mRNA_P-lacustris_contig107.620.1 (mRNA) Pleurocladia lacustris SAG_25_93

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-lacustris_contig107.620.1
Unique NamemRNA_P-lacustris_contig107.620.1
TypemRNA
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Homology
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BLAST of mRNA_P-lacustris_contig107.620.1 vs. uniprot
Match: A0A6H5KKC3_9PHAE (LHCP protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KKC3_9PHAE)

HSP 1 Score: 392 bits (1008), Expect = 6.950e-137
Identity = 200/234 (85.47%), Postives = 215/234 (91.88%), Query Frame = 3 
Query:   12 MKCATAFALMMASANAFVPSAPLAKLTTSRTSSSSLEMIFSMGKKSKAPVKSKAKARAVSTNAVEGLVGADIETGGPFDPLGFGKNCPPEQMQWYRAAELKHGRICMLAALGQITQHFTHWNDPSGIFDKSGSAWGAMQQVYEQRPFAFLQIMLAIFAVEVYGNRKQQESPSGGDLGFDPLGLRPSGAEAWERVQLRELKNGRLAMFAILGMIVQEHITGVGVLEKVDALAGLA 713
            MKCATAFALM+ASANAFVPSAPL  +T SR SSSSL+MI   G+KSK P      AR VSTNAV+GLVGADIETGGPFDPLGFGKNCPP+QMQWYRAAELKHGR+CMLAA GQITQHFTHWNDPSGIFDKSGSAWGAMQQVYEQRPFAFLQI+LAIFAVEVYGN++Q+E+ +GGDLGFDPLGL+PS  EAWERVQLRELKNGRLAMFAILGMIVQEHITGVGVLEKVD+LAGLA
Sbjct:    1 MKCATAFALMVASANAFVPSAPLPTVT-SRASSSSLQMIGGFGRKSK-PAPKAPPARPVSTNAVDGLVGADIETGGPFDPLGFGKNCPPQQMQWYRAAELKHGRVCMLAAFGQITQHFTHWNDPSGIFDKSGSAWGAMQQVYEQRPFAFLQIILAIFAVEVYGNKRQEENEAGGDLGFDPLGLKPSNPEAWERVQLRELKNGRLAMFAILGMIVQEHITGVGVLEKVDSLAGLA 232
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BLAST of mRNA_P-lacustris_contig107.620.1 vs. uniprot
Match: A0A0G4GYX1_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4GYX1_VITBC)

HSP 1 Score: 182 bits (463), Expect = 2.760e-54
Identity = 95/173 (54.91%), Postives = 121/173 (69.94%), Query Frame = 3 
Query:  186 VSTNAVEGLVGADIETGGPFDPLGFGKNCPPEQMQWYRAAELKHGRICMLAALGQITQHFTHWNDPSGIFDKSGSAWGAMQQVYEQRPFAFLQIMLAIFAVEVYGNRKQQE-SPSGGDLGFDPLGLRPSGAEAWERVQLRELKNGRLAMFAILGMIVQEHITGVGVLEKVDAL 701
            + TNA +GL+G+D+E    FDPLGF  N   E ++WYRAAELKHGR+CMLAALGQ+ Q F H  DPSG+FD + S++GA  +V  +RP+A +QI+LAIFAVEV G + Q +   + GDL FDP  +R    E WE  QLRELKNGRLAM  I  M+VQE I+G GV+ +   L
Sbjct:   46 LGTNA-QGLIGSDLEWP-EFDPLGFTNNISDETLEWYRAAELKHGRVCMLAALGQLVQSFWHLPDPSGVFDSTDSSFGAFNKVVSERPWAAIQILLAIFAVEVLGAKTQAKPGQAPGDLDFDPFKVRSDDPEIWEATQLRELKNGRLAMIGITAMLVQEAISGKGVIAQWQGL 216
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BLAST of mRNA_P-lacustris_contig107.620.1 vs. uniprot
Match: A0A835YT25_9STRA (Light harvesting complex protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835YT25_9STRA)

HSP 1 Score: 180 bits (457), Expect = 2.290e-53
Identity = 93/166 (56.02%), Postives = 117/166 (70.48%), Query Frame = 3 
Query:  204 EGLVGADIETGGPFDPLGFGKNCPPEQMQWYRAAELKHGRICMLAALGQITQHFTHWNDPSGIFDKSGSAWGAMQQVYEQRPFAFLQIMLAIFAVEVYGNRKQQE-SPSGGDLGFDPLGLRPSGAEAWERVQLRELKNGRLAMFAILGMIVQEHITGVGVLEKVDA 698
            EGLVG+D+E    +DPLGF  N  P+ + WYRAAELKHGR+ MLAALG+I Q + H  DP  +F +S   W A+QQVY +RP A  QI+LAIFA E  G  +Q +   + GDL +DPL L+PS  E WE+VQLRELKNGRLAM AI G  VQE++TG G +E++ A
Sbjct:   45 EGLVGSDLELA-TWDPLGFTNNQNPDTINWYRAAELKHGRVAMLAALGEIFQSYYHLPDP--VFSQSARPWDALQQVYAERPLAVAQILLAIFACEAIGQAQQAKPGQAPGDLNWDPLNLKPSDPETWEKVQLRELKNGRLAMMAIAGFFVQENLTGQGPIEQIYA 207
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BLAST of mRNA_P-lacustris_contig107.620.1 vs. uniprot
Match: FCP_CHAMQ (Fucoxanthin-chlorophyll a-c binding protein, chloroplastic n=1 Tax=Chattonella marina var. antiqua TaxID=859642 RepID=FCP_CHAMQ)

HSP 1 Score: 173 bits (438), Expect = 1.580e-50
Identity = 92/165 (55.76%), Postives = 114/165 (69.09%), Query Frame = 3 
Query:  195 NAVEGLVGADIETGGPFDPLGFGKNCPPEQMQWYRAAELKHGRICMLAALGQITQHFTHWNDPSGIFDKSGSAWGAMQQVYEQRPFAFLQIMLAIFAVEVYGNRKQQE-SPSGGDLGFDPLGLRPSGAEAWERVQLRELKNGRLAMFAILGMIVQEHITGVGVLE 686
            ++ EGL+G+D+E    FDPLGF  N  P  ++WYRAAELKHGR+ MLAALGQ+ Q F H  DP  +F +S   W A+ +V  +RP A +QI LAIFA E  G   Q +   + GDLG+DPL LR S  E +ER QLRELKNGRLAM AI  MIVQE++TG GV+E
Sbjct:   40 SSAEGLIGSDLELP-EFDPLGFTNNPAPGALEWYRAAELKHGRVAMLAALGQLVQSFYHLPDP--VFSESAKPWQALVKVCNERPLAAVQIGLAIFACEAIGQANQAKPGQAAGDLGWDPLNLRGSNEEIFERAQLRELKNGRLAMIAITAMIVQENLTGYGVIE 201
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BLAST of mRNA_P-lacustris_contig107.620.1 vs. uniprot
Match: A0A0G4GRR2_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4GRR2_9ALVE)

HSP 1 Score: 170 bits (431), Expect = 1.370e-49
Identity = 109/229 (47.60%), Postives = 138/229 (60.26%), Query Frame = 3 
Query:   21 ATAFALMMASANAFVPSAP-LAKLTTSRTSSSSLEMIFSMGKKSKAPVKSKAKARAVSTNAVEGLVGADIETGGPFDPLGFGKNCPPEQMQWYRAAELKHGRICMLAALGQITQHFTHWNDPSGIFDKSGSAWGAMQQVYEQRPFAFLQIMLAIFAVEVYGNRKQQE-SPSGGDLGFDPLGLRPSGAEAWERVQLRELKNGRLAMFAILGMIVQEHITGVGVLEKVDAL 701
            A A +L ++S  AFVPS+  L     SR+  SSL+M                    +  NAV G+ G D E    FDP+GF +N P E ++WYRAAELKHGR+CMLAALG I    TH   P   F+  GS  GA+ ++ E+RP+A LQI+LAIFAVE  G + Q E    GGDLGFDPLGL+PS  E  E  QLRE+KNGRLAM AILG   QE++T   +++  D +
Sbjct:    5 AVALSLSVSSCTAFVPSSNGLLSSRPSRSGKSSLDM-------------------KLGRNAV-GMPGTDFELP-DFDPIGFTQNAPLETLEWYRAAELKHGRVCMLAALGNIVAGITHL--PDTCFEGKGSL-GAVYKIMEERPWAGLQIVLAIFAVEALGQKIQSEPGREGGDLGFDPLGLKPSDPELLEATQLREIKNGRLAMIAILGQWAQEYVTNRPIIDFDDVV 209
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BLAST of mRNA_P-lacustris_contig107.620.1 vs. uniprot
Match: W7TCK1_9STRA (Chloroplast light harvesting protein isoform 4 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TCK1_9STRA)

HSP 1 Score: 168 bits (426), Expect = 1.050e-48
Identity = 90/166 (54.22%), Postives = 113/166 (68.07%), Query Frame = 3 
Query:  195 NAVEGLVGADIETGGPFDPLGFGKNCPPEQMQWYRAAELKHGRICMLAALGQITQHFTHWNDPSGIFDKSGSAWGAMQQVYEQRPFAFLQIMLAIFAVEVYGNRKQQE-SPSGGDLGFDPLGLRPSGAEAWERVQLRELKNGRLAMFAILGMIVQEHITGVGVLEK 689
            ++ +GL G+DIE    FDPLGF  N  PE + WYRAAELKHGR+ MLAALGQI QHF    D SG+F        A+ +V  +RP A +QI LAIFAVE  G   Q +   + GDLG+DPL L+    E + +VQ RELKNGRLAM AI GM+VQE++TG+GV+E+
Sbjct:   39 SSAQGLAGSDIEFP-EFDPLGFTNNPKPETLDWYRAAELKHGRVAMLAALGQIVQHFYTLPDASGVFSAGDRPIEALNKVVAERPLAAIQIGLAIFAVEALGQFNQAKPGQAPGDLGWDPLNLKSDDPEIYAKVQNRELKNGRLAMIAIAGMLVQENLTGLGVIEQ 203
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BLAST of mRNA_P-lacustris_contig107.620.1 vs. uniprot
Match: A0A835Z156_9STRA (Light harvesting complex protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z156_9STRA)

HSP 1 Score: 150 bits (379), Expect = 1.120e-41
Identity = 83/178 (46.63%), Postives = 113/178 (63.48%), Query Frame = 3 
Query:  177 ARAVSTNAVE----GLVGADIETGGPFDPLGFGKNCPPEQMQWYRAAELKHGRICMLAALGQITQHFTHWNDPSGIFDKSGSAWGAMQQVYEQRPFAFLQIMLAIFAVEVYGNRKQQESPSGGDLGFDPLGLRPSGAEAWERVQLRELKNGRLAMFAILGMIVQEHITGVGVLEKVDA 698
            AR  S++A++    GLVGA +ETGG +DP         E + WYRAAELKHGR+CMLAA+G + Q +  W  P  +F  +  A  A+ Q+Y +RP A  QI+LAI A+EV G+  Q+ +  G DL +DPLGL P   E    +QL+ELKNGRLAM A  G  +QE +TG G +E++ +
Sbjct:   30 ARVASSSAMQMSADGLVGASVETGGVWDPANLASKASEEDLAWYRAAELKHGRVCMLAAVGCLVQGY--WQLPDPVFSNT-KAVDAVAQIYTERPGAIYQILLAIAAIEVLGSSIQKYTAPG-DLKWDPLGLAPEDPEELATLQLKELKNGRLAMVATAGFFLQEALTGQGAVEQITS 203
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BLAST of mRNA_P-lacustris_contig107.620.1 vs. uniprot
Match: A0A7S4UG07_9DINO (Hypothetical protein n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4UG07_9DINO)

HSP 1 Score: 146 bits (368), Expect = 6.680e-41
Identity = 79/133 (59.40%), Postives = 96/133 (72.18%), Query Frame = 3 
Query:  291 WYRAAELKHGRICMLAALGQITQHFTHWNDPSGIFDKSGSAWGAMQQVYEQRPFAFLQIMLAIFAVEVYGNRKQ-QESPSGGDLGFDPLGLRPSGAEAWERVQLRELKNGRLAMFAILGMIVQEHITGVGVLE 686
            WYRAAELKHGR+ MLAALGQI Q F    DP  +F +  + W AM +VYE+RP A +QI+LA FA E  G   Q +   + GDLGFDPL L+ +  E +ERVQLRELKNGRLAM+AI  MIVQE++TG GV+E
Sbjct:    1 WYRAAELKHGRVAMLAALGQIFQSFYTLPDP--VFAEKANPWQAMIKVYEERPLAMVQILLAAFACEAAGAFIQARPGQAPGDLGFDPLNLKSNDPEIFERVQLRELKNGRLAMWAIAAMIVQENLTGYGVIE 131
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BLAST of mRNA_P-lacustris_contig107.620.1 vs. uniprot
Match: A0A0G4F0S3_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4F0S3_VITBC)

HSP 1 Score: 148 bits (373), Expect = 1.020e-40
Identity = 76/162 (46.91%), Postives = 110/162 (67.90%), Query Frame = 3 
Query:  207 GLVGADIETGGPFDPLGFGKNCPPEQMQWYRAAELKHGRICMLAALGQITQHFTHWNDPSGIFDKSGSAWGAMQQVYEQRPFAFLQIMLAIFAVEVYGNRKQQESPSGGDLGFDPLGLRPSGAEAWERVQLRELKNGRLAMFAILGMIVQEHITGVGVLEKV 692
            GLVG DI+    FDPLG  K    E ++WYRAAELKHGR+ MLAALG + Q+   +  P   F ++     A+ +++ +RP A +QI+ AI A+EV GN+ Q ++  GGDL +DPLG++P+  E + ++QLRELKNGRLAM ++LGM  QE +T  G ++++
Sbjct:   56 GLVGNDIDAPN-FDPLGLSKTADDETLKWYRAAELKHGRVAMLAALGFLVQNI--YQLPDSPFQEANPI-NAVYKLWSERPLAIMQILTAIAAIEVLGNQVQLQTEDGGDLKWDPLGIKPNDPEEFRKMQLRELKNGRLAMISVLGMTAQEALTDQGPIDQI 213
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BLAST of mRNA_P-lacustris_contig107.620.1 vs. uniprot
Match: A0A0G4ESK4_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4ESK4_VITBC)

HSP 1 Score: 144 bits (364), Expect = 2.860e-39
Identity = 88/169 (52.07%), Postives = 111/169 (65.68%), Query Frame = 3 
Query:  207 GLVGADIETGGPFDP--LGFGKNCPPEQMQWYRAAELKHGRICMLAALGQITQHFTHWNDPSGIFDKSGSAWGAMQQVYEQRPFAFLQIMLAIFAVEVYG-NRKQQESPSGGDLGFDPLGLRP-----SGAEAWERVQLRELKNGRLAMFAILGMIVQEHITGVGVLEK 689
            GLVG+DIE    FDP  L  G +  PE + WYRAAELKHGRICMLAALG  TQ      DPSG+F ++     A+ +V  +RP A +Q++LAI A+EV   NR    +P  GDLGFDPL L+      S  EA+E++QLRELKNGRLAM A  GM++Q+ +TG   LE+
Sbjct:   50 GLVGSDIEAPN-FDPWKLAAG-DLEPETLSWYRAAELKHGRICMLAALGLTTQEVVQLPDPSGVFSETKGI-PALVKVANERPGAIIQLLLAIGAIEVAALNRADSAAP--GDLGFDPLNLQQKLGLASNPEAFEKMQLRELKNGRLAMVATAGMLIQQFLTGQATLEQ 213
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig107.620.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KKC3_9PHAE6.950e-13785.47LHCP protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A... [more]
A0A0G4GYX1_VITBC2.760e-5454.91Uncharacterized protein n=1 Tax=Vitrella brassicaf... [more]
A0A835YT25_9STRA2.290e-5356.02Light harvesting complex protein n=2 Tax=Tribonema... [more]
FCP_CHAMQ1.580e-5055.76Fucoxanthin-chlorophyll a-c binding protein, chlor... [more]
A0A0G4GRR2_9ALVE1.370e-4947.60Uncharacterized protein n=1 Tax=Chromera velia CCM... [more]
W7TCK1_9STRA1.050e-4854.22Chloroplast light harvesting protein isoform 4 n=2... [more]
A0A835Z156_9STRA1.120e-4146.63Light harvesting complex protein n=1 Tax=Tribonema... [more]
A0A7S4UG07_9DINO6.680e-4159.40Hypothetical protein n=1 Tax=Alexandrium monilatum... [more]
A0A0G4F0S3_VITBC1.020e-4046.91Uncharacterized protein n=2 Tax=Vitrella brassicaf... [more]
A0A0G4ESK4_VITBC2.860e-3952.07Uncharacterized protein n=1 Tax=Vitrella brassicaf... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig107contigP-lacustris_contig107:151421..156568 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score102.1
Seed ortholog evalue3.7e-19
Seed eggNOG ortholog227086.JGI_V11_68615
KEGG koko:K08914
KEGG Pathwayko00196,ko01100,map00196,map01100
Hectar predicted targeting categorychloroplast
EggNOG free text desc.Chlorophyll A-B binding protein
EggNOG OGs2BEWM@1,2S15M@2759
Ec32 ortholog descriptionLight harvesting complex protein
Ec32 orthologEc-15_000490.1
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00194
Exons3
Model size716
Cds size705
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig107.620.1prot_P-lacustris_contig107.620.1Pleurocladia lacustris SAG_25_93polypeptideP-lacustris_contig107 151432..156568 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815343.8872068-UTR-P-lacustris_contig107:151420..1514311622815343.8872068-UTR-P-lacustris_contig107:151420..151431Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig107 151421..151431 +
1693493489.1277266-UTR-P-lacustris_contig107:151420..1514311693493489.1277266-UTR-P-lacustris_contig107:151420..151431Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig107 151421..151431 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815343.9010987-CDS-P-lacustris_contig107:151431..1515351622815343.9010987-CDS-P-lacustris_contig107:151431..151535Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig107 151432..151535 +
1693493489.1427567-CDS-P-lacustris_contig107:151431..1515351693493489.1427567-CDS-P-lacustris_contig107:151431..151535Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig107 151432..151535 +
1622815343.9134598-CDS-P-lacustris_contig107:152992..1533081622815343.9134598-CDS-P-lacustris_contig107:152992..153308Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig107 152993..153308 +
1693493489.1525743-CDS-P-lacustris_contig107:152992..1533081693493489.1525743-CDS-P-lacustris_contig107:152992..153308Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig107 152993..153308 +
1622815343.9316745-CDS-P-lacustris_contig107:156283..1565681622815343.9316745-CDS-P-lacustris_contig107:156283..156568Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig107 156284..156568 +
1693493489.1628606-CDS-P-lacustris_contig107:156283..1565681693493489.1628606-CDS-P-lacustris_contig107:156283..156568Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig107 156284..156568 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-lacustris_contig107.620.1

>prot_P-lacustris_contig107.620.1 ID=prot_P-lacustris_contig107.620.1|Name=mRNA_P-lacustris_contig107.620.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=235bp
MKCATAFALMMASANAFVPSAPLAKLTTSRTSSSSLEMIFSMGKKSKAPV
KSKAKARAVSTNAVEGLVGADIETGGPFDPLGFGKNCPPEQMQWYRAAEL
KHGRICMLAALGQITQHFTHWNDPSGIFDKSGSAWGAMQQVYEQRPFAFL
QIMLAIFAVEVYGNRKQQESPSGGDLGFDPLGLRPSGAEAWERVQLRELK
NGRLAMFAILGMIVQEHITGVGVLEKVDALAGLA*
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mRNA from alignment at P-lacustris_contig107:151421..156568+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-lacustris_contig107.620.1 ID=mRNA_P-lacustris_contig107.620.1|Name=mRNA_P-lacustris_contig107.620.1|organism=Pleurocladia lacustris SAG_25_93|type=mRNA|length=5148bp|location=Sequence derived from alignment at P-lacustris_contig107:151421..156568+ (Pleurocladia lacustris SAG_25_93)
ACACCAACATCATGAAGTGCGCCACCGCTTTTGCCCTCATGATGGCTTCG
GCCAACGCATTCGTTCCGAGCGCACCACTGGCCAAGCTCACCACGTCTCG
CACCTCGTCATCGAGGTGAGCACACACGCGGGACAGGGATCGATTTTGCA
TGTTGCGTCTCTCGACCATGGCAGAAGCCAAGTGCGCGGCGACTTGTCCA
CTAGACGGCAGTAGGACAGGATGTGTGAGCTGGGGAGAGTTATGGATCAC
TAGCCTTGCCTCGCTGTGAATGCATCCGGCCTTTCGCGTGTCGGCCCTTG
AGTGTGTGATCGTGGCAAACATGCGCCCCCAGGACGGCCCTTATGTGTGG
GCTGCGGCAGACGTAGGGCGTGAGAAAGGTGTGCATGTTTATGATGGAGC
GGCTGGCTGGATGCGAGATCGGAGGCGTCCGTGTTGAAGGAATGGGAACT
TGCATACGGTCAAAAGCACACAACCGAGTCAGTTCGTTTTCTGCTGATCT
TTTGTCTTTTGTTTGGCTGCATGCAACGGGAGAGCGCCGATTGACTCATG
TACACCACACCCGTTGTCTGTCGCACCGTCGGGAATGGCCGTCTTGGGTG
GGGATGGTTGTGTTCCTCTCGCCATACACGTTCTGTGCTCTCTCAACCCC
CTCCTCTCTCCCTTTCAATCCAGTCCTCACACTGAACAACCCTTGTCGTG
GAAGGAGGTCATGGGCTCTTTTTCTAGATGTGTCCACCCTCCTCTTGATT
ACGTGGCCTTGTGTTGTTGAGGTGAATCAGCCGACCTTGCTGGCCGCACT
GAACAACCTGTGACGCTACTGACAGCTGTGTTAGGAATTCACGCATTTGG
CACGCTGGATGCCTGGATGGGATACCGAACCGATGGGTGGTGGCTTCCCC
TCCCCTCTCTGTCTGTGTTGCTCTCTTCATGTGTCGCTGTGTGCTAAATT
ATACTTCCAAACTGCTGTGCATAGCATTAGAGCATTAGTACATCCAGCAA
CTATTAGTACAGCAACTGGCCCCGGCCTGTACACTACCCACACACACACA
CGAGCCTAATATACGTGCTCTGAGTAGTACACACATGATTGCGTTCGTCC
AGTCCATACGGTGCGATGACTTTCTGCCGACCTTCACTTCACTTCTGGAT
CTCCAACGATCTATTCTAGGCATACATTCGAGGTGAAAGGCGACTGAGTA
CTTTCGACACTCTGGGGTAGTGGTAGACACCTTACAGCGGGCACACGGGG
GAATCGTTTGAAATATTCGACAACGTCCTTGACGACTGCCGCTTGAGCGT
GTCATGTGTCCATCCCATGTCCGGCGTACGCTGCATCATCCGAACCACGC
ATACCGTCAACCCTTCGACTGCACATCAACTACATGTGAACAACTATTTC
GCGGTCCCACGACTCGCTACACTACAGCAGTGATATTCCATCATGTCGAT
GGGCTGAAAGCCCACCTGCTCTGTTGTGCCGACCCATGAGCCCAGCCCAT
ATTAACAGCGAATGTGCCCACTTCGGACCCCTCCCTCTCCGCTTCCCCGC
ACTTCTTGACCGAAAATGGCAGCCTCGAAATGATTTTCAGCATGGGCAAG
AAGAGCAAGGCCCCGGTCAAGAGCAAGGCGAAGGCACGGGCCGTCTCCAC
CAACGCCGTCGAGGGCCTTGTAGGCGCCGACATCGAGACCGGCGGCCCGT
TCGACCCGCTGGGCTTCGGCAAGAACTGCCCGCCCGAGCAGATGCAGTGG
TACCGCGCCGCTGAGCTGAAGCACGGACGCATTTGCATGCTCGCCGCGTT
GGGGCAGATCACCCAGCACTTCACTCACTGGAACGACCCCTCGGGCATCT
TTGACAAGAGCGGATCCGCATGGGGAGCGATGCAGCAGGTGCGTCTGCGT
CCTTGTGGAGCTTTCGGTTTGGCTTCGTTGTCAGTTGTGTGGTTCGCTTT
GGTAACTTTGGTGGTTGCGCCATCACAGGTACGACTTTTTCTGATAACAT
GGGAACTTCACCGGCCACGACTCTTTCTGAGTAGATGGGCACTTTACGAG
CCATGGCGAAAAAGCGTGTCGGACTATGCCGCACAGCAAGACGGTGCCCT
CCAGTTGGCAGTCTAGGCCAGTCTCTGCGATTACTACAGTCTTTTGTCAG
CCGACGAGAAATTTCTGCCAAAACGAACAACACATGTGACGGTGATGCCA
AACCCAACACCCTTCCTAGCGAGACGTCACCAACTAGTCGAATTCTCCTG
GCCCTTTGATGCCCTGGTCCAATTGGGCCCGGGTTTGGGTGAAGGCGGCC
GAGATCTTGCCTCTAAGTGCGAAGGCCTGTGGTTGGGCAATTTGGATTAC
CCCTCTTCATCAAGCATGGTGTGAATGCATGCAAGACGTGCACCCCGTGA
AATGCGGGCACCCGCTCCTTTGCATATAGGCTTCAGCTTCATGGACAAGT
GTCTCGCAAAGATTTATGTGTTGTTTGGACGGTACAAAGCGAGACATTTG
CATACCCTTACCCTACCCCTGAATAAGCGACAATACGTGTTGACGCCCGC
CTCCGTTGCTGAAAAAAAAACGATCTAAGCTGCAGGAATAAGAGTAAAAT
CCTTAGACGACAGGGCTTCTCAACCGCCATTCCCAGTTTTTGCTGTTTGC
CCTTTCACAAGGGCTCTATCGTCTCGATTCATGCAAGTGGAATGCTGGTC
TAATGCTTGTGATTGTTGCGCTATCGGAGGCAGTTCGAGGAAACCACCTG
AACTTTCCAATCATTTCGTGTCACCCAAACAATAGACAGGGCATGTTCTC
CTGCCTAGCCTGTTTATAGTGTGACCTTTCCACGACTAAACCATGGTTGG
CGAGAATCTCCTCTGCTCTCGCCCTCGCTACAAGATGTTTGCCGAGATGC
AATACGATATCCCATGTTCCGCGTGCAGACTCATCCTGTCACCGTGCTTG
GTGTTTTGTTATCGTACACGAGTCAATGACGTCATGACATAGATCTGTGG
CATTCTCCCAGGCAAGGGATCGAATTTTTGTGGTACTGTAGCATATAGGC
TAGGCACACAAGTGGCATGTACCTTACTGCATGATGGTTGATATGCATCT
CACTCGTCAAAGGTAGGGCGTAGCTGCCCCAATTCGCTGTTGTTGTGTAC
TCCTACTTCTTTCTCTTTGTTTACACATGACAACCACTTCTTTCATGACA
TGCCCAATTCGAGGTATTGCCCGCTTTCTTTACAAACGTAAGTCAGTTCA
ACCTCGGACATGGGAAAGTCCCAACCTCGGAACTGGAACGTCCAACTTCG
GAAATGGAAGTGGCAAAAAAAAGAAGCCTAACTACATGAATTTAGGAAAC
TTTTCCGCCGCCTCGATTTTTTTTAGCGCCAACCCTCTCCTCGTTTCTAC
CTCTCGTTCCCTCATCCGTGACCGTAAAAGCCAGTTAGTCCTTCAGCGCC
TTGTATAGTACGCGGCAGCGCCGGTGGGTTGATGTGTGTGAGTGCGCATA
CATGGCTCCCAAAATCGCGTCTATCCCGAGGGTGTTGTCGCGGTTGGTTT
CCTCTCTGCATTTGAGATCGAGACGAGCGTGCTCGTTCGGATGTAGATAG
AGAAAGGACATCAACCCATCAACCCCAACGCATCCTGAGACAGACGTGTC
GTTGGAGACTGCGCACGCACACACCATCCACACATCGTGATGAACGGCAG
CGCCGGAACGCAACGCAGAGGCAGGCGTGAGGTGGAATTGTTGTTGAATT
GTTCGGCGGCTCGCCTCTGTAGTGGCAAGCGGCCACACCCGGGGTGTATT
TTAGTTGGCCGCTGACTTCTAGTTTTCCCCAATTCCTCTCAAGAATATAT
ACCGAACGCAAATTGTTCGAAGGTGTTCGAAGGCGACCCCTTCAAACAAT
GGCCTCTCTCCAAGGCAAAAAGACAGGATGAGCTCACCTTCCGAATGAGG
AGCCCTACGGTCTCTCTCTCTCTCTCTCTCTCGTCCTCCTGTCTCTCTCA
CTCACCCCTCTGTTTGGTCTTCGACCCCAAGAATACTATAAAATGCCTGT
CCATCGCCTAACCTAGGACAGTCATCCCCTTAGACGGCAGGCTTTCTCAT
CCGGCGGAGCATCTCGTCTCACCGCTGCGGCACATCATTATTCGTATCGA
GCCCTCTGGATGTGTCCCTTACCCTACCCTACCAAACTATCGTTGCCCCC
AGTGTATCGACCGACATGTTTGATTACCGGACTACATGTTCCGGCGAAGT
ACCTAGTGGCCAGAAGTGAGAGTACTCGAGCAGCGAGACTATGCATGCCG
TGATATGTTTTTTGAAGGATTTTGGTGCATCCAAACGTCGTTAACTCGTG
GAATCACGTGCGGAGTCGCCAATAAAAAATACAACCAATGGTTCCCAGTC
TTGAACCGTTCTTTGGGTTCGTTTTCGAGTGGCGGAAGAAAAACAAGGCC
GGTCTGTACCAGCGGTAAGGGATGTTTTCGGCCTCACATAAAGCTGGACT
TGATTAAACCCACCGACCCTCCTGAACTTACCGGCAGGCTTGATCGATCT
CGGGGTGTTTTCTAACCTCCCCCCGGCCAACTCCGAGCGAGCTTTTGATG
AATCGAATCTTGGACTGAACTTTGACCTCACCAAATTTGTTCAGTTTGCT
ATGCTGAACTGTAGTTTTGCCGCATATTTTTCACCGTGGCCATCTTCCTC
GTCCCCCCACCCCTCTGTGTCGCCACCGCCTTTGCCGTAAGTATTTAAGC
TAGCCTTCATGACGGTCCCCGTGCAGGTAACATCCTGAATGTGTACGGCA
GCGTTCCCTGCATACATCCCGTCTGACGAGCCCCCGCTCCCCCATCCCGC
ATTTTTGCCTCAGGTGTACGAGCAGCGTCCGTTCGCTTTCCTCCAGATCA
TGCTGGCCATCTTCGCCGTCGAGGTGTACGGCAACCGGAAGCAGCAGGAG
AGCCCCAGCGGCGGGGACCTCGGCTTCGACCCCCTCGGGCTCAGGCCCTC
TGGCGCGGAAGCGTGGGAGAGGGTCCAGCTGAGGGAGCTCAAGAACGGCC
GCCTGGCCATGTTCGCCATCCTCGGAATGATCGTGCAGGAGCACATCACG
GGGGTGGGTGTGTTGGAGAAGGTGGACGCCCTCGCCGGATTGGCCTAA
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Coding sequence (CDS) from alignment at P-lacustris_contig107:151421..156568+

>mRNA_P-lacustris_contig107.620.1 ID=mRNA_P-lacustris_contig107.620.1|Name=mRNA_P-lacustris_contig107.620.1|organism=Pleurocladia lacustris SAG_25_93|type=CDS|length=1410bp|location=Sequence derived from alignment at P-lacustris_contig107:151421..156568+ (Pleurocladia lacustris SAG_25_93)
ATGAAGTGCGCCACCGCTTTTGCCCTCATGATGGCTTCGGCCAACGCATT
CGTTCCGAGCGCACCACTGGCCAAGCTCACCACGTCTCGCACCTCGTCAT
CGAGATGAAGTGCGCCACCGCTTTTGCCCTCATGATGGCTTCGGCCAACG
CATTCGTTCCGAGCGCACCACTGGCCAAGCTCACCACGTCTCGCACCTCG
TCATCGAGCCTCGAAATGATTTTCAGCATGGGCAAGAAGAGCAAGGCCCC
GGTCAAGAGCAAGGCGAAGGCACGGGCCGTCTCCACCAACGCCGTCGAGG
GCCTTGTAGGCGCCGACATCGAGACCGGCGGCCCGTTCGACCCGCTGGGC
TTCGGCAAGAACTGCCCGCCCGAGCAGATGCAGTGGTACCGCGCCGCTGA
GCTGAAGCACGGACGCATTTGCATGCTCGCCGCGTTGGGGCAGATCACCC
AGCACTTCACTCACTGGAACGACCCCTCGGGCATCTTTGACAAGAGCGGA
TCCGCATGGGGAGCGATGCAGCAGCCTCGAAATGATTTTCAGCATGGGCA
AGAAGAGCAAGGCCCCGGTCAAGAGCAAGGCGAAGGCACGGGCCGTCTCC
ACCAACGCCGTCGAGGGCCTTGTAGGCGCCGACATCGAGACCGGCGGCCC
GTTCGACCCGCTGGGCTTCGGCAAGAACTGCCCGCCCGAGCAGATGCAGT
GGTACCGCGCCGCTGAGCTGAAGCACGGACGCATTTGCATGCTCGCCGCG
TTGGGGCAGATCACCCAGCACTTCACTCACTGGAACGACCCCTCGGGCAT
CTTTGACAAGAGCGGATCCGCATGGGGAGCGATGCAGCAGGTGTACGAGC
AGCGTCCGTTCGCTTTCCTCCAGATCATGCTGGCCATCTTCGCCGTCGAG
GTGTACGGCAACCGGAAGCAGCAGGAGAGCCCCAGCGGCGGGGACCTCGG
CTTCGACCCCCTCGGGCTCAGGCCCTCTGGCGCGGAAGCGTGGGAGAGGG
TCCAGCTGAGGGAGCTCAAGAACGGCCGCCTGGCCATGTTCGCCATCCTC
GGAATGATCGTGCAGGAGCACATCACGGGGGTGGGTGTGTTGGAGAAGGT
GGACGCCCTCGCCGGATTGGCCTAAGTGTACGAGCAGCGTCCGTTCGCTT
TCCTCCAGATCATGCTGGCCATCTTCGCCGTCGAGGTGTACGGCAACCGG
AAGCAGCAGGAGAGCCCCAGCGGCGGGGACCTCGGCTTCGACCCCCTCGG
GCTCAGGCCCTCTGGCGCGGAAGCGTGGGAGAGGGTCCAGCTGAGGGAGC
TCAAGAACGGCCGCCTGGCCATGTTCGCCATCCTCGGAATGATCGTGCAG
GAGCACATCACGGGGGTGGGTGTGTTGGAGAAGGTGGACGCCCTCGCCGG
ATTGGCCTAA
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