mRNA_P-lacustris_contig1065.593.1 (mRNA) Pleurocladia lacustris SAG_25_93
|
Overview
Homology
BLAST of mRNA_P-lacustris_contig1065.593.1 vs. uniprot
Match: D8LL50_ECTSI (zf-NOSIP domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LL50_ECTSI) HSP 1 Score: 425 bits (1092), Expect = 6.030e-146 Identity = 216/264 (81.82%), Postives = 242/264 (91.67%), Query Frame = 2
Query: 2 DSQQIFGHCALCIHPAVEPMATPSGHLYCKECIVEFLLAKTQELRRQREAFEAQEKSKAMDEVTADASSRVKATREFVSTQQQLVLSKPQASESTGSDKHEGKGKKRAREEQAGFGADAATSAGKAGKEDEVVQKELTQIAVLKTKKERQEQLRTTSWWLPQFQPEGVKEVIVEPPKRPASPMSGEPLRPKDLIPVIFTIDSEKEKTAHLSGGEGNRGSIICPITRKGIISQKAVLIKRTGHVMLEDAAKRFALPTMTCPVTGE 793
DSQQ FGHC+LCIHPAVEPMATPSGH+YCKECIVEFLL KTQEL+RQREAFEAQ+K +A DEV+ADAS RV+AT +FVS QQQLV++KPQA++ + S K EGKGKKR REEQ G GADA+ +GK GK D VV+KEL+QIAVLK+KKERQ+QLR TSWWLPQFQPEGVKE IV+PPKRP SPMSGEPLRPKDLIPVIFT+DSEK+KTAH+SGG+GNRGSIICP+TRKGIISQKAVLIKRTGHVMLEDAAK+FALPTMTCPVTGE
Sbjct: 39 DSQQTFGHCSLCIHPAVEPMATPSGHVYCKECIVEFLLTKTQELKRQREAFEAQQKDQATDEVSADASRRVEATNDFVSNQQQLVVTKPQATKPSDSGKSEGKGKKRGREEQTGVGADASAPSGKEGKRDHVVEKELSQIAVLKSKKERQDQLRMTSWWLPQFQPEGVKEAIVQPPKRPGSPMSGEPLRPKDLIPVIFTLDSEKKKTAHISGGDGNRGSIICPVTRKGIISQKAVLIKRTGHVMLEDAAKQFALPTMTCPVTGE 302
BLAST of mRNA_P-lacustris_contig1065.593.1 vs. uniprot
Match: A0A836CI14_9STRA (zf-NOSIP domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CI14_9STRA) HSP 1 Score: 181 bits (458), Expect = 2.510e-50 Identity = 119/298 (39.93%), Postives = 165/298 (55.37%), Query Frame = 2
Query: 2 DSQQIFGHCALCIHPAVEPMATPSGHLYCKECIVEFLLAKTQELRRQREAFEAQEKSKAMDEVTADASSRVKATREFVSTQQQL-----------------------------------VLSKPQASESTGSDKHEGKGKKRAREEQAGFGADAATSAGKAGKEDEVVQKELTQIAVLKTKKERQEQLRTTSWWLPQFQPEGVKEVIVEPPKRPASPMSGEPLRPKDLIPVIFTIDSEKEKTAHLSGGEGNRGSIICPITRKGIISQKAVLIKRTGHVMLEDAAKRFALPTMTCPVTG 790
DSQ FG+CA+C+ A EPMATPSGH+YC+ECI+E+LL KT++L+RQR A+EAQ++++A V ADA + ++ +FV TQ + P A+ KRA E A ++ E + V ++ + T+++ +E L+ TS+WLP PE V+E + P RP SPMSG+PLR K+LIPV FT+D KE+ SGG G +G IIC +TR+ I Q VL+ R+G VML+ AA+ FALPTM CPVTG
Sbjct: 32 DSQLPFGNCAMCLRLAKEPMATPSGHIYCRECILEYLLVKTKDLKRQRAAYEAQQQAQAERAVAADAEKQQRSVDKFVKTQGAVGPLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAAALG-----------KRAHPEDAERRLES---------EKKRVMAKMALPVDMTTREQHKEILKRTSFWLPTHAPEHVEERVAPPEARPRSPMSGDPLRAKNLIPVRFTVDGGKEEAGADSGGAG-KGRIICAVTRREIHHQPTVLLARSGQVMLKSAAEEFALPTMMCPVTG 308
BLAST of mRNA_P-lacustris_contig1065.593.1 vs. uniprot
Match: A0A7S3Y8P7_9EUKA (Hypothetical protein n=2 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3Y8P7_9EUKA) HSP 1 Score: 139 bits (350), Expect = 8.030e-35 Identity = 91/264 (34.47%), Postives = 136/264 (51.52%), Query Frame = 2
Query: 2 DSQQIFGHCALCIHPAVEPMATPSGHLYCKECIVEFLLAKTQELRRQREAFEAQEKSKAMDEVTADASSRVKATREFVSTQQQLVLSKPQASESTGSDKHEGKGKKRAREEQAGFGADAATSAGKAGKEDEVVQKELTQIAVLKTKKERQEQLRTTSWWLPQFQPEGVKEVIVEPPKRPASPMSGEPLRPKDLIPVIFTIDSEKEKTAHLSGGEGNRGSIICPITRKGIISQKAVLIKRTGHVMLEDAAKRFALPTMTCPVTGE 793
DS+ FGHC L + AV+P+ +PSGH+Y KE I E+LLAK +EL + R A+E +++ KA +E + ++F+ Q+ + + S+ E+ + KAG E++Q K+K+E+Q+ L+ TS+WLP+F P K+ + PPKRP SP S PLR KDL+P+ + L G G +C ++ K I Q V ++ TG VML+ A PTMTCPVTG+
Sbjct: 49 DSKLPFGHCRLGLQRAVDPVVSPSGHIYSKEAIYEYLLAKQEELAKMRAAWEKEQQEKATEEAFKASEEEQAKIQQFIKDQESVSRKRKNPSQ-----------------EKKDVMKKFLYAPKKAG---EIMQDP-------KSKEEKQKDLQRTSFWLPEFTPAAKKQKVEAPPKRPPSPFSRRPLRLKDLVPIKLKV---------LEGTSGREAKFVCQVSGKQITYQDTVFLRNTGVVMLKKCYDELAKPTMTCPVTGK 276
BLAST of mRNA_P-lacustris_contig1065.593.1 vs. uniprot
Match: F0XZI5_AURAN (zf-NOSIP domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XZI5_AURAN) HSP 1 Score: 128 bits (322), Expect = 4.910e-31 Identity = 94/266 (35.34%), Postives = 134/266 (50.38%), Query Frame = 2
Query: 2 DSQQIFGHCALCIHPAVEPMATPSGHLYCKECIVEFLLAKTQELRRQREAFEAQEKSKAMDEVTADASSRVKATREFVSTQQQLVLSKPQASESTGSDKHEGKGKKRAREEQAGFGADAATSAGKAGKEDEVVQKELTQIAVLKTKKERQEQLRTTSWWLPQFQPEGVKEVIVEPPKRPASPMSGEPLRPKDLIPVIFTIDSEKEKTAHLSGGEGNRGSI--ICPITRKGIISQKAVLIKRTGHVMLEDAAKRFAL-PTMTCPVTG 790
DSQ FG CAL + PAV+P+ATPSGH+Y +E I+E L+ K EL+R RE +EA++ + A E A A + EF LV P A++ G KRAR + + + K G + V + L TS+WLP F PE + + EPP+RP SPM+G PLR KDL + +D K ++A S + + + +C ++ I +Q +LI+ TG V+LE A R L CPV+G
Sbjct: 11 DSQLPFGWCALSLRPAVDPVATPSGHVYSREAILEHLVTKQAELKRARELWEAEQAADARREREASARNDETLLLEFEQANDPLVRDAPAAAKP---------GPKRARLDDGSYSHSNFAAPVKTGSTELVAE------------------LSRTSYWLPSFTPEAPAKKLAEPPRRPPSPMTGAPLRSKDL----YKLDLRKAESAKTSRNDHDGSDVRYLCHVSGDEITTQNVLLIRNTGCVVLEPVATRLGLMKEKRCPVSG 245
BLAST of mRNA_P-lacustris_contig1065.593.1 vs. uniprot
Match: W7T0X4_9STRA (Nitric oxide synthase-interacting protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T0X4_9STRA) HSP 1 Score: 128 bits (322), Expect = 4.240e-30 Identity = 97/308 (31.49%), Postives = 144/308 (46.75%), Query Frame = 2
Query: 2 DSQQIFGHCALCIHPAVEPMATPSGHLYCKECIVEFLLAKTQELRRQREAFEAQEKSKAMDEVTADASSRVKATREFVSTQQQLVLSKPQASESTGSDKHEGKGKKRAREEQAGFGADAATSAGKAGKEDEVVQ-------------------------KELTQIAVLKTKKERQEQLRTTSWWLPQFQPEGVKEVIVEPPKRPASPMSGEPLRPKDLIPVIFTIDSEKEKTAHLSGGEGNRGSIICPITRKGIISQKAVLIKR------------------TGHVMLEDAAKRFALPTMTCPVTGEA 796
DSQQ FG+C L + P +P+ +PSGH+Y +E IVE+LL+KTQ+L+RQR +E Q + A + K FV Q EG+G ++ + D ++ + +VQ ++L+++ + + K +QE ++ TS+W+P PE I +P RP SPM+G+PLR KDL+P+ +D E RG +C ++RK I SQ AV IKR TG V+LE A+ A P+MTCPVTG+A
Sbjct: 75 DSQQPFGYCCLTLRPVTDPVVSPSGHIYSREAIVEYLLSKTQDLKRQRVLYEQQRGEEQERMEAALNEEKEKDVHRFVERQTSTF---------------EGQGSSMSKTLRRRIARDISSRIVRGTFLSLIVQNQSETRLTDSCARSPCGWSPTHTGVQQLSKV-IHRDLKTKQEDVKKTSFWVPVCTPEAKNTAIEKPATRPRSPMTGDPLRAKDLLPLPLMVDPEWRNE------HDGRGKFLCAVSRKAITSQPAVFIKRYESGMGKKMTIKKVKNENTGVVVLESIAQELAYPSMTCPVTGKA 360
BLAST of mRNA_P-lacustris_contig1065.593.1 vs. uniprot
Match: A0A7S2SML4_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SML4_9STRA) HSP 1 Score: 124 bits (310), Expect = 4.250e-29 Identity = 89/264 (33.71%), Postives = 137/264 (51.89%), Query Frame = 2
Query: 2 DSQQIFGHCALCIHPAVEPMATPSGHLYCKECIVEFLLAKTQELRRQREAFEAQEKSKAMDEVTADASSRVKATREFVSTQQQLVLSKPQASESTGSDKHEGKGKKRAREEQAGFGADAATSAGKAGKEDEVVQKELTQIAVLKTKKERQEQLRTTSWWLPQFQPEGVKEVIVEPPKRPASPMSGEPLRPKDLIPVIFTIDSEKEKTAHLSGGEGNRGSIICPITRKGIISQKAVLIKRTGHVMLEDAAKRFALPTMTCPVTGE 793
DSQ FG+C L + P +P+ TPSGH+Y +E ++E+LL K QE +RQ+ FEAQE + + +A + FVS Q L ++P+ +KR R +A A +E + EL++ ++ K L+ TS+W+P+F P +E PP+RP SPM+G+PLR KDL + +D +++ SG + IC ++ K I Q AVL+++ V+LE K PTM CP+TG+
Sbjct: 25 DSQLSFGYCCLSLTPVKDPVVTPSGHMYSREYMLEYLLTKKQEAKRQQALFEAQEAHRQAEXXXXXXXXADEAVKAFVSGQTALGAAEPE--------------RKRQR-------TSSAVDAEVELEEKKAAVAELSKAVGTRSTKT---DLKRTSYWVPEFTPVHREEKAKPPPERPPSPMTGQPLRMKDL----YDVDLQEDDAT--SGSLDKK--YICAVSHKQITFQPAVLLRKAKKVILESMYKDLVAPTMICPITGD 256
BLAST of mRNA_P-lacustris_contig1065.593.1 vs. uniprot
Match: A0A4D9D4L9_9STRA (zf-NOSIP domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D4L9_9STRA) HSP 1 Score: 128 bits (321), Expect = 9.530e-29 Identity = 88/264 (33.33%), Postives = 133/264 (50.38%), Query Frame = 2
Query: 2 DSQQIFGHCALCIHPAVEPMATPSGHLYCKECIVEFLLAKTQELRRQREAFEAQEKSKAMDEVTADASSRVKATREFVSTQQQLVLSKPQASESTGSDKHEGKGKKRAREEQAGFGADAATSAGKAGKEDEVVQKELTQIAVLKTKKERQEQLRTTSWWLPQFQPEGVKEVIVEPPKRPASPMSGEPLRPKDLIPVIFTIDSEKEKTAHLSGGEGNRGSIICPITRKGIISQKAVLIKRTGHVMLEDAAKRFALPTMTCPVTGE 793
DSQQ FG+C L + P +P+ +PSGH+Y +E IVE+LL+KTQ+L+RQR +E Q + + A + K FV Q E+ HE ++ R+ ++++L+++ + + K +QE ++ TS+W+P PE I +P RP SPM+G+PLR KDL+P+ +D E RG +C ++RK I SQ AV IK TG V+LE A+ A P+ GE
Sbjct: 35 DSQQPFGYCCLTLKPVTDPVVSPSGHIYSREAIVEYLLSKTQDLKRQRVLYEQQREEEQERIEAALNEEKEKDVHRFVERQTSTF------EEAAPRQGHEQNPQEENRQR--------------------YIKQQLSKV-IHRDLKTKQEDVKKTSFWVPVCTPEAKNTAIEKPATRPRSPMTGDPLRGKDLLPLPLMVDPEWRNE------HDGRGKFLCAVSRKAITSQPAVFIKSTGVVVLESIAQELAYPSWQRSGVGE 265
BLAST of mRNA_P-lacustris_contig1065.593.1 vs. uniprot
Match: A0A7S2UPF1_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UPF1_9STRA) HSP 1 Score: 119 bits (299), Expect = 9.580e-28 Identity = 95/281 (33.81%), Postives = 140/281 (49.82%), Query Frame = 2
Query: 2 DSQQIFGHCALCIHPAVEPMATPSGHLYCKECIVEFLLAKTQELRRQREAFEAQEKSKAMDEVTADASSRVKATREFVSTQQQLVLSKPQASESTGSDKHEGKGKKRAREEQAGFGADAATSAGKAGKEDEVVQKELTQIAVLKTKKERQEQLRTTSWWLPQFQP--EGVKEVIVEPPKRPASPMSGEPLRPKDLIPVIFTIDSEKEKTAHLSGGEGNRGSIICPITRKGIISQKAVLIKRTGHVMLEDAAKRFALPTMTCPVTGEAEVVMCHVMRVLHGS 838
DSQQ FG+C L + PA +P+ATPSGH+Y +E IV +LL KTQ+ ++ A+E ++ T ++ R K T+E ++QL + E K K A+ A +V TQI L++++ L+ TS+WL + QP + + + PPKRPASPMSGEPLR KDL P+ D + G C ++ K + +Q V I ++G VML+ A PTMTCP+TG+ + HV+ + GS
Sbjct: 36 DSQQKFGYCCLGLQPAADPVATPSGHIYNREAIVSYLLTKTQDYKKALAAYEGRQ--------TQRSAKRQKLTKE--KEEEQLA-------------QFERKNK-------------GASQLSDATHSQALVA--TTQIN-LESRETATATLKRTSYWLSEMQPAQQDILDTDELPPKRPASPMSGEPLRIKDLTPLDLRTD--------------DAGGFTCAVSDKSLTTQPVVAITKSGQVMLKSVFDELARPTMTCPITGK-KFKEKHVLTLQKGS 262
BLAST of mRNA_P-lacustris_contig1065.593.1 vs. uniprot
Match: A0A7S0KBE0_9STRA (Hypothetical protein n=2 Tax=Leptocylindrus aporus TaxID=1398097 RepID=A0A7S0KBE0_9STRA) HSP 1 Score: 117 bits (294), Expect = 4.980e-27 Identity = 85/267 (31.84%), Postives = 131/267 (49.06%), Query Frame = 2
Query: 2 DSQQIFGHCALCIHPAVEPMATPSGHLYCKECIVEFLLAKTQELRRQREAFE---AQEKSKAMDEVTADASSRVKATREFVSTQQQLVLSKPQASESTGSDKHEGKGKKRAREEQAGFGADAATSAGKAGKEDEVVQKELTQIAVLKTKKERQEQLRTTSWWLPQFQPEGVKEVIVEPPKRPASPMSGEPLRPKDLIPVIFTIDSEKEKTAHLSGGEGNRGSIICPITRKGIISQKAVLIKRTGHVMLEDAAKRFALPTMTCPVTGE 793
D+QQ FGHC L + A +P+AT SGH+Y +E IV +LL K QE++ QR A+E A+E+ K M+E A+ RV + FV+ + + D+H ++K+L + +++ ++ L+ +S+WL Q P+ V+E + PP RP SPMSG PLR KDLI + +D + + C ++ K + +Q+ V I T V+L+D ALPT CPVTG+
Sbjct: 35 DAQQKFGHCCLTLQLAKDPVATASGHIYSREAIVSYLLTKNQEIKEQRAAYEKQLAEEERKKMNERDRTAADRVTS---FVNRNEGAIQ--------VSRDRH-----------------------------GSTLEKQLAKKIDVESNDSKKTCLKRSSYWLSQNAPDHVEEKLSAPPDRPPSPMSGRPLRLKDLISLDCKVDEDGR-------------NFQCAVSGKTLSTQEVVAITNTKQVILKDVFDSLALPTKICPVTGQ 248
BLAST of mRNA_P-lacustris_contig1065.593.1 vs. uniprot
Match: K8YSP8_NANGC (Nitric oxide synthase interacting protein (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YSP8_NANGC) HSP 1 Score: 115 bits (287), Expect = 1.990e-26 Identity = 80/238 (33.61%), Postives = 123/238 (51.68%), Query Frame = 2
Query: 2 DSQQIFGHCALCIHPAVEPMATPSGHLYCKECIVEFLLAKTQELRRQREAFEAQEKSKAMDEVTADASSRVKATREFVSTQQQLVLSKPQASESTGSDKHEGKGKKRAREEQAGFGADAATSAGKAGKEDEVVQKELTQIAVLKTKKERQEQLRTTSWWLPQFQPEGVKEVIVEPPKRPASPMSGEPLRPKDLIPVIFTIDSEKEKTAHLSGGEGNRGSIICPITRKGIISQKAVLIK 715
DSQQ FG+C L + P +P+ +PSGH+Y +E IVE+LL+KTQ+L+RQR +E Q + + A + K FV Q +A+ G KHE ++ R+ ++++L+++ + + K +QE ++ TS+W+P PE I +P RP SPM+G+PLR KDL+P+ +D E RG +C ++RK I SQ AV IK
Sbjct: 35 DSQQPFGYCCLTLKPVTDPVVSPSGHIYSREAIVEYLLSKTQDLKRQRVLYEQQREEEQERMEAALNEEKEKDVHRFVERQTSTF---EEAAPRQG--KHEQNPQEENRQR--------------------YIKQQLSKV-IHRDLKTKQEDVKKTSFWVPVCTPEAKNTAIEKPATRPRSPMTGDPLRAKDLLPLPLMVDPEWRNE------HDGRGKFLCAVSRKAITSQPAVFIK 240 The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig1065.593.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-lacustris_contig1065.593.1 >prot_P-lacustris_contig1065.593.1 ID=prot_P-lacustris_contig1065.593.1|Name=mRNA_P-lacustris_contig1065.593.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=285bp MATPSGHLYCKECIVEFLLAKTQELRRQREAFEAQEKSKAMDEVTADASSback to top mRNA from alignment at P-lacustris_contig1065:62163..67391- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-lacustris_contig1065.593.1 ID=mRNA_P-lacustris_contig1065.593.1|Name=mRNA_P-lacustris_contig1065.593.1|organism=Pleurocladia lacustris SAG_25_93|type=mRNA|length=5229bp|location=Sequence derived from alignment at P-lacustris_contig1065:62163..67391- (Pleurocladia lacustris SAG_25_93)back to top Coding sequence (CDS) from alignment at P-lacustris_contig1065:62163..67391- >mRNA_P-lacustris_contig1065.593.1 ID=mRNA_P-lacustris_contig1065.593.1|Name=mRNA_P-lacustris_contig1065.593.1|organism=Pleurocladia lacustris SAG_25_93|type=CDS|length=1710bp|location=Sequence derived from alignment at P-lacustris_contig1065:62163..67391- (Pleurocladia lacustris SAG_25_93)back to top |