mRNA_P-lacustris_contig11.831.1 (mRNA) Pleurocladia lacustris SAG_25_93
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Overview
Homology
BLAST of mRNA_P-lacustris_contig11.831.1 vs. uniprot
Match: D8LR42_ECTSI (Ribosomal protein L3 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LR42_ECTSI) HSP 1 Score: 492 bits (1267), Expect = 6.200e-173 Identity = 259/318 (81.45%), Postives = 273/318 (85.85%), Query Frame = 1
Query: 1 ARRVLSSFARPATST-EGSSDNTPFEPDWDEGGG-------AGVGXXGGVAPMSFEAREWVPSVRRSGALAMKVGSMAIFDSWGVRHPVTVLQLDECEVVQVKTTETDGYTSVQLGVGERKLKNVNKADLGRFQQAGVSPKRKLMEFRVSPEALLPVGFQVRAQHFVAGQKVDVCGTSKGKGFQGAMKRWGFKGQGASHGVSKTHRHIGSTGQCQDPGRVFKGKKMPGRMGTNRVTVQNLKILKIDPARELLFVKGHVPGQNGGFVRVTDAIKGPAFPSDPPFPSFVA--EGGGDESSQQEIWCPQGEEDPLEIVEED 924
AR+ LSS ARPAT+T +GSSD + A G GG P S EAREW PSVRRSGALAMKVGSMAIFDSWGVRHPVTVLQLDECEVVQVKTTETDGYTS+QLGVGERK KNVNK D RF++AGV+PKRKLMEFRVS EALLPVGFQ+RAQHFVAGQKVDVCGTSKGKGFQG MKRWGFKGQ ASHGVSKT RHIGSTGQCQDPGRVFKGKKMPGRMGT+RVTVQNLKILK+DP RELLFV+GHVPGQNGGFVRVTDAIKG AFPSDPPFPSFVA EG GD+SS QEIWCPQGEEDPLEIV+ED
Sbjct: 54 ARQALSSSARPATNTADGSSDPSXXXXXXXXXXXXXXXXXXAVFGGVGG--PQSLEAREWNPSVRRSGALAMKVGSMAIFDSWGVRHPVTVLQLDECEVVQVKTTETDGYTSLQLGVGERKTKNVNKPDAERFRRAGVNPKRKLMEFRVSAEALLPVGFQLRAQHFVAGQKVDVCGTSKGKGFQGGMKRWGFKGQRASHGVSKTPRHIGSTGQCQDPGRVFKGKKMPGRMGTDRVTVQNLKILKMDPVRELLFVRGHVPGQNGGFVRVTDAIKGAAFPSDPPFPSFVAVAEGDGDDSSLQEIWCPQGEEDPLEIVDED 369
BLAST of mRNA_P-lacustris_contig11.831.1 vs. uniprot
Match: A0A835Z1M4_9STRA (Translation protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1M4_9STRA) HSP 1 Score: 311 bits (798), Expect = 1.420e-103 Identity = 158/235 (67.23%), Postives = 182/235 (77.45%), Query Frame = 1
Query: 211 IFDSWGVRHPVTVLQLDECEVVQVKTTETDGYTSVQLGVGERKLKNVNKADLGRFQQAGVSPKRKLMEFRVSPEALLPVGFQVRAQHFVAGQKVDVCGTSKGKGFQGAMKRWGFKGQGASHGVSKTHRHIGSTGQCQDPGRVFKGKKMPGRMGTNRVTVQNLKILKIDPARELLFVKGHVPGQNGGFVRVTDAIKGPAFPSDPPFPSFVA---EGGGDESSQQEIWCPQGEEDPL 906
I+D+WG RH VTVL LD C+V QV ET GYT+VQ+G GE K KNV K+ G F +AGV PKR+L EFRV+P+ALLPVGF++RAQHFV GQ +DV GT+KGKGFQG MKRW FKGQ ASHGVSKTHRHIGSTGQCQDPGRVFKGKKMPGRMG VTVQ L+ILK+D R+LLFVKGHVPG G F+RV DA+K FP+ PPFPS+ EG G+E E++ P E DPL
Sbjct: 4 IWDAWGERHAVTVLHLDACQVTQVCREETHGYTAVQVGAGEAKPKNVRKSLAGLFAKAGVPPKRRLGEFRVTPDALLPVGFRLRAQHFVPGQLIDVRGTTKGKGFQGGMKRWNFKGQRASHGVSKTHRHIGSTGQCQDPGRVFKGKKMPGRMGGTAVTVQCLRILKLDTQRDLLFVKGHVPGPRGAFLRVQDALKRAEFPAPPPFPSYAPPPHEGEGEEVPL-ELFAPVKESDPL 237
BLAST of mRNA_P-lacustris_contig11.831.1 vs. uniprot
Match: A0A8K1CEF8_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CEF8_PYTOL) HSP 1 Score: 305 bits (782), Expect = 2.790e-100 Identity = 155/263 (58.94%), Postives = 190/263 (72.24%), Query Frame = 1
Query: 133 MSFEAREWVPSVRRSGALAMKVGSMAIFDSWGVRHPVTVLQLDECEVVQVKTTETDGYTSVQLGVGERKLKNVNKADLGRFQQAGVSPKRKLMEFRVSPEALLPVGFQVRAQHFVAGQKVDVCGTSKGKGFQGAMKRWGFKGQGASHGVSKTHRHIGSTGQCQDPGRVFKGKKMPGRMGTNRVTVQNLKILKIDPARELLFVKGHVPGQNGGFVRVTDAIKGPAFPSDP-PFPSFVAEGGGDESSQQEIWCPQGEEDPLEIVE 918
+ +EW P +R+G LA+K+G M ++D +G RH TVLQ++EC+V QVKTTE G++S+QLGVG RK +NV K +G +AGV+PKR+L EFRVS +ALLP+G + AQHF GQ VDVCGTSKGKGFQG MKR F GQ ASHG SKT RH+GSTGQCQDPG+VFKGKKMPGR+G RVT NL ++K+D R LL+VKG VPG NGG VRVTDA K PS P P+P+++A G E EI PQG+ DP E
Sbjct: 43 IELAPKEWTPEKKRTGLLAVKIGMMPVWDHYGYRHACTVLQVEECQVTQVKTTERHGFSSLQLGVGIRKARNVTKPVMGHLAKAGVAPKRQLQEFRVSDDALLPLGTTLSAQHFTPGQYVDVCGTSKGKGFQGVMKRHNFAGQPASHGNSKTERHMGSTGQCQDPGKVFKGKKMPGRLGGERVTRDNLWVVKVDTQRNLLYVKGSVPGNNGGIVRVTDARK--KTPSAPLPYPTYIAAEG--EDMPAEIMAPQGDADPYHYDE 301
BLAST of mRNA_P-lacustris_contig11.831.1 vs. uniprot
Match: A0A7S2BM36_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BM36_9STRA) HSP 1 Score: 299 bits (765), Expect = 4.270e-98 Identity = 151/244 (61.89%), Postives = 180/244 (73.77%), Query Frame = 1
Query: 172 RSGALAMKVGSMAIFDSWGVRHPVTVLQLDECEVVQVKTTETDGYTSVQLGVGERKLKNVNKADLGRFQQAGVSPKRKLMEFRVSPEALLPVGFQVRAQHFVAGQKVDVCGTSKGKGFQGAMKRWGFKGQGASHGVSKTHRHIGSTGQCQDPGRVFKGKKMPGRMGTNRVTVQNLKILKIDPARELLFVKGHVPGQNGGFVRVTDAIKGPAFPSDPPFPSFVAEGGGDESSQQEIWCPQGEEDP 903
R+GAL +K G +A FD WG R +TV+QLD CEVVQVKTT+ DGY ++QLGV K KN + F ++GV KRKL EFRV+ +ALLP G ++ A HFV GQ +DVCG SKGKGFQGAMKR F GQ ASHGVSKTHR +GSTGQCQ+PGRVFKGKKMPGRMG +RVT+QNL + KID R LL+VKGHVPGQNGGF+R+ DA+KGP FPS PPF + E G + ++ P E DP
Sbjct: 24 RTGALGIKAGMLAEFDHWGTRQELTVIQLDACEVVQVKTTKNDGYAALQLGVCAGKEKNAPQTLKNHFAKSGVEVKRKLGEFRVADDALLPPGTKIGAAHFVPGQLLDVCGVSKGKGFQGAMKRHNFSGQRASHGVSKTHRAMGSTGQCQNPGRVFKGKKMPGRMGNDRVTIQNLWLYKIDVDRNLLYVKGHVPGQNGGFLRIQDAVKGPKFPSPPPF--SIPEDMGSDENRAVFHAPLSEVDP 265
BLAST of mRNA_P-lacustris_contig11.831.1 vs. uniprot
Match: A0A7S2V0H5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V0H5_9STRA) HSP 1 Score: 300 bits (769), Expect = 2.680e-97 Identity = 158/257 (61.48%), Postives = 187/257 (72.76%), Query Frame = 1
Query: 154 WVPSVRRSGALAMKVGSMAIFDSWGVRHPVTVLQLDECEVVQVKTTETDGYTSVQLGVGERKLKNVNKADLGRFQQAGVSPK-RKLMEFRVSPEALLPVGFQVRAQHFVAGQKVDVCGTSKGKGFQGAMKRWGFKGQGASHGVSKTHRHIGSTGQCQDPGRVFKGKKMPGRMGTNRVTVQNLKILKIDPARELLFVKGHVPGQNGGFVRVTDAIKGPAFPSDPPFPSFVAEGGGDESSQQEIWCPQGEEDPLEIVEE 921
W + RSG LAMKVG + ++D WGVR+P T+LQ+D C VVQVKT + DGY ++QL VGE K+ +A G + + + RKL EFRV PEAL+PVG ++ AQHFVAGQ VDVCG +KGKG QGAMK+ GFKG ASHG SK HR +GSTGQCQDPGRVFKGKKM G+MG +RVT NLKI+KI+PAR LLFV G VPG GGFVRV DAIKGP FPS PPFP+FV G + EI P G+ D LE V+E
Sbjct: 114 WGRARARSGLLAMKVGMLPVWDKWGVRYPCTILQVDNCAVVQVKTEDHDGYDALQLTVGE--AKHPQRALQGHYARHKLDTTGRKLGEFRVRPEALIPVGTKIHAQHFVAGQLVDVCGITKGKGTQGAMKKHGFKGGPASHGCSKAHRSLGSTGQCQDPGRVFKGKKMHGKMGNDRVTTSNLKIMKIEPARNLLFVHGCVPGNKGGFVRVRDAIKGPKFPSPPPFPTFVP--GEEAEYPDEILAPAGDVDLLEPVQE 366
BLAST of mRNA_P-lacustris_contig11.831.1 vs. uniprot
Match: A0A1V9ZYU3_9STRA (50S ribosomal protein L3-2 n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZYU3_9STRA) HSP 1 Score: 297 bits (760), Expect = 3.090e-97 Identity = 149/272 (54.78%), Postives = 189/272 (69.49%), Query Frame = 1
Query: 106 VGXXGGVAPMSFEAREWVPSVRRSGALAMKVGSMAIFDSWGVRHPVTVLQLDECEVVQVKTTETDGYTSVQLGVGERKLKNVNKADLGRFQQAGVSPKRKLMEFRVSPEALLPVGFQVRAQHFVAGQKVDVCGTSKGKGFQGAMKRWGFKGQGASHGVSKTHRHIGSTGQCQDPGRVFKGKKMPGRMGTNRVTVQNLKILKIDPARELLFVKGHVPGQNGGFVRVTDAIKGP-AFPSDPPFPSFVAEGGGDESSQQEIWCPQGEEDPLEIVE 918
+G ++ ++ E ++W P +R+G LA+K+G M ++D WG+ HP TVLQ++EC+V Q+K ET G++++QLG G RK KN+ K LG +AGV KR+L EFRVS +AL+P G ++ A HF GQ VDVCGTSKGKGFQG MKR F GQ ASHG SKT RH+GS+GQCQDPG+V+KGKKMPGRMG RVT NL + K+DP R LLFVKG VPG GG VRVTDA K + PPFP+F+ G ES I P+ E+DP E
Sbjct: 12 LGAPRALSSLALEPKQWTPESKRTGLLAVKMGMMHVYDDWGLAHPCTVLQVEECQVTQIKDKETHGFSAIQLGAGLRKEKNLTKPVLGHLAKAGVPAKRELQEFRVSDDALIPAGTKLNALHFAPGQYVDVCGTSKGKGFQGVMKRHNFAGQPASHGNSKTERHMGSSGQCQDPGKVWKGKKMPGRMGGKRVTRDNLWVFKVDPERNLLFVKGTVPGAPGGIVRVTDARKKKFKDAAQPPFPTFILAEG--ESLPGPIMAPKSEKDPYHFEE 281
BLAST of mRNA_P-lacustris_contig11.831.1 vs. uniprot
Match: A0A662XEF5_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XEF5_9STRA) HSP 1 Score: 296 bits (758), Expect = 1.060e-96 Identity = 155/256 (60.55%), Postives = 185/256 (72.27%), Query Frame = 1
Query: 154 WVPSVRRSGALAMKVGSMAIFDSWGVRHPVTVLQLDECEVVQVKTTETDGYTSVQLGVGERKLKNVNKADLGRFQQAGVSPKRKLMEFRVSPEALLPVGFQVRAQHFVAGQKVDVCGTSKGKGFQGAMKRWGFKGQGASHGVSKTHRHIGSTGQCQDPGRVFKGKKMPGRMGTNRVTVQNLKILKIDPARELLFVKGHVPGQNGGFVRVTDAIKGPAFPSDP-PFPSFVAEGGGDESSQQEIWCPQGEEDPLEIVE 918
W P +R+G LA+K+G M ++D +G RH TVLQ++EC+V QVKT + G+T++QLGVG RK KN+ K LG ++AGV KR+L EFRVS +ALLP+G + A HF AGQ VDVCGTSKGKGFQG MK F GQ ASHG SKTHRH+GSTGQCQDPG+V+KGKKMPGRMG NRVT NL I KID R LL+VKG VPG NGG VRVTDA K P +P P+P+F+A G QEI P G+EDP E
Sbjct: 45 WTPEKKRTGLLAVKIGMMPVWDHFGYRHNCTVLQVEECQVTQVKTADRHGFTALQLGVGVRKSKNMTKPVLGHLEKAGVPAKRQLQEFRVSEDALLPLGTTLSALHFNAGQYVDVCGTSKGKGFQGVMKLHNFAGQPASHGNSKTHRHMGSTGQCQDPGKVWKGKKMPGRMGGNRVTRDNLWIAKIDVERNLLYVKGSVPGNNGGIVRVTDARK--KVPVEPLPYPTFMAVEGA--QLPQEISAPHGDEDPYHYDE 296
BLAST of mRNA_P-lacustris_contig11.831.1 vs. uniprot
Match: A0A485LGU6_9STRA (Aste57867_21176 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LGU6_9STRA) HSP 1 Score: 295 bits (756), Expect = 1.630e-96 Identity = 151/266 (56.77%), Postives = 188/266 (70.68%), Query Frame = 1
Query: 124 VAPMSFEAREWVPSVRRSGALAMKVGSMAIFDSWGVRHPVTVLQLDECEVVQVKTTETDGYTSVQLGVGERKLKNVNKADLGRFQQAGVSPKRKLMEFRVSPEALLPVGFQVRAQHFVAGQKVDVCGTSKGKGFQGAMKRWGFKGQGASHGVSKTHRHIGSTGQCQDPGRVFKGKKMPGRMGTNRVTVQNLKILKIDPARELLFVKGHVPGQNGGFVRVTDAIKGP-AFPSDPPFPSFVAEGGGDESSQQEIWCPQGEEDPLEIVE 918
+ ++ E+++W P +R+G LA+K+GSM I+D WGV PVTVLQ++EC+V QVKT + G++S+QLGVG R+ KN+ K LG +AGV KR+L EFRVS +ALLP G + A HF GQ +DVCGTSKGKGFQG MKR F GQ ASHG S THR +GS GQCQDPG+V+KGKKMPGRMG RVT NL ILK+DP R LL+VKG VPG GG +RVTDA K A + PPFP+FV G E + P+G++DP E
Sbjct: 25 TSQVTLESKDWTPESKRTGLLAVKMGSMHIYDDWGVAQPVTVLQVEECQVTQVKTADVHGFSSLQLGVGLRREKNITKPVLGHLAKAGVPAKRELHEFRVSDDALLPAGTTLNALHFSPGQYIDVCGTSKGKGFQGVMKRHNFGGQPASHGNSLTHRAMGSAGQCQDPGKVWKGKKMPGRMGGKRVTRDNLWILKVDPERNLLYVKGSVPGAAGGVIRVTDARKKKFAAEATPPFPTFVQPKG--EPLPAPLMAPKGDKDPYHYEE 288
BLAST of mRNA_P-lacustris_contig11.831.1 vs. uniprot
Match: W7TPJ6_9STRA (50s ribosomal protein l3-2 n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TPJ6_9STRA) HSP 1 Score: 296 bits (757), Expect = 5.190e-96 Identity = 155/254 (61.02%), Postives = 180/254 (70.87%), Query Frame = 1
Query: 160 PSVRRSGALAMKVGSMAIFDSWGVRHPVTVLQLDECEVVQVKTTETDGYTSVQLGVGERKLKNVNKADLGRFQQ-----AGVSPKRKLMEFRVSPEALLPVGFQVRAQHFVAGQKVDVCGTSKGKGFQGAMKRWGFKGQGASHGVSKTHRHIGSTGQCQDPGRVFKGKKMPGRMGTNRVTVQNLKILKIDPARELLFVKGHVPGQNGGFVRVTDAIKGPAFPSDPPFPSFVAEGGGDESSQQEIWCPQGEEDPL 906
P RRSGA+A+KVG + ++D WG R+ TVLQLD +VVQVK TDGYTSVQLG GE+KLKN ++ + G + +PKRKL EFRV+P+AL+ G V AQHFV GQ VDV GTSKGKGFQG MKRW FKGQGASHG S +HR +GSTGQ PGRVFKGKKMPGR+G RVTVQNL + KID R LL+VKGHVPG G +VRV+DAIKG FP PP P+FV E G + EI E DPL
Sbjct: 75 PPTRRSGAIALKVGMLGVYDQWGRRYACTVLQLDAVQVVQVKKEATDGYTSVQLGAGEKKLKNASRPERGHLDRWIDGHGTAAPKRKLWEFRVTPDALMAPGTPVLAQHFVPGQLVDVVGTSKGKGFQGVMKRWNFKGQGASHGASLSHRSLGSTGQNTSPGRVFKGKKMPGRLGGERVTVQNLWLYKIDTERNLLYVKGHVPGPKGTYVRVSDAIKGAHFPVPPPVPTFVPEAGI--AYPGEITAQLPEADPL 326
BLAST of mRNA_P-lacustris_contig11.831.1 vs. uniprot
Match: A0A5D6XYL2_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XYL2_9STRA) HSP 1 Score: 294 bits (752), Expect = 1.010e-95 Identity = 153/264 (57.95%), Postives = 185/264 (70.08%), Query Frame = 1
Query: 130 PMSFEAREWVPSVRRSGALAMKVGSMAIFDSWGVRHPVTVLQLDECEVVQVKTTETDGYTSVQLGVGERKLKNVNKADLGRFQQAGVSPKRKLMEFRVSPEALLPVGFQVRAQHFVAGQKVDVCGTSKGKGFQGAMKRWGFKGQGASHGVSKTHRHIGSTGQCQDPGRVFKGKKMPGRMGTNRVTVQNLKILKIDPARELLFVKGHVPGQNGGFVRVTDAIKGPAFPSDP-PFPSFVAEGGGDESSQQEIWCPQGEEDPLEIVE 918
P+S + +EW P +RSG LA+K+G + ++D +G HP TVL ++EC+V QVKT + G+ ++QLGVG RK +NV K LG +AGV PKR+L EFRVS +ALLP+G + A HF AGQ VDVCG SKGKGFQG MKR F GQ ASHG SKT RH+GSTGQ QDPG+VFKGKKMPGRMG RVT NL ++KID R LL+VKG VPG GG VRVTDA K PS P P+P+F+ G E+ EI P GE DP E
Sbjct: 42 PISLDPKEWAPGKKRSGLLAVKIGCLPVWDHFGFCHPCTVLHVEECQVTQVKTADRHGFNALQLGVGLRKPRNVTKPVLGHLAKAGVPPKRQLQEFRVSEDALLPLGTTLTALHFTAGQFVDVCGISKGKGFQGVMKRHNFAGQPASHGNSKTERHMGSTGQSQDPGKVFKGKKMPGRMGGERVTRDNLWVVKIDTERNLLYVKGSVPGNKGGIVRVTDARK--KSPSAPLPYPTFIPTAG--EAIPAEIMAPHGEVDPYHYDE 301 The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig11.831.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-lacustris_contig11.831.1 >prot_P-lacustris_contig11.831.1 ID=prot_P-lacustris_contig11.831.1|Name=mRNA_P-lacustris_contig11.831.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=311bp ARRVLSSFARPATSTEGSSDNTPFEPDWDEGGGAGVGGGGGVAPMSFEARback to top mRNA from alignment at P-lacustris_contig11:431022..439125- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-lacustris_contig11.831.1 ID=mRNA_P-lacustris_contig11.831.1|Name=mRNA_P-lacustris_contig11.831.1|organism=Pleurocladia lacustris SAG_25_93|type=mRNA|length=8104bp|location=Sequence derived from alignment at P-lacustris_contig11:431022..439125- (Pleurocladia lacustris SAG_25_93)back to top Coding sequence (CDS) from alignment at P-lacustris_contig11:431022..439125- >mRNA_P-lacustris_contig11.831.1 ID=mRNA_P-lacustris_contig11.831.1|Name=mRNA_P-lacustris_contig11.831.1|organism=Pleurocladia lacustris SAG_25_93|type=CDS|length=1866bp|location=Sequence derived from alignment at P-lacustris_contig11:431022..439125- (Pleurocladia lacustris SAG_25_93)back to top |