mRNA_P-lacustris_contig1081.694.1 (mRNA) Pleurocladia lacustris SAG_25_93
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Overview
Homology
BLAST of mRNA_P-lacustris_contig1081.694.1 vs. uniprot
Match: A0A6H5KTD3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTD3_9PHAE) HSP 1 Score: 195 bits (495), Expect = 1.640e-56 Identity = 93/145 (64.14%), Postives = 109/145 (75.17%), Query Frame = 1
Query: 4 SLNITGAKHANKAKGPLDWLCKNLSDGFADKPFYEPNALGVDLPVSIHQGVAPIYREGGTKRVIEYFTEELFSRLRYKPELLLVCYDRSELVPAIKGHEQLGRTEKIGGCTLTFDPESTTPIHDHDYQPWLRANNKAARDGIAAN 438
S+ TGAKHANKA GP W+ ++ +DGFAD PFY+ +A GVDLPVSIHQGV P Y E GT VI+YF +L S+ ELL+VCYDR ELVP IKG EQLGRTEK+G C+ TFDP+ST P+ Y PWLRA+ KAARDGIAAN
Sbjct: 185 SVRNTGAKHANKAAGPGKWVREHCADGFADDPFYDADAHGVDLPVSIHQGVHPEYLEKGTAGVIDYFKRQLLSKWLQPTELLMVCYDRQELVPVIKGQEQLGRTEKLGECSRTFDPKSTDPVPSLQYGPWLRADGKAARDGIAAN 329
BLAST of mRNA_P-lacustris_contig1081.694.1 vs. uniprot
Match: A0A6H5JAK2_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAK2_9PHAE) HSP 1 Score: 191 bits (486), Expect = 3.620e-55 Identity = 91/140 (65.00%), Postives = 105/140 (75.00%), Query Frame = 1
Query: 19 GAKHANKAKGPLDWLCKNLSDGFADKPFYEPNALGVDLPVSIHQGVAPIYREGGTKRVIEYFTEELFSRLRYKPELLLVCYDRSELVPAIKGHEQLGRTEKIGGCTLTFDPESTTPIHDHDYQPWLRANNKAARDGIAAN 438
GAKHANKA GP W+ ++ +DGFAD PFY+ +A GVDLPVSIHQGV P Y E GT +I+YF +L S ELLLVCYDR ELVP IKG EQLGRTEK+G C+ TFDP+ST P+ Y PWLRA+ KAARDGIAAN
Sbjct: 244 GAKHANKAAGPGKWVREHCADGFADDPFYDADAHGVDLPVSIHQGVHPEYLEKGTAGIIDYFKRQLLSTWLQSTELLLVCYDRQELVPVIKGQEQLGRTEKLGECSRTFDPKSTDPVPSLQYGPWLRADGKAARDGIAAN 383
BLAST of mRNA_P-lacustris_contig1081.694.1 vs. uniprot
Match: A0A6H5KTG2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTG2_9PHAE) HSP 1 Score: 195 bits (495), Expect = 5.420e-55 Identity = 92/145 (63.45%), Postives = 109/145 (75.17%), Query Frame = 1
Query: 4 SLNITGAKHANKAKGPLDWLCKNLSDGFADKPFYEPNALGVDLPVSIHQGVAPIYREGGTKRVIEYFTEELFSRLRYKPELLLVCYDRSELVPAIKGHEQLGRTEKIGGCTLTFDPESTTPIHDHDYQPWLRANNKAARDGIAAN 438
S+ TGAKHANKA GP W+ ++ +DGFAD PFY+ +A GVDLPVSIHQGV P Y E GT +I+YF +L S+ ELL+VCYDR ELVP IKG EQLGRTEK+G C+ TFDP+ST P+ Y PWLRA+ KAARDGIAAN
Sbjct: 328 SVRNTGAKHANKAAGPGKWVREHCADGFADDPFYDADAHGVDLPVSIHQGVHPEYLEKGTAGIIDYFKRQLLSKWLQSTELLMVCYDRQELVPVIKGQEQLGRTEKLGECSRTFDPKSTDPVPSLQYGPWLRADGKAARDGIAAN 472
BLAST of mRNA_P-lacustris_contig1081.694.1 vs. uniprot
Match: A0A6H5L6D9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6D9_9PHAE) HSP 1 Score: 192 bits (487), Expect = 7.740e-54 Identity = 90/140 (64.29%), Postives = 106/140 (75.71%), Query Frame = 1
Query: 19 GAKHANKAKGPLDWLCKNLSDGFADKPFYEPNALGVDLPVSIHQGVAPIYREGGTKRVIEYFTEELFSRLRYKPELLLVCYDRSELVPAIKGHEQLGRTEKIGGCTLTFDPESTTPIHDHDYQPWLRANNKAARDGIAAN 438
GAKHANKA GP W+ ++ +DGFAD PFY+ +A GVDLPVSIHQGV P Y E GT +I+YF +L S+ ELL+VCYDR ELVP IKG EQLGRTEK+G C+ TFDP+ST P+ Y PWLRA+ KAARDGIAAN
Sbjct: 1352 GAKHANKAAGPGKWVREHCADGFADDPFYDADAHGVDLPVSIHQGVHPEYLEKGTAGIIDYFKRQLLSKWLQSTELLMVCYDRQELVPVIKGQEQLGRTEKLGECSRTFDPKSTDPVPSLQYGPWLRADGKAARDGIAAN 1491
BLAST of mRNA_P-lacustris_contig1081.694.1 vs. uniprot
Match: A0A6H5JZK8_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZK8_9PHAE) HSP 1 Score: 176 bits (445), Expect = 3.330e-53 Identity = 86/143 (60.14%), Postives = 100/143 (69.93%), Query Frame = 1
Query: 10 NITG-AKHANKAKGPLDWLCKNLSDGFADKPFYEPNALGVDLPVSIHQGVAPIYREGGTKRVIEYFTEELFSRLRYKPELLLVCYDRSELVPAIKGHEQLGRTEKIGGCTLTFDPESTTPIHDHDYQPWLRANNKAARDGIAA 435
N+TG AKHANKA GP W+ ++ +DGFAD FY+ +A G+DLP SIHQGV P Y E GT I+YF +L ELLLVCYDR ELVP IKG EQLGRTEK G C+ T DP+ST + Y PWLRA+ KAARDGIAA
Sbjct: 34 NVTGGAKHANKAAGPRKWVREHCADGFADDSFYDADAHGMDLPASIHQGVHPEYLENGTAGTIDYFKRQLLPNWLQSTELLLVCYDRQELVPVIKGQEQLGRTEKFGECSRTSDPKSTDLVPSLQYGPWLRADGKAARDGIAA 176
BLAST of mRNA_P-lacustris_contig1081.694.1 vs. uniprot
Match: A0A6H5KXZ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXZ6_9PHAE) HSP 1 Score: 179 bits (453), Expect = 5.470e-53 Identity = 84/139 (60.43%), Postives = 102/139 (73.38%), Query Frame = 1
Query: 19 GAKHANKAKGPLDWLCKNLSDGFADKPFYEPNALGVDLPVSIHQGVAPIYREGGTKRVIEYFTEELFSRLRYKPELLLVCYDRSELVPAIKGHEQLGRTEKIGGCTLTFDPESTTPIHDHDYQPWLRANNKAARDGIAA 435
GAKHA KA GP W+ ++ +DGFA+ P Y+ +A GVDLPVSIHQG+ P Y E GT +I+YF +L S+ E LLVCYDR +LVP IKG EQLGRTEK+G C+ TFDP+ST P+ Y PWLRA+ KAARDGIAA
Sbjct: 38 GAKHATKAAGPGKWVREHCADGFAEDPSYDADARGVDLPVSIHQGMRPEYLEKGTAGIIDYFKRQLLSKWLQSTEPLLVCYDRQDLVPVIKGQEQLGRTEKLGVCSRTFDPKSTDPVPSLQYGPWLRADGKAARDGIAA 176
BLAST of mRNA_P-lacustris_contig1081.694.1 vs. uniprot
Match: A0A6H5JHH4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHH4_9PHAE) HSP 1 Score: 184 bits (467), Expect = 5.430e-52 Identity = 86/139 (61.87%), Postives = 103/139 (74.10%), Query Frame = 1
Query: 19 GAKHANKAKGPLDWLCKNLSDGFADKPFYEPNALGVDLPVSIHQGVAPIYREGGTKRVIEYFTEELFSRLRYKPELLLVCYDRSELVPAIKGHEQLGRTEKIGGCTLTFDPESTTPIHDHDYQPWLRANNKAARDGIAA 435
G KHA+KA GP W+ ++ +DGFAD PF++ +A GVDLPVSIHQGV P Y E GT +I+YF +L S+ EL LVCYDR ELVP IKG EQLGRTEK+G C+ TFDP+ST P+ Y PWLRA+ KAARDGIAA
Sbjct: 7 GVKHASKAAGPRKWVREHCADGFADDPFFDADAHGVDLPVSIHQGVHPEYLEKGTAGIIDYFKRQLLSKWLQSTELFLVCYDRQELVPVIKGQEQLGRTEKLGECSRTFDPKSTGPVPSLQYGPWLRADGKAARDGIAA 145
BLAST of mRNA_P-lacustris_contig1081.694.1 vs. uniprot
Match: A0A6H5JUY6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUY6_9PHAE) HSP 1 Score: 179 bits (453), Expect = 1.190e-51 Identity = 91/145 (62.76%), Postives = 103/145 (71.03%), Query Frame = 1
Query: 7 LNITG-AKHANKAKGPLDWLCKNLSDGFADKPFYEPNALGVDLPVSIHQGVAPIYREGGTKRVIEYFTEELFSRLRYKPELLLVCYDRSELVPAIKGHEQLGRTEKIGGCTLTFDPESTTPIHDHDYQPWLRANNKAARDGIAAN 438
+N TG AKHANK+ GP WL + SD D+PFY A GVDLPVSIHQGV EGG VI YF EL SR R + +LLLVCYDR++LVPAIKG EQ GRT+KIGGCTL+F+P ST PI YQ WLR N KAARD IAA+
Sbjct: 41 VNATGGAKHANKSAGPTKWLQDHSSDAVTDEPFYTACAHGVDLPVSIHQGVRQRDLEGGAHGVINYFVSELDSRWRMEADLLLVCYDRAQLVPAIKGREQSGRTDKIGGCTLSFEPTSTDPIPPSQYQSWLRDNQKAARDCIAAH 185
BLAST of mRNA_P-lacustris_contig1081.694.1 vs. uniprot
Match: A0A6H5JT24_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT24_9PHAE) HSP 1 Score: 183 bits (464), Expect = 1.260e-51 Identity = 87/143 (60.84%), Postives = 105/143 (73.43%), Query Frame = 1
Query: 10 NITGAKHANKAKGPLDWLCKNLSDGFADKPFYEPNALGVDLPVSIHQGVAPIYREGGTKRVIEYFTEELFSRLRYKPELLLVCYDRSELVPAIKGHEQLGRTEKIGGCTLTFDPESTTPIHDHDYQPWLRANNKAARDGIAAN 438
N TGAKHANKA PL W+ ++ +DGFA PFY +A GVDLPVSIHQGV P Y E GT +I+YF ++ FS+ EL +VCYDR ELVPAI+GHEQLGRTE +G C+ TFDP+ST P+ + WLR + KAARDGIAAN
Sbjct: 24 NATGAKHANKAADPLKWVREHCADGFAVDPFYGADAHGVDLPVSIHQGVHPEYLEKGTAGIIDYFKKQFFSKWLKSTELFVVCYDRQELVPAIRGHEQLGRTETLGECSRTFDPKSTDPVPLLHHGSWLRVDGKAARDGIAAN 166
BLAST of mRNA_P-lacustris_contig1081.694.1 vs. uniprot
Match: A0A6H5KG39_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KG39_9PHAE) HSP 1 Score: 180 bits (456), Expect = 8.300e-51 Identity = 89/140 (63.57%), Postives = 100/140 (71.43%), Query Frame = 1
Query: 19 GAKHANKAKGPLDWLCKNLSDGFADKPFYEPNALGVDLPVSIHQGVAPIYREGGTKRVIEYFTEELFSRLRYKPELLLVCYDRSELVPAIKGHEQLGRTEKIGGCTLTFDPESTTPIHDHDYQPWLRANNKAARDGIAAN 438
GAKHANK+ GP WL + S+ AD+PFY A GVDLPVSIHQGV EGG VI YF EL SR R + +LLLVCYDR++LVPAIKG EQ GRT+KIGGCTL+FDP S PI YQ WLR N KAARDG AA+
Sbjct: 44 GAKHANKSAGPTKWLQDHSSNAVADEPFYTACAHGVDLPVSIHQGVRQRDLEGGAHGVINYFVSELDSRWRMEADLLLVCYDRAQLVPAIKGREQSGRTDKIGGCTLSFDPTSMDPIPQSQYQSWLRDNQKAARDGFAAH 183 The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig1081.694.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-lacustris_contig1081.694.1 >prot_P-lacustris_contig1081.694.1 ID=prot_P-lacustris_contig1081.694.1|Name=mRNA_P-lacustris_contig1081.694.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=146bp MSLNITGAKHANKAKGPLDWLCKNLSDGFADKPFYEPNALGVDLPVSIHQback to top mRNA from alignment at P-lacustris_contig1081:27977..28414+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-lacustris_contig1081.694.1 ID=mRNA_P-lacustris_contig1081.694.1|Name=mRNA_P-lacustris_contig1081.694.1|organism=Pleurocladia lacustris SAG_25_93|type=mRNA|length=438bp|location=Sequence derived from alignment at P-lacustris_contig1081:27977..28414+ (Pleurocladia lacustris SAG_25_93)back to top Coding sequence (CDS) from alignment at P-lacustris_contig1081:27977..28414+ >mRNA_P-lacustris_contig1081.694.1 ID=mRNA_P-lacustris_contig1081.694.1|Name=mRNA_P-lacustris_contig1081.694.1|organism=Pleurocladia lacustris SAG_25_93|type=CDS|length=876bp|location=Sequence derived from alignment at P-lacustris_contig1081:27977..28414+ (Pleurocladia lacustris SAG_25_93)back to top |