mRNA_P-lacustris_contig1065.594.1 (mRNA) Pleurocladia lacustris SAG_25_93
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Overview
Homology
BLAST of mRNA_P-lacustris_contig1065.594.1 vs. uniprot
Match: D8LL49_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL49_ECTSI) HSP 1 Score: 311 bits (796), Expect = 3.610e-103 Identity = 174/229 (75.98%), Postives = 193/229 (84.28%), Query Frame = 1
Query: 1 VAALCVADAFVPPAVGLRNARNSAV----SACRRGTSGARADRTGRSPLARREGRQQQHQ-DALKAQMTDEEMALDQALIRRVAQEVEAESGVDLDQLINPAKVVNLERDLVKLRAALENGPGSERSTIEQEIEKKEATLAKEKRMVMQGWLKNIFVGQAVVTTVLGGMMAYDQVPFFPHVDLAIQVLGFWFVWLFTVPSLRARKPGASEKVALDIAFLATPVVSFAMP 672
+AAL ADAFVPP G AR+SAV ++ RRG SG RS RR GRQQ+ Q DAL AQMTDEEMALDQALI+RV QEVEAESGV+LDQLINPAKV+NLERDLVKLRAALE+ PG++R IE+EI KKE+TL KEKRM MQGWLK +FVGQAV+TT+LGG+MA DQVPFFPHVD++IQVLGFWFVWLFTVPSLRARKPGASEKVALDIAFLATPVVSFAMP
Sbjct: 36 IAALRGADAFVPPTGGFATARSSAVHVSSTSSRRGCSGVE-----RSARPRRTGRQQEGQGDALMAQMTDEEMALDQALIQRVTQEVEAESGVELDQLINPAKVINLERDLVKLRAALEDEPGTDREAIEEEIAKKESTLVKEKRMYMQGWLKKVFVGQAVITTILGGLMASDQVPFFPHVDISIQVLGFWFVWLFTVPSLRARKPGASEKVALDIAFLATPVVSFAMP 259
BLAST of mRNA_P-lacustris_contig1065.594.1 vs. uniprot
Match: A0A6H5JI21_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI21_9PHAE) HSP 1 Score: 306 bits (784), Expect = 1.840e-101 Identity = 173/229 (75.55%), Postives = 191/229 (83.41%), Query Frame = 1
Query: 7 ALCVADAFVPPAVGLRNARNSAV----SACRRGTSGARADRTG--RSPLARREGRQQQHQ-DALKAQMTDEEMALDQALIRRVAQEVEAESGVDLDQLINPAKVVNLERDLVKLRAALENGPGSERSTIEQEIEKKEATLAKEKRMVMQGWLKNIFVGQAVVTTVLGGMMAYDQVPFFPHVDLAIQVLGFWFVWLFTVPSLRARKPGASEKVALDIAFLATPVVSFAMP 672
AL ADAFVPP GL A +SAV ++ RRG SG G RS R GRQQQ Q D L AQMTDEEMALDQALI+RV +EVEAESGV+LDQLINPAKV+NLERDLVKLRAALE+GPG++R IE+EI KKE+TL KEKRM MQGWLK +FVGQAV+TT+LGG+MA DQVPFFPHVD++IQVLGFWFVWLFTVPSLRARKPGASEKVALDIAFLATPVVSFAMP
Sbjct: 35 ALRGADAFVPPTGGLAKAPSSAVHVSSTSSRRGCSGVDVRVRGIERSARPRSTGRQQQGQGDVLMAQMTDEEMALDQALIQRVTEEVEAESGVELDQLINPAKVINLERDLVKLRAALEDGPGNDRKAIEEEIAKKESTLVKEKRMYMQGWLKKVFVGQAVITTILGGLMASDQVPFFPHVDISIQVLGFWFVWLFTVPSLRARKPGASEKVALDIAFLATPVVSFAMP 263
BLAST of mRNA_P-lacustris_contig1065.594.1 vs. uniprot
Match: A0A835YV04_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YV04_9STRA) HSP 1 Score: 195 bits (496), Expect = 1.140e-58 Identity = 103/159 (64.78%), Postives = 123/159 (77.36%), Query Frame = 1
Query: 199 EMALDQALIRRVAQEVEAESGVDLDQLINPAKVVNLERDLVKLRAALENGPGSERSTIEQEIEKKEATLAKEKRMVMQGWLKNIFVGQAVVTTVLGGMMAYDQVPFFPHVDLAIQVLGFWFVWLFTVPSLRARKP-GASEKVALDIAFLATPVVSFAMP 672
E A DQALI RVA EVE ESGV LDQLINP+KV+NLERDLVKLRA LE G S + + I+ KEA LA EKR VMQ WLK IFVGQA ++ ++ G M YD+VP F HVDL+I+VLGFW +WLF +PSLRARKP +EK AL+IAF+A+P+VS A+P
Sbjct: 62 EAAADQALIARVAAEVERESGVALDQLINPSKVINLERDLVKLRATLETATGDSASELRKTIDGKEAKLATEKRAVMQDWLKQIFVGQAALSVIIAGAMVYDRVPGFEHVDLSIRVLGFWVIWLFAIPSLRARKPTNPAEKTALNIAFVASPLVSLALP 220
BLAST of mRNA_P-lacustris_contig1065.594.1 vs. uniprot
Match: A0A7S2UZ01_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UZ01_9STRA) HSP 1 Score: 182 bits (463), Expect = 1.670e-53 Identity = 95/155 (61.29%), Postives = 119/155 (76.77%), Query Frame = 1
Query: 211 DQALIRRVAQEVEAESGVDLDQLINPAKVVNLERDLVKLRAALENGPGSER-STIEQEIEKKEATLAKEKRMVMQGWLKNIFVGQAVVTTVLGGMMAYDQVPFFPHVDLAIQVLGFWFVWLFTVPSLRARKPGASEKVALDIAFLATPVVSFAMP 672
D AL+ R+A+EVE +GV+LDQL+NP KVVNLERDL+KL LE S R I +E+E+K L EKRMV+QGWLKN+FVGQAV++T G+M YD VPF H+DL+++VLGFW +WLFTVPSLRARKP A EK AL+IAF ATP+ + A+P
Sbjct: 75 DAALVARLAKEVEEANGVELDQLLNPGKVVNLERDLLKLSKELEICQDSTRIEEINKEMEQKTKKLNVEKRMVVQGWLKNLFVGQAVISTFAAGLMVYDAVPFVDHLDLSVRVLGFWVIWLFTVPSLRARKPAADEKTALNIAFGATPLTNLALP 229
BLAST of mRNA_P-lacustris_contig1065.594.1 vs. uniprot
Match: W7TZ94_9STRA (Resistance to phytophthora 1 protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TZ94_9STRA) HSP 1 Score: 175 bits (444), Expect = 1.160e-50 Identity = 87/157 (55.41%), Postives = 117/157 (74.52%), Query Frame = 1
Query: 211 DQALIRRVAQEVEAESGVDLDQLINPAKVVNLERDLVKLR---AALENGPGSERSTIEQEIEKKEATLAKEKRMVMQGWLKNIFVGQAVVTTVLGGMMAYDQVPFFPHVDLAIQVLGFWFVWLFTVPSLRARKPGASEKVALDIAFLATPVVSFAMP 672
D +++R+ ++V E+GVDLDQL+NP+KVVNLE +L+ LR AA G G + +E +IEKKE LA EKR+VM+GWLKN+F+GQ+++ VL G++AYD +P F H+ L I+ FW W+FT+PSLRAR+PGA EK ALD+AFL TPVVS MP
Sbjct: 70 DDPMVQRIREDVRRETGVDLDQLLNPSKVVNLEFELINLRNERAAATQGGGKALAKLEAQIEKKETQLATEKRLVMRGWLKNLFLGQSLLAVVLSGVVAYDALPGFEHLPLPIRAFAFWSFWMFTIPSLRARRPGAVEKKALDVAFLLTPVVSLGMP 226
BLAST of mRNA_P-lacustris_contig1065.594.1 vs. uniprot
Match: A0A6S9FX91_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9FX91_HETAK) HSP 1 Score: 154 bits (390), Expect = 1.030e-42 Identity = 85/169 (50.30%), Postives = 118/169 (69.82%), Query Frame = 1
Query: 172 ALKAQMTDEEMALDQALI-RRVAQEVEAESGVDLDQLINPAKVVNLERDLVKLRAALENGPGSERST-IEQEIEKKEATLAKEKRMVMQGWLKNIFVGQAVVTTVLGGMMAYDQVPFFPHVDLAIQVLGFWFVWLFTVPSLRARKPGASEKVALDIAFLATPVVSFAMP 672
AL+A T+E + ALI +R+ EV SGV+L+QL++PAKVVNLER++ +L+ LE R+ IE+EI K+ EKRM +QGWLK +FVGQ+V++ V+ G ++Y VPF VD++++VLGFWF+WLFT+PSLRARKP A EK AL+ AF TP+ + P
Sbjct: 53 ALRAASTEELTPEEDALIIKRLEDEVMEISGVELEQLLSPAKVVNLEREIFQLKKELETTSNQARAAEIEEEIATKQTKANGEKRMYVQGWLKTLFVGQSVLSVVVAGFLSYGIVPFVEDVDISVRVLGFWFIWLFTIPSLRARKPAAGEKEALNWAFGLTPLTNLLAP 221
BLAST of mRNA_P-lacustris_contig1065.594.1 vs. uniprot
Match: A0A6S8YSX9_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A6S8YSX9_9STRA) HSP 1 Score: 146 bits (368), Expect = 5.660e-39 Identity = 93/204 (45.59%), Postives = 121/204 (59.31%), Query Frame = 1
Query: 166 QDAL-----KAQMTDEEMALDQALIRRVAQEVEAESGVDLDQLINPAKVVNLERDLVKLRAAL--------------------ENGPGSERST-IEQEIEKKEATLAKEKRMVMQGWLKNIFVGQAVVTTVLGGMMAYDQVPFFP---------HVDLAIQVLGFWFVWLFTVPSLRARKPGASEKVALDIAFLATPVVSFAMP 672
QDAL A M +E+ D +RR+ ++++ ESGVDLDQL+NPAKVVNLERDLV LR+ L +NG G E + + ++I KKE L E+R V +GWLKNIF+GQA+++ L +M D F +D++IQVLGFW LF VPSLR+R+P EK ALDIAFLATP+VS P
Sbjct: 62 QDALVSVGWSAPMMADELTADDPFVRRINEQIQEESGVDLDQLLNPAKVVNLERDLVNLRSQLADLTGITGIDNFIGITTEEIDNGGGGEDADKLRKKISKKEKDLLIERRSVFRGWLKNIFLGQAILSLGLSWIMVTDPSILFGGFDWFNNTNSIDISIQVLGFWXXXLFIVPSLRSRRPKGFEKKALDIAFLATPLVSLLAP 265
BLAST of mRNA_P-lacustris_contig1065.594.1 vs. uniprot
Match: A0A7S2RBE4_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RBE4_9STRA) HSP 1 Score: 139 bits (350), Expect = 4.210e-37 Identity = 83/189 (43.92%), Postives = 115/189 (60.85%), Query Frame = 1
Query: 196 EEMALDQALIRRVAQEVEAESGVDLDQLINPAKVVNLERDLVKLRAAL--------------------ENGPGSERST-IEQEIEKKEATLAKEKRMVMQGWLKNIFVGQAVVTTVLGGMMAYDQVPFF---------PHVDLAIQVLGFWFVWLFTVPSLRARKPGASEKVALDIAFLATPVVSFAMP 672
EEM ++R+ +++ ESGVDLD+L+NPAKVVNLERDL LR+ L + G G ER+ + ++I+KKE L+ E+R V +GWLKNIF+GQA+++ L +MA + F +D++IQVLGFW LF VPSLR+R+P +EK ALDIAFL TP++S P
Sbjct: 2 EEMTSADPFVQRINAQIQKESGVDLDELLNPAKVVNLERDLYNLRSELASLTGKEDEIDVLDLSTSDCDGGGGGERADEVRKKIDKKEKDLSIERRAVFRGWLKNIFLGQAILSLGLSWVMATNPEALFGSFDWFHRISSIDVSIQVLGFWXXXLFIVPSLRSRRPTGAEKKALDIAFLGTPLISILAP 190
BLAST of mRNA_P-lacustris_contig1065.594.1 vs. uniprot
Match: A0A448Z3P0_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z3P0_9STRA) HSP 1 Score: 140 bits (353), Expect = 1.240e-36 Identity = 86/175 (49.14%), Postives = 113/175 (64.57%), Query Frame = 1
Query: 187 MTDEE--MALDQALIRRVAQEVEAESGVDLDQLINPAKVVNLERDLVKLRAALENGPGSERSTIE---QEIEKKEATLAKEKRMVMQGWLKNIFVGQAVVTTVLGGMMAYDQVPFFP--------HVDLAIQVLGFWFVWLFTVPSLRARKPGASEKVALDIAFLATPVVSFAMP 672
M+D E M D ++ + + + GV LD L+NPAKVVNLER+L +LR LE ++ STI+ + IEKKE LA E+R V +GWLKNIFVGQAV++ + +MA + F +D++IQVLG+WF WLF VPSLR+R+P EK ALDIAFL TP+VS A P
Sbjct: 106 MSDPEQPMTSDDPFVQNIDAGIREDFGVGLDDLLNPAKVVNLERELYQLREELEGT--TDESTIQSITKSIEKKEGKLAIERRSVFRGWLKNIFVGQAVISFGISYVMATNPSSLFGGFDWYYYNSMDISIQVLGYWFWWLFIVPSLRSRRPRGFEKEALDIAFLGTPLVSLAAP 278
BLAST of mRNA_P-lacustris_contig1065.594.1 vs. uniprot
Match: A0A7S4A0H7_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A0H7_9STRA) HSP 1 Score: 138 bits (347), Expect = 5.920e-36 Identity = 82/161 (50.93%), Postives = 111/161 (68.94%), Query Frame = 1
Query: 196 EEMALDQALIRRVAQEV-EAESGVDLDQLINPAKVVNLERDLVKLRAALENGPGSERSTIEQEIEKKEATLAKEKRMVMQGWLKNIFVGQAVVTTVLGGMMAYDQVPFFPHVDLAIQVLGFWFVWLFTVPSLRARKP-GASEKVALDIAFLATPVVSFAMP 672
+E+ D L++R+A EV E +G +D L+NPAK++N+ER+L++LRA + G S S + ++IEKKE+ EKR VM+ WLK +F GQA T L +++YD +PF +DL+I+VLGFW WLFTVPSLR+ KP A EK ALD AFLAT V S A P
Sbjct: 40 QEVTSDDPLVQRIAAEVAEINNGASMDALLNPAKLINVERELIELRARRDAGDSS--SDLLKQIEKKESVAYVEKRAVMRDWLKALFRGQAYATIGLSFLLSYDLIPFV-DLDLSIRVLGFWSWWLFTVPSLRSIKPLPAPEKKALDAAFLATLVASLAAP 197 The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig1065.594.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-lacustris_contig1065.594.1 >prot_P-lacustris_contig1065.594.1 ID=prot_P-lacustris_contig1065.594.1|Name=mRNA_P-lacustris_contig1065.594.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=224bp VAALCVADAFVPPAVGLRNARNSAVSACRRGTSGARADRTGRSPLARREGback to top mRNA from alignment at P-lacustris_contig1065:69407..72339+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-lacustris_contig1065.594.1 ID=mRNA_P-lacustris_contig1065.594.1|Name=mRNA_P-lacustris_contig1065.594.1|organism=Pleurocladia lacustris SAG_25_93|type=mRNA|length=2933bp|location=Sequence derived from alignment at P-lacustris_contig1065:69407..72339+ (Pleurocladia lacustris SAG_25_93)back to top Coding sequence (CDS) from alignment at P-lacustris_contig1065:69407..72339+ >mRNA_P-lacustris_contig1065.594.1 ID=mRNA_P-lacustris_contig1065.594.1|Name=mRNA_P-lacustris_contig1065.594.1|organism=Pleurocladia lacustris SAG_25_93|type=CDS|length=1344bp|location=Sequence derived from alignment at P-lacustris_contig1065:69407..72339+ (Pleurocladia lacustris SAG_25_93)back to top |