mRNA_P-lacustris_contig11.823.1 (mRNA) Pleurocladia lacustris SAG_25_93
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Overview
Homology
BLAST of mRNA_P-lacustris_contig11.823.1 vs. uniprot
Match: D8LR34_ECTSI (Protein disulfide isomerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LR34_ECTSI) HSP 1 Score: 431 bits (1107), Expect = 7.220e-144 Identity = 240/370 (64.86%), Postives = 259/370 (70.00%), Query Frame = 1
Query: 1 VAPQNFVSLLDGSANVLLEFYAPWCGHCKKLAPEYEELGGHFSKDEDGIMIAKVDSQAHAELAGMYGVTGYPTLKWMPKGKSSPSDAETVNAPRSADGLGKWITEKTGVRARKPAETPSAVFDLTLETFDSIAMDPTKHVLVEFYAPWCGHCKSLAPVYEKLGKAFEAETGVVVAKVDAVEEKALGERFGVTGFPTLKYFPAGDGEAEAYGDARDLESLVEFLNRKAGTSRTPDGGLWECRPPGGPRHGPGLTLMARRPPR*PQGRPGRSRRQGRVPRGLRRRHFRWALCAHRPEAV*QR-----QGLPCDGAQEAGGFARWGCAGGAAMISAQKRTLFMVRSNILRAFVELGFGEGEERDAEAGVKAEL 1095
V QNF S++DGSANVLLEFYAPWCGHCKKLAPEYEELG FSKD DGI+IAKVD+ AH + A + VT +PT+KWMPKGK++PSDAE VNAPRSADGLGKWIT+KTGV+ARKPAE PSAV DLTLETFDSI MDPTKH LVEFYAPWCGHCKSLAPVYEKLGK F+AET VVVAKVDAVEEK LG RFGVTGFPTLKYFPAGDGEAEAYG RDL+S VEFLN KAGTSRTPDGGL G L +R P S + G A A Q+ G + G A ISAQKRTLFMVRSNILRAF E GFGEG E E GV+ EL
Sbjct: 28 VTGQNFESVVDGSANVLLEFYAPWCGHCKKLAPEYEELGKQFSKD-DGIVIAKVDAVAHKDTAVPFDVTAFPTIKWMPKGKTAPSDAEMVNAPRSADGLGKWITDKTGVQARKPAEAPSAVLDLTLETFDSIVMDPTKHALVEFYAPWCGHCKSLAPVYEKLGKVFQAETSVVVAKVDAVEEKDLGGRFGVTGFPTLKYFPAGDGEAEAYGGGRDLKSFVEFLNDKAGTSRTPDGGLAGS---AGRLEVLDAVLASRSGLADPLAGLKASLEEAAAKAGYGEEGSDAAASAGHYARAAQKLSEKGNGYLAKELKRLEGLLGXXXXXXXATISAQKRTLFMVRSNILRAFKEFGFGEGGE--GETGVQGEL 391
BLAST of mRNA_P-lacustris_contig11.823.1 vs. uniprot
Match: W7TR80_9STRA (Protein disulfide isomerase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TR80_9STRA) HSP 1 Score: 260 bits (664), Expect = 6.440e-78 Identity = 131/238 (55.04%), Postives = 162/238 (68.07%), Query Frame = 1
Query: 1 VAPQNFVSLLDGSANVLLEFYAPWCGHCKKLAPEYEELGGHFSKDEDGIMIAKVDSQAHAELAGMYGVTGYPTLKWMPKGKSSPSDAETVNAPRSADGLGKWITEKTGVRARKPAETPSAVFDLTLETFDSIAMDPTKHVLVEFYAPWCGHCKSLAPVYEKLGKAFEAETGVVVAKVDAVEEKALGERFGVTGFPTLKYFPAGDG-EAEAYGDARDLESLVEFLNRKAGTSRTPDGGL 711
+ P NF ++DGS NVL+EFYAPWCGHCK LAPEYE + G K DG++IAKVD+ A L + V G+PTLKW PKG ++P + E R+AD + W+ KTG+ +RK + SAV +LT FDS+AMDPTK VLV F APWCGHCK+LAP YE + K F E VVVAKVDA + + L RF V+G+PTLK+FP G+G E EAY RD+ V FLN KAGT+ T GGL
Sbjct: 22 LTPANFDQVVDGSQNVLVEFYAPWCGHCKTLAPEYE-IAGDVYKAGDGVVIAKVDADAERSLGERFDVKGFPTLKWFPKGSTAPEEYE---GGRTADTIVSWVNGKTGL-SRKVKKMASAVVELTDGNFDSLAMDPTKDVLVGFTAPWCGHCKTLAPKYEAVAKIFAGERDVVVAKVDATQYRDLASRFDVSGYPTLKFFPRGEGKEVEAYEHGRDVVDFVNFLNEKAGTAYTATGGL 254
BLAST of mRNA_P-lacustris_contig11.823.1 vs. uniprot
Match: A0A176WRD3_MARPO (Uncharacterized protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A176WRD3_MARPO) HSP 1 Score: 256 bits (654), Expect = 2.050e-76 Identity = 126/239 (52.72%), Postives = 158/239 (66.11%), Query Frame = 1
Query: 1 VAPQNFVSLLDGSANVLLEFYAPWCGHCKKLAPEYEELGGHFSKDEDGIMIAKVDSQAHAELAGMYGVTGYPTLKWMPKGKSSPSDAETVNAPRSADGLGKWITEKTGVRARKPAETPSAVFDLTLETFDSIAMDPTKHVLVEFYAPWCGHCKSLAPVYEKLGKAFEAETGVVVAKVDAVEEKALGERFGVTGFPTLKYFPAGDGEAEAYGDARDLESLVEFLNRKAGTSRTPDGGLWE 717
++P NF + S L+EFYAPWCGHCKKLAPEYE+LG F K ++ +MI KVD H L +GV+G+PTLKW P G P D + R+ D L +++ + G RA K + PS V LT FD++ +D +K VLVEFYAPWCGHCKSLAPVYE++ AF+ E+ VVVAK DA + LGERFGV GFPT+K+FP E Y RDLE V++LN +AGT RTP GGL E
Sbjct: 32 LSPDNFDLEVGQSKGALVEFYAPWCGHCKKLAPEYEKLGATFKKTKN-VMIGKVDCDQHKPLCSKFGVSGFPTLKWFPAGSQEPKD---YSGGRTVDALTEFVNAEAGTRA-KLSTPPSDVVVLTPANFDAVVLDKSKDVLVEFYAPWCGHCKSLAPVYEEVATAFKKESNVVVAKCDADAHRELGERFGVHGFPTIKFFPKNQKEGVEYDADRDLEDFVKYLNEQAGTHRTPSGGLTE 265
BLAST of mRNA_P-lacustris_contig11.823.1 vs. uniprot
Match: A0A0L0RWP5_ALLM3 (Protein disulfide-isomerase domain n=2 Tax=Allomyces macrogynus (strain ATCC 38327) TaxID=578462 RepID=A0A0L0RWP5_ALLM3) HSP 1 Score: 256 bits (653), Expect = 3.890e-76 Identity = 127/238 (53.36%), Postives = 152/238 (63.87%), Query Frame = 1
Query: 1 VAPQNFVSLLDGSANVLLEFYAPWCGHCKKLAPEYEELGGHFSKDEDGIMIAKVDSQAHAELAGMYGVTGYPTLKWMPKGKSSPSDAETVNAPRSADGLGKWITEKTGVRARKPAETPSAVFDLTLETFDSIAMDPTKHVLVEFYAPWCGHCKSLAPVYEKLGKAFEAETGVVVAKVDAVEEKALGERFGVTGFPTLKYFPAGDGEAE-AYGDARDLESLVEFLNRKAGTSRTPDGGL 711
+ P NF S++ G + L+EFYAPWCGHCK LAP YEEL F ++IAKVD+ AH EL +GV G+PTLKW PKG ++P D + RS + L +I +KT + AR + P+ V LT TFD I MDP KHVLV F APWCGHCK+L P YEKL K F E VV+A VDA LGERFGV G+PT+KYFPAG +A AY RD VEFLN AGT R+ G L
Sbjct: 25 LTPTNFDSIISGDKHALVEFYAPWCGHCKSLAPTYEELSTVFKHATKDLVIAKVDADAHRELGTRFGVQGFPTLKWFPKGSTTPEDYQ---GGRSLEDLASYIKDKTSINARIK-KVPTDVATLTSSTFDEIVMDPAKHVLVTFTAPWCGHCKNLKPTYEKLAKTFATEPNVVIANVDATAHPDLGERFGVQGYPTIKYFPAGKDKAPVAYEGGRDEADFVEFLNANAGTHRSAGGAL 258
BLAST of mRNA_P-lacustris_contig11.823.1 vs. uniprot
Match: A0A8K1FKW4_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FKW4_PYTOL) HSP 1 Score: 253 bits (645), Expect = 3.150e-75 Identity = 128/239 (53.56%), Postives = 151/239 (63.18%), Query Frame = 1
Query: 1 VAPQNFVSLLDGSANVLLEFYAPWCGHCKKLAPEYEELGGHFSKDEDGIMIAKVDSQAHAELAGMYGVTGYPTLKWMPKGKSSPSDAETVNAPRSADGLGKWITEKTGVRAR--KPAETPSAVFDLTLETFDSIAMDPTKHVLVEFYAPWCGHCKSLAPVYEKLGKAFEAETGVVVAKVDAVEEKALGERFGVTGFPTLKYFPAGDGEAEAYGDARDLESLVEFLNRKAGTSRTPDGGL 711
+ P NF +++DGS NVL+EFYAPWCGHCK LAP YE + F K D I+IAKVD+ AH +LA Y VTG+PTLKW PKG D + R D ++ EK G R KP PS V L FD+ + KH LVEFYAPWCGHCKSLAP YE++GK F E V+VAKVDA AL R+GV+G+PTLKYF G + E Y RD +S V FLN KAGT R DGGL
Sbjct: 24 LTPDNFDTVVDGSKNVLVEFYAPWCGHCKNLAPTYEVIATSFKK-VDSIVIAKVDADAHKDLAQSYKVTGFPTLKWFPKGSIKEED---YSGGRGEDDFASFLNEKLGTNVRIIKP---PSFVAALGESDFDAEVIQSKKHALVEFYAPWCGHCKSLAPTYEEVGKIFSGEESVLVAKVDATAHSALASRYGVSGYPTLKYFAPGSDDPEDYKSGRDKQSFVTFLNEKAGTHRNVDGGL 255
BLAST of mRNA_P-lacustris_contig11.823.1 vs. uniprot
Match: I1HF62_BRADI (Uncharacterized protein n=3 Tax=Pooideae TaxID=147368 RepID=I1HF62_BRADI) HSP 1 Score: 253 bits (645), Expect = 4.650e-75 Identity = 122/221 (55.20%), Postives = 151/221 (68.33%), Query Frame = 1
Query: 49 LLEFYAPWCGHCKKLAPEYEELGGHFSKDEDGIMIAKVDSQAHAELAGMYGVTGYPTLKWMPKGKSSPSDAETVNAPRSADGLGKWITEKTGVRARKPAETPSAVFDLTLETFDSIAMDPTKHVLVEFYAPWCGHCKSLAPVYEKLGKAFEAETGVVVAKVDAVEEKALGERFGVTGFPTLKYFPAGDGEAEAYGDARDLESLVEFLNRKAGTSRTPDGGL 711
L+EFYAPWCGHCKKLAPEYE+LG F K +MIAKVD H + YGV+GYPT++W PKG P E R+A+ L +++ ++ G K A PS+V LT ETFDS+ +D TK VLVEFYAPWCGHCK LAP+YEKL AF+ + GVV+A VDA + K LGE++GVTGFPTLK+FP G+ E Y RDL +F+N K GTSR +G L
Sbjct: 52 LVEFYAPWCGHCKKLAPEYEKLGASFKKARS-VMIAKVDCDEHKSVCSKYGVSGYPTIQWFPKGSLEPKKYE---GQRTAEALAEFVNKEGGTNV-KLATIPSSVVVLTPETFDSVVLDETKDVLVEFYAPWCGHCKHLAPIYEKLASAFKLDDGVVIANVDADKYKDLGEKYGVTGFPTLKFFPKGNKAGEDYDGGRDLGDFTKFINEKCGTSRDTNGQL 267
BLAST of mRNA_P-lacustris_contig11.823.1 vs. uniprot
Match: Q5EUD6_MAIZE (Protein disulfide isomerase n=20 Tax=Panicoideae TaxID=147369 RepID=Q5EUD6_MAIZE) HSP 1 Score: 251 bits (641), Expect = 1.760e-74 Identity = 120/233 (51.50%), Postives = 152/233 (65.24%), Query Frame = 1
Query: 13 NFVSLLDGSANVLLEFYAPWCGHCKKLAPEYEELGGHFSKDEDGIMIAKVDSQAHAELAGMYGVTGYPTLKWMPKGKSSPSDAETVNAPRSADGLGKWITEKTGVRARKPAETPSAVFDLTLETFDSIAMDPTKHVLVEFYAPWCGHCKSLAPVYEKLGKAFEAETGVVVAKVDAVEEKALGERFGVTGFPTLKYFPAGDGEAEAYGDARDLESLVEFLNRKAGTSRTPDGGL 711
+F + L+EFYAPWCGHCKKLAPEYE+LG F K + ++IAKVD H + YGV+GYPT++W PKG P E RS + L +++ + G K A PS+V LT ETFDSI +D TK VLVEFYAPWCGHCK LAP+YEKL F+ + GVV+A +DA + L E++GV+GFPTLK+FP G+ E Y RDL+ V+F+N K GTSR P G L
Sbjct: 39 DFEKEVGQDRGALVEFYAPWCGHCKKLAPEYEKLGASFKKAKS-VLIAKVDCDEHKSVCSKYGVSGYPTIQWFPKGSLEPKKYE---GQRSVEALAEFVNSEAGTNV-KIAAIPSSVVVLTSETFDSIVLDETKDVLVEFYAPWCGHCKHLAPIYEKLASVFKQDDGVVIANIDADKHTDLAEKYGVSGFPTLKFFPKGNKAGEDYDGGRDLDDFVKFINEKCGTSRDPKGHL 266
BLAST of mRNA_P-lacustris_contig11.823.1 vs. uniprot
Match: A0A059A8W3_EUCGR (Uncharacterized protein n=1 Tax=Eucalyptus grandis TaxID=71139 RepID=A0A059A8W3_EUCGR) HSP 1 Score: 248 bits (632), Expect = 2.830e-74 Identity = 119/234 (50.85%), Postives = 154/234 (65.81%), Query Frame = 1
Query: 10 QNFVSLLDGSANVLLEFYAPWCGHCKKLAPEYEELGGHFSKDEDGIMIAKVDSQAHAELAGMYGVTGYPTLKWMPKGKSSPSDAETVNAPRSADGLGKWITEKTGVRARKPAETPSAVFDLTLETFDSIAMDPTKHVLVEFYAPWCGHCKSLAPVYEKLGKAFEAETGVVVAKVDAVEEKALGERFGVTGFPTLKYFPAGDGEAEAYGDARDLESLVEFLNRKAGTSRTPDGGL 711
+NF + L+EFYAPWCGHCKKLAPEYE+LG F K + I+I KVD H + YGV+GYPT++W PKG P E PR+A+ L +++ + G K A PS+V LT + F+ I +D TK VLVEFYAPWCGHCK+LAP YEK+ AF++E GVV+A +DA + K LGE++GV+GFPTLK+FP + + E Y RDL+ V F+N K GTSR G L
Sbjct: 31 ENFDKEVGQDRAALVEFYAPWCGHCKKLAPEYEKLGSSFKKAKS-ILIGKVDCDEHKSVCSKYGVSGYPTIQWFPKGSLEPKKYE---GPRTAEALAEFVNNEGGTNV-KIAAVPSSVAVLTSDNFNEIVLDKTKDVLVEFYAPWCGHCKALAPTYEKVAAAFKSEDGVVIANLDADKYKDLGEKYGVSGFPTLKFFPKNNKDGEEYDGGRDLDDFVNFINEKCGTSRDGKGEL 259
BLAST of mRNA_P-lacustris_contig11.823.1 vs. uniprot
Match: A0A2K1KP63_PHYPA (Uncharacterized protein n=3 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1KP63_PHYPA) HSP 1 Score: 250 bits (639), Expect = 3.570e-74 Identity = 121/233 (51.93%), Postives = 153/233 (65.67%), Query Frame = 1
Query: 13 NFVSLLDGSANVLLEFYAPWCGHCKKLAPEYEELGGHFSKDEDGIMIAKVDSQAHAELAGMYGVTGYPTLKWMPKGKSSPSDAETVNAPRSADGLGKWITEKTGVRARKPAETPSAVFDLTLETFDSIAMDPTKHVLVEFYAPWCGHCKSLAPVYEKLGKAFEAETGVVVAKVDAVEEKALGERFGVTGFPTLKYFPAGDGEAEAYGDARDLESLVEFLNRKAGTSRTPDGGL 711
NF + G L+EFYAPWCGHCKKLAPEYE+LG + + ++IAKVD H + YG+ G+PT+KW PKG P D N R+ D L +++ + G + K + PS V L FD I MD TK VLVEFYAPWCGHCKSLAPVYEK+ AF+ E VVVA V+A +ALG RFGV+G+PTLK+FP + + E Y RD+++ V FLN+KAGT+RT GGL
Sbjct: 38 NFEQHVGGDKGALVEFYAPWCGHCKKLAPEYEKLGEALT-GQKSVLIAKVDCDDHKSVCSKYGIQGFPTIKWFPKGSLEPKD---YNGGRTTDALLEFVNNEAGTKG-KVSTPPSEVVVLDPTNFDKIVMDTTKDVLVEFYAPWCGHCKSLAPVYEKVAAAFKLENDVVVANVNADAHRALGSRFGVSGYPTLKFFPKNNKDGEDYDGGRDVDAFVTFLNKKAGTARTSSGGL 265
BLAST of mRNA_P-lacustris_contig11.823.1 vs. uniprot
Match: A0A4Y7ILH8_PAPSO (Uncharacterized protein n=2 Tax=Papaver somniferum TaxID=3469 RepID=A0A4Y7ILH8_PAPSO) HSP 1 Score: 250 bits (638), Expect = 4.190e-74 Identity = 119/234 (50.85%), Postives = 155/234 (66.24%), Query Frame = 1
Query: 10 QNFVSLLDGSANVLLEFYAPWCGHCKKLAPEYEELGGHFSKDEDGIMIAKVDSQAHAELAGMYGVTGYPTLKWMPKGKSSPSDAETVNAPRSADGLGKWITEKTGVRARKPAETPSAVFDLTLETFDSIAMDPTKHVLVEFYAPWCGHCKSLAPVYEKLGKAFEAETGVVVAKVDAVEEKALGERFGVTGFPTLKYFPAGDGEAEAYGDARDLESLVEFLNRKAGTSRTPDGGL 711
+NF + L+EFYAPWCGHCKKLAPEYE+LGG+F K + ++I KVD H + G YGV+GYPTL+W P+G P E PR+A+ L +++ + G K A PS+V LT E F+ I +D TK VLVEFYAPWCGHCKSLAP+YEK+ A++ E VV+A +DA + K L ER+G++GFPTLK+FP G+ E Y RD++ V F+N K GTSR G L
Sbjct: 33 ENFEKQVGQDRGALVEFYAPWCGHCKKLAPEYEKLGGNFKKAKS-VLIGKVDCDEHKSVCGKYGVSGYPTLQWFPQGSLEPKKYE---GPRTAEALTEFVNTEAGTNV-KLATIPSSVVVLTGENFNEIVLDETKDVLVEFYAPWCGHCKSLAPIYEKVASAYKLEGDVVIANLDADKHKDLAERYGISGFPTLKFFPKGNKAGEDYDGGRDVDDFVSFINEKCGTSRDGKGQL 261 The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig11.823.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-lacustris_contig11.823.1 >prot_P-lacustris_contig11.823.1 ID=prot_P-lacustris_contig11.823.1|Name=mRNA_P-lacustris_contig11.823.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=213bp MIAKVDSQAHAELAGMYGVTGYPTLKWMPKGKSSPSDAETVNAPRSADGLback to top mRNA from alignment at P-lacustris_contig11:348569..353366- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-lacustris_contig11.823.1 ID=mRNA_P-lacustris_contig11.823.1|Name=mRNA_P-lacustris_contig11.823.1|organism=Pleurocladia lacustris SAG_25_93|type=mRNA|length=4798bp|location=Sequence derived from alignment at P-lacustris_contig11:348569..353366- (Pleurocladia lacustris SAG_25_93)back to top Coding sequence (CDS) from alignment at P-lacustris_contig11:348569..353366- >mRNA_P-lacustris_contig11.823.1 ID=mRNA_P-lacustris_contig11.823.1|Name=mRNA_P-lacustris_contig11.823.1|organism=Pleurocladia lacustris SAG_25_93|type=CDS|length=1278bp|location=Sequence derived from alignment at P-lacustris_contig11:348569..353366- (Pleurocladia lacustris SAG_25_93)back to top |