mRNA_P-lacustris_contig1065.593.1 (mRNA) Pleurocladia lacustris SAG_25_93

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-lacustris_contig1065.593.1
Unique NamemRNA_P-lacustris_contig1065.593.1
TypemRNA
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Homology
BLAST of mRNA_P-lacustris_contig1065.593.1 vs. uniprot
Match: D8LL50_ECTSI (zf-NOSIP domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LL50_ECTSI)

HSP 1 Score: 425 bits (1092), Expect = 6.030e-146
Identity = 216/264 (81.82%), Postives = 242/264 (91.67%), Query Frame = 2
Query:    2 DSQQIFGHCALCIHPAVEPMATPSGHLYCKECIVEFLLAKTQELRRQREAFEAQEKSKAMDEVTADASSRVKATREFVSTQQQLVLSKPQASESTGSDKHEGKGKKRAREEQAGFGADAATSAGKAGKEDEVVQKELTQIAVLKTKKERQEQLRTTSWWLPQFQPEGVKEVIVEPPKRPASPMSGEPLRPKDLIPVIFTIDSEKEKTAHLSGGEGNRGSIICPITRKGIISQKAVLIKRTGHVMLEDAAKRFALPTMTCPVTGE 793
            DSQQ FGHC+LCIHPAVEPMATPSGH+YCKECIVEFLL KTQEL+RQREAFEAQ+K +A DEV+ADAS RV+AT +FVS QQQLV++KPQA++ + S K EGKGKKR REEQ G GADA+  +GK GK D VV+KEL+QIAVLK+KKERQ+QLR TSWWLPQFQPEGVKE IV+PPKRP SPMSGEPLRPKDLIPVIFT+DSEK+KTAH+SGG+GNRGSIICP+TRKGIISQKAVLIKRTGHVMLEDAAK+FALPTMTCPVTGE
Sbjct:   39 DSQQTFGHCSLCIHPAVEPMATPSGHVYCKECIVEFLLTKTQELKRQREAFEAQQKDQATDEVSADASRRVEATNDFVSNQQQLVVTKPQATKPSDSGKSEGKGKKRGREEQTGVGADASAPSGKEGKRDHVVEKELSQIAVLKSKKERQDQLRMTSWWLPQFQPEGVKEAIVQPPKRPGSPMSGEPLRPKDLIPVIFTLDSEKKKTAHISGGDGNRGSIICPVTRKGIISQKAVLIKRTGHVMLEDAAKQFALPTMTCPVTGE 302          
BLAST of mRNA_P-lacustris_contig1065.593.1 vs. uniprot
Match: A0A836CI14_9STRA (zf-NOSIP domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CI14_9STRA)

HSP 1 Score: 181 bits (458), Expect = 2.510e-50
Identity = 119/298 (39.93%), Postives = 165/298 (55.37%), Query Frame = 2
Query:    2 DSQQIFGHCALCIHPAVEPMATPSGHLYCKECIVEFLLAKTQELRRQREAFEAQEKSKAMDEVTADASSRVKATREFVSTQQQL-----------------------------------VLSKPQASESTGSDKHEGKGKKRAREEQAGFGADAATSAGKAGKEDEVVQKELTQIAVLKTKKERQEQLRTTSWWLPQFQPEGVKEVIVEPPKRPASPMSGEPLRPKDLIPVIFTIDSEKEKTAHLSGGEGNRGSIICPITRKGIISQKAVLIKRTGHVMLEDAAKRFALPTMTCPVTG 790
            DSQ  FG+CA+C+  A EPMATPSGH+YC+ECI+E+LL KT++L+RQR A+EAQ++++A   V ADA  + ++  +FV TQ  +                                       P A+             KRA  E A    ++         E + V  ++     + T+++ +E L+ TS+WLP   PE V+E +  P  RP SPMSG+PLR K+LIPV FT+D  KE+    SGG G +G IIC +TR+ I  Q  VL+ R+G VML+ AA+ FALPTM CPVTG
Sbjct:   32 DSQLPFGNCAMCLRLAKEPMATPSGHIYCRECILEYLLVKTKDLKRQRAAYEAQQQAQAERAVAADAEKQQRSVDKFVKTQGAVGPLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAAALG-----------KRAHPEDAERRLES---------EKKRVMAKMALPVDMTTREQHKEILKRTSFWLPTHAPEHVEERVAPPEARPRSPMSGDPLRAKNLIPVRFTVDGGKEEAGADSGGAG-KGRIICAVTRREIHHQPTVLLARSGQVMLKSAAEEFALPTMMCPVTG 308          
BLAST of mRNA_P-lacustris_contig1065.593.1 vs. uniprot
Match: A0A7S3Y8P7_9EUKA (Hypothetical protein n=2 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3Y8P7_9EUKA)

HSP 1 Score: 139 bits (350), Expect = 8.030e-35
Identity = 91/264 (34.47%), Postives = 136/264 (51.52%), Query Frame = 2
Query:    2 DSQQIFGHCALCIHPAVEPMATPSGHLYCKECIVEFLLAKTQELRRQREAFEAQEKSKAMDEVTADASSRVKATREFVSTQQQLVLSKPQASESTGSDKHEGKGKKRAREEQAGFGADAATSAGKAGKEDEVVQKELTQIAVLKTKKERQEQLRTTSWWLPQFQPEGVKEVIVEPPKRPASPMSGEPLRPKDLIPVIFTIDSEKEKTAHLSGGEGNRGSIICPITRKGIISQKAVLIKRTGHVMLEDAAKRFALPTMTCPVTGE 793
            DS+  FGHC L +  AV+P+ +PSGH+Y KE I E+LLAK +EL + R A+E +++ KA +E    +       ++F+  Q+ +   +   S+                 E+         +  KAG   E++Q         K+K+E+Q+ L+ TS+WLP+F P   K+ +  PPKRP SP S  PLR KDL+P+   +         L G  G     +C ++ K I  Q  V ++ TG VML+      A PTMTCPVTG+
Sbjct:   49 DSKLPFGHCRLGLQRAVDPVVSPSGHIYSKEAIYEYLLAKQEELAKMRAAWEKEQQEKATEEAFKASEEEQAKIQQFIKDQESVSRKRKNPSQ-----------------EKKDVMKKFLYAPKKAG---EIMQDP-------KSKEEKQKDLQRTSFWLPEFTPAAKKQKVEAPPKRPPSPFSRRPLRLKDLVPIKLKV---------LEGTSGREAKFVCQVSGKQITYQDTVFLRNTGVVMLKKCYDELAKPTMTCPVTGK 276          
BLAST of mRNA_P-lacustris_contig1065.593.1 vs. uniprot
Match: F0XZI5_AURAN (zf-NOSIP domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XZI5_AURAN)

HSP 1 Score: 128 bits (322), Expect = 4.910e-31
Identity = 94/266 (35.34%), Postives = 134/266 (50.38%), Query Frame = 2
Query:    2 DSQQIFGHCALCIHPAVEPMATPSGHLYCKECIVEFLLAKTQELRRQREAFEAQEKSKAMDEVTADASSRVKATREFVSTQQQLVLSKPQASESTGSDKHEGKGKKRAREEQAGFGADAATSAGKAGKEDEVVQKELTQIAVLKTKKERQEQLRTTSWWLPQFQPEGVKEVIVEPPKRPASPMSGEPLRPKDLIPVIFTIDSEKEKTAHLSGGEGNRGSI--ICPITRKGIISQKAVLIKRTGHVMLEDAAKRFAL-PTMTCPVTG 790
            DSQ  FG CAL + PAV+P+ATPSGH+Y +E I+E L+ K  EL+R RE +EA++ + A  E  A A +      EF      LV   P A++          G KRAR +   +      +  K G  + V +                  L  TS+WLP F PE   + + EPP+RP SPM+G PLR KDL    + +D  K ++A  S  + +   +  +C ++   I +Q  +LI+ TG V+LE  A R  L     CPV+G
Sbjct:   11 DSQLPFGWCALSLRPAVDPVATPSGHVYSREAILEHLVTKQAELKRARELWEAEQAADARREREASARNDETLLLEFEQANDPLVRDAPAAAKP---------GPKRARLDDGSYSHSNFAAPVKTGSTELVAE------------------LSRTSYWLPSFTPEAPAKKLAEPPRRPPSPMTGAPLRSKDL----YKLDLRKAESAKTSRNDHDGSDVRYLCHVSGDEITTQNVLLIRNTGCVVLEPVATRLGLMKEKRCPVSG 245          
BLAST of mRNA_P-lacustris_contig1065.593.1 vs. uniprot
Match: W7T0X4_9STRA (Nitric oxide synthase-interacting protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T0X4_9STRA)

HSP 1 Score: 128 bits (322), Expect = 4.240e-30
Identity = 97/308 (31.49%), Postives = 144/308 (46.75%), Query Frame = 2
Query:    2 DSQQIFGHCALCIHPAVEPMATPSGHLYCKECIVEFLLAKTQELRRQREAFEAQEKSKAMDEVTADASSRVKATREFVSTQQQLVLSKPQASESTGSDKHEGKGKKRAREEQAGFGADAATSAGKAGKEDEVVQ-------------------------KELTQIAVLKTKKERQEQLRTTSWWLPQFQPEGVKEVIVEPPKRPASPMSGEPLRPKDLIPVIFTIDSEKEKTAHLSGGEGNRGSIICPITRKGIISQKAVLIKR------------------TGHVMLEDAAKRFALPTMTCPVTGEA 796
            DSQQ FG+C L + P  +P+ +PSGH+Y +E IVE+LL+KTQ+L+RQR  +E Q   +      A    + K    FV  Q                   EG+G   ++  +     D ++   +      +VQ                         ++L+++ + +  K +QE ++ TS+W+P   PE     I +P  RP SPM+G+PLR KDL+P+   +D E             RG  +C ++RK I SQ AV IKR                  TG V+LE  A+  A P+MTCPVTG+A
Sbjct:   75 DSQQPFGYCCLTLRPVTDPVVSPSGHIYSREAIVEYLLSKTQDLKRQRVLYEQQRGEEQERMEAALNEEKEKDVHRFVERQTSTF---------------EGQGSSMSKTLRRRIARDISSRIVRGTFLSLIVQNQSETRLTDSCARSPCGWSPTHTGVQQLSKV-IHRDLKTKQEDVKKTSFWVPVCTPEAKNTAIEKPATRPRSPMTGDPLRAKDLLPLPLMVDPEWRNE------HDGRGKFLCAVSRKAITSQPAVFIKRYESGMGKKMTIKKVKNENTGVVVLESIAQELAYPSMTCPVTGKA 360          
BLAST of mRNA_P-lacustris_contig1065.593.1 vs. uniprot
Match: A0A7S2SML4_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SML4_9STRA)

HSP 1 Score: 124 bits (310), Expect = 4.250e-29
Identity = 89/264 (33.71%), Postives = 137/264 (51.89%), Query Frame = 2
Query:    2 DSQQIFGHCALCIHPAVEPMATPSGHLYCKECIVEFLLAKTQELRRQREAFEAQEKSKAMDEVTADASSRVKATREFVSTQQQLVLSKPQASESTGSDKHEGKGKKRAREEQAGFGADAATSAGKAGKEDEVVQKELTQIAVLKTKKERQEQLRTTSWWLPQFQPEGVKEVIVEPPKRPASPMSGEPLRPKDLIPVIFTIDSEKEKTAHLSGGEGNRGSIICPITRKGIISQKAVLIKRTGHVMLEDAAKRFALPTMTCPVTGE 793
            DSQ  FG+C L + P  +P+ TPSGH+Y +E ++E+LL K QE +RQ+  FEAQE  +  +          +A + FVS Q  L  ++P+              +KR R         +A  A    +E +    EL++    ++ K     L+ TS+W+P+F P   +E    PP+RP SPM+G+PLR KDL    + +D +++     SG    +   IC ++ K I  Q AVL+++   V+LE   K    PTM CP+TG+
Sbjct:   25 DSQLSFGYCCLSLTPVKDPVVTPSGHMYSREYMLEYLLTKKQEAKRQQALFEAQEAHRQAEXXXXXXXXADEAVKAFVSGQTALGAAEPE--------------RKRQR-------TSSAVDAEVELEEKKAAVAELSKAVGTRSTKT---DLKRTSYWVPEFTPVHREEKAKPPPERPPSPMTGQPLRMKDL----YDVDLQEDDAT--SGSLDKK--YICAVSHKQITFQPAVLLRKAKKVILESMYKDLVAPTMICPITGD 256          
BLAST of mRNA_P-lacustris_contig1065.593.1 vs. uniprot
Match: A0A4D9D4L9_9STRA (zf-NOSIP domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D4L9_9STRA)

HSP 1 Score: 128 bits (321), Expect = 9.530e-29
Identity = 88/264 (33.33%), Postives = 133/264 (50.38%), Query Frame = 2
Query:    2 DSQQIFGHCALCIHPAVEPMATPSGHLYCKECIVEFLLAKTQELRRQREAFEAQEKSKAMDEVTADASSRVKATREFVSTQQQLVLSKPQASESTGSDKHEGKGKKRAREEQAGFGADAATSAGKAGKEDEVVQKELTQIAVLKTKKERQEQLRTTSWWLPQFQPEGVKEVIVEPPKRPASPMSGEPLRPKDLIPVIFTIDSEKEKTAHLSGGEGNRGSIICPITRKGIISQKAVLIKRTGHVMLEDAAKRFALPTMTCPVTGE 793
            DSQQ FG+C L + P  +P+ +PSGH+Y +E IVE+LL+KTQ+L+RQR  +E Q + +      A    + K    FV  Q           E+     HE   ++  R+                      ++++L+++ + +  K +QE ++ TS+W+P   PE     I +P  RP SPM+G+PLR KDL+P+   +D E             RG  +C ++RK I SQ AV IK TG V+LE  A+  A P+      GE
Sbjct:   35 DSQQPFGYCCLTLKPVTDPVVSPSGHIYSREAIVEYLLSKTQDLKRQRVLYEQQREEEQERIEAALNEEKEKDVHRFVERQTSTF------EEAAPRQGHEQNPQEENRQR--------------------YIKQQLSKV-IHRDLKTKQEDVKKTSFWVPVCTPEAKNTAIEKPATRPRSPMTGDPLRGKDLLPLPLMVDPEWRNE------HDGRGKFLCAVSRKAITSQPAVFIKSTGVVVLESIAQELAYPSWQRSGVGE 265          
BLAST of mRNA_P-lacustris_contig1065.593.1 vs. uniprot
Match: A0A7S2UPF1_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UPF1_9STRA)

HSP 1 Score: 119 bits (299), Expect = 9.580e-28
Identity = 95/281 (33.81%), Postives = 140/281 (49.82%), Query Frame = 2
Query:    2 DSQQIFGHCALCIHPAVEPMATPSGHLYCKECIVEFLLAKTQELRRQREAFEAQEKSKAMDEVTADASSRVKATREFVSTQQQLVLSKPQASESTGSDKHEGKGKKRAREEQAGFGADAATSAGKAGKEDEVVQKELTQIAVLKTKKERQEQLRTTSWWLPQFQP--EGVKEVIVEPPKRPASPMSGEPLRPKDLIPVIFTIDSEKEKTAHLSGGEGNRGSIICPITRKGIISQKAVLIKRTGHVMLEDAAKRFALPTMTCPVTGEAEVVMCHVMRVLHGS 838
            DSQQ FG+C L + PA +P+ATPSGH+Y +E IV +LL KTQ+ ++   A+E ++        T  ++ R K T+E    ++QL              + E K K              A+    A     +V    TQI  L++++     L+ TS+WL + QP  + + +    PPKRPASPMSGEPLR KDL P+    D              + G   C ++ K + +Q  V I ++G VML+      A PTMTCP+TG+ +    HV+ +  GS
Sbjct:   36 DSQQKFGYCCLGLQPAADPVATPSGHIYNREAIVSYLLTKTQDYKKALAAYEGRQ--------TQRSAKRQKLTKE--KEEEQLA-------------QFERKNK-------------GASQLSDATHSQALVA--TTQIN-LESRETATATLKRTSYWLSEMQPAQQDILDTDELPPKRPASPMSGEPLRIKDLTPLDLRTD--------------DAGGFTCAVSDKSLTTQPVVAITKSGQVMLKSVFDELARPTMTCPITGK-KFKEKHVLTLQKGS 262          
BLAST of mRNA_P-lacustris_contig1065.593.1 vs. uniprot
Match: A0A7S0KBE0_9STRA (Hypothetical protein n=2 Tax=Leptocylindrus aporus TaxID=1398097 RepID=A0A7S0KBE0_9STRA)

HSP 1 Score: 117 bits (294), Expect = 4.980e-27
Identity = 85/267 (31.84%), Postives = 131/267 (49.06%), Query Frame = 2
Query:    2 DSQQIFGHCALCIHPAVEPMATPSGHLYCKECIVEFLLAKTQELRRQREAFE---AQEKSKAMDEVTADASSRVKATREFVSTQQQLVLSKPQASESTGSDKHEGKGKKRAREEQAGFGADAATSAGKAGKEDEVVQKELTQIAVLKTKKERQEQLRTTSWWLPQFQPEGVKEVIVEPPKRPASPMSGEPLRPKDLIPVIFTIDSEKEKTAHLSGGEGNRGSIICPITRKGIISQKAVLIKRTGHVMLEDAAKRFALPTMTCPVTGE 793
            D+QQ FGHC L +  A +P+AT SGH+Y +E IV +LL K QE++ QR A+E   A+E+ K M+E    A+ RV +   FV+  +  +            D+H                                ++K+L +   +++   ++  L+ +S+WL Q  P+ V+E +  PP RP SPMSG PLR KDLI +   +D +               +  C ++ K + +Q+ V I  T  V+L+D     ALPT  CPVTG+
Sbjct:   35 DAQQKFGHCCLTLQLAKDPVATASGHIYSREAIVSYLLTKNQEIKEQRAAYEKQLAEEERKKMNERDRTAADRVTS---FVNRNEGAIQ--------VSRDRH-----------------------------GSTLEKQLAKKIDVESNDSKKTCLKRSSYWLSQNAPDHVEEKLSAPPDRPPSPMSGRPLRLKDLISLDCKVDEDGR-------------NFQCAVSGKTLSTQEVVAITNTKQVILKDVFDSLALPTKICPVTGQ 248          
BLAST of mRNA_P-lacustris_contig1065.593.1 vs. uniprot
Match: K8YSP8_NANGC (Nitric oxide synthase interacting protein (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YSP8_NANGC)

HSP 1 Score: 115 bits (287), Expect = 1.990e-26
Identity = 80/238 (33.61%), Postives = 123/238 (51.68%), Query Frame = 2
Query:    2 DSQQIFGHCALCIHPAVEPMATPSGHLYCKECIVEFLLAKTQELRRQREAFEAQEKSKAMDEVTADASSRVKATREFVSTQQQLVLSKPQASESTGSDKHEGKGKKRAREEQAGFGADAATSAGKAGKEDEVVQKELTQIAVLKTKKERQEQLRTTSWWLPQFQPEGVKEVIVEPPKRPASPMSGEPLRPKDLIPVIFTIDSEKEKTAHLSGGEGNRGSIICPITRKGIISQKAVLIK 715
            DSQQ FG+C L + P  +P+ +PSGH+Y +E IVE+LL+KTQ+L+RQR  +E Q + +      A    + K    FV  Q        +A+   G  KHE   ++  R+                      ++++L+++ + +  K +QE ++ TS+W+P   PE     I +P  RP SPM+G+PLR KDL+P+   +D E             RG  +C ++RK I SQ AV IK
Sbjct:   35 DSQQPFGYCCLTLKPVTDPVVSPSGHIYSREAIVEYLLSKTQDLKRQRVLYEQQREEEQERMEAALNEEKEKDVHRFVERQTSTF---EEAAPRQG--KHEQNPQEENRQR--------------------YIKQQLSKV-IHRDLKTKQEDVKKTSFWVPVCTPEAKNTAIEKPATRPRSPMTGDPLRAKDLLPLPLMVDPEWRNE------HDGRGKFLCAVSRKAITSQPAVFIK 240          
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig1065.593.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LL50_ECTSI6.030e-14681.82zf-NOSIP domain-containing protein n=2 Tax=Ectocar... [more]
A0A836CI14_9STRA2.510e-5039.93zf-NOSIP domain-containing protein (Fragment) n=1 ... [more]
A0A7S3Y8P7_9EUKA8.030e-3534.47Hypothetical protein n=2 Tax=Lotharella globosa Ta... [more]
F0XZI5_AURAN4.910e-3135.34zf-NOSIP domain-containing protein n=1 Tax=Aureoco... [more]
W7T0X4_9STRA4.240e-3031.49Nitric oxide synthase-interacting protein n=1 Tax=... [more]
A0A7S2SML4_9STRA4.250e-2933.71Hypothetical protein n=2 Tax=Rhizochromulina marin... [more]
A0A4D9D4L9_9STRA9.530e-2933.33zf-NOSIP domain-containing protein n=1 Tax=Nannoch... [more]
A0A7S2UPF1_9STRA9.580e-2833.81Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A7S0KBE0_9STRA4.980e-2731.84Hypothetical protein n=2 Tax=Leptocylindrus aporus... [more]
K8YSP8_NANGC1.990e-2633.61Nitric oxide synthase interacting protein (Fragmen... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig1065contigP-lacustris_contig1065:62163..67391 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score392.5
Seed ortholog evalue1.7e-106
Seed eggNOG ortholog2880.D8LL50
Preferred nameNOSIP
KEGG koko:K12857,ko:K13125
KEGG Pathwayko03040,map03040
KEGG ModuleM00354,M00355
Hectar predicted targeting categoryother localisation
GOsGO:0000139,GO:0000375,GO:0000377,GO:0000398,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0004842,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005794,GO:0005829,GO:0006139,GO:0006396,GO:0006397,GO:0006464,GO:0006725,GO:0006807,GO:0007275,GO:0008150,GO:0008152,GO:0008380,GO:0009314,GO:0009416,GO:0009628,GO:0009639,GO:0009640,GO:0009791,GO:0009892,GO:0009987,GO:0010467,GO:0012505,GO:0016020,GO:0016070,GO:0016071,GO:0016567,GO:0016604,GO:0016607,GO:0016740,GO:0019222,GO:0019538,GO:0019787,GO:0031090,GO:0031647,GO:0031648,GO:0031974,GO:0031981,GO:0031984,GO:0032446,GO:0032501,GO:0032502,GO:0032768,GO:0032769,GO:0034641,GO:0036211,GO:0043086,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0044092,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044431,GO:0044444,GO:0044446,GO:0044451,GO:0044464,GO:0046483,GO:0048519,GO:0048856,GO:0050789,GO:0050790,GO:0050896,GO:0050999,GO:0051001,GO:0051341,GO:0051354,GO:0061630,GO:0061659,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070647,GO:0071704,GO:0090304,GO:0097159,GO:0098588,GO:0098791,GO:0140096,GO:1901360,GO:1901363,GO:1901564
EggNOG free text desc.ubiquitin protein ligase activity
EggNOG OGsKOG3039@1,KOG3039@2759
COG Functional cat.A
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko03041
Exons7
Model size1096
Cds size855
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815339.1958683-UTR-P-lacustris_contig1065:62162..623451622815339.1958683-UTR-P-lacustris_contig1065:62162..62345Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig1065 62163..62345 -
1693493486.12111-UTR-P-lacustris_contig1065:62162..623451693493486.12111-UTR-P-lacustris_contig1065:62162..62345Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig1065 62163..62345 -
1622815339.3078084-UTR-P-lacustris_contig1065:67333..673911622815339.3078084-UTR-P-lacustris_contig1065:67333..67391Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig1065 67334..67391 -
1693493486.1933954-UTR-P-lacustris_contig1065:67333..673911693493486.1933954-UTR-P-lacustris_contig1065:67333..67391Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig1065 67334..67391 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815339.212157-CDS-P-lacustris_contig1065:62345..625411622815339.212157-CDS-P-lacustris_contig1065:62345..62541Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1065 62346..62541 -
1693493486.132228-CDS-P-lacustris_contig1065:62345..625411693493486.132228-CDS-P-lacustris_contig1065:62345..62541Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1065 62346..62541 -
1622815339.2280924-CDS-P-lacustris_contig1065:63200..632981622815339.2280924-CDS-P-lacustris_contig1065:63200..63298Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1065 63201..63298 -
1693493486.1398683-CDS-P-lacustris_contig1065:63200..632981693493486.1398683-CDS-P-lacustris_contig1065:63200..63298Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1065 63201..63298 -
1622815339.2429056-CDS-P-lacustris_contig1065:63642..637381622815339.2429056-CDS-P-lacustris_contig1065:63642..63738Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1065 63643..63738 -
1693493486.1481483-CDS-P-lacustris_contig1065:63642..637381693493486.1481483-CDS-P-lacustris_contig1065:63642..63738Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1065 63643..63738 -
1622815339.2558465-CDS-P-lacustris_contig1065:64372..644891622815339.2558465-CDS-P-lacustris_contig1065:64372..64489Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1065 64373..64489 -
1693493486.1572075-CDS-P-lacustris_contig1065:64372..644891693493486.1572075-CDS-P-lacustris_contig1065:64372..64489Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1065 64373..64489 -
1622815339.2661362-CDS-P-lacustris_contig1065:65195..652971622815339.2661362-CDS-P-lacustris_contig1065:65195..65297Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1065 65196..65297 -
1693493486.1671987-CDS-P-lacustris_contig1065:65195..652971693493486.1671987-CDS-P-lacustris_contig1065:65195..65297Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1065 65196..65297 -
1622815339.2800202-CDS-P-lacustris_contig1065:65912..660401622815339.2800202-CDS-P-lacustris_contig1065:65912..66040Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1065 65913..66040 -
1693493486.177012-CDS-P-lacustris_contig1065:65912..660401693493486.177012-CDS-P-lacustris_contig1065:65912..66040Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1065 65913..66040 -
1622815339.2965834-CDS-P-lacustris_contig1065:67215..673331622815339.2965834-CDS-P-lacustris_contig1065:67215..67333Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1065 67216..67333 -
1693493486.1851768-CDS-P-lacustris_contig1065:67215..673331693493486.1851768-CDS-P-lacustris_contig1065:67215..67333Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1065 67216..67333 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig1065.593.1prot_P-lacustris_contig1065.593.1Pleurocladia lacustris SAG_25_93polypeptideP-lacustris_contig1065 62346..67333 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-lacustris_contig1065.593.1

>prot_P-lacustris_contig1065.593.1 ID=prot_P-lacustris_contig1065.593.1|Name=mRNA_P-lacustris_contig1065.593.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=285bp
MATPSGHLYCKECIVEFLLAKTQELRRQREAFEAQEKSKAMDEVTADASS
RVKATREFVSTQQQLVLSKPQASESTGSDKHEGKGKKRAREEQAGFGADA
ATSAGKAGKEDEVVQKELTQIAVLKTKKERQEQLRTTSWWLPQFQPEGVK
EVIVEPPKRPASPMSGEPLRPKDLIPVIFTIDSEKEKTAHLSGGEGNRGS
IICPITRKGIISQKAVLIKRTGHVMLEDAAKRFALPTMTCPVTGEAEVVM
CHVMRVLHGSRVTTRVNLRALFFGTLHTGLCPLA*
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mRNA from alignment at P-lacustris_contig1065:62163..67391-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-lacustris_contig1065.593.1 ID=mRNA_P-lacustris_contig1065.593.1|Name=mRNA_P-lacustris_contig1065.593.1|organism=Pleurocladia lacustris SAG_25_93|type=mRNA|length=5229bp|location=Sequence derived from alignment at P-lacustris_contig1065:62163..67391- (Pleurocladia lacustris SAG_25_93)
AGACTCGCAGCAGATATTCGGACACTGTGCGCTCTGCATACACCCTGCCG TCGAGCCCATGGCCACACCGTCCGGCCACTTGTACTGCAAAGAGTGCATC GTCGAGTTCCTGCTCGCAAAGACGCAGGAGTTGAGGCGGCAGAGGGAGGC GTTCGAAGCGCAGGAGAAAAGTAAAGGTGAGTTCGAAGATTGAAGAAGAA TTGGTGTATATTTCAAGTAGCTGTTGAAGGCGGACGAGTCGGCCAAGAAG AGAGTCGAGGTCACGGTAAGTGTTCTTTTTTCGTTTCGCTTGGTTGACTC ATCACCCGGGGTACGGTACTAGATTATGGTAGTAGAGTAGTGTGTATCAC AGTGTGCAAGAACAACAACAACAGTAGCAACAGCAACAACAACACCGATA CCAACGACAACAACAACAACATGGCAACAGAGCTACTACTATTCAAGGCC GAACGACGAAGAGTCAAGGGACCGCCCTGTTTACATCCTGAACGAACATG GGAGCAACCAGACACCCCCACGCATCTTATGGGCCTGCTGGCTCATGGCC GACGCTTTAAACTCTACGAGTAGTCTCCTAACCCTAACAACAACAGTAGC GAAAACAACGAGAACAGCAACAGCAATAGTCTCACTGCAAACACCCCACT ATGCATCAGGCATGAGGGCGCGGCTCCAGATGTGTGGTGTCCTTCATGGT GATTTCGCGTACAGCTATCATGTATCATACATCGCTGTCGTTCGTGTTTC AGAGCAGTTCGTTTCAGTTGTGTTCAATAGGCTGGCTCTCCGCCGTCGAT ACAGCTGTACTGCTGTTTTGTGGGTCCTCGAGGTGTCCCGCCTGCTGGCT AGCCGATGTTCTCGGTGTCAAAATAGCAACCTTACCTTACCCCCCTTCTA CGAGTATATTCTATATATATCTCGAGTCACGAACGAACGAGTTGGCTGCG GCACACGAGTCCACTCATGCTCCCGGCAATACACATCAGGTTGTCGGCAT TCCCATTGTCATATCTATCCTGTTTGTCTAGGTACCCAATCTGGGTTCCC TCATCTCGATGGCTGGCGTTTTGCCGTTGCACGCATGGCATCATGACATC CGCACTGGACGATCTTCAGCGTGTCGTTGTGTCCCTCAACGACCATTACT CTGAATGTACATCAATGGTTCAAATGTAATCAAAGTGTCTGCACGCTTGT CCTCATCTCTCTCTACCTTTGTATTTCTGTCGTTTTTTTTGCCTTTGCTG TTGGTTGATACCCTTGATGCCTTTGATGCCTCGCATTCCCTGACATCACA TGATATTCCTTGTGATGCATGCTGAATCTATTTGCATTGCATTGTAATCA GCCATGGACGAGGTGACGGCAGACGCGAGTTCAAGGGTGAAGGCCACAAG GGAGTTCGTTTCGACGCAGCAACAGCTCGTCCTCTCCAAGCCCCAAGCAA GCGAATCAACAGGCTCCGACAAACACGAGGTACTTTATCGTCCCATCCCC GTTTTGGGAAAAGTATTAGCTCGTTTCAATCTAGTGCTGTCTTTTTTTTT CCGAGAATTTGCGCACATCATTTTTCTCGTTTATACACAGAGAGAGCAGA TATCTGGTGTGAACGTAGGCATAGATGGTGTAGTCGTGTACTCCGTACCC ACACGGCGTCCAGCATGTATCATAGTTGTAAACTACTTGACAAATCACAA ATGCGATGTGAACATTAGCAATGGCTCCTCCCTGCTAGGTTATTGGTATT ACAAGACGAGCACATGCACATTTGGACCTCAAGTGTCGATGATGCAAGGG AATCTTTGTGGAGTATAAAGTATCTTTCTTACAAGCATCACCAAAGTGCT TGTCCTTGATTGTCGCGTTATGCGATGCGTACATGCACACAAGGTTTTTG ATTTTCTTAAAATTATGTTTGTTTTCCAAATGTCGTTGCTTGTGCCCAAT TAAATGCTAAACATACTCAAAAGCAGTTGATCTTCCCGTCGTTTCAAGAA GTTATCACTCGAGTATGTCAAACATGAGGCGGAACAAACAGTTGGACACA TATTGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCTTTAGGGCAAA GGGAAGAAGCGCGCGAGGGAGGAGCAAGCAGGGTTTGGGGCAGATGCGGC AACGTCGGCAGGGAAGGCGGGCAAAGAGGATGAGGTCGTTCAGAAGGTAA AACAACGCACCAGATATGTACTCGAGGGATTGCAATAGGGGGAGAAAACG AAGCACACTTTGTGAGTTGGAAGTTGTTTGAAGTTTGAAGGGAGAGGTCA ATCAAGCCAAAGATGTTTGCCGCATAGTGTATAACTTGTCACGATGTCGG AGGTACTGTGTATAGGGAGCAAACGGATCGAGGGTATCCAAGAAGATGAG ATTGATGAGATTGTCATCACTTCACGAAGAACACTGTTGAGCTAGTGTTG GTGTTGGTGTTGTTGTTAGCCACAATGGAAACAAGTTAATTGTATAGGGT TAGGGTTAGGGTTAGGGTTAACCCTAACCCTAATTGTATAGCAAGATTAC AAGATCGGCCAAGCGACAAGACTTGCTGTCTTGCGCTGCGCTGTACACCT TGGGCCGCTCAGAAGGGACATGTGTTTCGAAAATCAGGTGTTTGCAGATG GACTGAAGAAATCGTCACGATTTTTTGTAGACGAGCAATGCCTGAGCCGA CTCAAGTCGGACCATAATTTTTTACGCACGTTATGATTGTCGAATGCTTT CACCAGCTGCAGACTAGCTACTGTAACACATCGTTTTTTTGTCACATATT TTGTCGCGACTTGAACGGCCGCAATTCCTATTGGAGGTGAGGTAAGCGAT GTAATCCTTGCGCCACTCGACGGCTACTTTGATTGTTCGCCTTCTCTTTC AGGAACTGACTCAAATCGCGGTTCTCAAGACGAAGAAGGAGCGCCAAGAG CAGCTCAGAACAACCAGCTGGTGGCTGCCACAGTTTCAGCCGGAGGGCGT CAAGGAAGTCATCGTGGAGGTCGGTTTCCCTTTCAAGCAGTCGCGCGCTC TGTTCGAAGGATGTTGTTGTGACGATGCTCTTGCTCGTTGCGAGCTACCC GTGCACGACCTGGTCTGAACTTGTTCAACTATGGACCGAAAACTCTGTTC CCACGAGCATGGATATTGTACGGGGCAACGGATCGTTCACGCACCTTGGT CTGATTTTGATACAACCGTGGCAGTTGCTGCTCGGTGGCACTACAAGTAA GGAGGTTCTATTGCCATCAAGAGCTTGAATTTTTACGAACGGTCTAGAGC TCGAATCACGTCTGTACTCTTTTCTGCTGGTTGTTTGTTGTCGCAACTTA TAGCGTGTTTGTCTAATCCTGGCGGGGTGATGTGCACTTGTTTCCCGCTA CGTACGAGGTTTCAGTTTTGTGTTGCGTAGCGCCTGGGCGGTGCTTGGTG TACAGGACCTGGAGTTAAGCCGGCAAGGAGTGGTGCGCTCGCATCCGAAG GCTATCTTGTTTCGTAGGCTCCTAGGGCGTGAAAGTAATTTGGTGGTTGG AGATGACTGTTAGTGTTTGGTGAAGGCAGGAAGGAACCCCCATACATGAA TGTGCAAGTCTTTGCTGACACCGTGGATGACGCTTTCTGTTTTTTTCGCG CAGCCGCCCAAGCGCCCGGCAAGCCCCATGTCCGGCGAGCCTCTTAGGCC CAAGGACCTTATTCCTGTGATCTTCACGATTGACAGCGAAAAGGAAAAGG CAAGAGGAATGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGAAAG CTTTTCGCGATCATTTTGGATGGCTGTTTTTGGGAACACAAGAAGATAGT GAAACCAAGCGACGGAGGTTAAGCTCGTAGCCCACTAGTTTTGACGACGC ACGGTGACGAGGAGGTACACCCTCTGAGTGTGCTTCTCATGCGCCAAAGC CATAAATCGGATTTGTCCGATTTCTGTCTGTCAGACAGGAGTGTAGTGTG TCACATCAACTGTATTGTTTTCTGCAAAGTTTGAAGTTTGTTTTCATACG CTGACCGTGCTCCACAACTACTGCGTCTTGCTGGCCATGACAGACGGCGC ATCTCTCTGGCGGGGAGGGGAACCGGGGCAGCATCATCTGCCCCATTACG CGGAAGGGTATCATCTCGCAGAAGGCGGTGCTTATCAAGAGGTGTGCACG CAATGCCACCCCATCCAATCCTATCATCGTTAGGCCGTATTCTATTGCAT AGTGCTCCCCGCTCAGACTATACCCACACGCTTTGCTGAGAAAGGGTTAG GGTTAGGGTCGCGTTTTCTTGTTTTTTGCAGACTCAAGCCGGCGGCACTA CTGTTCGCTCAAGGCACTACCGCAGTACCCTTCGGGTGTCGACATCCGCA CTCGTCCCTTGCTCGCAGAGAAAGTTTTTCTTGCCGAGGTGTGTATTCCG TGCTGCTTACTGGCACATTTTCGGCTTACAACAGAGGAGCCCCGTCTAAG AGACGAGTCGAGATGCGCATGTGATTCTCAAGAGTCACGATTCAGATGCG ATTCACTCCTTTCTGATTTGTAGCGGACCAACGTTTTGTTCGTCTGCATT GCCGTTTTGCCAATGTTCTCGAGACGTGAATCAATTTTGTATTGCACCGC ATTGTCCTTTCTCTGGCAGGACATGATATGACATGATATGGCGATGCCGC ACCTGTTCTTAGGTTCCGTTCGTTTTTTTATTCTTATGTGTACCTTTGTG TGCATATACATTTTTTACGTACTGTAAGGTGCCTTGAAATTGATGCTCAG TGCATCTACTTGTACCCGCGCTGTGCGTTGGTTTGTTTGTTGCCACCTAG GACGGGACACGTGATGCTGGAGGATGCCGCCAAGCGATTTGCGTTGCCAA CAATGACCTGCCCCGTCACGGGTGAGGCCGAGGTTGTTATGTGTCATGTC ATGCGAGTGTTACATGGGTCACGGGTTACCACACGGGTTAACTTACGGGC GCTCTTTTTCGGCACGTTGCATACAGGGCTCTGCCCCTTGGCCTAGCGTC GCATCCATTGCAAACCACCGTAGTGTGAGTTTCGCCAGGAGCTACACCAA TGACCACCAATGCGGTCCACGTTCATTGTTTATTGTGCTGTTCTGTTTTT GTTTTTCAGGGGAGAAATTCAAGGCCAAAGACTTAATCGCCCTCGTTAAT GGAGGAACTTCCTTCACGGCCAGCGGCCA
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Coding sequence (CDS) from alignment at P-lacustris_contig1065:62163..67391-

>mRNA_P-lacustris_contig1065.593.1 ID=mRNA_P-lacustris_contig1065.593.1|Name=mRNA_P-lacustris_contig1065.593.1|organism=Pleurocladia lacustris SAG_25_93|type=CDS|length=1710bp|location=Sequence derived from alignment at P-lacustris_contig1065:62163..67391- (Pleurocladia lacustris SAG_25_93)
ATGGCCACACCGTCCGGCCACTTGTACTGCAAAGAGTGCATCGTCGAGTT
CCTGCTCGCAAAGACGCAGGAGTTGAGGCGGCAGAGGGAGGCGTTCGAAG
CGCAGGAGAAAAGTAAAGATGGCCACACCGTCCGGCCACTTGTACTGCAA
AGAGTGCATCGTCGAGTTCCTGCTCGCAAAGACGCAGGAGTTGAGGCGGC
AGAGGGAGGCGTTCGAAGCGCAGGAGAAAAGTAAAGCCATGGACGAGGTG
ACGGCAGACGCGAGTTCAAGGGTGAAGGCCACAAGGGAGTTCGTTTCGAC
GCAGCAACAGCTCGTCCTCTCCAAGCCCCAAGCAAGCGAATCAACAGGCT
CCGACAAACACGAGCCATGGACGAGGTGACGGCAGACGCGAGTTCAAGGG
TGAAGGCCACAAGGGAGTTCGTTTCGACGCAGCAACAGCTCGTCCTCTCC
AAGCCCCAAGCAAGCGAATCAACAGGCTCCGACAAACACGAGGGCAAAGG
GAAGAAGCGCGCGAGGGAGGAGCAAGCAGGGTTTGGGGCAGATGCGGCAA
CGTCGGCAGGGAAGGCGGGCAAAGAGGATGAGGTCGTTCAGAAGGGCAAA
GGGAAGAAGCGCGCGAGGGAGGAGCAAGCAGGGTTTGGGGCAGATGCGGC
AACGTCGGCAGGGAAGGCGGGCAAAGAGGATGAGGTCGTTCAGAAGGAAC
TGACTCAAATCGCGGTTCTCAAGACGAAGAAGGAGCGCCAAGAGCAGCTC
AGAACAACCAGCTGGTGGCTGCCACAGTTTCAGCCGGAGGGCGTCAAGGA
AGTCATCGTGGAGGAACTGACTCAAATCGCGGTTCTCAAGACGAAGAAGG
AGCGCCAAGAGCAGCTCAGAACAACCAGCTGGTGGCTGCCACAGTTTCAG
CCGGAGGGCGTCAAGGAAGTCATCGTGGAGCCGCCCAAGCGCCCGGCAAG
CCCCATGTCCGGCGAGCCTCTTAGGCCCAAGGACCTTATTCCTGTGATCT
TCACGATTGACAGCGAAAAGGAAAAGCCGCCCAAGCGCCCGGCAAGCCCC
ATGTCCGGCGAGCCTCTTAGGCCCAAGGACCTTATTCCTGTGATCTTCAC
GATTGACAGCGAAAAGGAAAAGACGGCGCATCTCTCTGGCGGGGAGGGGA
ACCGGGGCAGCATCATCTGCCCCATTACGCGGAAGGGTATCATCTCGCAG
AAGGCGGTGCTTATCAAGAGACGGCGCATCTCTCTGGCGGGGAGGGGAAC
CGGGGCAGCATCATCTGCCCCATTACGCGGAAGGGTATCATCTCGCAGAA
GGCGGTGCTTATCAAGAGGACGGGACACGTGATGCTGGAGGATGCCGCCA
AGCGATTTGCGTTGCCAACAATGACCTGCCCCGTCACGGGTGAGGCCGAG
GTTGTTATGTGTCATGTCATGCGAGTGTTACATGGGTCACGGGTTACCAC
ACGGGTTAACTTACGGGCGCTCTTTTTCGGCACGTTGCATACAGGGCTCT
GCCCCTTGGCCTAGGACGGGACACGTGATGCTGGAGGATGCCGCCAAGCG
ATTTGCGTTGCCAACAATGACCTGCCCCGTCACGGGTGAGGCCGAGGTTG
TTATGTGTCATGTCATGCGAGTGTTACATGGGTCACGGGTTACCACACGG
GTTAACTTACGGGCGCTCTTTTTCGGCACGTTGCATACAGGGCTCTGCCC
CTTGGCCTAG
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