mRNA_P-lacustris_contig11.806.1 (mRNA) Pleurocladia lacustris SAG_25_93
|
Overview
Homology
BLAST of mRNA_P-lacustris_contig11.806.1 vs. uniprot
Match: A0A6H5JCG3_9PHAE (Ribosomal_L18_c domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JCG3_9PHAE) HSP 1 Score: 513 bits (1320), Expect = 2.050e-177 Identity = 272/333 (81.68%), Postives = 285/333 (85.59%), Query Frame = 1
Query: 1 QAFVKVQKTKAYFKRYQVKFRRRREGKTDYRARKRLICQDKNKYNSPKYRLVVRFTNKYVLAQIIYATIQGDICMCQASSKELPRYGLKVGLKNYAASYCTGLLVARRLLRQLGLDEADEEKKMENLYTGQGVXXXXXXXXXXXXXXXXXXXVDGQVVKSESNGRTYYVDEVDEEKRPFKALLDVGIRSTSTGNRVFGCMKGATDGGLDIPHNEKRFPGYDRDTKSYDAEMHRDRIYGAHVAEYMEYLTEEDEAKYKEHFASYIENEISFDDVEEMYKETHKAIREDPSPAEKTAFSPDKSFKNTVKLTYDQRKERVAAKKEEILAARAAEDE 999
+AFVKVQKTKAYFKRYQVKFRRRREGKTDYRARKRLICQDKNKYNSPKYRLVVRFTNK+VLAQIIYATIQGD+CMCQASS ELPRYG KVGLKNYAA+YCTGLLVARRLLRQLGLDEAD+EKKMENLYTGQGV XXXX +VVKSESNGRTYYVDEVDEEKRPFKALLDVGIRSTSTGNRVFGCMKGA DGGLD+PHNEKRFPGYDRDTK YD EDEAKYKEHFASYIENE++F+D+E+MYKETHKAIREDPSPA KTAF+PDKSFKN VKLTY QRKERVAAKKEEI AARAAEDE
Sbjct: 7 EAFVKVQKTKAYFKRYQVKFRRRREGKTDYRARKRLICQDKNKYNSPKYRLVVRFTNKFVLAQIIYATIQGDVCMCQASSTELPRYGCKVGLKNYAAAYCTGLLVARRLLRQLGLDEADDEKKMENLYTGQGVGVEEDGDDXXXXVDGNDGTDGLRVVKSESNGRTYYVDEVDEEKRPFKALLDVGIRSTSTGNRVFGCMKGAADGGLDVPHNEKRFPGYDRDTKQYDVS--------------------EDEAKYKEHFASYIENELTFEDIEDMYKETHKAIREDPSPAPKTAFTPDKSFKNAVKLTYAQRKERVAAKKEEIRAARAAEDE 319
BLAST of mRNA_P-lacustris_contig11.806.1 vs. uniprot
Match: A0A1Z5J7J4_FISSO (Large subunit ribosomal protein L5e n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5J7J4_FISSO) HSP 1 Score: 400 bits (1029), Expect = 1.360e-133 Identity = 204/331 (61.63%), Postives = 252/331 (76.13%), Query Frame = 1
Query: 7 FVKVQKTKAYFKRYQVKFRRRREGKTDYRARKRLICQDKNKYNSPKYRLVVRFTNKYVLAQIIYATIQGDICMCQASSKELPRYGLKVGLKNYAASYCTGLLVARRLLRQLGLDEADEEKKMENLYTGQGVXXXXXXXXXXXXXXXXXXXVDGQVVKSESNGRTYYVDEVDEEKRPFKALLDVGIRSTSTGNRVFGCMKGATDGGLDIPHNEKRFPGYDRDTKSYDAEMHRDRIYGAHVAEYMEYLTEEDEAKYKEHFASYIENEISFDDVEEMYKETHKAIREDPSPAEKTAFSPDKSFKNTVKLTYDQRKERVAAKKEEILAARAAEDE 999
FV+ KTKAYF RYQVKFRRRREGKTDYR RKRL+CQDKNKY SPKYRLVVRFTN+ V+ QI+Y+ I GD + QA+SKEL RYGL VGLKNYAA+YCTGLLVARR+L++LGLD+ +Y G VDGQ+V ++ + + YYVDEVD++K+PF+ LDVG R+TSTG R+FG +KGA DGGLDIPH+EKRFPGYDRDTK YDA+MHR+RI+G HV+EYMEYL EED AKY+ HF S++EN+I+ D +EE+Y+ H+ IREDPSP+EK F+PDKS+K KLT+D+RK RV AKK+ A AA++E
Sbjct: 3 FVQATKTKAYFSRYQVKFRRRREGKTDYRQRKRLVCQDKNKYQSPKYRLVVRFTNQQVICQIVYSLIDGDRVLAQATSKELARYGLSVGLKNYAAAYCTGLLVARRVLQKLGLDD---------VYEGN-------------------TEVDGQIVSTDYDNKKYYVDEVDDDKKPFRCFLDVGCRTTSTGCRIFGALKGAADGGLDIPHSEKRFPGYDRDTKEYDADMHRERIFGGHVSEYMEYLEEEDNAKYQSHFKSFLENDIAGDGLEELYEGVHEKIREDPSPSEKKEFTPDKSYKRKSKLTHDERKARVQAKKDAKKAELAADEE 305
BLAST of mRNA_P-lacustris_contig11.806.1 vs. uniprot
Match: A0A448Z3Q5_9STRA (Ribosomal_L18_c domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z3Q5_9STRA) HSP 1 Score: 396 bits (1018), Expect = 6.460e-132 Identity = 205/330 (62.12%), Postives = 246/330 (74.55%), Query Frame = 1
Query: 7 FVKVQKTKAYFKRYQVKFRRRREGKTDYRARKRLICQDKNKYNSPKYRLVVRFTNKYVLAQIIYATIQGDICMCQASSKELPRYGLKVGLKNYAASYCTGLLVARRLLRQLGLDEADEEKKMENLYTGQGVXXXXXXXXXXXXXXXXXXXVDGQVVKSESNGRTYYVDEVDEEKRPFKALLDVGIRSTSTGNRVFGCMKGATDGGLDIPHNEKRFPGYDRDTKSYDAEMHRDRIYGAHVAEYMEYLTEEDEAKYKEHFASYIENEISFDDVEEMYKETHKAIREDPSPAEKTAFSPDKSFKNTVKLTYDQRKERVAAKKEEILAARAAED 996
F++ +TKAYF RYQVKFRRRREGKTDYRARKRL QDKNKY SPKYRLVVRFTN V+ QI YA + GD +CQA S EL RYGL VGLKNYAA+YCTGLL ARRLL+++GLDE +Y G VDG+VV +E + +TY+V+EVD++KRPF+ALLDVG + T+TG+R+FG +KGA DGGLD+PH+EKRFPGYDRD K YD++MHR+RI+G HV+EYMEYL EED KYKEHFA YIE ++ D +EE+Y+ H+AIREDPSP+EK FSPDKSFK KLTYD+RK VAAKK +A AED
Sbjct: 3 FIQEGRTKAYFSRYQVKFRRRREGKTDYRARKRLCAQDKNKYQSPKYRLVVRFTNTKVICQIAYALVDGDRILCQAQSTELGRYGLTVGLKNYAAAYCTGLLCARRLLQKVGLDE---------IYEGN-------------------TEVDGEVVSTEYDKKTYFVEEVDDDKRPFRALLDVGCKPTTTGHRLFGALKGAADGGLDVPHSEKRFPGYDRDAKEYDSDMHRERIFGGHVSEYMEYLEEEDNQKYKEHFAKYIEADVEGDSLEELYESVHEAIREDPSPSEKKDFSPDKSFKRPAKLTYDERKAAVAAKKAAKVAELEAED 304
BLAST of mRNA_P-lacustris_contig11.806.1 vs. uniprot
Match: A0A7S2S5W4_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2S5W4_9STRA) HSP 1 Score: 396 bits (1018), Expect = 6.460e-132 Identity = 207/331 (62.54%), Postives = 246/331 (74.32%), Query Frame = 1
Query: 7 FVKVQKTKAYFKRYQVKFRRRREGKTDYRARKRLICQDKNKYNSPKYRLVVRFTNKYVLAQIIYATIQGDICMCQASSKELPRYGLKVGLKNYAASYCTGLLVARRLLRQLGLDEADEEKKMENLYTGQGVXXXXXXXXXXXXXXXXXXXVDGQVVKSESNGRTYYVDEVDEEKRPFKALLDVGIRSTSTGNRVFGCMKGATDGGLDIPHNEKRFPGYDRDTKSYDAEMHRDRIYGAHVAEYMEYLTEEDEAKYKEHFASYIENEISFDDVEEMYKETHKAIREDPSPAEKTAFSPDKSFKNTVKLTYDQRKERVAAKKEEILAARAAEDE 999
F +VQK K+YF R+QVK+RRRREGKTDYR RK+L Q KNKY SPKYRLVVRFTN+ V+ QI YA I GD +CQASS EL RYGL VGLKNYAA+YCTGLLVARRLL+++GLDE +Y G VDG+VV +E N +TYYVDEVDE++RPF+ALLDVG R+T+TG R+FG +KGA DGGLD+PH+EKRFPGYDRD K YDAEMHR+RI+G HV EYMEYL EED KYK+ FASYIE EI D +EE+Y+ H+A+REDPS +EK AF+PDKSFK KL+YD+RK RV AKK+ A +DE
Sbjct: 3 FCRVQKNKSYFSRFQVKYRRRREGKTDYRQRKKLCTQAKNKYQSPKYRLVVRFTNRLVICQIAYAMIDGDRVLCQASSAELSRYGLSVGLKNYAAAYCTGLLVARRLLQKVGLDE---------VYEGN-------------------TEVDGEVVSTEVNKKTYYVDEVDEDRRPFRALLDVGCRATTTGCRIFGALKGAADGGLDVPHSEKRFPGYDRDGKEYDAEMHRERIFGGHVGEYMEYLEEEDNTKYKQQFASYIEEEIDADGLEELYEGVHEAVREDPSASEKVAFTPDKSFKRPSKLSYDERKARVQAKKDAKKAELEEDDE 305
BLAST of mRNA_P-lacustris_contig11.806.1 vs. uniprot
Match: A0A7S0BVS7_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0BVS7_9STRA) HSP 1 Score: 395 bits (1016), Expect = 2.890e-131 Identity = 209/332 (62.95%), Postives = 249/332 (75.00%), Query Frame = 1
Query: 7 FVKVQKTKAYFKRYQVKFRRRREGKTDYRARKRLICQDKNKYNSPKYRLVVRFTNKYVLAQIIYATIQGDICMCQASSKELPRYGLKVGLKNYAASYCTGLLVARRLLRQLGLDEADEEKKMENLYTGQGVXXXXXXXXXXXXXXXXXXXVDGQVVKSE-SNGRTYYVDEVDEEKRPFKALLDVGIRSTSTGNRVFGCMKGATDGGLDIPHNEKRFPGYDRDTKSYDAEMHRDRIYGAHVAEYMEYLTEEDEAKYKEHFASYIENEISFDDVEEMYKETHKAIREDPSPAEKTAFSPDKSFKNTVKLTYDQRKERVAAKKEEILAARAAEDE 999
FVKVQK+KAYF R+QVKFRRRREGKTDYR RKRL CQDKNKY SPKYRLVVRFTN+ V+ QI YA I GD +CQASS EL RYGL VGLKNYAA+YCTGLL ARRLL+++GLD +Y G +D +VVK+E S+G+TY+V+EVD++KRPF+ALLDVG ++T+TG R+FG +KGA DGGLDIPH+EKRFPGYDRD K YDAEMH++RI+G HV EYMEYL EED KY+EHF YI+ +I D +EE+Y+ H+ IREDPS AEK A+SPDK+FK KLT QRKERV AKK+ A+ AEDE
Sbjct: 21 FVKVQKSKAYFSRFQVKFRRRREGKTDYRQRKRLCCQDKNKYQSPKYRLVVRFTNRQVICQIAYALIDGDRILCQASSTELGRYGLSVGLKNYAAAYCTGLLCARRLLQKVGLD---------GVYEGN-------------------TEIDAEVVKTEHSDGKTYFVEEVDDDKRPFRALLDVGCKATTTGCRIFGALKGAADGGLDIPHSEKRFPGYDRDAKEYDAEMHKERIFGGHVGEYMEYLEEEDNTKYQEHFKGYIDEDIEADGLEELYEGVHEKIREDPSAAEKKAYSPDKTFKRKAKLTLAQRKERVQAKKD----AKNAEDE 320
BLAST of mRNA_P-lacustris_contig11.806.1 vs. uniprot
Match: B5YLN7_THAPS (RL5, ribosomal protein 5, 60S large ribosomal subunit n=2 Tax=Ochrophyta TaxID=2696291 RepID=B5YLN7_THAPS) HSP 1 Score: 394 bits (1011), Expect = 7.350e-131 Identity = 205/331 (61.93%), Postives = 243/331 (73.41%), Query Frame = 1
Query: 7 FVKVQKTKAYFKRYQVKFRRRREGKTDYRARKRLICQDKNKYNSPKYRLVVRFTNKYVLAQIIYATIQGDICMCQASSKELPRYGLKVGLKNYAASYCTGLLVARRLLRQLGLDEADEEKKMENLYTGQGVXXXXXXXXXXXXXXXXXXXVDGQVVKSESNGRTYYVDEVDEEKRPFKALLDVGIRSTSTGNRVFGCMKGATDGGLDIPHNEKRFPGYDRDTKSYDAEMHRDRIYGAHVAEYMEYLTEEDEAKYKEHFASYIENEISFDDVEEMYKETHKAIREDPSPAEKTAFSPDKSFKNTVKLTYDQRKERVAAKKEEILAARAAEDE 999
FVKV K+KAY+KRYQVKFRRRREG+TDYR RKRL CQ KNKY SPKYR VVRF+NK V+ QI Y I GD + ASS ELPRYGLKVGLKNYAASYCTGLL ARRLL+++GLD+ +Y G +DG VVK++ TYYVDEVDE+KRPF+ALLDVG ++T+TG R+FG +KGA DGGLDIPH+EKRFPGYDRD+K YDA+MHR+RI+G HV EYMEYL EED KY+ FA Y+ENE+ D +EE+Y+ H+ IREDPSP+EK AFSPDKSFK KLT ++RK V +KK+ A AEDE
Sbjct: 3 FVKVTKSKAYYKRYQVKFRRRREGRTDYRQRKRLCCQAKNKYQSPKYRFVVRFSNKQVICQIAYTLIDGDRILTSASSNELPRYGLKVGLKNYAASYCTGLLCARRLLQKVGLDD---------VYEGND-------------------EIDGNVVKTQVGKSTYYVDEVDEDKRPFRALLDVGCKTTTTGCRIFGALKGAADGGLDIPHSEKRFPGYDRDSKEYDADMHRERIFGGHVGEYMEYLEEEDNTKYQAQFAGYLENEVEADGLEELYESVHEKIREDPSPSEKKAFSPDKSFKRKAKLTLEERKAAVQSKKDTKNAELEAEDE 305
BLAST of mRNA_P-lacustris_contig11.806.1 vs. uniprot
Match: A0A836CBG0_9STRA (RL5, ribosomal protein 5 60S large ribosomal subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBG0_9STRA) HSP 1 Score: 393 bits (1010), Expect = 1.580e-130 Identity = 206/316 (65.19%), Postives = 241/316 (76.27%), Query Frame = 1
Query: 7 FVKVQKTKAYFKRYQVKFRRRREGKTDYRARKRLICQDKNKYNSPKYRLVVRFTNKYVLAQIIYATIQGDICMCQASSKELPRYGLKVGLKNYAASYCTGLLVARRLLRQLGLDEADEEKKMENLYTGQGVXXXXXXXXXXXXXXXXXXXVDGQVVKSESNGRTYYVDEVDEEKRPFKALLDVGIRSTSTGNRVFGCMKGATDGGLDIPHNEKRFPGYDRDTKSYDAEMHRDRIYGAHVAEYMEYLTEEDEAKYKEHFASYIENEISFDDVEEMYKETHKAIREDPSPAEKTAFSPDKSFKNTVKLTYDQRKERVA 954
FVKV K KAYFKRYQVK+RRRREGKTDYRARKRLICQDKNKYN+PKYRLVVRF+N+YV QI YAT++GD +CQA+S+EL RYGLK GLKNYAA+YCTGLL ARRLL+QLGL E LY GQ +G VVK+E +TY+V+EVDE+KRPF+ALLDVGI +TSTG RVFG MKGA DGGLDIPH+EKRFPGYDRD+K +DAE+H D IYGAHV+EYMEYL EEDEA YKEHFA+YIE + +++E+ E HKAIREDPS A K F P+K +K K TY++RK +VA
Sbjct: 3 FVKVLKNKAYFKRYQVKYRRRREGKTDYRARKRLICQDKNKYNAPKYRLVVRFSNRYVNCQIAYATVEGDKILCQANSRELERYGLKTGLKNYAAAYCTGLLCARRLLKQLGLAE---------LYEGQ-------------------EEAEGTVVKTEMGKKTYFVEEVDEDKRPFRALLDVGIVATSTGARVFGAMKGAADGGLDIPHSEKRFPGYDRDSKEFDAEVHHDHIYGAHVSEYMEYLMEEDEALYKEHFATYIELGLGPENMEDTLTEVHKAIREDPSAAPKADFKPNKKYKRAAKATYEERKAKVA 290
BLAST of mRNA_P-lacustris_contig11.806.1 vs. uniprot
Match: B7FPQ0_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FPQ0_PHATC) HSP 1 Score: 392 bits (1006), Expect = 4.030e-130 Identity = 202/331 (61.03%), Postives = 244/331 (73.72%), Query Frame = 1
Query: 7 FVKVQKTKAYFKRYQVKFRRRREGKTDYRARKRLICQDKNKYNSPKYRLVVRFTNKYVLAQIIYATIQGDICMCQASSKELPRYGLKVGLKNYAASYCTGLLVARRLLRQLGLDEADEEKKMENLYTGQGVXXXXXXXXXXXXXXXXXXXVDGQVVKSESNGRTYYVDEVDEEKRPFKALLDVGIRSTSTGNRVFGCMKGATDGGLDIPHNEKRFPGYDRDTKSYDAEMHRDRIYGAHVAEYMEYLTEEDEAKYKEHFASYIENEISFDDVEEMYKETHKAIREDPSPAEKTAFSPDKSFKNTVKLTYDQRKERVAAKKEEILAARAAEDE 999
FVK K KAYF RYQVKFRRRREG+TDYR RKRL+CQDKNKY SPKYRLVVRFTN V+ QI+Y+ + GD +CQA+SKEL RYGL VGLKNYAA+YCTGLL ARRLL+++GLD+ +Y G VD +V +E + + Y+VDEVDE+KRPF+ LLDVG + T+TG+RVFG +KGA DGGLDIPH+EKRFPG+DRD+K YDA+MHR+RI+G HV EYMEYL EED KY+EHFAS+I E+ D +EE+Y+ H+ IREDPSP+ K FSPDKSFK KLT D+RK RV AKK+ A AA+DE
Sbjct: 3 FVKNTKNKAYFSRYQVKFRRRREGRTDYRQRKRLVCQDKNKYQSPKYRLVVRFTNTQVICQIVYSLVDGDRILCQANSKELARYGLSVGLKNYAAAYCTGLLAARRLLQKVGLDD---------VYEGNS-------------------EVDATIVSTEYDKKKYFVDEVDEDKRPFRCLLDVGCKPTTTGHRVFGALKGAADGGLDIPHSEKRFPGFDRDSKEYDADMHRERIFGGHVGEYMEYLEEEDNQKYQEHFASFIAAEVEADGLEELYESVHEKIREDPSPSPKKDFSPDKSFKRKAKLTLDERKARVQAKKDAKNAELAADDE 305
BLAST of mRNA_P-lacustris_contig11.806.1 vs. uniprot
Match: A0A7S1YV59_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1YV59_TRICV) HSP 1 Score: 387 bits (993), Expect = 3.820e-128 Identity = 202/331 (61.03%), Postives = 242/331 (73.11%), Query Frame = 1
Query: 7 FVKVQKTKAYFKRYQVKFRRRREGKTDYRARKRLICQDKNKYNSPKYRLVVRFTNKYVLAQIIYATIQGDICMCQASSKELPRYGLKVGLKNYAASYCTGLLVARRLLRQLGLDEADEEKKMENLYTGQGVXXXXXXXXXXXXXXXXXXXVDGQVVKSESNGRTYYVDEVDEEKRPFKALLDVGIRSTSTGNRVFGCMKGATDGGLDIPHNEKRFPGYDRDTKSYDAEMHRDRIYGAHVAEYMEYLTEEDEAKYKEHFASYIENEISFDDVEEMYKETHKAIREDPSPAEKTAFSPDKSFKNTVKLTYDQRKERVAAKKEEILAARAAEDE 999
FVKVQ +KAY RYQVK+RRRREG TDYR R+RL QDKNKY SPKYRLVVRFTN+ V+ QI Y+ I GD +CQA+S ELPRYGL+VGLKNYAA+YCTGLLVARRLL+++GLDE Y G VDG++V +E +G+ YYVDEVDE+KRPF+ LLDVG R T+TG R+FG +KGA DGGLDIPH EKRFPGYDRD+K YDA+MH++RI+G HV EYMEYL EED KY+E FA YIEN++ D +EE+Y+ H+AIREDPSP+EK FSPD S+K KLT ++RK RV AKK+ A DE
Sbjct: 3 FVKVQHSKAYSSRYQVKYRRRREGCTDYRQRRRLCTQDKNKYQSPKYRLVVRFTNRKVICQIAYSLIDGDRILCQANSDELPRYGLEVGLKNYAAAYCTGLLVARRLLQKVGLDET---------YEGN-------------------TEVDGEIVSTEVDGKKYYVDEVDEDKRPFRCLLDVGCRPTTTGCRIFGALKGAADGGLDIPHTEKRFPGYDRDSKEYDADMHKERIFGGHVGEYMEYLEEEDNQKYQECFAKYIENDVEADGLEELYEGVHEAIREDPSPSEKKDFSPDNSYKRKAKLTLEERKARVQAKKDAKKAELEESDE 305
BLAST of mRNA_P-lacustris_contig11.806.1 vs. uniprot
Match: K0TJ10_THAOC (Ribosomal_L18_c domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TJ10_THAOC) HSP 1 Score: 386 bits (991), Expect = 7.390e-128 Identity = 201/331 (60.73%), Postives = 240/331 (72.51%), Query Frame = 1
Query: 7 FVKVQKTKAYFKRYQVKFRRRREGKTDYRARKRLICQDKNKYNSPKYRLVVRFTNKYVLAQIIYATIQGDICMCQASSKELPRYGLKVGLKNYAASYCTGLLVARRLLRQLGLDEADEEKKMENLYTGQGVXXXXXXXXXXXXXXXXXXXVDGQVVKSESNGRTYYVDEVDEEKRPFKALLDVGIRSTSTGNRVFGCMKGATDGGLDIPHNEKRFPGYDRDTKSYDAEMHRDRIYGAHVAEYMEYLTEEDEAKYKEHFASYIENEISFDDVEEMYKETHKAIREDPSPAEKTAFSPDKSFKNTVKLTYDQRKERVAAKKEEILAARAAEDE 999
FVK+QK+K+Y+KRYQVKFRRRREGKTDYR RKRL CQ KNKY SPKYR VVRFTN+ V+ QI Y I GD + ASS ELPRYGL GLKNY A+YCTGLL ARRLL+++GLD+ +Y G +DG+VVK+E TYYVDEVDE+KRPF+ALLDVG ++TSTG R+FG +KGA DGGLDIPH+EKRFPGYDRD+K YDA+MHR+RI+G HV EYMEYL EED KY+E FA YI I D +EE+Y+ H+ IREDPSP+EK +F+PDKSFK KLT +QRK V AKK+ +A +DE
Sbjct: 3 FVKIQKSKSYYKRYQVKFRRRREGKTDYRQRKRLCCQAKNKYQSPKYRFVVRFTNRQVICQIAYTLIDGDRILTSASSNELPRYGLSCGLKNYGAAYCTGLLCARRLLQKVGLDD---------VYEGND-------------------EIDGEVVKTEVGKTTYYVDEVDEDKRPFRALLDVGCKTTSTGCRIFGALKGAADGGLDIPHSEKRFPGYDRDSKEYDADMHRERIFGGHVGEYMEYLEEEDNTKYQEQFAGYIAAGIDADGLEELYEGVHEKIREDPSPSEKKSFTPDKSFKRKAKLTLEQRKAAVQAKKDAKIAELEEDDE 305 The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig11.806.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-lacustris_contig11.806.1 >prot_P-lacustris_contig11.806.1 ID=prot_P-lacustris_contig11.806.1|Name=mRNA_P-lacustris_contig11.806.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=260bp MCQASSKELPRYGLKVGLKNYAASYCTGLLVARRLLRQLGLDEADEEKKMback to top mRNA from alignment at P-lacustris_contig11:74876..80643+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-lacustris_contig11.806.1 ID=mRNA_P-lacustris_contig11.806.1|Name=mRNA_P-lacustris_contig11.806.1|organism=Pleurocladia lacustris SAG_25_93|type=mRNA|length=5768bp|location=Sequence derived from alignment at P-lacustris_contig11:74876..80643+ (Pleurocladia lacustris SAG_25_93)back to top Coding sequence (CDS) from alignment at P-lacustris_contig11:74876..80643+ >mRNA_P-lacustris_contig11.806.1 ID=mRNA_P-lacustris_contig11.806.1|Name=mRNA_P-lacustris_contig11.806.1|organism=Pleurocladia lacustris SAG_25_93|type=CDS|length=1560bp|location=Sequence derived from alignment at P-lacustris_contig11:74876..80643+ (Pleurocladia lacustris SAG_25_93)back to top |