mRNA_P-lacustris_contig1083.704.1 (mRNA) Pleurocladia lacustris SAG_25_93
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Overview
Homology
BLAST of mRNA_P-lacustris_contig1083.704.1 vs. uniprot
Match: D7FQ19_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQ19_ECTSI) HSP 1 Score: 308 bits (788), Expect = 6.460e-95 Identity = 145/180 (80.56%), Postives = 159/180 (88.33%), Query Frame = 2
Query: 692 PPDARRTYEAEHGNCRFTAEAIRVVSALSPLVEIGAGRSHWQRGLSEAGATVISFDKWATIPGGGNNNGIPMTAGMPQVGKVLPGDEHALRLHRDKTLLLVYPPPGEMALRCLLEYRGDALVYVGEGRGGANASDEFFDSLDAEWDVAKVLELDPFPQCFEQLFLLRRQNKSVAASSPQE 1231
PPDARR YEAEHGNCR+T EAIR++SALSPLVEIGAGR HWQRGLSEAGATVISFDKWAT P GN G TAGMPQ+G+VLPGDEHALRLHRDKTLLLVYPPPG+MALRCL EYRGD LVYVGEGRGGANASDEFFD LDAEWDV +L+LDPFPQCFE+LFLLRR+ ++ +S Q+
Sbjct: 169 PPDARRRYEAEHGNCRYTPEAIRLMSALSPLVEIGAGRGHWQRGLSEAGATVISFDKWATTPSSGNERGT--TAGMPQIGRVLPGDEHALRLHRDKTLLLVYPPPGDMALRCLHEYRGDTLVYVGEGRGGANASDEFFDGLDAEWDVENILDLDPFPQCFERLFLLRRRQRTAVGASSQQ 346
BLAST of mRNA_P-lacustris_contig1083.704.1 vs. uniprot
Match: A0A061SI58_9CHLO (Uncharacterized protein n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061SI58_9CHLO) HSP 1 Score: 162 bits (409), Expect = 1.030e-40 Identity = 85/168 (50.60%), Postives = 110/168 (65.48%), Query Frame = 2
Query: 701 ARRTYEAEHGNCRFTAEAIRVVSALSPLVEIGAGRSHWQRGLSEAGATVISFDKWATIPGGGNNNGIPMTAGMPQVGKVLPGDEHALRLHRDKTLLLVYPPPGEMALRCLLEYRGDALVYVGEGRGGANASDEFFDSLDAEWDVAKVLELDPFPQCFEQLFLLRRQNK 1204
AR Y A++G ++ EAIR V+ SPL+EIGAG+ WQ LS GA +I+FD A +P +P VG+V GD LR HR +TLLL YP GEMA +CL Y G+ L+YVGEGRGG NA+DEFF L+AEW +V++L PFP FE+LF+LRR+N+
Sbjct: 152 ARARYMAKYGCAAWSEEAIRAVAGFSPLIEIGAGKGQWQAELSRRGADIIAFDNGAAVP----------CPELPAVGEVRHGDHRELRRHRGRTLLLCYPE-GEMAEQCLELYGGEWLLYVGEGRGGVNATDEFFRRLEAEWVCEQVIQLQPFPGNFERLFVLRRRNR 308
BLAST of mRNA_P-lacustris_contig1083.704.1 vs. uniprot
Match: A0A250XG93_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250XG93_9CHLO) HSP 1 Score: 164 bits (414), Expect = 1.070e-40 Identity = 77/168 (45.83%), Postives = 111/168 (66.07%), Query Frame = 2
Query: 695 PDARRTYEAEHGNCRFTAEAIRVVSALSPLVEIGAGRSHWQRGLSEAGATVISFDKWATIPGGGNNNGIPMTAGMPQVGKVLPGDEHALRLHRDKTLLLVYPPPGEMALRCLLEYRGDALVYVGEGRGGANASDEFFDSLDAEWDVAKVLELDPFPQCFEQLFLLRRQ 1198
P+AR++Y +G R+T EA++V+ + SPL+EIG G HWQ+ L+ GA V++FD + +P GM VG+V G+E +R H +TLLLVYP P +M L CL EYRG L+YVGE RGG N +++FF+ L+ EW +V+ LDPFP +EQL++L+R+
Sbjct: 217 PNARKSYLERYGCTRWTEEALQVIKSFSPLIEIGGGHGHWQKALTSIGADVLAFDDGSALP----------VLGMDNVGEVQKGNEKEIRRHPRRTLLLVYPGPTDMGLNCLNEYRGRYLLYVGEPRGGINGNEQFFNELEREWTCERVVPLDPFPDGYEQLYILKRK 374
BLAST of mRNA_P-lacustris_contig1083.704.1 vs. uniprot
Match: A9V137_MONBE (Predicted protein n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9V137_MONBE) HSP 1 Score: 144 bits (363), Expect = 8.580e-35 Identity = 72/163 (44.17%), Postives = 103/163 (63.19%), Query Frame = 2
Query: 707 RTYEAEHGNCRFTAEAIRVVSALSPLVEIGAGRSHWQRGLSEAGATVISFDKWATIPGGGNNNGIPMTAGMPQVGKVLPGDEHALRLHRDKTLLLVYPPPGEMALRCLLEYRGDALVYVGEGRGGANASDEFFDSLDAEWDVAKVLELDPFPQCFEQLFLLRR 1195
+ Y +G R+T A+ ++ SP+VE+GAG+ WQR L+EAGA V++FD +++ + P VGKV GDE L + +TLLLVYPP +MA R L Y+G L+YVGE RGG NA++EFFD+L+A+WD L PF +C+E+L++ RR
Sbjct: 124 QAYLDTYGCARWTDSALELIKEFSPIVELGAGQGQWQRALTEAGANVVAFDNESSL----------QPSNQP-VGKVYSGDEQKLGWYPYRTLLLVYPPDSDMAQRALDRYKGRYLIYVGEARGGVNANEEFFDTLEADWDCVHRENLAPFSRCYERLYVFRR 275
BLAST of mRNA_P-lacustris_contig1083.704.1 vs. uniprot
Match: A0A835Z4B6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4B6_9STRA) HSP 1 Score: 144 bits (363), Expect = 1.120e-33 Identity = 83/203 (40.89%), Postives = 113/203 (55.67%), Query Frame = 2
Query: 701 ARRTYEAEHGNCRFTAEAIRVVSALSPLVE---------IGAGRSHWQRGLSE------AGATVISFDKWATIPGGGNNNGIPMTAGMPQVGKVLPGDEHALRLHRDKTL--------LLVYPPPGEMALRCLLEYRGDALVYVGEGRGGANASDEFFDSLDAEWDVAKVLELDPFPQCFEQLFLLRRQNKSVAASSPQEIST 1240
AR YE + G R+T A+ +A SPL+E + A + G A A V++FD N + A +P VGKV PGDE AL H D+TL LLVYPPPG+MALRC+ Y GD +VYVGEGRGG NA + FF +L+ W V +V+ L+PFP+CFE++F+LRR+ + A ++ +T
Sbjct: 139 ARARYERDFGCARWTEAALAAAAAYSPLIEASNAPNILTLAAAAAAPFNGCRAXXXXXXASADVLAFD---------NGSSPQPLAALPPVGKVAPGDESALSKHPDRTLPLXXXXXLLLVYPPPGDMALRCVRAYSGDVIVYVGEGRGGVNADNAFFAALEEGWQVERVITLEPFPECFERMFILRRKPQQAADPPSKQPAT 332
BLAST of mRNA_P-lacustris_contig1083.704.1 vs. uniprot
Match: A0A7S4Q4L8_9DINO (Hypothetical protein (Fragment) n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4Q4L8_9DINO) HSP 1 Score: 140 bits (353), Expect = 1.390e-33 Identity = 69/144 (47.92%), Postives = 92/144 (63.89%), Query Frame = 2
Query: 695 PDARRTYEAEHGNCRFTAEAIRVVSALSPLVEIGAGRSHWQRGLSEAGATVISFDKWATIPGGGNNNGIPMTAGMPQVGKVLPGDEHALRLHRDKTLLLVYPPPGEMALRCLLEYRGDALVYVGEGRGGANASDEFFDSLDAEW 1126
P+ RT EHG ++T +A++V A+SPL+E+GAGR WQ+ L+E GA V+++D ++ T + +G+V G+E +R H D+ LLLVYP PG MA +CL Y GDALVYVGEGRGG N D FFD L AEW
Sbjct: 142 PEELRTRRQEHGAVKWTEKALQVAVAMSPLLEVGAGRGQWQKALTERGANVLAYDDMSSP-----------TVRLGLIGQVNRGNEEVVRRHADRALLLVYPNPGPMARKCLENYAGDALVYVGEGRGGVNGDDAFFDLLSAEW 274
BLAST of mRNA_P-lacustris_contig1083.704.1 vs. uniprot
Match: A0A7S1RWX2_ALECA (Hypothetical protein (Fragment) n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1RWX2_ALECA) HSP 1 Score: 139 bits (351), Expect = 4.140e-33 Identity = 72/171 (42.11%), Postives = 102/171 (59.65%), Query Frame = 2
Query: 692 PPDARRTYEAEHGNCRFTAEAIRVVSALSPLVEIGAGRSHWQRGLSEAGATVISFDKWATIPGGGNNNGIPMTAGMPQVGKVLPGDEHALRLHRDKTLLLVYPPPGEMALRCLLEYRGDALVYVGEGRGGANASDEFFDSLDAEWDVAKVLELDPFPQCFEQLFLLRRQNK 1204
P + RR E E+G ++T A+ A+SPLVE+GAGR WQR L+ GA V+++D ++ P T + +G+V G E +R H D+ +LLVYP PG MA CL Y GD LVYVGEGRGG N D FFD++ A+W + + +D P +E +++L+R K
Sbjct: 139 PEELRRRRE-EYGAVKWTEAALHAAVAVSPLVEVGAGRGQWQRALAGLGADVLAYDDMSS----------PSTR-LGLIGQVSQGSEDVVRRHADRAMLLVYPNPGPMAYNCLGNYAGDTLVYVGEGRGGVNGDDAFFDAVSADWKLIRSEPVDRLPGGYEHMYILQRLKK 297
BLAST of mRNA_P-lacustris_contig1083.704.1 vs. uniprot
Match: A0A812YUJ7_9DINO (Hypothetical protein n=3 Tax=Symbiodinium TaxID=2949 RepID=A0A812YUJ7_9DINO) HSP 1 Score: 138 bits (348), Expect = 6.920e-33 Identity = 74/164 (45.12%), Postives = 96/164 (58.54%), Query Frame = 2
Query: 704 RRTYEAEHGNCRFTAEAIRVVSALSPLVEIGAGRSHWQRGLSEAGATVISFDKWATIPGGGNNNGIPMTAGMPQVGKVLPGDEHALRLHRDKTLLLVYPPPGEMALRCLLEYRGDALVYVGEGRGGANASDEFFDSLDAEWDVAKVLELDPFPQCFEQLFLLRR 1195
RRT+ GN ++T A+++V SPLVE+GAG WQ L GA V +FD ++ G + V + E ALR R +TLLLVYPPPG MA+RCL Y GD L+YVGEGRGG NA FFD+L W + + + LD P +E+L+LLRR
Sbjct: 120 RRTF----GNVKWTEAALQLVERFSPLVEVGAGEGQWQSELRRRGADVTAFDDHSSPSRFGEAKSSRLVVSGADVQQA--DAEEALRRSRGRTLLLVYPPPGPMAMRCLASYTGDVLLYVGEGRGGVNADGPFFDALSVGWTLEETIGLDTLPGSYEKLYLLRR 277
BLAST of mRNA_P-lacustris_contig1083.704.1 vs. uniprot
Match: A0A812QMF7_9DINO (Hypothetical protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812QMF7_9DINO) HSP 1 Score: 133 bits (335), Expect = 2.290e-32 Identity = 75/165 (45.45%), Postives = 99/165 (60.00%), Query Frame = 2
Query: 704 RRTYEAEHGNCRFTAEAIRVVSALSPLVEIGAGRSHWQRGLSEAGATVISFDKWATIPGGGNNNGIPMTA-GMPQVGKVLPGDEHALRLHRDKTLLLVYPPPGEMALRCLLEYRGDALVYVGEGRGGANASDEFFDSLDAEWDVAKVLELDPFPQCFEQLFLLRR 1195
RRTY GN ++T A+++V+ SPLVE+GAG WQ L GA V +FD ++ G A G V + E A+R + +TLLLVYPPPG MA+RCL Y GDAL+YVGEGRGG NA FFD+L W + + +ELD P +E+L+ L+R
Sbjct: 14 RRTY----GNVKWTEAAMQLVARHSPLVEVGAGEGQWQSELRRRGADVTAFDDHSSPSRFGEGAKTSRLAVGGADVQQA--DAEEAMRRSQGRTLLLVYPPPGPMAMRCLARYAGDALLYVGEGRGGVNADGPFFDALSVGWKLEETVELDNLPGSYEKLYHLQR 172
BLAST of mRNA_P-lacustris_contig1083.704.1 vs. uniprot
Match: A0A2R5GST6_9STRA (MFS_1_like domain-containing protein n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GST6_9STRA) HSP 1 Score: 143 bits (360), Expect = 8.370e-32 Identity = 68/167 (40.72%), Postives = 114/167 (68.26%), Query Frame = 2
Query: 701 ARRTYEAEHGNCRFTAEAIRVVSALSPLVEIGAGRSHWQRGLSEAGAT-VISFDKWATIPGGGNNNGIPMTAGMPQVGKVLPGDEHALRLHRDKTLLLVYPPPGEMALRCLLEYRGDALVYVGEGRGGANASDEFFDSLDAEWDVAKVLELDPFPQCFEQLFLLRRQ 1198
AR Y +G +++ +A++ ++AL P+VE+GAG W++ L++ +I++D ++ + +P + G VL G+E LR HRD+TLLLV PPP EMA +C+ YRGD LVYVGEGRGGA+A +FF++L+++W+V +++++ PF +C+E+ F+L+R+
Sbjct: 544 ARDEYLQAYGCVKWSEQAMQKIAALGPIVELGAGYGQWRQELAQQHKVDIIAYDDYSQLY-------LPSEKAREETG-VLEGNETVLRKHRDRTLLLVCPPPNEMASKCMSAYRGDRLVYVGEGRGGAHADSDFFNTLESKWEVEEIIDVLPFSECYEKCFILKRK 702 The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig1083.704.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-lacustris_contig1083.704.1 >prot_P-lacustris_contig1083.704.1 ID=prot_P-lacustris_contig1083.704.1|Name=mRNA_P-lacustris_contig1083.704.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=230bp MMSTTLAIARWTSPISGVLAMAKPAARRTSPFRQKALPSETDQTGLWQTIback to top mRNA from alignment at P-lacustris_contig1083:30659..33523+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-lacustris_contig1083.704.1 ID=mRNA_P-lacustris_contig1083.704.1|Name=mRNA_P-lacustris_contig1083.704.1|organism=Pleurocladia lacustris SAG_25_93|type=mRNA|length=2865bp|location=Sequence derived from alignment at P-lacustris_contig1083:30659..33523+ (Pleurocladia lacustris SAG_25_93)back to top Coding sequence (CDS) from alignment at P-lacustris_contig1083:30659..33523+ >mRNA_P-lacustris_contig1083.704.1 ID=mRNA_P-lacustris_contig1083.704.1|Name=mRNA_P-lacustris_contig1083.704.1|organism=Pleurocladia lacustris SAG_25_93|type=CDS|length=1380bp|location=Sequence derived from alignment at P-lacustris_contig1083:30659..33523+ (Pleurocladia lacustris SAG_25_93)back to top |