mRNA_P-lacustris_contig1086.716.1 (mRNA) Pleurocladia lacustris SAG_25_93
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Overview
Homology
BLAST of mRNA_P-lacustris_contig1086.716.1 vs. uniprot
Match: D7FNT6_ECTSI (Derlin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNT6_ECTSI) HSP 1 Score: 451 bits (1159), Expect = 4.970e-154 Identity = 227/294 (77.21%), Postives = 251/294 (85.37%), Query Frame = 1
Query: 1 QPRKSMPLGFVSGAGGSSPEELFRSIPPVSKVLIVGMVGTMFSIVMGLCAPLDYYLSWPLVWNKFHLWRLFTSGIFPGVPSYPSLMTIFSIGMFSMRYEKDGFSMGGGGGSADFAYMLLFGFVCIEASLLLLFYQPFLIFTEALMFYICYVWSRKNPDMSVSFWGIMINALYVPWVMVAMRVLLGSSVFMSLLGIAVGHLFYFLVDVLPDLHDIDLLQTPQFLVNMLGWGREGSGVAMQRGGGA-------------APGAXXXXXXXAVQPPRDIPRTRGGAGWGTGRTLGSS 843
Q +K+MPLG +G+GGSSPEELFRSIPPVSKVLIVGMVGT+ S+V+G+C+P Y LSWPLVWNKFHLWRLFTSG+FPG PSY +LM + S+GMFS+RYEKDGFSMGGGGGSAD+AYMLLFGFV IE SLLLLFYQPF+IFT A+MFYICYVWSRKNP MSVSFWGI+INALYVPWVMVA+RV+LG S+FM+LLGIAVGHLFYFLVDVLPDLHDIDLLQTPQFLVNMLGWG EGSGV MQ GG APGA V+PPRDIPRT GG+GWGTGRTLGSS
Sbjct: 14 QKKKNMPLGVFNGSGGSSPEELFRSIPPVSKVLIVGMVGTILSVVLGVCSPYQYALSWPLVWNKFHLWRLFTSGMFPGTPSYETLMLMISMGMFSIRYEKDGFSMGGGGGSADYAYMLLFGFVGIETSLLLLFYQPFMIFTTAIMFYICYVWSRKNPGMSVSFWGIIINALYVPWVMVALRVVLGHSIFMALLGIAVGHLFYFLVDVLPDLHDIDLLQTPQFLVNMLGWGHEGSGVTMQAGGXXXXXXXXXXXAGMPAPGA--------VRPPRDIPRTGGGSGWGTGRTLGSS 299
BLAST of mRNA_P-lacustris_contig1086.716.1 vs. uniprot
Match: A0A6H5KW67_9PHAE (Derlin n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW67_9PHAE) HSP 1 Score: 313 bits (801), Expect = 1.850e-101 Identity = 158/190 (83.16%), Postives = 169/190 (88.95%), Query Frame = 1
Query: 289 RYEKDGFSMGGGGGSADFAYMLLFGFVCIEASLLLLFYQPFLIFTEALMFYICYVWSRKNPDMSVSFWGIMINALYVPWVMVAMRVLLGSSVFMSLLGIAVGHLFYFLVDVLPDLHDIDLLQTPQFLVNMLGWGREGSGVAMQRGGGAAP-----GAXXXXXXXAVQPPRDIPRTRGGAGWGTGRTLGSS 843
RYEKDGFSMGGGGGSAD+AYMLLFGFVCIEASLLLLFYQPF+IFTEA+MFYICYVWSRKNP MSVSFWGI INALYVPWVM+AMRV +G+S+FM+LLGIAVGHLFYFLVDVLPDLH+IDLLQTPQFLVNMLGWGREGSGV MQ GGG A GA V+PPRDIPRT GG+GWGTGRTLGSS
Sbjct: 10 RYEKDGFSMGGGGGSADYAYMLLFGFVCIEASLLLLFYQPFMIFTEAIMFYICYVWSRKNPGMSVSFWGIHINALYVPWVMIAMRVAIGASIFMALLGIAVGHLFYFLVDVLPDLHEIDLLQTPQFLVNMLGWGREGSGVTMQAGGGGAAAGARAGAAGVPAPGVVRPPRDIPRTGGGSGWGTGRTLGSS 199
BLAST of mRNA_P-lacustris_contig1086.716.1 vs. uniprot
Match: A0A835YYA5_9STRA (Derlin n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYA5_9STRA) HSP 1 Score: 237 bits (604), Expect = 5.220e-71 Identity = 135/274 (49.27%), Postives = 174/274 (63.50%), Query Frame = 1
Query: 22 LGFVSGAGGSSPEELFRSIPPVSKVLIVGMVGTMFSIVMGLCAPLDYYLSWPLVWNKFHLWRLFTSGIFPGVPSYPSLMTIFSIGMFSMRYEKDGFSMGGGGGSADFAYMLLFGFVCIEASLLLLFYQPFLIFTEALMFYICYVWSRKNPDMSVSFWGIMINALYVPWVMVAMRVLLGSSVFMSLLGIAVGHLFYFLVDVLPDLHDIDLLQTPQFLVNMLGWGREGSGVAMQRGGGAAPGAXXXXXXXAVQPPRDIPRTRGGAGWGTG-RTLGS 840
+G V AG SPEE F+S+PPVSKVLI +VG+ +++G+ + L W + +KF +WRL+T+ +F G PS+P LM + G +S+RYEKD F GGGGGSAD+A+ML FG + L F PFL + LMF I YVWSRK PD+ SFWGI + ++YVPWVMVA +L G+S F LLGI VGHL+YFLVDV+PD D+L TP FL ++ G+G +GV QR APG PPR PR GG WG+G R LG+
Sbjct: 7 IGAVGAAG--SPEEWFKSLPPVSKVLITSLVGSTVLVMLGVIDAYNLALLWSPLRHKFEIWRLYTNAVFLGAPSFPFLMNLMIFGQYSIRYEKDAFDTGGGGGSADYAWMLAFGMAVLSGLSLAFFVVPFL--SIPLMFMIIYVWSRKVPDVPTSFWGITVQSVYVPWVMVAFNLLTGASAFNPLLGIGVGHLYYFLVDVVPDQFGKDVLTTPAFLTDLFGYGGLNTGV--QRF--PAPGH--------AAPPRGFPRPGGGHTWGSGGRPLGT 264
BLAST of mRNA_P-lacustris_contig1086.716.1 vs. uniprot
Match: A0A7S2XX42_9STRA (Derlin n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XX42_9STRA) HSP 1 Score: 177 bits (449), Expect = 3.620e-48 Identity = 99/271 (36.53%), Postives = 161/271 (59.41%), Query Frame = 1
Query: 46 GSSPEELFRSIPPVSKVLIVGMVGTMFSIVMGLCAPLDYYLSWPLVWNKFHLWRLFTSGIFPGVPSYPSLMTIFSIGMFSMRYEKDG-FSMGGGGGSADFAYMLLFGFVCIEASLLLLFYQPFLIFTEALMFYICYVWSRKNPDMSVSF-WGIMINALYVPWVMVAMRVLLGSSVFMSLLGIAVGHLFYFLVDVLPDLHDIDLLQTPQFLVNMLGWGRE---GSGVAMQRGGGAAPGAXXXXXXXAVQPPRDIPRTRGGAGWGTGRTLGSS 843
G SP++ + S+P ++KV + + ++ G+ +L++PL+W KF WRL T+ G + +L+T + + +S +YE G F+ GGGGG +D+A+M++FG V + + PF+ + L+F++ YVWSR+ PD++VSF +G+ I ++Y PW VA ++LLG+S FM+LLGIAVGHL+YFL +++PD +D ++L+TP F+++ G+G + A QRG G QP GG WG G LG++
Sbjct: 10 GGSPQDWYNSVPFITKVWLTSTLAVTLAVNFGILPAGHLFLNFPLIWKKFQFWRLLTNFTCMGKLGFGTLITFYMLYSYSEKYETGGCFNTGGGGGVSDYAFMMMFGMVVMNIIGYFM-NTPFM--AQPLVFFVMYVWSRRFPDLTVSFMFGVKIQSIYAPWAYVAFQILLGNSPFMALLGIAVGHLYYFLAEIVPDQYDFEILKTPVFMIHYFGYGAYHPVNTAPAAQRGSVNGTGG---------QPANSSFPMPGGRQWGQGHVLGTN 268
BLAST of mRNA_P-lacustris_contig1086.716.1 vs. uniprot
Match: A0A6H5KUK6_9PHAE (Derlin n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUK6_9PHAE) HSP 1 Score: 166 bits (419), Expect = 4.100e-45 Identity = 79/105 (75.24%), Postives = 90/105 (85.71%), Query Frame = 1
Query: 16 MPLGFVSGAGGSSPEELFRSIPPVSKVLIVGMVGTMFSIVMGLCAPLDYYLSWPLVWNKFHLWRLFTSGIFPGVPSYPSLMTIFSIGMFSMRY----EKDGFSMG 318
MPLGFV+G G+SPEELFRSIPPVSKVLI+GMVGTMFSIV+G+C+P +Y LSWPLVWNKFHLWRLFTSGIFPG P Y +LM+IFSIGMFS+R+ EK F G
Sbjct: 1 MPLGFVNGGSGNSPEELFRSIPPVSKVLILGMVGTMFSIVLGVCSPYEYALSWPLVWNKFHLWRLFTSGIFPGKPGYGALMSIFSIGMFSIRWSGHQEKSFFGAG 105
BLAST of mRNA_P-lacustris_contig1086.716.1 vs. uniprot
Match: A0A7S0SWB6_9STRA (Derlin n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SWB6_9STRA) HSP 1 Score: 167 bits (424), Expect = 1.640e-44 Identity = 91/268 (33.96%), Postives = 154/268 (57.46%), Query Frame = 1
Query: 46 GSSPEELFRSIPPVSKVLIVGMVGTMFSIVMGLCAPLDYYLSWPLVWNKFHLWRLFTSGIFPGVPSYPSLMTIFSIGMFSMRYEKDGFSMGGGGGSADFAYMLLFGFVCIEASLLLLFYQPFLIFTEALMFYICYVWSRKNPDMSVSFWGIMINALYVPWVMVAMRVLLGSSVFMSLLGIAVGHLFYFLVDVLPDLHDIDLLQTPQFLVNMLGWGREGSGVAMQRGGGAAPGAXXXXXXXAVQPPRD--IPRTRGGAGWGTGRTLGSS 843
G S ++ + +IP V+KVLI V + L P D L W +W+KFH+WRLFT +F G S+ LM + S++YE + ++ GGGG SAD+ Y++++ V + L++ +Y F+I ++ LM+ I YVWSR+ + V+ +G LY+PW+ + + +L+G+S+ L+GIAVGH +YFL++V+P ++++DL++TP+F ++++ + + + P A P R P G WG GR LG++
Sbjct: 11 GDSIQDWYNNIPFVTKVLITSTVVIGGLLTFQLIPPQDLILDWRFIWHKFHIWRLFTPFVFAGSFSFNFLMHTVVLYQNSLKYENNPYNTGGGGSSADYLYLIIYSIVLL---LVIAYYMNFMILSDPLMYVIVYVWSRRESESVVNMYGFKFKGLYLPWIYIGISMLMGNSIVPPLIGIAVGHSYYFLIEVMPTIYNVDLIRTPKFCIDIITYSTGRTPNVLSN----IPIPNLAAAPNAGAPVRGNGFPNLGTGHNWGRGRVLGAN 271
BLAST of mRNA_P-lacustris_contig1086.716.1 vs. uniprot
Match: A0A7S2SNX6_9STRA (Derlin n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SNX6_9STRA) HSP 1 Score: 159 bits (403), Expect = 1.430e-41 Identity = 94/276 (34.06%), Postives = 148/276 (53.62%), Query Frame = 1
Query: 16 MPLGFVSGAGGSSPEELFRSIPPVSKVLIVGMVGTMFSIVMGLCAPLDYYLSWPLVWNKFHLWRLFTSGIFPGVPSYPSLMTIFSIGMFSMRYEKDGFSMGGGGGSADFAYMLLFGFVCIEASLLLLFYQ-PFLIFTEALMFYICYVWSRKNPDMSVSFWGIMINALYVPWVMVAMRVLLGSSVFMSLLGIAVGHLFYFLVDVLPDLHDIDLLQTPQFLVNMLGWGREGSGVAMQRGGGAAPGAXXXXXXXAVQPPRDIPRTRGGAGWGTGRTLGS 840
M G G++P+E F S+PP+++ L+V ++ T + G+ +P +L W VW F +WRL ++ +F G S+P L+ ++ + ++ RYE F+ G GG SADFA+ML G C ++ F+ PF+ + + F I YVW+RKNPD S + A Y+PW M+A +L+G+ +++ L+GIA GH++YFL P D+++TP F++ +LG G R AP A A R G WG+G LG+
Sbjct: 1 MMRGMGRVGDGNTPQEWFYSLPPITRSLLVAVLATTAACSFGIVSPFQLHLDWTRVWRGFEIWRLASNFVFFGTFSFPFLINLYLLVQYASRYEVSPFNTGAGGSSADFAWMLTIG--CSLLAIASYFFGLPFM--GQPMSFMIMYVWTRKNPDEMTSIFFFKFQAFYLPWAMLAFNLLIGNDIYLPLMGIAAGHVYYFLHYTAPAELGRDIIKTPTFMIELLGGTPTTPGSFRPR---TAPTAPRAAAGGAAA------RPYAGHNWGSGNVLGA 263
BLAST of mRNA_P-lacustris_contig1086.716.1 vs. uniprot
Match: A0A482RVM1_9ARCH (Uncharacterized protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RVM1_9ARCH) HSP 1 Score: 156 bits (394), Expect = 1.520e-40 Identity = 81/212 (38.21%), Postives = 127/212 (59.91%), Query Frame = 1
Query: 46 GSSPEELFRSIPPVSKVLIVGMVGTMFSIVMGLCAPLDYYLSWPLVWNKFHLWRLFTSGIFPGVPSYPSLMTIFSIGMFSMRYEKDGFSMGGGGGSADFAYMLLFGFVCIEASLLLLFYQPFLIFTEALMFYICYVWSRKNPDMSVSFWGIMINALYVPWVMVAMRVLLGSSVFMSLLGIAVGHLFYFLVDVLPDLHDIDLLQTPQFLVNML 681
G + + F S+P ++KV +V + T + + L WP V NKFH WRLFT +F G S+ + + RYE + F+ G GG SADF ++LL + + L+L + + +E L++ I YVWSR+ PD ++ WG ALY+PWV +A+R+++G ++ L+G+AVGHL+YFLV VLP H +DL++TP+F V+++
Sbjct: 5 GDTLQGWFSSVPLITKVFLVSTLITGAGLSFKMLDGGSLVLLWPYVQNKFHFWRLFTCFVFAGPFSFNFALHTLVLYENCKRYESNPFNTGAGGNSADFLWLLL---IAMTVLLVLAYIFDMYVLSEPLLYVIMYVWSRREPDAMLNIWGFRFKALYLPWVYIAIRMVMGGAITEPLIGVAVGHLYYFLVQVLPATHGVDLIKTPKFCVDIV 213
BLAST of mRNA_P-lacustris_contig1086.716.1 vs. uniprot
Match: A0A8J2WZQ4_9STRA (Derlin n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WZQ4_9STRA) HSP 1 Score: 155 bits (393), Expect = 4.200e-40 Identity = 103/276 (37.32%), Postives = 158/276 (57.25%), Query Frame = 1
Query: 22 LGFVSGAGGSSP-EELFRSIPPVSKVLIVGMVGTMFSIVMGLCAPLDYYLSWPLVWNKFHLWRLFTSGIFPGVPSYPSLMTIFSIGMFSMRYEKDGFSMGGGGGSADFAYMLLFGFVCIEASLLLLFYQPFL---IFTEALMFYICYVWSRKNPDMSVSFWGIMINALYVPWVMVAMRVLLGSSVFMSLLGIAVGHLFYFLVDVLPDLHDIDLLQTPQFLVNMLGWGREGSGVAMQRGGGAAPGAXXXXXXXAVQPPRDIPRTRGGAGWGTGRTLG 837
LG V G G ++P ++ S+PPV++V V GT I GL P SWP V ++F +WRL T F G S+P L+ ++ + +S YE ++ GGGG +AD+ +M+ G +L+L F+ +A+++ + YVWSR+NP VS +G + A+ +PW + A +++G+S+ + L+GI VGHL+YF ++VLPD + +D+++TP+ L++ G G A+ G GA XXXXXX PPR GG WG GR LG
Sbjct: 7 LGRV-GQGPANPVKDWLESLPPVTRVWFVASFGTTCLISFGLVDPYRLLWSWPAVRHRFEVWRLITPYFFFGGFSFPFLINLYLLQQYSKGYEISPYNTGGGGDTADYIWMMFLG------ALMLCGVSEFMGQVAPAQAMLYLVLYVWSRRNPTQQVSLYGFPVQAIMLPWALCAFNMVIGNSLLLPLMGIGVGHLYYFAIEVLPDAYGVDIVKTPRALIDACG-GXXXXXXAVAPG---VRGAAXXXXXXXXAPPR------GGHNWGGGRVLG 265
BLAST of mRNA_P-lacustris_contig1086.716.1 vs. uniprot
Match: A0A5D6YDW5_9STRA (Derlin n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YDW5_9STRA) HSP 1 Score: 155 bits (391), Expect = 4.700e-40 Identity = 94/260 (36.15%), Postives = 133/260 (51.15%), Query Frame = 1
Query: 58 EELFRSIPPVSKVLIVGMVGTMFSIVMGLCAPLDYYLSWPLVWNKFHLWRLFTSGIFPGVPSYPSLMTIFSIGMFSMRYEKDGFSMGGGGGSADFAYMLLFGFVCIEASLLLLFYQPFLIFTEALMFYICYVWSRKNPDMSVSFWGIMINALYVPWVMVAMRVLLGSSVFMSLLGIAVGHLFYFLVDVLPDLHDIDLLQTPQFLVNMLGWGREGSGVAMQRGGGAAPGAXXXXXXXAVQPPRDIPRTRGGAGWGTGRTLG 837
E F ++P +++ + + +G P YL + LVW+KF LWRL TS ++ G +P LM + + ++ R E+D F GGG +ADFA+ML FG V + + F+ +L+F I YVWSR+NP M V+ WG LY+PW ++A VL+G + M + G+ GHL+YFL++VLP L+QTP F NM +G GA P A P GG WGTGR LG
Sbjct: 6 EAWFHAMPTITRFYLSACFLSTCLSALGFLQPRSLYLDFDLVWHKFQLWRLPTSFMYLGGFGFPFLMQLMILNNYASRLEEDPFPSGGGP-TADFAFMLFFGAVVLWV---IAFFMALPFLGSSLIFMIVYVWSRRNPTMPVAIWGFQFEGLYLPWALIAFTVLMGGNPMMDIFGVIAGHLYYFLLEVLPTTKGWTLIQTPSFFANMF---------PSPQGTGATP------IIGARGPAGAAAAAGGGYTWGTGRPLG 246 The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig1086.716.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-lacustris_contig1086.716.1 >prot_P-lacustris_contig1086.716.1 ID=prot_P-lacustris_contig1086.716.1|Name=mRNA_P-lacustris_contig1086.716.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=277bp MPLGFVSGAGGSSPEELFRSIPPVSKVLIVGMVGTMFSIVMGLCAPLDYYback to top mRNA from alignment at P-lacustris_contig1086:17528..20508- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-lacustris_contig1086.716.1 ID=mRNA_P-lacustris_contig1086.716.1|Name=mRNA_P-lacustris_contig1086.716.1|organism=Pleurocladia lacustris SAG_25_93|type=mRNA|length=2981bp|location=Sequence derived from alignment at P-lacustris_contig1086:17528..20508- (Pleurocladia lacustris SAG_25_93)back to top Coding sequence (CDS) from alignment at P-lacustris_contig1086:17528..20508- >mRNA_P-lacustris_contig1086.716.1 ID=mRNA_P-lacustris_contig1086.716.1|Name=mRNA_P-lacustris_contig1086.716.1|organism=Pleurocladia lacustris SAG_25_93|type=CDS|length=1662bp|location=Sequence derived from alignment at P-lacustris_contig1086:17528..20508- (Pleurocladia lacustris SAG_25_93)back to top |