.1 vs. uniprot
Match: D8LCG1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LCG1_ECTSI)

HSP 1 Score: 429 bits (1104), Expect = 2.440e-135
Identity = 288/520 (55.38%), Postives = 331/520 (63.65%), Query Frame = 1 
Query:  820 MNEFKGGNRFVGGAQFKASSAGRNRHHGGGAGG----ACGECLQVREALRRSRLESRELRGSLFRAGEVIKQLKLAEALRRRKANHGSSGRSRRQGLLSASSAXXSNESSRRLVSFLLATSVGSDGETGGVGSSRLEQGAA--------DADADETVGTPSRGSLLKRVQKLERELRLADFRNTRSMGAVAGAEHGRARKNGVYDEVIENIFTMPHQQQKNASTETIITDVLQMGQGRTRSDGTCSS-SVRDWEDPPPCSKCSLLNDRLLGEATKVSGLITRIQEYQNEAERLQEKLVGMGNARAQAAELQEKVYVLTSHAEDQARAKD---LEIERLVADLDRSRNQSMEIEEQASKASEHLAALREELASKESLLREVEKELSNLRDAVHSERASRELADHNLAALRRKAAEERAWVGQTKEKLETEKAARRHSESQAAAADLTHRRALKAALNNCIRLCVVAPTVNINLGDRSRSFCSGLPEERIRAFVEGSVLPRFTRVLLQPGSEGGST--SLPS 2325
            MN FKGGNRFVGGAQFK S++ RN  HG         +CG CLQVREALRRSR+E R+LRGSLFRA  VIKQL L +A RRR  N   +  ++    LS SS   +  +                                        D  A E    PSR +LL RV++LERELRLADFR+ RS+GA  GAEH RARKN + DEV  N                      +   G+T          V DWE PPPC KCS+LNDRLLGEATKV+GL+ RIQE+Q E +RLQ ++V    A A+A E+QEKV  LTS AE Q RAK+    E+ERLVADLDR+R Q+ E E QA +A E   AL++EL SKESLL +  KEL   R A+ SERASRE  D  + ALRRK A ERA  G+TK +L   KAARRHSESQAAAAD THR+ALKAALNNC+RLCVVAPTVNINL DRSRSFCSGLPEERIRAFVE SVLPRFTRVLLQPGSEGGS   +LPS
Sbjct:    1 MNGFKGGNRFVGGAQFKGSNSSRNGQHGXXXXXXXXKSCGGCLQVREALRRSRVECRDLRGSLFRAEHVIKQLTLTKATRRRGPNQSGNYTAQLGLQLSLSSPSLAGGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRNDGHAGEA---PSRENLLSRVRELERELRLADFRDARSLGAAVGAEHSRARKNSMDDEVNLNKSDXXXXXXXXXXXXXXX-XXXRRALGKTSGXXXXXXXGVWDWEGPPPCRKCSVLNDRLLGEATKVNGLMRRIQEHQEELKRLQGEIVRTSGAHAKAIEMQEKVDALTSQAEGQTRAKEKAGAEMERLVADLDRTRTQATEHEGQARRALEQQQALQDELFSKESLLGQAAKELETARAALESERASREQTDRTVVALRRKVAGERAGAGKTKGELAAAKAARRHSESQAAAADATHRKALKAALNNCVRLCVVAPTVNINLDDRSRSFCSGLPEERIRAFVEESVLPRFTRVLLQPGSEGGSAPPALPS 516
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BLAST of mRNA_P-lacustris_contig1104.876.1 vs. uniprot
Match: A0A7S3XWJ8_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XWJ8_HETAK)

HSP 1 Score: 73.2 bits (178), Expect = 1.150e-10
Identity = 36/67 (53.73%), Postives = 49/67 (73.13%), Query Frame = 1 
Query: 2110 HRRALKAALNNCIRLCVVAPTVNINLGDRSRSFC--SGLPEERIRAFVEGSVLPRFTRVLLQPGSEG 2304
            H++AL+AALN+ +RLCVVAPTVN+NL   +      + LPE +IR+FVEG +LP+F R+ LQ  S G
Sbjct:  124 HKQALEAALNSVVRLCVVAPTVNVNLAAPAAPLAMKAPLPESKIRSFVEGEILPKFARIFLQRDSAG 190
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BLAST of mRNA_P-lacustris_contig1104.876.1 vs. uniprot
Match: A0A7S3AGN7_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3AGN7_9EUKA)

HSP 1 Score: 57.4 bits (137), Expect = 4.720e-6
Identity = 25/58 (43.10%), Postives = 39/58 (67.24%), Query Frame = 1 
Query: 2116 RALKAALNNCIRLCVVAPTVNINLGDRSRSFCSGLPEERIRAFVEGSVLPRFTRVLLQ 2289
            R L+ AL + +RLCVVAPTVN+  G +  ++ + +P +RI+  +EG +LP F +V  Q
Sbjct:   44 RGLEEALQSSVRLCVVAPTVNVTFGGQHTNYRATMPRDRIQTILEGQILPGFAQVFTQ 101
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BLAST of mRNA_P-lacustris_contig1104.876.1 vs. uniprot
Match: A0A485KJ64_9STRA (Aste57867_8007 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KJ64_9STRA)

HSP 1 Score: 55.1 bits (131), Expect = 6.570e-5
Identity = 26/61 (42.62%), Postives = 41/61 (67.21%), Query Frame = 1 
Query: 2107 THRRALKAALNNCIRLCVVAPTVNINLGDRSRSFCSGLPEERIRAFVEGSVLPRFTRVLLQ 2289
            TH ++L+ A+ + +RLCVVAPTVN++L  +     S LP++ IR  V+  +LP F+ + LQ
Sbjct:  107 THAKSLEKAMQSLVRLCVVAPTVNVHLSGQVLPCKSVLPKDAIRTIVQKDILPVFSSIFLQ 167
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BLAST of mRNA_P-lacustris_contig1104.876.1 vs. uniprot
Match: A0A6G0XE29_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XE29_9STRA)

HSP 1 Score: 58.2 bits (139), Expect = 7.270e-5
Identity = 31/73 (42.47%), Postives = 46/73 (63.01%), Query Frame = 1 
Query: 2107 THRRALKAALNNCIRLCVVAPTVNINLGDRSRSFCSGLPEERIRAFVEGSVLPRFTRVLLQP--GSEGGSTSL 2319
            TH +AL+ A+ + +RLCVVAPTVN++L  +     S LP++ IR  V+  +LP F+ + LQ   G+    TSL
Sbjct:  571 THTKALEKAMQSLVRLCVVAPTVNVHLSGQILPCKSTLPKDAIRTIVQNDILPVFSSIFLQQEEGTSPTGTSL 643
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig1104.876.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D8LCG1_ECTSI2.440e-13555.38Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S3XWJ8_HETAK1.150e-1053.73Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S3AGN7_9EUKA4.720e-643.10Hypothetical protein n=1 Tax=Haptolina ericina Tax... [more]
A0A485KJ64_9STRA6.570e-542.62Aste57867_8007 protein n=1 Tax=Aphanomyces stellat... [more]
A0A6G0XE29_9STRA7.270e-542.47Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig1104contigP-lacustris_contig1104:44710..52405 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score437.6
Seed ortholog evalue1.3e-119
Seed eggNOG ortholog2880.D8LCG1
Hectar predicted targeting categoryother localisation
EggNOG OGs2D168@1,2SGVV@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons8
Model size2788
Cds size2433
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig1104.876.1prot_P-lacustris_contig1104.876.1Pleurocladia lacustris SAG_25_93polypeptideP-lacustris_contig1104 44756..51374 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815395.1399267-UTR-P-lacustris_contig1104:44709..447551622815395.1399267-UTR-P-lacustris_contig1104:44709..44755Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig1104 44710..44755 -
1693493520.031839-UTR-P-lacustris_contig1104:44709..447551693493520.031839-UTR-P-lacustris_contig1104:44709..44755Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig1104 44710..44755 -
1622815395.234561-UTR-P-lacustris_contig1104:51374..513991622815395.234561-UTR-P-lacustris_contig1104:51374..51399Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig1104 51375..51399 -
1693493520.1198285-UTR-P-lacustris_contig1104:51374..513991693493520.1198285-UTR-P-lacustris_contig1104:51374..51399Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig1104 51375..51399 -
1622815395.2473264-UTR-P-lacustris_contig1104:52121..524051622815395.2473264-UTR-P-lacustris_contig1104:52121..52405Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig1104 52122..52405 -
1693493520.1328785-UTR-P-lacustris_contig1104:52121..524051693493520.1328785-UTR-P-lacustris_contig1104:52121..52405Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig1104 52122..52405 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815395.1503105-CDS-P-lacustris_contig1104:44755..454091622815395.1503105-CDS-P-lacustris_contig1104:44755..45409Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1104 44756..45409 -
1693493520.0434923-CDS-P-lacustris_contig1104:44755..454091693493520.0434923-CDS-P-lacustris_contig1104:44755..45409Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1104 44756..45409 -
1622815395.1605139-CDS-P-lacustris_contig1104:45985..462371622815395.1605139-CDS-P-lacustris_contig1104:45985..46237Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1104 45986..46237 -
1693493520.0540798-CDS-P-lacustris_contig1104:45985..462371693493520.0540798-CDS-P-lacustris_contig1104:45985..46237Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1104 45986..46237 -
1622815395.174175-CDS-P-lacustris_contig1104:46794..468571622815395.174175-CDS-P-lacustris_contig1104:46794..46857Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1104 46795..46857 -
1693493520.0672998-CDS-P-lacustris_contig1104:46794..468571693493520.0672998-CDS-P-lacustris_contig1104:46794..46857Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1104 46795..46857 -
1622815395.1863463-CDS-P-lacustris_contig1104:47733..478591622815395.1863463-CDS-P-lacustris_contig1104:47733..47859Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1104 47734..47859 -
1693493520.0783787-CDS-P-lacustris_contig1104:47733..478591693493520.0783787-CDS-P-lacustris_contig1104:47733..47859Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1104 47734..47859 -
1622815395.1972995-CDS-P-lacustris_contig1104:48642..488641622815395.1972995-CDS-P-lacustris_contig1104:48642..48864Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1104 48643..48864 -
1693493520.0893435-CDS-P-lacustris_contig1104:48642..488641693493520.0893435-CDS-P-lacustris_contig1104:48642..48864Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1104 48643..48864 -
1622815395.2105484-CDS-P-lacustris_contig1104:49126..496121622815395.2105484-CDS-P-lacustris_contig1104:49126..49612Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1104 49127..49612 -
1693493520.097851-CDS-P-lacustris_contig1104:49126..496121693493520.097851-CDS-P-lacustris_contig1104:49126..49612Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1104 49127..49612 -
1622815395.2210755-CDS-P-lacustris_contig1104:50744..513741622815395.2210755-CDS-P-lacustris_contig1104:50744..51374Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1104 50745..51374 -
1693493520.1067827-CDS-P-lacustris_contig1104:50744..513741693493520.1067827-CDS-P-lacustris_contig1104:50744..51374Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1104 50745..51374 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-lacustris_contig1104.876.1

>prot_P-lacustris_contig1104.876.1 ID=prot_P-lacustris_contig1104.876.1|Name=mRNA_P-lacustris_contig1104.876.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=811bp
MLSSTSDQHHREPRRVKGGSARGESFRVSTSNDRPKWTSSREGLSNSASM
PSGVSQARPEKVISTSPQQQHKTRAHQNTIKAWRNDPSHVVNETTATIIA
RRQSLESSQSQARAPAVKSLGRSSTCTTETFSNAGSGINGSRGISSAVSV
ATSSDPEVLHEEIQRLQAALMNEFKGGNRFVGGAQFKASSAGRNRHHGGG
AGGACGECLQVREALRRSRLESRELRGSLFRAGEVIKQLKLAEALRRRKA
NHGSSGRSRRQGLLSASSAAASNESSRRLVSFLLATSVGSDGETGGVGSS
RLEQGAADADADETVGTPSRGSLLKRVQKLERELRLADFRNTRSMGAVAG
AEHGRARKNGVYDEVIENIFTMPHQQQKNASTETIITDVLQMGQGRTRSD
GTCSSSVRDWEDPPPCSKCSLLNDRLLGEATKVSGLITRIQEYQNEAERL
QEKLVGMGNARAQAAELQEKVYVLTSHAEDQARAKDLEIERLVADLDRSR
NQSMEIEEQASKASEHLAALREELASKESLLREVEKELSNLRDAVHSERA
SRELADHNLAALRRKAAEERAWVGQTKEKLETEKAARRHSESQAAAADLT
HRRALKAALNNCIRLCVVAPTVNINLGDRSRSFCSGLPEERIRAFVEGSV
LPRFTRVLLQPGSEGGSTSLPSSSNNNVTCGGGGGRTSIEAARNIVTPTS
RVRSSPSRCSSSSSSSSSKVKIAAASPAMGLTAAAAIDDPAADQHCSAQS
DDEYEGGGGGSEGTADSFEGSRQGQGDFDKWLPGPARRHANVDREACSMR
FPDAYGGVWC*
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mRNA from alignment at P-lacustris_contig1104:44710..52405-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-lacustris_contig1104.876.1 ID=mRNA_P-lacustris_contig1104.876.1|Name=mRNA_P-lacustris_contig1104.876.1|organism=Pleurocladia lacustris SAG_25_93|type=mRNA|length=7696bp|location=Sequence derived from alignment at P-lacustris_contig1104:44710..52405- (Pleurocladia lacustris SAG_25_93)
ATGATCTCCGCCCAGCCCGCTCCTCTGCCGCCGTTGAGCAGCGACGATTC
CCCTCCGCCACACCCCCATCAGCATCGAAGACATTCATTCGAAGCATTAG
CAGTCTACGAAGGCGCTTCTCCAGTGCCAGCCAACCGCCTTTTCGAGGCG
AAAGCATTGAATCTCGTGCCGAGACCGGCAACAATTGCGTCTTCTACCCG
GTCGTCGGCTTCTCCCAGCTCATTCTTTGTCTCTTCGTCATCGTCGCCCT
CCTTACCCAGTGGGTGTCAGCCCGCGCCAAGGTAGTCATAGTACATGAGG
TTTGGGCCAGTGTTTTTTTTTGTTTTACAAAACGTACACCTTTTACTGCC
AAGATATGTTGAAAGCGGGGACTTAAAAACCCCTCAGCCCCAATACTGCT
GTCCTTCACCCCTCCCATGACTATAATCCGATACACAAGATGAAACCAAA
CTATCTTGTTGATTGAGCCTGTTACCCAGTTATCATTGTAGCTTATGCAA
TTCATCATTGTAGCTTATGCAAGGGAGTAGAGACACAAGTTGGTCACTAT
ATAAATAAAGCCATTCATTGCTAATAATCTATCTTGGACATCATTTCCAC
AGACAGAGATGGTTTTGTTTTGTTTTTATTTTTAGGAAAAAAAAAAGTCT
CTGTCTGTGGAAATGATGTCAGAAACGCTATGCTGGAAACACAGCTGCGA
TATGCGTACAAGTATCTCTGTTCAGTAGACGCTCCGCCTTAGGATGAGTG
AGTATGGTCAGCGTATAAATATGCGTAAAAAAAAGTACCGTTTCTTGGGC
TGCGCGCTGTGCCGTACAGCAGCATCGCTTTTCGTGTTTGGTTTCCGCAT
ACAAAATGCTTGATACTAGTATGTAGACGAGGGCACAATGTTGACGTTCC
GAAAAGAACCGCGCATCAATGGCATTGACCCCGTATGGCCATCCCTCGCA
TGTAGACCTGACAAGGGGAACAAAACGACTAACGGTGCTTACACGCGAAA
ATGCAGGCATGACAATGACGTGGCAAGGCTGATGTTGTCTTCGACTAGTG
ATCAACACCATCGGGAGCCAAGGCGGGTCAAGGGTGGTAGCGCTCGTGGT
GAATCATTTCGGGTCAGCACCAGTAACGACAGACCCAAATGGACGTCCTC
GCGCGAAGGGCTCTCTAACTCTGCGAGTATGCCTTCGGGAGTGAGTCAGG
CTCGCCCGGAAAAGGTGATTTCTACCTCACCCCAGCAGCAGCACAAGACC
AGAGCCCATCAAAACACCATCAAGGCCTGGCGGAATGACCCCAGTCATGT
CGTGAATGAAACCACAGCGACGATCATAGCCCGCAGGCAGTCGCTAGAAA
GCTCCCAATCCCAAGCGAGGGCTCCTGCCGTAAAATCCTTGGGAAGGAGT
AGCACTTGTACCACGGAGACATTCAGCAACGCCGGTAGTGGTATTAATGG
TAGCAGAGGCATCAGTAGCGCAGTGTCTGTTGCAACGAGCAGCGATCCTG
AGGTGTTGCACGAAGAAATCCAACGGCTGCAAGCGGCGCTTATGAACGAG
TTCAAGGGAGGGAACCGTTTCGTGGGCGGCGCTCAGTTCAAAGCCTCAAG
TGCCGGTCGAAATCGTCACCATGGTGGTGGCGCTGGGGGGGCCTGCGGCG
AGTGCCTGCAGGTTTGAATATCTGAATAAAGACCACCAAATAGCTAGCCT
AACTTACTCTTCAAAATGAGTGTAGGCACGGCGACAACCACCCTACCCCA
TGTCTGTAGGTGTGAAAGGAGGTGCTTTGACACAAGGACGGGGCGCATTG
GTCAGAGGGGTGGAGGGAGGGGGAGGGGAGGGCCGCATCTTGTTGCTTCC
CCGAAAATCACAGCGCTACGCGGTAACGCGGTGGTATGGAAATTTCTACT
TTTTGTTGTATGGAATTGTATGAAAACGGAAATTCCATCGTGAAAATTTC
CATGCCGTTTCGGTGGAAGCAGGTGGAAAACATCACCACTTTCGGTTGTA
TGGAATGGCATAGAAAATCAACCCGCGACTTTCCATGCCGTTCCGCCACC
TGTTTCAGTGCCCACATATTTCCATCCCACTCACAGCATCATATTTCCCA
TCCCACTCATTTCCATCATACTCTCTTCCCACCTACTCCCATCCACGCGC
TTCCGTAATTCCCATCCTCAAGTACCCTCCCCCAATGCGAACATCTCCCT
GCCGGCGACCCTGCACCCCCAACTCATCCCCCCACCCGGTGCGCTACATA
AACAAGGCACGAAAGGAGAGGGGGGGGGTAGGCTCTCTCTCTCTTTCGCT
CTCTCTCTCTCGTGGGTTTGTGTCTCTCTTTCTTTTGTTTCTTTTCTTTT
CTCTATCAGTTTTCGCTGCGATCTCTCTCTGCTCCTTGTCTCCACAAAAG
AAAACGCATGTACCGTGGAAGGATGCGACCAGGCAGTTGTGACATCTCGA
ATGAGAATGGCGAATCTGAAGCACAGTCAAGCGTAGACAGTTGCGACCGT
TTTTCGTCCCGCCGACAATACATGTGCTTCGCATTCCATGCCGTCATCGA
AATGGTTTTCCATATTTTCCATCCCATCGTGAAAAAAACATCCATCATTT
TCCATCGCAACGCGAACAGCTTTTACCACGTTGTTTTACCATCCCCTAAA
CAATCCGCCTGCAGCGCGCATAAACGTTACAACGAGTGGTAACGAGTGGT
AACGCGCTATGGAAAATCTAAGGCATGTGTTTCAATGTGACAGAAATGTC
TCAAACTACAAAGGCAAAGCAGTCGAACGGCATCTACCCACAGGTGCGAG
AAGCGCTGCGTCGGTCCCGGCTGGAGAGCCGGGAGCTGAGGGGATCGCTT
TTCCGGGCCGGGGAAGTCATCAAGCAGCTGAAATTGGCCGAAGCTCTCCG
GCGACGAAAGGCGAACCACGGTAGCAGCGGTCGCTCGAGACGGCAGGGGC
TACTGTCGGCATCATCGGCAGCAGCATCGAACGAAAGCAGCAGAAGGTTG
GTATCGTTCCTGCTGGCTACCAGCGTCGGCAGCGACGGTGAAACAGGAGG
AGTAGGATCGAGCAGGTTGGAACAAGGTGCTGCTGATGCTGATGCTGATG
AGACTGTTGGAACGCCGTCTCGAGGCAGTCTGCTGAAGAGGGTACAGAAG
CTTGAGCGCGAGCTTCGTCTGGCCGATTTTCGGAACACGAGGAGCATGGG
GGCAGTCGCGGGAGCAGAGCACGGTCGGGCACGGAAAAATGGCGTGTACG
ATGAGGTGATAGAAAATATATTTACTATGGTGCAAATCCTTTGGTCGTTC
TGCCGAAAAATGAGGCAAATTGCTCGAAAAATCACGTGATCGGAGGACGG
CGGGCTTTCCCACACAAGCAGTGCTACCGTGGAATGCCTTCGCCGCTAAG
GGATTAAAGTAGCCATCGCAACAGACGGCGAGTCGGACTCGAACCCTTGT
TCCCATGTACGATCAGCGGATCTGCGACTCGCCACGTGATCCTTACGTAA
ATCAATGCACATTTTCCCCAGTTCCAGTTGCACTTCGACAGCCACACCAA
CAGCAAAAAAATGCCTCCACCGAAACCATCATCACCGACGTCCTTCAAAT
GGGACAGGGGAGAACGAGAAGCGATGGCACCTGTAGTAGCAGTGTCAGGG
ATTGGGAGGATCCTCCTCCGTGTTCCAAGTGCTCTTTGCTGAACGATCGA
CTGCTGGGAGAGGCGACCAAGGTTAGCGGTTTGATAACGCGGATTCAAGA
ATATCAGAACGAGGTGGGTAATCTAGTTGGCTTTGGTGCGAGAATGGTTC
CAGAAGTTGCCAAAAGGTTCCAAAAGGTTCCAAATCATGAAGTCATACAC
CAGTAAAAGGTCGGGTAGGAGTTAGTTACTGGGAAATGACGAACTATCGA
ACAGGAAGCAAGCTCGATTTTCAGAAGGACACGCTGGTCAATGACGCTAA
CAAGGCGAGGCTGGGTTCGTAATCGACGGAAACGTCTACAAAGGCAGTCT
CCCCTTTGCCGTTTCATTGTCAAGCCGTCCGTACAGAGTCATCATCACAC
ACACCACACCGCGGATGAACGAACAAGCATTTTCCTTTCTGGCCCTTGGA
AGAGCGGCGCAGCACGACCATCTTAGGTGCAAGAAAAGACGAGGCAACAA
AGGGAACAACCTATCCGTTACATGTCGAGGTTCTCGCTCTCACCGTTTGC
TGTGTTCCTTTTTCTGGCCACCCACAAATCAAGTCCTTTCAACTTTCTTG
AGGTGAACCAGCCGAGGAGTACATTCATACGCCTTCGAACTACGACCTAC
TCTCACTCACGCCTATACGCCACCCTGCCGAAGTCATCGTTCATGCGCCG
TAGCGCGCGTAGGCGTTCGTGGACCTCATGTTGCCTCATCCCAATGTTTC
CGCACGCAGAACGGAAACAGCGCAGTTGCTAACAACACAACTACTGCCAG
GTTACGGCCCCCGTTTTTCCTCTCCAGGACCGTTTGTTGTTTGTCGCTCG
CGTCGTTTTTTAATCGTCGTCGTCTTGTCGCCTCCGACAATGAAAGGCGG
AACGGCTGCAGGAGAAGCTGGTCGGGATGGGCAACGCGCGGGCGCAGGCT
GCGGAGTTGCAGGAGAAGGTGTACGTGCTCACGAGTCACGCGGAAGATCA
GGCGCGGGCAAAGGACCTGGAGGTATTCAGAGGTTGCACACAGCCTATCG
CTTTCACTCATGTGTTCCAGTTGTGCTCATTTTTTTTAAAACTTTGCCTC
CTCCTGCTGCTATACGCTCGACGATGATGTTTGAGCAACTTTTGACTGGT
CCTAAGAATAAAATACGGGCAGCTCTCAGCCTTGGCCGCTACCGCGAAGA
AAAAGATGTGCGATAGTCTGGGTAGGTGCGGCATTCTGTTGCCTTGTGGT
GTGGATATGCTACTCCGATATGCTCACATCCAAGCAACGAAATCACGCTA
GTTTGATTGTTCGATTATGTCAGACGATCAAGGCTTTGGTTGTGGAGAAG
CAAGGGGTCCAAAAATATGGTAAACCATCCAGACAAACCCAATCAAGCTG
AACCGCGTTAAACTGGATGGAAAGTTCGGCGTAACATCAAGCAGAGAAAT
AAAGCAACAGCTCTCAGTTATGTCAACTAGTGGTCGATCTTCTCTCTAAA
TTTGTCGCACGGTGGATGAACGAGGAGCATTTTCCCGCTAACGTTACCTG
CCAAAACAAACATAACCATTCGGAGGAGGGGAAGAGAAAAATGGCCTCTC
CTCCTATGTTTCCCGCCGGATTCCCGCGCCAATTCTTGTATCCTTGTGAC
ATTTCCCCTCTACGTACACCGTACAGTTTTCGTCAAAAAAAGTACCGTGA
GATGGATGATACTTTGGGGACATGAGTGTTTGGAAGTGCTTTGCAGTTGC
GCTTCAGCTGACGTCCGCCGTAAAACATAAAGCACGCGTTCTGGTACAAG
GTCTAGTCGGATGGTTCACGTGGTGAACAGCTTTGGAGAGCCGTTTTGAT
CCGTCTTCGGAACCATTCGTCGGGCGGCTGTGAAATTCAACTCGGCAGAT
CGAGCGGCTTGTCGCAGATCTGGACCGCTCGAGAAACCAAAGCATGGAAA
TCGAAGAACAGGTAGGGAGGGGGTCGACCGATTTCAACGTACCACATCGC
AGGTGGACGCTTCCCCCCTCAGACAATGTACCCGATGGATGAGGCATTGT
GCGCACCTTGCCAAGGTCAAAATTCCGACAAGGCCGTGATACAAGGTCGT
TAGGTTACGACCTTGTGGGCCTTTTGACCTTGGCAAGGTGTCGCGATGCC
TCGTCCATCGGGTACGTTGTCTGAGGGGGGGAGCGTCCACCCGTGATCCT
ATTTTCGAGAACTTTTTCTTTTCTCATCTTGTTTTCCCAACAACACGTTT
CTTCGGAACGGGTGAACTCGAAATGGGGGCGCCCCAGCAGTAGTGATGCA
ATCAACCCCCCGAATCGAAATCCCCATCCCACCAATCAAAACGTCCGATA
GGGTCAGCATGTCCGGCGGACCTTTTCTATGTTTGAAAAGCCTTGCATCT
TGTTGCGACGTCAGAAGTCTTTCCCTCTGTACGGCTCGGGGTGTTACCGA
GCTGCTGTGAGGAGATCAGCAATTTCAGCGCATATTTTACAAGGAACAGC
ACTAACACAACCACACAGGCGAGTAAGGCGTCGGAGCATCTAGCGGCACT
TCGGGAGGAACTAGCCTCTAAAGAAAGCCTCCTGCGGGAGGTGGAGAAAG
AACTTAGCAACCTTCGCGACGCCGTCCACTCCGAGAGGGCCTCGCGAGAG
CTGGCGGATCACAACTTGGCGGCCCTGCGGAGAAAGGCGGCTGAGGAGAG
GGCCTGGGTCGGGCAGACCAAGGAGAAACTGGAGACGGAGAAGGCGGCGC
GGCGGCACTCGGAGTCGCAGGTGTAGATATGATACGGTTCGTTTCTATAG
TGCATGAAGTATTGTCTGGTGTCTGTTTCGAGGATGATGCCCACCACAAC
CAGTGGCGGATAAGAAACCAGGAAACATGTAAACTCTACTAGGCGAGAGA
GGATGGTACAATCAGAAATGGGAGCGCATGAGGGATATATATATATATCA
TATATATATATATATATGATTCGGGCAGGCAAGGGGCGGGCCGGTGACGA
TTGCGACGGTCTTCAAGAGACGGCGAGCCGTCCCTTCGAAATCGCAGACA
AGGTTATTTCGCTTGAACCCATGGCGACATTTCTGCAATAATGCCCGAAA
CCATCTGGTGACTGATCAACGACGGCCACATCTATCTCAACATCTCAACA
TCCACCCGGGAGGAAAACGAGCGGAAAAAAAATGACACCGTATGTCCCAA
AGTGTACTAAAGTCCTACCGCATGCCAAGTTCCTTGTCCTTTTCACAATG
ACCTCGGACTGAAAAAAACCCCGACTACAGCTACCCTTGATGGCATTCGT
TCCCCCTCCCCACGCCCTCCTGGCCCCCCTGTCCATCAACGGCAAGGCGG
CGGCCGCCGACTTGACGCACCGAAGGGCCTTGAAGGCCGCCCTCAACAAC
TGCATCCGCCTGTGCGTCGTCGCGCCTACCGTCAACATTAACCTCGGCGA
TCGGAGCCGCTCCTTCTGCTCCGGTCTTCCGGAGGAAAGGATACGAGCCT
TCGTTGAAGGGTCGGTACTGCCGCGCTTCACCCGCGTCCTCCTGCAGCCA
GGGTCGGAAGGAGGCTCGACGTCATTGCCGTCGTCGTCAAACAACAATGT
CACCTGTGGCGGCGGCGGCGGCAGGACATCTATCGAGGCTGCTAGAAATA
TCGTTACTCCTACATCCAGGGTAAGATCCTCACCCTCGCGTTGCAGCAGC
AGCAGCAGCAGCAGCAGCAGCAAAGTGAAAATTGCAGCAGCATCTCCAGC
AATGGGGCTCACGGCGGCGGCGGCGATTGACGATCCTGCCGCGGACCAGC
ATTGTTCGGCACAAAGTGATGATGAATACGAGGGCGGCGGCGGCGGGAGC
GAGGGCACTGCGGACAGCTTCGAGGGTAGTAGACAGGGGCAGGGCGACTT
TGACAAGTGGCTTCCGGGACCTGCTCGTCGACATGCAAACGTCGATCGAG
AGGCATGTAGCATGCGTTTTCCAGACGCATACGGCGGCGTCTGGTGCTAG
CGGCAGCAGTATTAGCGGCGGCGGAGGTGCCTTGAGCTTGAGGCGA
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Coding sequence (CDS) from alignment at P-lacustris_contig1104:44710..52405-

>mRNA_P-lacustris_contig1104.876.1 ID=mRNA_P-lacustris_contig1104.876.1|Name=mRNA_P-lacustris_contig1104.876.1|organism=Pleurocladia lacustris SAG_25_93|type=CDS|length=4866bp|location=Sequence derived from alignment at P-lacustris_contig1104:44710..52405- (Pleurocladia lacustris SAG_25_93)
ATGTTGTCTTCGACTAGTGATCAACACCATCGGGAGCCAAGGCGGGTCAA
GGGTGGTAGCGCTCGTGGTGAATCATTTCGGGTCAGCACCAGTAACGACA
GACCCAAATGGACGTCCTCGCGCGAAGGGCTCTCTAACTCTGCGAGTATG
CCTTCGGGAGTGAGTCAGGCTCGCCCGGAAAAGGTGATTTCTACCTCACC
CCAGCAGCAGCACAAGACCAGAGCCCATCAAAACACCATCAAGGCCTGGC
GGAATGACCCCAGTCATGTCGTGAATGAAACCACAGCGACGATCATAGCC
CGCAGGCAGTCGCTAGAAAGCTCCCAATCCCAAGCGAGGGCTCCTGCCGT
AAAATCCTTGGGAAGGAGTAGCACTTGTACCACGGAGACATTCAGCAACG
CCGGTAGTGGTATTAATGGTAGCAGAGGCATCAGTAGCGCAGTGTCTGTT
GCAACGAGCAGCGATCCTGAGGTGTTGCACGAAGAAATCCAACGGCTGCA
AGCGGCGCTTATGAACGAGTTCAAGGGAGGGAACCGTTTCGTGGGCGGCG
CTCAGTTCAAAGCCTCAAGTGCCGGTCGAAATCGTCACCATGGTGGTGGC
GCTGGGGGGGCCTGCGGCGAGTGCCTGCAGATGTTGTCTTCGACTAGTGA
TCAACACCATCGGGAGCCAAGGCGGGTCAAGGGTGGTAGCGCTCGTGGTG
AATCATTTCGGGTCAGCACCAGTAACGACAGACCCAAATGGACGTCCTCG
CGCGAAGGGCTCTCTAACTCTGCGAGTATGCCTTCGGGAGTGAGTCAGGC
TCGCCCGGAAAAGGTGATTTCTACCTCACCCCAGCAGCAGCACAAGACCA
GAGCCCATCAAAACACCATCAAGGCCTGGCGGAATGACCCCAGTCATGTC
GTGAATGAAACCACAGCGACGATCATAGCCCGCAGGCAGTCGCTAGAAAG
CTCCCAATCCCAAGCGAGGGCTCCTGCCGTAAAATCCTTGGGAAGGAGTA
GCACTTGTACCACGGAGACATTCAGCAACGCCGGTAGTGGTATTAATGGT
AGCAGAGGCATCAGTAGCGCAGTGTCTGTTGCAACGAGCAGCGATCCTGA
GGTGTTGCACGAAGAAATCCAACGGCTGCAAGCGGCGCTTATGAACGAGT
TCAAGGGAGGGAACCGTTTCGTGGGCGGCGCTCAGTTCAAAGCCTCAAGT
GCCGGTCGAAATCGTCACCATGGTGGTGGCGCTGGGGGGGCCTGCGGCGA
GTGCCTGCAGGTGCGAGAAGCGCTGCGTCGGTCCCGGCTGGAGAGCCGGG
AGCTGAGGGGATCGCTTTTCCGGGCCGGGGAAGTCATCAAGCAGCTGAAA
TTGGCCGAAGCTCTCCGGCGACGAAAGGCGAACCACGGTAGCAGCGGTCG
CTCGAGACGGCAGGGGCTACTGTCGGCATCATCGGCAGCAGCATCGAACG
AAAGCAGCAGAAGGTTGGTATCGTTCCTGCTGGCTACCAGCGTCGGCAGC
GACGGTGAAACAGGAGGAGTAGGATCGAGCAGGTTGGAACAAGGTGCTGC
TGATGCTGATGCTGATGAGACTGTTGGAACGCCGTCTCGAGGCAGTCTGC
TGAAGAGGGTACAGAAGCTTGAGCGCGAGCTTCGTCTGGCCGATTTTCGG
AACACGAGGAGCATGGGGGCAGTCGCGGGAGCAGAGCACGGTCGGGCACG
GAAAAATGGCGTGTACGATGAGGTGATAGAAAATATATTTACTATGGTGC
GAGAAGCGCTGCGTCGGTCCCGGCTGGAGAGCCGGGAGCTGAGGGGATCG
CTTTTCCGGGCCGGGGAAGTCATCAAGCAGCTGAAATTGGCCGAAGCTCT
CCGGCGACGAAAGGCGAACCACGGTAGCAGCGGTCGCTCGAGACGGCAGG
GGCTACTGTCGGCATCATCGGCAGCAGCATCGAACGAAAGCAGCAGAAGG
TTGGTATCGTTCCTGCTGGCTACCAGCGTCGGCAGCGACGGTGAAACAGG
AGGAGTAGGATCGAGCAGGTTGGAACAAGGTGCTGCTGATGCTGATGCTG
ATGAGACTGTTGGAACGCCGTCTCGAGGCAGTCTGCTGAAGAGGGTACAG
AAGCTTGAGCGCGAGCTTCGTCTGGCCGATTTTCGGAACACGAGGAGCAT
GGGGGCAGTCGCGGGAGCAGAGCACGGTCGGGCACGGAAAAATGGCGTGT
ACGATGAGGTGATAGAAAATATATTTACTATGCCACACCAACAGCAAAAA
AATGCCTCCACCGAAACCATCATCACCGACGTCCTTCAAATGGGACAGGG
GAGAACGAGAAGCGATGGCACCTGTAGTAGCAGTGTCAGGGATTGGGAGG
ATCCTCCTCCGTGTTCCAAGTGCTCTTTGCTGAACGATCGACTGCTGGGA
GAGGCGACCAAGGTTAGCGGTTTGATAACGCGGATTCAAGAATATCAGAA
CGAGCCACACCAACAGCAAAAAAATGCCTCCACCGAAACCATCATCACCG
ACGTCCTTCAAATGGGACAGGGGAGAACGAGAAGCGATGGCACCTGTAGT
AGCAGTGTCAGGGATTGGGAGGATCCTCCTCCGTGTTCCAAGTGCTCTTT
GCTGAACGATCGACTGCTGGGAGAGGCGACCAAGGTTAGCGGTTTGATAA
CGCGGATTCAAGAATATCAGAACGAGGCGGAACGGCTGCAGGAGAAGCTG
GTCGGGATGGGCAACGCGCGGGCGCAGGCTGCGGAGTTGCAGGAGAAGGT
GTACGTGCTCACGAGTCACGCGGAAGATCAGGCGCGGGCAAAGGACCTGG
AGGCGGAACGGCTGCAGGAGAAGCTGGTCGGGATGGGCAACGCGCGGGCG
CAGGCTGCGGAGTTGCAGGAGAAGGTGTACGTGCTCACGAGTCACGCGGA
AGATCAGGCGCGGGCAAAGGACCTGGAGATCGAGCGGCTTGTCGCAGATC
TGGACCGCTCGAGAAACCAAAGCATGGAAATCGAAGAACAGATCGAGCGG
CTTGTCGCAGATCTGGACCGCTCGAGAAACCAAAGCATGGAAATCGAAGA
ACAGGCGAGTAAGGCGTCGGAGCATCTAGCGGCACTTCGGGAGGAACTAG
CCTCTAAAGAAAGCCTCCTGCGGGAGGTGGAGAAAGAACTTAGCAACCTT
CGCGACGCCGTCCACTCCGAGAGGGCCTCGCGAGAGCTGGCGGATCACAA
CTTGGCGGCCCTGCGGAGAAAGGCGGCTGAGGAGAGGGCCTGGGTCGGGC
AGACCAAGGAGAAACTGGAGACGGAGAAGGCGGCGCGGCGGCACTCGGAG
TCGCAGGCGAGTAAGGCGTCGGAGCATCTAGCGGCACTTCGGGAGGAACT
AGCCTCTAAAGAAAGCCTCCTGCGGGAGGTGGAGAAAGAACTTAGCAACC
TTCGCGACGCCGTCCACTCCGAGAGGGCCTCGCGAGAGCTGGCGGATCAC
AACTTGGCGGCCCTGCGGAGAAAGGCGGCTGAGGAGAGGGCCTGGGTCGG
GCAGACCAAGGAGAAACTGGAGACGGAGAAGGCGGCGCGGCGGCACTCGG
AGTCGCAGGCGGCGGCCGCCGACTTGACGCACCGAAGGGCCTTGAAGGCC
GCCCTCAACAACTGCATCCGCCTGTGCGTCGTCGCGCCTACCGTCAACAT
TAACCTCGGCGATCGGAGCCGCTCCTTCTGCTCCGGTCTTCCGGAGGAAA
GGATACGAGCCTTCGTTGAAGGGTCGGTACTGCCGCGCTTCACCCGCGTC
CTCCTGCAGCCAGGGTCGGAAGGAGGCTCGACGTCATTGCCGTCGTCGTC
AAACAACAATGTCACCTGTGGCGGCGGCGGCGGCAGGACATCTATCGAGG
CTGCTAGAAATATCGTTACTCCTACATCCAGGGTAAGATCCTCACCCTCG
CGTTGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAAAGTGAAAATTGCAGC
AGCATCTCCAGCAATGGGGCTCACGGCGGCGGCGGCGATTGACGATCCTG
CCGCGGACCAGCATTGTTCGGCACAAAGTGATGATGAATACGAGGGCGGC
GGCGGCGGGAGCGAGGGCACTGCGGACAGCTTCGAGGGTAGTAGACAGGG
GCAGGGCGACTTTGACAAGTGGCTTCCGGGACCTGCTCGTCGACATGCAA
ACGTCGATCGAGAGGCATGTAGCATGCGTTTTCCAGACGCATACGGCGGC
GTCTGGTGCTAGGCGGCGGCCGCCGACTTGACGCACCGAAGGGCCTTGAA
GGCCGCCCTCAACAACTGCATCCGCCTGTGCGTCGTCGCGCCTACCGTCA
ACATTAACCTCGGCGATCGGAGCCGCTCCTTCTGCTCCGGTCTTCCGGAG
GAAAGGATACGAGCCTTCGTTGAAGGGTCGGTACTGCCGCGCTTCACCCG
CGTCCTCCTGCAGCCAGGGTCGGAAGGAGGCTCGACGTCATTGCCGTCGT
CGTCAAACAACAATGTCACCTGTGGCGGCGGCGGCGGCAGGACATCTATC
GAGGCTGCTAGAAATATCGTTACTCCTACATCCAGGGTAAGATCCTCACC
CTCGCGTTGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAAAGTGAAAATTG
CAGCAGCATCTCCAGCAATGGGGCTCACGGCGGCGGCGGCGATTGACGAT
CCTGCCGCGGACCAGCATTGTTCGGCACAAAGTGATGATGAATACGAGGG
CGGCGGCGGCGGGAGCGAGGGCACTGCGGACAGCTTCGAGGGTAGTAGAC
AGGGGCAGGGCGACTTTGACAAGTGGCTTCCGGGACCTGCTCGTCGACAT
GCAAACGTCGATCGAGAGGCATGTAGCATGCGTTTTCCAGACGCATACGG
CGGCGTCTGGTGCTAG
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