mRNA_P-lacustris_contig1101.860.1 (mRNA) Pleurocladia lacustris SAG_25_93
|
Overview
Homology
BLAST of mRNA_P-lacustris_contig1101.860.1 vs. uniprot
Match: D7FKS5_ECTSI (WD repeat, SAM and U-box domain containing 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKS5_ECTSI) HSP 1 Score: 923 bits (2386), Expect = 0.000e+0 Identity = 511/608 (84.05%), Postives = 540/608 (88.82%), Query Frame = 1
Query: 247 VRGSALRDEFSCPITRELMRDPVIAADGHTYDREAIEMWLRNHDTSPKTGQPMEQLSLVPNLNLKRLIKDLLNEGGEGLYMYRVDSXXXXXXXXXXXXXXXXXXXXXXXXXRRERQGNREYRFALVAEQILVLKCLGPTDSDWNDKSFRVTERGCVGGRKQPAMLAGADFMQFSDATVSRRHFGIVFDKEEKHFSLCDFGSAGGTFVRLASGVPTPLYPGMMIMLGKHQLEVTNVTTDD-EINAVGADGASIASNDKGGDAVSRARPPRPGDN-SAAMRTRSKAGGNASGVKEGATTDQEESGG--GQRDRGRPTSAHSAKSSSS-KVEEEVSVLRIGGGMTEADGLSSVGDGPNGVLLVDSTEHRGRQDSSRSPLPHENAAGGEDDASVLDTPLRDKHEEGEGGASDDEKEKKMEVEGLEKSFEAGVKLARGHRRVCLECFAPEGTPIQASTHGRFFVGRKGATLGRRQTNTIAFSHESGGTVMGIDASISGEHARIVYDEDGDFLHIMDGTPTKASTNGTWFRLSGMHKESRPYPLSNGSEILIGTVRFSVTLETMVVEKELTADNRNHFISLAKEQGHRSSPLWGASRESNGPVGRDEMDSMSGR 2055
VRGSALRDEFSCPITRELMRDPVIAADGHTYDREAIEMWLRNHDTSPKTGQPMEQLSLVPNLNL+RLIKDLL EGGEGLY+YRVDS XXXXXXXXXXXXXXXXXXX RE++GNREYRFALV EQILVLKCLGPTDSDWNDKSFRVTERGCVGGRKQPAMLAGADFMQFSDATVSRRHFGI+FDKEEK FSLCDFGSAGGTFVRLASGVPTPLYP MMIMLGKHQLE+TN +D ++ AV ADGASIA+ DKGGD SR+RP RPGDN SAA R+R AG VKEGATTDQEESGG GQR+R RPTSA SAKSSSS KVEEE+SVLRIGG T ADG+SS GDGP G LL+DS EHR RQDSSRSPLPHENAAGGEDDASVLDTPL+DKH EGEGGAS DEKE +EGLE+SFEAG+KLARGHRRVCLECFAPEGTPIQ S RFFVGR+GATLGRRQTNTIAFSHESGGTVMGIDASISGEHARIVYDE+GDFLHIMDGTPTK STNGTWFRLSGMH ESRPYPLSNG+EILIGTVRFSVTLE+MVVEKELT DNRNHF+SLAK+Q RSSP WGA R+S GR + + SGR
Sbjct: 8 VRGSALRDEFSCPITRELMRDPVIAADGHTYDREAIEMWLRNHDTSPKTGQPMEQLSLVPNLNLRRLIKDLLAEGGEGLYVYRVDSDEEGXXXXXXXXXXXXXXXXXXXG--REKEGNREYRFALVTEQILVLKCLGPTDSDWNDKSFRVTERGCVGGRKQPAMLAGADFMQFSDATVSRRHFGIIFDKEEKQFSLCDFGSAGGTFVRLASGVPTPLYPSMMIMLGKHQLEITNACPEDVDVKAVDADGASIAAEDKGGDDASRSRPSRPGDNASAAARSRGTAG-----VKEGATTDQEESGGRGGQRERARPTSAQSAKSSSSSKVEEELSVLRIGGAGTGADGVSSAGDGPAGGLLLDSVEHRVRQDSSRSPLPHENAAGGEDDASVLDTPLQDKHGEGEGGASGDEKE----LEGLERSFEAGLKLARGHRRVCLECFAPEGTPIQGS---RFFVGREGATLGRRQTNTIAFSHESGGTVMGIDASISGEHARIVYDEEGDFLHIMDGTPTKPSTNGTWFRLSGMHTESRPYPLSNGAEILIGTVRFSVTLESMVVEKELTVDNRNHFMSLAKDQDRRSSPPWGAGRQSGSRGGRVDQANRSGR 601
BLAST of mRNA_P-lacustris_contig1101.860.1 vs. uniprot
Match: A0A6H5KH40_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH40_9PHAE) HSP 1 Score: 637 bits (1644), Expect = 1.590e-219 Identity = 375/516 (72.67%), Postives = 401/516 (77.71%), Query Frame = 1
Query: 382 SPKTGQPMEQLSLVPNLNLKRLIKDLLNEGGEGLYMYRVDSXXXXXXXXXXXXXXXXXXXXXXXXXRRERQGNREYRFALVAEQILVLKCLGPTDSDWNDKSFRVTERGCVGGRKQPAMLAGADFMQFSDATVSRRHFGIVFDKEEKHFSLCDFGSAGGTFVRLASGVPTPLYPGMMIMLGKHQLEVTNVTTDD-EINAVGADGASIASNDKGGDAVSRARPPRPGD-NSAAMRTRSKAGGNA-----------SGVKEGATTDQEESGG--GQRDRGRPTSAHSAKSSSSKVEEEVSVLRIGGGMTEADGLSSVGDGPNGVLLVDSTEHRGRQDSSRSPLPHENAAGGEDDASVLDTPLRDKHEEGEGGASDDEKEKKMEVEGLEKSFEAGVKLARGHRRVCLECFAPEGTPIQASTHGRFFVGRKGATLGRRQTNTIAFSHESGGTVMGIDASISGEHARIVYDEDGDFLHIMDGTPTKASTNGTWFRLSGMHKESRPYPLSNGSEILIGTVRF 1884
S +TGQPMEQLSLVPNLNL+RLIKDLL EGGEGLY+YRV+S XXXXXXXXXXXXXXX RE++G+REYRFALV EQILVLKCLGPTDSDWNDKSFRVTERGCVGGRKQPAML GADFMQFSDATVSRRHFGI+FDKEEK FSLCDFGSAGGTFVRLASGVPTPLYP MMIMLGKHQLE+TN +D ++ AV ADGASIA+ DKGGD SR+RP RPGD SAA R+R A +GVKEGATTDQEESGG GQR+R RPTSA SAKSSSSKVEEE+SVLRIGG T A+G+SS GDGP G LL+DS EHR RQDSSRSPLPHENAAGGEDDASVLDTPL+DK V L C + RFFVGR+GATLGRRQTNTIAFSHESGGTVMGIDASISGEHARIVYDE+GDFLHIMDGTPTK STNGTWFRLSGMH ESRPYPLSNG+EILIGTVR
Sbjct: 15 SSQTGQPMEQLSLVPNLNLRRLIKDLLAEGGEGLYVYRVESDEEGDGPXXXXXXXXXXXXXXXG---REKEGDREYRFALVTEQILVLKCLGPTDSDWNDKSFRVTERGCVGGRKQPAMLDGADFMQFSDATVSRRHFGIIFDKEEKQFSLCDFGSAGGTFVRLASGVPTPLYPSMMIMLGKHQLEITNACPEDVDVKAVDADGASIAAEDKGGDNASRSRPSRPGDIASAAARSRGTAXXXXXXXXXXXXXXXAGVKEGATTDQEESGGRGGQRERARPTSAQSAKSSSSKVEEELSVLRIGGTGTGAEGVSSAGDGPAGGLLLDSMEHRVRQDSSRSPLPHENAAGGEDDASVLDTPLQDK--------------------------------------VLLFC----------GSGSRFFVGREGATLGRRQTNTIAFSHESGGTVMGIDASISGEHARIVYDEEGDFLHIMDGTPTKPSTNGTWFRLSGMHTESRPYPLSNGAEILIGTVRI 479
BLAST of mRNA_P-lacustris_contig1101.860.1 vs. uniprot
Match: A0A835Z8M7_9STRA (WD repeat, SAM and U-box domain-containing 1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8M7_9STRA) HSP 1 Score: 459 bits (1180), Expect = 8.000e-150 Identity = 280/569 (49.21%), Postives = 330/569 (58.00%), Query Frame = 1
Query: 247 VRGSALRDEFSCPITRELMRDPVIAADGHTYDREAIEMWLRNHDTSPKTGQPMEQLSLVPNLNLKRLIKDLLNEGGEGLYMYRVDSXXXXXXXXXXXXXXXXXXXXXXXXXRRERQGNREYRFALVAEQILVLKCLGPTDSDWNDKSFRVTERGCVGGRKQPAMLAGADFMQFSDATVSRRHFGIVFDKEEKHFSLCDFGSAGGTFVRLASGVPTPLYPGMMIMLGKHQLEVTNVTTDDEINAVGADGASIASNDKGGDAVSRARPPR------PGDNSAAMRTRSKAGGNASGVKEGATTDQEESGGGQRDRGRPTSAHSAKSSSSKVEEEVSVLRIGGGMTEADGLSSVGDGPNGVLLVDSTEHRGRQDSSRSPLPHENAAGGEDDASVLDTP----LRDKHEEGEGGASDDEKEKKMEVEGLEKSFEAGVKLARGHRRVCLECFAPEGTPIQASTHGRFFVGRKGATLGRRQTNTIAFSHESGGTVMGIDASISGEHARIVYDEDGDFLHIMDGTPTKASTNGTWFRLSGMHKESRPYPLSNGSEILIGTVRFSVTLETMVVEKEL 1923
V+G LRDEF+CPITRELMRDPVIAADGHTYDREAIEMWLR HDTSPK GQPM+ L LVPN NLKRLIKDL+ EGGEGLY+ + + YRFALV E +L+LKCLGP +SDWN K+FRVTERGCVGGRK PA L GADFM FSDATVSR+HF + FDK +K F + D GSAGGTFVR+ GVP PLYPG+MIMLGKHQL VT GD + PPR P D+ M SK D RP++ V + GG G DG G + ++T H G D++ L E A GG DD SV DTP + ++G A D+ E+ ++E KLARGHR + LECFAPEGTPIQ ++ VGR GATLGR+Q+N+IAFSH + G +MGID+SISGEHAR+ Y D L ++DGTP K STNGTWFRLS MH S P+ L +G E+L+GTVRFS E MVVE EL
Sbjct: 8 VKGHRLRDEFACPITRELMRDPVIAADGHTYDREAIEMWLRTHDTSPKAGQPMDHLFLVPNHNLKRLIKDLIYEGGEGLYVKEEGADCGP---------------------------DAPYRFALVPEHVLILKCLGPVESDWNGKTFRVTERGCVGGRKMPAELHGADFMHFSDATVSRKHFEVFFDKTDKCFKIRDEGSAGGTFVRVPYGVPKPLYPGLMIMLGKHQLLVTEPNR--------------------GDKQAPRLPPRSEPDVLPDDSGVDMAADSK------------------------DGSRPSTP---------------VCQSMGGK---GGRLRGEDGTGGGHVANAT-HMGGLDAA---LAVEEAPGGADDDSVADTPSPAMAAESKDDGAAMAMDEGDERSFGA-----AYEVEAKLARGHRALHLECFAPEGTPIQGR---QYAVGRDGATLGRKQSNSIAFSHMANGQLMGIDSSISGEHARVEYSAARDCLLVLDGTPAKPSTNGTWFRLSQMHARSAPHALRDGMELLVGTVRFSAAHEMMVVEVEL 475
BLAST of mRNA_P-lacustris_contig1101.860.1 vs. uniprot
Match: D7FNJ7_ECTSI (Armadillo/beta-catenin repeat family protein / U-box domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNJ7_ECTSI) HSP 1 Score: 484 bits (1245), Expect = 4.490e-148 Identity = 307/605 (50.74%), Postives = 353/605 (58.35%), Query Frame = 1
Query: 100 QEGVVDASHLCRLRYCRMCPPSAGTMGCSHLFNFLVLLSYPILSYLTRKVRGSALRDEFSCPITRELMRDPVIAADGHTYDREAIEMWLRNHDTSPKTGQPMEQLSLVPNLNLKRLIKDLLNEGGEGLYMYRVDSXXXXXXXXXXXXXXXXXXXXXXXXXRRERQG-NREYRFALVAEQILVLKCLGPTDSDWNDKSFRVTERGCVGGRKQPAMLAGADFMQFSDATVSRRHFGIVFDKEEKHFSLCDFGSAGGTFVRLASGVPTPLYPGMMIMLGKHQLEVTNVT-TDDEINAVGADGASIASNDKGGDAVSRARPPRPGDNSA-AMRTRSKAG---GNASGVKEGATTDQEESGGGQRDRGRPTSAHSAKSSSSKVEEEVSVLRIGGGMTEADGLSSVGDGPNGVLLVDSTEHRGRQDSSRSPLPHENAAGGEDDASVLDTPLRDKHEEGEGGASDDEKEKKMEVEGLEKSFEAGVKLARGHRRVCLECFAPEGTPIQASTHGRFFVGRKGATLGRRQTNTIAFSHESGGTVMGIDASISGEHARIVYDEDGDFLHIMDGTPTKASTNGTWFRLSGMHKESRPYPLSNGSEILIGTVRFSVTL 1896
Q V +A LCR + +G + L L+ L +++ G LRD F+CPIT ELMRDPV+ DGHTYDREAIEMWLR + TSPKTG+P+E+L LVPNLNL+RLIKD L EGGE LY+ D R G +RE RFALV EQILVLKCLG N +SFRVTERGCVGGR QP LAGA+F+Q SDATVS+RHFGI FDKE+K FSL D GSAGGTFVRL GV T LYPGM+I+LG+HQLEV +V+ TD E AV D A DKG +A S + P PG++S+ A R R A G+A+ V +G TTD GG+R+ P S AKSSSSK +HEEGEGG SDDEKE EAG K R + RVCLECFAPEGTPIQ RFFVGR+GATLG R+TNTIAFS+ESGGTVMGID ISG HARIVYD+ G F HI DG K+S NGTW RLSG H ESRPYPLS+G+EILIGTV FSVTL
Sbjct: 994 QGNVKEAKRLCRAALHTL--DGENPLGRPQVAAVLATLA----DLLGKEMHGFTLRDAFACPITGELMRDPVVVEDGHTYDREAIEMWLRKYGTSPKTGEPIERLLLVPNLNLRRLIKDFLIEGGEELYVGGRDGDGGDQDDGSGEVDRDEGDGGESGWEERSGTGEHRECRFALVTEQILVLKCLGSVYPGGNIESFRVTERGCVGGRNQPNTLAGAEFVQISDATVSKRHFGIAFDKEDKLFSLRDLGSAGGTFVRLELGVSTLLYPGMIILLGRHQLEVIDVSSTDSEAKAVEGDRNPFAVGDKGSNATSPSSPSAPGNSSSTAARRRGMACSIVGSAAIVNKGPTTD-----GGEREPRHPISPQPAKSSSSK----------------------------------------------------------------------QHEEGEGGISDDEKE-----------LEAGAKPGRRNPRVCLECFAPEGTPIQGK---RFFVGREGATLGGRKTNTIAFSYESGGTVMGIDDFISGVHARIVYDDGGGFFHITDGNSFKSSKNGTWVRLSGKHTESRPYPLSHGTEILIGTVPFSVTL 1503
BLAST of mRNA_P-lacustris_contig1101.860.1 vs. uniprot
Match: A0A7S2NWM2_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2NWM2_9STRA) HSP 1 Score: 307 bits (786), Expect = 1.820e-90 Identity = 213/597 (35.68%), Postives = 300/597 (50.25%), Query Frame = 1
Query: 256 SALRDEFSCPITRELMRDPVIAADGHTYDREAIEMWL------RNHDTSPKTGQPMEQLSLVPNLNLKRLIKDLLNEG-GEGLYMYRVDSXXXXXXXXXXXXXXXXXXXXXXXXXR---------------RERQGNREYRFALVAEQILVLKCLGPTDSDWNDKSFRVTERGCVGGRKQPAMLAGAD--------FMQFSDATVSRRHFGIVFDKEEKHFSLCDFGSAGGTFVRLASGVPTPLYPGMMIMLGKHQL-----EVTNVTTDDEINAVGADGASIASN-DKGGDAVSRARPPRPG-DNSAAMRTRSKAGGNASGVKEGATTDQEESGGGQRDRGRPTSA---HSAKSSSSKVEEEVSVLRIGGGMTEADGLSSVGDGPNGVLLVDSTEHRGRQDSSRSPLPHENAAGGEDDASVLDTPLRDKHEEGEGGASDDEKEKKMEVEGLEKSFEAGVKLARGHRRVCLECFAPEGTPIQASTHGRFFVGRKGATLGRRQTNTIAFSHESGGTVMGIDASISGEHARIVYDEDGDFLHIMDGTPT-KASTNGTWFRLSGMHKESRPYPLSNGSEILIGTVRFSVTLETMVVEKEL 1923
S LRDEF+CPITRE++ +PVIAADGHTYD+ AIE W+ R TSPKTG+ +E L L+PN NLKRL++D+L EG G+ LY D+ N + ALV E++L LKCLGP +S+WN++SF+VTE GC+GGR++P + A F+QF++ATVSRRHF I +DK + F + D GSAGGTFVR+ G + PG MIM+GKHQL E+++ + G ++ + D+ ++ PG D S+ +A + DQEE +P A H E + ++L+ + GD D R D + + + A E++ V + L D + ++ + G + L CFAPEGTPIQ + + + + GATLGR+Q+NTI+FSHE G +GID+S+SGEHA + Y+E+ + DG K STNGTW RLSGMHKES Y ++N +E+L GTVRF V+++ VVE+EL
Sbjct: 23 SKLRDEFTCPITREIISEPVIAADGHTYDKSAIEQWIHFMQNKRMKPTSPKTGEELEHLHLIPNHNLKRLLRDMLVEGRGDALYQPDADAMAKQQENASSSDKDAQSYNCDNVSSXXXXXXXXXVQTTVMANASASNSKGGMALVREKVLNLKCLGPNESEWNNRSFKVTESGCIGGRRRPTVTAEKQNDRLKQLHFIQFTEATVSRRHFEICYDKNVEEFRIRDLGSAGGTFVRIPPGKSHVMAPGTMIMVGKHQLVAEKFELSSAAAAAHQEEIAGSGDAVVGDVDEDVQRLNDRSSTSPGPDQXXXXXXXSQMSASALTPRNDVAEDQEE---------KPMEAAQHHYQHLMDHNEETDCNILQWADMQKAPSNEGTAGD--------DCVSVRSSVDCDQDSM---SVASAENNLPVTQS-LVDSNS----------------------NYVSATNSVNGPPVLMLRCFAPEGTPIQ---NKEYPISKMGATLGRKQSNTISFSHEVNGNQVGIDSSVSGEHANLKYNENTKLFELSDGVGIGKCSTNGTWVRLSGMHKESGFYAIANQTELLFGTVRFQVSIDEQVVEREL 573
BLAST of mRNA_P-lacustris_contig1101.860.1 vs. uniprot
Match: A0A7S3MFD7_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MFD7_9STRA) HSP 1 Score: 267 bits (682), Expect = 1.670e-75 Identity = 214/615 (34.80%), Postives = 301/615 (48.94%), Query Frame = 1
Query: 244 KVRGSALRDEFSCPITRELMRDPVIAADGHTYDREAIEMWLRNHDTSPKTGQPMEQLSLVPNLNLKRLIKDLLNEGGEGLYMYRVDSXXXXXXXXXXXXXXXXXXXXXXXXXRRERQGNREYRFALVAEQILVLKCLGPTDSDWNDKSFRVTERGCVGGRKQPAM--LAGADFMQFSDATVSRRHFGIVFDKE----EKHFSLCDFGSAGGTFVRLASGVPTPLYPGMMIMLGKHQLEVTNVTTDDEINAVGADGASIASNDKGGDAVSRARPPRPGDNSAAMRTRSKAGGNASGVKEGATTDQEESGGGQRDRGRPTSAHSAKSSSSKV------------EEEVSVLRIGGGMTEADGLSSVGD-----GPNGVLLVDSTEHRG-------RQDSSRSPLPHE-NAAGGEDDASV-----LDTPLRDKHEEGEGGASDDEKEKKMEVEGLEKSFEAGVKLARGHRRVCLECFAPEGTPIQASTHGRFFVGRKGATLGRRQTNTIAF----SHESGGT-VMGIDASISGEHARIVYDEDGDFLHIMDGTPTKASTNGTWFRLSGMHKESRPYPLSNGSEILIGTVRFSVTLETMVVEKELTADN-RNHFISLAK 1962
+++G +RDEF CPIT ELMRDPV+A+DGHTY++ AIE WL+NH SP++G+PM+ L+ +PN+N+K+LI+D++NEGG G YM + N++ F + E+ILVL+CLGP +SDWN SF+V GC+GGRK + + + F D TVSRRHF I + F + D GSAGGTF+R+ G L+PGM+I+LGKHQ +++V DD +A G A + K VS + ++ A M A S +E ++ S+H A + V EEE + G ADG SS D G + + T++ + + R+ H+ NA E D + TP+ H G+ +G + + A RR L C AP+G+P+Q + F V ++GA +GR+ TNTI E+G VM +D +IS EHARI ++ I DGT K STNGTWFRLSG H+ES + LS G E+LIGTVRF V+ + E L + N F AK
Sbjct: 33 RLKGMKIRDEFICPITYELMRDPVVASDGHTYEKAAIEKWLKNHKISPRSGEPMDVLT-IPNINIKKLIQDIINEGGHGFYMSDIS--------------------------------NKDRMFEVRPEKILVLECLGPPESDWNSLSFQVNRFGCIGGRKHNPNDNMNNREPILFKDITVSRRHFEITNSVDIPTGGSVFHIRDLGSAGGTFIRIPHGKRKQLHPGMIILLGKHQFTISSV--DDAPSAGGQSFTGPAGSSKN---VSMRKSSL--NSEAIMSLVENAEKIISDFAGPGAAPNDELSERLKNLTMQLSSHLADDAPLTVGHDIRLTDHSLNEEERLSSPVLGRPPLADGRSSRADHKGDKGGDDDQMGSHTDNXXXXXXXXPKLTTMRTASAHDMNALHYEPDVDFDADAKMTTPMTHAHTGGD-------------AKGGFQRYTA--------RRCTLTCCAPDGSPLQGHS---FIVDKEGAMMGRKATNTIPLLMKIEMENGEERVMNVDTAISSEHARIEFEPATGQFFICDGTVDKPSTNGTWFRLSGPHQESSSHVLSAGVEVLIGTVRFLVSESMTISEHGLDSKGISNSFSEAAK 583
BLAST of mRNA_P-lacustris_contig1101.860.1 vs. uniprot
Match: A0A7S1XUU4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XUU4_9STRA) HSP 1 Score: 238 bits (606), Expect = 1.760e-68 Identity = 116/236 (49.15%), Postives = 148/236 (62.71%), Query Frame = 1
Query: 247 VRGSALRDEFSCPITRELMRDPVIAADGHTYDREAIEMWLRNHDTSPKTGQPMEQLSLVPNLNLKRLIKDLLNEGGEGLYMYRVDSXXXXXXXXXXXXXXXXXXXXXXXXXRRERQGNREYRFALVAEQILVLKCLGPTDSDWNDKSFRVTERGCVGGRKQPAMLAGADFMQFSDATVSRRHFGIVFDKEEKHFSLCDFGSAGGTFVRLASGVPTPLYPGMMIMLGKHQLEVTNVT 954
VRG LRDEF CPITRELM+DPVIAADGHTYDR AIE WL NH SPKTG+ ME + L+ N+NL +LI+DL+NEGGEGLYM D YR+AL+ +++L KCLGP +S WN +SFRV G +GGR++P+ L D + FSDATVSRRHF IV + + + D GSAGGTF+R+ P++ G+M M+GKHQ+ ++T
Sbjct: 44 VRGGQLRDEFVCPITRELMKDPVIAADGHTYDRSAIEQWLLNHRRSPKTGEVMESVGLIRNINLLKLIRDLVNEGGEGLYMAESDKASENKSLPGG------------------------YRYALLRQKVLTFKCLGPAESSWNGRSFRVFANGVLGGRRRPSKLTERDHVTFSDATVSRRHFEIVHSTADSRYYIRDIGSAGGTFLRIQMNEKIPVFHGLMFMVGKHQMSARDLT 255
BLAST of mRNA_P-lacustris_contig1101.860.1 vs. uniprot
Match: W7U452_9STRA (SMAD/FHA domain protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U452_9STRA) HSP 1 Score: 221 bits (562), Expect = 2.580e-59 Identity = 197/638 (30.88%), Postives = 269/638 (42.16%), Query Frame = 1
Query: 247 VRGSALRDEFSCPITRELMRDPVIAADGHTYDREAIEMWLRNHDTSPKTGQPMEQLSLVPNLNLKRLIKDLLNEGGEGLYMYRVDSXXXXXXXXXXXXXXXXXXXXXXXXXRRERQGNREYRFALVAEQILVLKCLGPTDSDWNDKSFRVTERGCVGGRKQPAMLAGADFMQFSDATVSRRHF----GIVFDKEEKHFSLCDFGSAGGTFVRLASGVPTPLYPGMMIMLGKHQLEVTNVTTDDEINAVGADGASIASNDKGGDAVSRARPPRPGDNSAAMRTRSKAGGNASGVKEGATTDQEESGGGQRDRGRPTSAHSAKSSSSKVEEEVS------------------VLRIGGGMTEADGLSSVGDGPNGVLLVDSTEHRGRQDSSRSPLPHENAAGGEDDASVLDTPLRDKHEEGEGGASDDEKEKKMEVEGLEKSFEAGVKLARGHRR--VCLECFAPEGTPIQASTHGRFFVGRKGATLGRRQTNTIAFSHESGGTVMGIDASISGEHARIVYD-EDGDFLHIMDGTP-TKASTNGTWFRLSGMHKESRPYPLSNGSEILIGTV-RFSVTLETMVVEKEL-----------TADNRNHFISLAKEQGHRSSPLWGASRESNGPVGRDE-MDS 2043
VRG +RDEF CPIT ++ RDPV+A DG TY+R AI WL + TSP T + + LVPNLNLKRLI DL+ EGG GL + + E F L + ++VL+CLGP +SDW +S VT+ G +GGR++ + G D M F D TVSRRHF G V + F + D GSAGGT++RL L G MI++GKHQ V + + E+ P P A RT G+ A A +S+ + +S A G D RGRQ D PL ++ L++ V G + + L+CFAPEG+P+Q H F VG +GA++GR+Q+NT++ S E GG V+G+D+++SGEH RI Y E G F+ + G K STNGTW RLS +H S + EIL+G + RFSV+ ET ++E + T G S+P +E NGP+GR+E MD+
Sbjct: 9 VRGR-IRDEFQCPITAQIFRDPVVAKDGRTYERSAISKWLETNKTSPMTKEEISSADLVPNLNLKRLIYDLVAEGGHGLAAKCTTTEEL----------------------------SHETAFGL--DDVMVLRCLGPAESDWIHRSQVVTKEGILGGRRR-ILTGGKDSMVFQDTTVSRRHFEAGWGPVDETSLPSFYIQDLGSAGGTYLRLRPREIMELRDGAMILVGKHQFIVISPSRLHELQL-----------------------PAP-----ACRT-----------------------------GQSAVAFEAFHNSATIPTPLSPGAXXXXXXXXXXXFXXXXXXXXXXXXXALGTEDPNDSIXXXXXXXXXGLRGRQGQ--------------------DFPLG-----------------RLIQRYLQQPEAPLVSAGEGSEQPLLMLQCFAPEGSPMQ---HRVFAVGVEGASIGRKQSNTVSLSQEKGGEVLGLDSAVSGEHCRIEYHHEKGGFVLVDGGLGGDKPSTNGTWTRLSYIHMTSARQKVERDDEILVGGILRFSVSFETFLMESVVPPREEGAKACDTGGRDGEGAVGMMSDGEGSTPRSKQDKE-NGPIGREEPMDT 516
BLAST of mRNA_P-lacustris_contig1101.860.1 vs. uniprot
Match: A0A7R9UA93_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UA93_9STRA) HSP 1 Score: 214 bits (544), Expect = 1.570e-56 Identity = 108/230 (46.96%), Postives = 142/230 (61.74%), Query Frame = 1
Query: 247 VRGSALRDEFSCPITRELMRDPVIAADGHTYDREAIEMWLRNHDTSPKTGQPMEQLSLVPNLNLKRLIKDLLNEGGEGLYMYRVDSXXXXXXXXXXXXXXXXXXXXXXXXXRRERQGNREYRFALVAEQILVLKCLGPTDSDWNDKSFRVTERGCVGGRKQPAMLAGADFMQFSDATVSRRHFGIVFDKEEKHFSLCDFGSAGGTFVRLASGVPTPLYPGMMIMLGKHQL 936
VRG LRDE+ CPITREL+RDPV+AADGHTY+R AIE WL +H SPKT + ME +L PN+NL +LI+DL+ EGGEGLY+ Y+ AL+ +++L LKCLGP DS WN++SFRV G +GGR+ P D + F DATVSRRHF I+ ++ + F + D GSAGGTF+R+ P++PG+M M+GKHQ+
Sbjct: 52 VRGRQLRDEYVCPITRELLRDPVMAADGHTYERVAIEKWLVSHRRSPKTQKVMESNTLFPNINLLKLIRDLVAEGGEGLYVLEDTESMAEDSDMPGG-----------------------YQNALLWQKVLTLKCLGPADSSWNNRSFRVFPHGVLGGRRTPTRQTDRDHIAFGDATVSRRHFEIIQNEADFLFYIRDLGSAGGTFLRVQEKEKIPVFPGLMFMVGKHQM 258
BLAST of mRNA_P-lacustris_contig1101.860.1 vs. uniprot
Match: A0A482RTF3_9ARCH (FHA domain-containing protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RTF3_9ARCH) HSP 1 Score: 197 bits (501), Expect = 1.730e-54 Identity = 100/229 (43.67%), Postives = 143/229 (62.45%), Query Frame = 1
Query: 238 TRKVRGSALRDEFSCPITRELMRDPVIAADGHTYDREAIEMWLRNHDTSPKTGQPMEQLSLVPNLNLKRLIKDLLNEGGEGLYMYRVDSXXXXXXXXXXXXXXXXXXXXXXXXXRRERQGNREYRFALVAEQILVLKCLGPTDSDWNDKSFRVTERGCVGGRKQ-PAMLAGA-DFMQFSDATVSRRHFGIVFDKEEKHFSLCDFGSAGGTFVRLASGVPTPLYPGMMIM 918
++ +RG +RDEF CPIT ELMR+PV+A+DGHTY++ AI+ WL+ + TSP++G+PM+ L +PN+NLK+LI+D++NEGG G Y + N++ F + E++L+L+CLGP +SDWN +SF+V + GCVGGRK P A + + F D TVSRRHF + +DK F L D GSAGGTF+R+ G L+PGM+I+
Sbjct: 15 SKVMRGMKIRDEFLCPITYELMREPVVASDGHTYEKNAIDKWLKTNHTSPRSGEPMDNLC-IPNINLKKLIQDIINEGGAGFYTSDIS--------------------------------NKDRIFEVCPEKVLILECLGPPESDWNLQSFQVNKLGCVGGRKHNPEDSANLREIVLFKDITVSRRHFEVTYDKNS--FFLRDLGSAGGTFLRIRYGAKKQLHPGMIIL 208 The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig1101.860.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-lacustris_contig1101.860.1 >prot_P-lacustris_contig1101.860.1 ID=prot_P-lacustris_contig1101.860.1|Name=mRNA_P-lacustris_contig1101.860.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=636bp MCPPSAGTMGCSHLFNFLVLLSYPILSYLTRKVRGSALRDEFSCPITRELback to top mRNA from alignment at P-lacustris_contig1101:51859..58845- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-lacustris_contig1101.860.1 ID=mRNA_P-lacustris_contig1101.860.1|Name=mRNA_P-lacustris_contig1101.860.1|organism=Pleurocladia lacustris SAG_25_93|type=mRNA|length=6987bp|location=Sequence derived from alignment at P-lacustris_contig1101:51859..58845- (Pleurocladia lacustris SAG_25_93)back to top Coding sequence (CDS) from alignment at P-lacustris_contig1101:51859..58845- >mRNA_P-lacustris_contig1101.860.1 ID=mRNA_P-lacustris_contig1101.860.1|Name=mRNA_P-lacustris_contig1101.860.1|organism=Pleurocladia lacustris SAG_25_93|type=CDS|length=3816bp|location=Sequence derived from alignment at P-lacustris_contig1101:51859..58845- (Pleurocladia lacustris SAG_25_93)back to top |