mRNA_P-lacustris_contig1056.520.1 (mRNA) Pleurocladia lacustris SAG_25_93

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-lacustris_contig1056.520.1
Unique NamemRNA_P-lacustris_contig1056.520.1
TypemRNA
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Homology
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BLAST of mRNA_P-lacustris_contig1056.520.1 vs. uniprot
Match: D8LFT1_ECTSI (Cation efflux family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFT1_ECTSI)

HSP 1 Score: 243 bits (619), Expect = 1.870e-64
Identity = 155/263 (58.94%), Postives = 185/263 (70.34%), Query Frame = 3 
Query: 1674 CKEHGHGGKSMNLTAVLVHAITDAISSAVVCAQGIMAFSFGKPTTVDWTDYLDPLTSIFLSLFMVYCALPVVKDCWHVLLEGTPRSTDLPRLKKELLKVQGISSIQSLSVTQLNSEEPFVASLTLVA--EAGTINSTPRCQGVENSG---GEKQKGELLVAGTVAVVESVRRVLAGHNIGRNTVEIVLRPGDAARGTGVEGAGYGASESGDRDRGKFSSAADE---GEEFERKHLVEGSSSGNSGGKSNGGHHRHSNEKCSGH 2438
            CK HG   +SMNL AVLVHAI DA+SS VVCAQG++AFSFG+ + VDWTDYLDPLTSI LS+F+VYCALPVVK+C HVLLEGTPRS DLPRL+KELLKV GIS+IQSLSVTQLNSEEPFVA++T+VA  E G   ST   +G+ N G    + ++G     G   +VE+V+ VL  HNIGRNTVE+VLR GD A   G  GA  GA  +G+ + G+ SS  +    G E ER     GSS   S G     H RHS+ +CSGH
Sbjct:  437 CKGHG---QSMNLMAVLVHAIADAVSSGVVCAQGVVAFSFGR-SGVDWTDYLDPLTSIALSVFIVYCALPVVKECAHVLLEGTPRSADLPRLRKELLKVPGISTIQSLSVTQLNSEEPFVAAVTVVADPEVGGA-STTAAEGLGNGGVGAAQTRRG-----GATGLVEAVKLVLGSHNIGRNTVEVVLRHGDDAARRG--GATEGAPPNGNWETGRQSSGVESDGGGHEAERG---AGSSCNGSAGLE---HDRHSHGQCSGH 681
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BLAST of mRNA_P-lacustris_contig1056.520.1 vs. uniprot
Match: A0A6H5JZB7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZB7_9PHAE)

HSP 1 Score: 223 bits (567), Expect = 9.200e-60
Identity = 127/193 (65.80%), Postives = 148/193 (76.68%), Query Frame = 3 
Query: 1701 SMNLTAVLVHAITDAISSAVVCAQGIMAFSFGKPTTVDWTDYLDPLTSIFLSLFMVYCALPVVKDCWHVLLEGTPRSTDLPRLKKELLKVQGISSIQSLSVTQLNSEEPFVASLTLVA--EAGTINSTPRCQGVENSG---GEKQKGELLVAGTVAVVESVRRVLAGHNIGRNTVEIVLRP-GDAARGTGVEG 2261
            SMNL AVLVHAI DA+SS VVCAQG++AF FG+ + VDWTDYLDPLTSI LS+F+VYCALPVVK+C HVLLEGTPRS DLPRL+KELLKV GIS IQSLSVTQLNSEEPFVA++T+VA  E G   ST   + + N G    + ++G     G   +VE+V+ VL  HNIGRNTVE+VLR   DAARG   EG
Sbjct:  210 SMNLMAVLVHAIADAVSSGVVCAQGVVAFIFGR-SGVDWTDYLDPLTSIALSVFIVYCALPVVKECAHVLLEGTPRSADLPRLRKELLKVPGISKIQSLSVTQLNSEEPFVAAVTIVADPEVGGA-STKSAERLGNGGVGAAQTRRG-----GATGLVEAVKLVLGSHNIGRNTVEVVLRHRDDAARGGATEG 395
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BLAST of mRNA_P-lacustris_contig1056.520.1 vs. uniprot
Match: A0A7S3XPH5_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XPH5_HETAK)

HSP 1 Score: 88.6 bits (218), Expect = 4.510e-15
Identity = 61/176 (34.66%), Postives = 89/176 (50.57%), Query Frame = 3 
Query: 1692 GGKSMNLTAVLVHAITDAISSAVVCAQGIMAFSFGKPTTVDWTDYLDPLTSIFLSLFMVYCALPVVKDCWHVLLEGTPRS-TDLPRLKKELLKVQGISSIQSLSVTQLNSEEPFVASLTLVAEAGTINSTPRCQGVENSGGEKQKGELLVAGTVAVVESVRRVLAGHNIGRNTVEI 2216
            GG S N+ AV +HA+ DA+SS VV   G +A   G+P  +D+TDYLD +TS+ ++L       PV++   HVLLEG PR      RL++ LL+V+G  S+  L V QL+      A                 QG  ++G   Q           V+   +R+L  H I ++TVE+
Sbjct:  180 GGDS-NIRAVFIHALMDALSSLVVMIIGFIARYAGRPGQLDFTDYLDAITSVVMALMTALAVAPVLRGAAHVLLEGHPRHLVTKARLERALLRVEGARSVDRLWVLQLDGRACVAA----------------VQGSCDAGRHAQ-----------VLSEFKRILKVHGIEQSTVEL 327
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BLAST of mRNA_P-lacustris_contig1056.520.1 vs. uniprot
Match: A0A2G8SCW2_9APHY (Transporter n=1 Tax=Ganoderma sinense ZZ0214-1 TaxID=1077348 RepID=A0A2G8SCW2_9APHY)

HSP 1 Score: 80.9 bits (198), Expect = 5.470e-12
Identity = 42/124 (33.87%), Postives = 72/124 (58.06%), Query Frame = 3 
Query: 1683 HGHGGKSMNLTAVLVHAITDAISSAVVCAQGIMAFSFGKPTTVDWTDYLDPLTSIFLSLFMVYCALPVVKDCWHVLLEGTPRSTDLPRLKKELLKVQGISSIQSLSVTQLNSEEPFVASLTLVA 2054
            HGH   SMN+ A+++H + DA+ +  V + G++ +     TT+ W  Y DP+ S+ ++L +   ALP+V+    +LL+G P +  L   +  +L V G+ S+  L + QL SE   VAS+ ++A
Sbjct:  284 HGHSHGSMNMRALVLHVMGDALGNVGVISTGLVIWL----TTLSWKYYFDPIISLVITLIIFSSALPLVRSTAFILLQGVPATVSLEETRDAILAVDGVLSVHELHIWQL-SENKLVASVHVMA 402
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BLAST of mRNA_P-lacustris_contig1056.520.1 vs. uniprot
Match: UPI0019037264 (cation efflux protein n=1 Tax=Cantharellus anzutake TaxID=1750568 RepID=UPI0019037264)

HSP 1 Score: 78.6 bits (192), Expect = 8.550e-12
Identity = 53/178 (29.78%), Postives = 91/178 (51.12%), Query Frame = 3 
Query: 1680 EHGHGGKSMNLTAVLVHAITDAISSAVVCAQGIMAFSFGKPTTVDWTDYLDPLTSIFLSLFMVYCALPVVKDCWHVLLEGTPRSTDLPRLKKELLKVQGISSIQSLSVTQLNSEEPFVASLTLVAEAGTINSTPRCQGVENSGGEKQKGELLVAGTVAVVESVRRVLAGHNIGRNTVE 2213
            +HGH   SMN+ AVL+H + DA+ +  V + G++ +     TT  W  Y DP+ S+ ++  +   ALP+VK    +LL+  PRS  L  ++ ++  + G+ S+  L V +L SE   VAS+ +               V + G E  +  + VAG       +R+VL G+ +  +T++
Sbjct:  146 DHGHA-HSMNMHAVLLHVLGDALGNVGVISSGLIIWL----TTWSWKYYSDPIISLVITCIIFRSALPLVKRASFILLQAVPRSISLDAVRSDIEAISGVLSLHELHVWEL-SENKIVASVHVC--------------VAHEGEEGSRAFMEVAG------DIRKVLHGYEVHSSTIQ 297
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BLAST of mRNA_P-lacustris_contig1056.520.1 vs. uniprot
Match: A0A2H3IUW9_WOLCO (Cation efflux protein n=1 Tax=Wolfiporia cocos (strain MD-104) TaxID=742152 RepID=A0A2H3IUW9_WOLCO)

HSP 1 Score: 80.1 bits (196), Expect = 9.550e-12
Identity = 43/120 (35.83%), Postives = 70/120 (58.33%), Query Frame = 3 
Query: 1683 HGHGGKSMNLTAVLVHAITDAISSAVVCAQGIMAFSFGKPTTVDWTDYLDPLTSIFLSLFMVYCALPVVKDCWHVLLEGTPRSTDLPRLKKELLKVQGISSIQSLSVTQLNSEEPFVASL 2042
            HGH   SMN+ A+L+H + DA+ +  V A G++ +     +T  W  Y DP+ S+ +++ +   ALP+VK    +LL+G P +  +  +KK +L  +G+ S+  L V QL SE   VAS+
Sbjct:  286 HGHSHGSMNMRALLLHVLGDALGNVGVIATGLVIWR----STWSWKYYFDPIISLVITVIIFSSALPLVKSTSTILLQGAPSTVSIEDVKKAILDCKGVISLHELHVWQL-SETKIVASV 400
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BLAST of mRNA_P-lacustris_contig1056.520.1 vs. uniprot
Match: A0A5K1JS61_9APHY (N/A n=1 Tax=Ganoderma boninense TaxID=34458 RepID=A0A5K1JS61_9APHY)

HSP 1 Score: 79.7 bits (195), Expect = 1.340e-11
Identity = 41/124 (33.06%), Postives = 72/124 (58.06%), Query Frame = 3 
Query: 1683 HGHGGKSMNLTAVLVHAITDAISSAVVCAQGIMAFSFGKPTTVDWTDYLDPLTSIFLSLFMVYCALPVVKDCWHVLLEGTPRSTDLPRLKKELLKVQGISSIQSLSVTQLNSEEPFVASLTLVA 2054
            HGH   SMN+ A+++H + DA+ +  V + G++ +     TT+ W  Y DP+ S+ +++ +   ALP+V+    +LL+G P +  L   +  +L V G+ S+  L + QL SE   VAS+ ++A
Sbjct:  286 HGHSHGSMNMRALVLHVMGDALGNVGVISTGLVIWL----TTLSWKYYFDPIISLVITVIIFSSALPLVRSTAFILLQGVPATVSLEETRDAILAVDGVLSVHELHIWQL-SENKLVASVHVMA 404
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BLAST of mRNA_P-lacustris_contig1056.520.1 vs. uniprot
Match: A8N1K9_COPC7 (Zinc/cadmium resistance protein n=1 Tax=Coprinopsis cinerea (strain Okayama-7 / 130 / ATCC MYA-4618 / FGSC 9003) TaxID=240176 RepID=A8N1K9_COPC7)

HSP 1 Score: 79.3 bits (194), Expect = 1.620e-11
Identity = 43/128 (33.59%), Postives = 73/128 (57.03%), Query Frame = 3 
Query: 1671 RCKEHGHGGKSMNLTAVLVHAITDAISSAVVCAQGIMAFSFGKPTTVDWTDYLDPLTSIFLSLFMVYCALPVVKDCWHVLLEGTPRSTDLPRLKKELLKVQGISSIQSLSVTQLNSEEPFVASLTLVA 2054
            R + H HG  SMN+ A+++H I DA+ +  V A G++ +     T   W  Y DP+ S+ +++ +   ++P+V+    +LL+G P +  L  +K  +L V G+ S+  L V QL SE   VAS+ ++A
Sbjct:  282 RKRSHAHGHGSMNMRALVLHVIGDALGNVGVIATGLVIWL----TDWSWKYYFDPVISLVITVIIFSSSMPLVRSASFILLQGVPPTVSLDEVKDAILAVDGVISLHELHVWQL-SENKLVASVHVLA 404
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BLAST of mRNA_P-lacustris_contig1056.520.1 vs. uniprot
Match: A0A0C3BNI1_9AGAM (Uncharacterized protein n=1 Tax=Serendipita vermifera MAFF 305830 TaxID=933852 RepID=A0A0C3BNI1_9AGAM)

HSP 1 Score: 78.6 bits (192), Expect = 1.900e-11
Identity = 43/122 (35.25%), Postives = 71/122 (58.20%), Query Frame = 3 
Query: 1677 KEHGHGGKSMNLTAVLVHAITDAISSAVVCAQGIMAFSFGKPTTVDWTDYLDPLTSIFLSLFMVYCALPVVKDCWHVLLEGTPRSTDLPRLKKELLKVQGISSIQSLSVTQLNSEEPFVASL 2042
            KE  H   SMN+ A+L+H + DA+ +  V + G++ +     TT  W  Y DP+ S+F+++ +   ALP+VK   ++LL+G P    L  L+ ++  V+G+ S+  L V QL SE   +AS+
Sbjct:  214 KEGHHHHGSMNMRALLLHVLGDALGNVGVISSGLIIWQ----TTWKWRYYSDPVISLFITMIIFSSALPLVKSASYILLQGVPEDIKLDDLRVDIGNVEGVVSVHELHVWQL-SETKHIASV 330
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BLAST of mRNA_P-lacustris_contig1056.520.1 vs. uniprot
Match: A0A0C2YEF8_HEBCY (Uncharacterized protein (Fragment) n=1 Tax=Hebeloma cylindrosporum h7 TaxID=686832 RepID=A0A0C2YEF8_HEBCY)

HSP 1 Score: 78.2 bits (191), Expect = 3.790e-11
Identity = 41/124 (33.06%), Postives = 72/124 (58.06%), Query Frame = 3 
Query: 1683 HGHGGKSMNLTAVLVHAITDAISSAVVCAQGIMAFSFGKPTTVDWTDYLDPLTSIFLSLFMVYCALPVVKDCWHVLLEGTPRSTDLPRLKKELLKVQGISSIQSLSVTQLNSEEPFVASLTLVA 2054
            HGH   SMN+ A+++H + DA+ +  V A G++ +     T   +  Y DP+ S+ +++ +   ALP+V+    +LL+G P +  L  +K  +L ++G+ S+  L V QL SE   VAS+ ++A
Sbjct:  277 HGHSHGSMNMRALVLHVLGDALGNVGVIATGLIIWQ----TAWKYKYYCDPVISLVITIIIFSSALPLVRSASFILLQGVPSTVSLDEVKDSILNIEGVLSVHELHVWQL-SENKLVASVHVLA 395
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig1056.520.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LFT1_ECTSI1.870e-6458.94Cation efflux family protein n=1 Tax=Ectocarpus si... [more]
A0A6H5JZB7_9PHAE9.200e-6065.80Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S3XPH5_HETAK4.510e-1534.66Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
A0A2G8SCW2_9APHY5.470e-1233.87Transporter n=1 Tax=Ganoderma sinense ZZ0214-1 Tax... [more]
UPI00190372648.550e-1229.78cation efflux protein n=1 Tax=Cantharellus anzutak... [more]
A0A2H3IUW9_WOLCO9.550e-1235.83Cation efflux protein n=1 Tax=Wolfiporia cocos (st... [more]
A0A5K1JS61_9APHY1.340e-1133.06N/A n=1 Tax=Ganoderma boninense TaxID=34458 RepID=... [more]
A8N1K9_COPC71.620e-1133.59Zinc/cadmium resistance protein n=1 Tax=Coprinopsi... [more]
A0A0C3BNI1_9AGAM1.900e-1135.25Uncharacterized protein n=1 Tax=Serendipita vermif... [more]
A0A0C2YEF8_HEBCY3.790e-1133.06Uncharacterized protein (Fragment) n=1 Tax=Hebelom... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig1056contigP-lacustris_contig1056:53992..58731 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score244.2
Seed ortholog evalue1.1e-61
Seed eggNOG ortholog2880.D8LFT1
Preferred nameZRC1
KEGG koko:K14688,ko:K14692
KEGG TC2.A.4.2,2.A.4.4.3,2.A.4.4.5
KEGG Pathwayko04978,map04978
Hectar predicted targeting categoryother localisation
GOsGO:0000041,GO:0000322,GO:0000323,GO:0000324,GO:0000329,GO:0003674,GO:0005215,GO:0005385,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005773,GO:0005774,GO:0005783,GO:0005789,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0006824,GO:0006829,GO:0006873,GO:0006875,GO:0006877,GO:0006882,GO:0006950,GO:0008150,GO:0008324,GO:0009636,GO:0009966,GO:0009967,GO:0009987,GO:0010035,GO:0010038,GO:0010043,GO:0010646,GO:0010647,GO:0012505,GO:0015075,GO:0015087,GO:0015318,GO:0016020,GO:0016021,GO:0016323,GO:0019725,GO:0019899,GO:0019900,GO:0019901,GO:0022857,GO:0022890,GO:0023051,GO:0023056,GO:0030001,GO:0030003,GO:0031090,GO:0031224,GO:0031984,GO:0032879,GO:0034220,GO:0040026,GO:0040028,GO:0042175,GO:0042221,GO:0042592,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044437,GO:0044444,GO:0044446,GO:0044459,GO:0044464,GO:0046578,GO:0046579,GO:0046686,GO:0046873,GO:0046915,GO:0046916,GO:0048518,GO:0048522,GO:0048580,GO:0048582,GO:0048583,GO:0048584,GO:0048878,GO:0050789,GO:0050793,GO:0050794,GO:0050801,GO:0050896,GO:0051056,GO:0051057,GO:0051094,GO:0051179,GO:0051234,GO:0051239,GO:0051240,GO:0051716,GO:0055065,GO:0055068,GO:0055069,GO:0055076,GO:0055080,GO:0055082,GO:0055085,GO:0061062,GO:0061063,GO:0061088,GO:0061687,GO:0065007,GO:0065008,GO:0070838,GO:0070887,GO:0071241,GO:0071248,GO:0071276,GO:0071294,GO:0071577,GO:0071585,GO:0071944,GO:0072503,GO:0072507,GO:0072509,GO:0072511,GO:0097237,GO:0097501,GO:0098588,GO:0098590,GO:0098655,GO:0098660,GO:0098662,GO:0098754,GO:0098771,GO:0098805,GO:0098827,GO:0098849,GO:0098852,GO:1902531,GO:1902533,GO:1990170,GO:1990748,GO:2000026
EggNOG free text desc.regulation of zinc ion transport
EggNOG OGsCOG1230@1,KOG1483@2759
COG Functional cat.P
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko02000
Exons4
Model size3476
Cds size1278
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig1056.520.1prot_P-lacustris_contig1056.520.1Pleurocladia lacustris SAG_25_93polypeptideP-lacustris_contig1056 55194..57735 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815326.1793303-UTR-P-lacustris_contig1056:53991..551931622815326.1793303-UTR-P-lacustris_contig1056:53991..55193Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig1056 53992..55193 +
1693493477.8879368-UTR-P-lacustris_contig1056:53991..551931693493477.8879368-UTR-P-lacustris_contig1056:53991..55193Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig1056 53992..55193 +
1622815326.2458713-UTR-P-lacustris_contig1056:57735..587311622815326.2458713-UTR-P-lacustris_contig1056:57735..58731Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig1056 57736..58731 +
1693493477.9408062-UTR-P-lacustris_contig1056:57735..587311693493477.9408062-UTR-P-lacustris_contig1056:57735..58731Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig1056 57736..58731 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815326.1915288-CDS-P-lacustris_contig1056:55193..557641622815326.1915288-CDS-P-lacustris_contig1056:55193..55764Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1056 55194..55764 +
1693493477.9011133-CDS-P-lacustris_contig1056:55193..557641693493477.9011133-CDS-P-lacustris_contig1056:55193..55764Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1056 55194..55764 +
1622815326.2017515-CDS-P-lacustris_contig1056:56308..564271622815326.2017515-CDS-P-lacustris_contig1056:56308..56427Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1056 56309..56427 +
1693493477.9144034-CDS-P-lacustris_contig1056:56308..564271693493477.9144034-CDS-P-lacustris_contig1056:56308..56427Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1056 56309..56427 +
1622815326.2185867-CDS-P-lacustris_contig1056:56747..568221622815326.2185867-CDS-P-lacustris_contig1056:56747..56822Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1056 56748..56822 +
1693493477.9249496-CDS-P-lacustris_contig1056:56747..568221693493477.9249496-CDS-P-lacustris_contig1056:56747..56822Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1056 56748..56822 +
1622815326.2336445-CDS-P-lacustris_contig1056:57222..577351622815326.2336445-CDS-P-lacustris_contig1056:57222..57735Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1056 57223..57735 +
1693493477.9327836-CDS-P-lacustris_contig1056:57222..577351693493477.9327836-CDS-P-lacustris_contig1056:57222..57735Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1056 57223..57735 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-lacustris_contig1056.520.1

>prot_P-lacustris_contig1056.520.1 ID=prot_P-lacustris_contig1056.520.1|Name=mRNA_P-lacustris_contig1056.520.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=426bp
MTWSSVMKRGLVGGVRESSGGGDTRHRHDKEGHACSHSHSHSHVEHSLLH
EQMHQVDCNANHNNLDDAGLPSQQCQSQGMDACCSNGSARNGIERSHDCG
NADNGHRRVAGAGGNGWVEITSVHKKYGAAAVGGSGDDDHGGGGSGCPPW
YGGGGGRCKEHGHGGKSMNLTAVLVHAITDAISSAVVCAQGIMAFSFGKP
TTVDWTDYLDPLTSIFLSLFMVYCALPVVKDCWHVLLEGTPRSTDLPRLK
KELLKVQGISSIQSLSVTQLNSEEPFVASLTLVAEAGTINSTPRCQGVEN
SGGEKQKGELLVAGTVAVVESVRRVLAGHNIGRNTVEIVLRPGDAARGTG
VEGAGYGASESGDRDRGKFSSAADEGEEFERKHLVEGSSSGNSGGKSNGG
HHRHSNEKCSGHGHSHAHVSTVDLV*
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mRNA from alignment at P-lacustris_contig1056:53992..58731+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-lacustris_contig1056.520.1 ID=mRNA_P-lacustris_contig1056.520.1|Name=mRNA_P-lacustris_contig1056.520.1|organism=Pleurocladia lacustris SAG_25_93|type=mRNA|length=4740bp|location=Sequence derived from alignment at P-lacustris_contig1056:53992..58731+ (Pleurocladia lacustris SAG_25_93)
CACAAATTTCATTTTTTGCTTCACATGGTTTTAGGGTGGAGATTTCACAG
ATTGTGCCGCCCAGGACGGAGATCGGCGATTCTCGATAATTCCCAAAAAA
TAATTCTCCGATCCGTGTCTGCGGAGGCACCGTCGAAAATGCCGGCGGCT
GGGGGGTCCCGTGGCGGAAAAAAAATTGCGGTCACAATTTCCCTTTTTCT
TTCACATGGTGCGGAGAATTCAGAGATTGTGCCCCCCAGGACGGAGACCG
GCGATTCTCGAAAAAAATAAAATGTTATTTCTGCGGTTTGTTTCTGCGGA
GGCACGGTCGCAAGGGCGGCGGCTGGGGGTCCCGTGACGCGAGAAAATCA
CGGGCACAAATTCCATTTTTTGCTTCGCTTGGTTTTTGTGTGGAGAATTC
AGATACTGAGCCCCAGGACAAAGATCGGCGACTCCCGAAAATTTCAATAA
CAAAGTTGTCCGGTTTGTGTCTGCGGAGGCACCGTTGGGAGTCCCGTGGC
GCAAGAAAATCGCGGTCACAAAAATCCATTAGCCAATTTGTTTTAGTCGT
CGCTGACACTGAAACCCCTAGAGGGCTTCAGAATCTGGTGCTCCACAAGC
TGTGGCTCCGGGCGGGATGCCATATGGTGTGCTCTCTGAACGATGATTTG
CCCTCTGTTCTCGTTCTGTCTGCTCACGTCCATTCAACGCATTGGCCGTG
GTCCGCGCCTCCTGGCGGCCTTGAAGCGCTGTTTAAACGCCTCACAACGG
CCTTCGCGTAGCGCATGACCTTGCGAAATGTCATCCGCTCATCTCTCCTT
GTCATTAAATGAAGTACATCCTGTACTGCTGCCGTGGGATCGGATCGGGG
GCAGCTCGAACTCTAGAAGGGACTCGAGCAGCCGGAAATTAAGGGTGCTG
CTCCGTTTGGCTTGGGCGCGTGTTTTCTGAAGTCTTGACTATACCACCCG
GTGAAAGGGCAGCAAGTAATCGAGTCTGCCCTCCGCTTCACCTGTCACCC
AGGCACGAGATACCCGCAACGCTCGGCTCAATTGACCTGCTTGCCCTTGT
GGACCCGGACGAGGTGCCGACGTCGGTGTCTCCCTCACAGTGCGCCGTCG
ACGACGACGAGGAAATTTCCATGGTGCTCACTGGCTCCGATCCCATCGGA
CGGGGGAGCCTAAGGGATACAGCTGTCGCGCGCCAGGCATTTATGGCCAG
GGATGACATGGAGTTCGGTGATGAAGAGGGGGTTGGTCGGGGGCGTGCGA
GAGAGCAGTGGCGGCGGTGATACCCGTCACCGTCATGACAAGGAAGGGCA
TGCCTGTTCGCATTCTCACTCCCACTCCCACGTGGAGCATTCGCTCCTTC
ACGAGCAAATGCACCAAGTGGATTGTAACGCGAATCACAACAACTTGGAC
GACGCCGGGTTACCGTCGCAGCAGTGTCAGTCGCAAGGGATGGACGCCTG
CTGCAGCAATGGTAGCGCGCGCAATGGGATCGAACGCTCCCACGACTGCG
GAAACGCGGACAACGGCCACAGGAGGGTAGCGGGCGCCGGCGGCAACGGT
TGGGTCGAGATTACGAGCGTCCACAAGAAATACGGTGCCGCGGCTGTCGG
CGGTAGTGGTGACGATGATCACGGCGGCGGCGGCAGTGGCTGCCCGCCCT
GGTACGGGGGTGGGGGTGGGAGATGCAAGGAACACGGCCACGGTGGCAAA
AGCATGAACCTGACGGCGGTGCTGGTGCACGCCATCACGGATGCTATTTC
ATCTGCGGTCGTGTGCGCTCAAGGTATGCTCCAATAGGTAGACGAGGGGG
TTGGAGTACGAGGAAGTTATTGAGTGCTTTGGGCGGATAACTCTCTATCT
GTGTGGATATCTTGTACCGGGTTTTACATCAACGAAGTCTCGAGATCGGC
CCACTCCCTGGAAATCCCTAACTCACTGCAGTTGAACGCTGTGTTTATAT
GTCCATGACAGAGAACTGCTGCTGTTTTACGACACTATAGGTTGACCTGG
CCTCACTCCTTGATGACACAGGGTCTCTCGGCATGTTGTCGCGGTTCTCG
TTTTGTGTATCTCTTTTGCTATGGGCCATACTTGTGTAAGTCAATGATTT
AGGGCCGTCCGTGGGACGAGCCTCTCTCATGCGTGAAGGCAACTACTCTC
CAGCGTTTCCTCGTCTGCCCCTCTACAATCTCGACAACATGCTTGGCCTA
TATGTCATCTTCAAACCTAAGCCGTGTATTTGTTTGTTTTTCGTGTCCTC
GTGTGTCTTAAGTCTTCGGAACTTTACCCCCTCGTCCCCGTCCCGTACCG
CGCCGCTCGACCGTCAGGTATAATGGCATTCAGCTTCGGCAAACCTACCA
CCGTGGACTGGACGGACTACCTGGATCCGCTGACGAGCATCTTCTTGTCG
CTGTTCATGGTGTACTGCGCTCTCCCCGTCGTCAAGGTATGACGAGGTAT
CACGTCGACATCGGGCAGTTGTTCAGACGACACGCGACGGTAGTCCCGTC
AACGGAGTAGCCCGTGCTGCTCCTTTCTCGACATCGGCGTCCTTAGTTTT
TCTCGACGCCGCGAGGGTTGGCACATAACACACCACAGTCCATGGTATTG
CAGCAAGTCTCACATCGAGGTCACGCCCTCGTCACCCGCACGCCTAGCTA
GGCTGCCGTTGCTGGCGGTCAATCCTTTCGAGAAGGGAAGCGTTTGGTTG
AGGCGCTTAACCCGATGTTATCGGCTTGTGCTCCGTTTATCGTGCTTTGC
TCTCAGGATTGTTGGCATGTTCTTCTCGAGGGCACGCCCCGGAGCACAGA
CCTGCCACGCCTGAAAAAGGAACTCCTCAAGGTGATGAAGCGACAGCTTG
GGGGTGCGCGCCAAGACTATTGTAGCAATGTGCTACACTCATGAGGCGTT
GGCACGCACGCTTGGTCGCATTCGAGGTTGCTTATAGGAAAGAGAGCTCT
GTTGGTGACACTTCTGGTAGTCTACCGCCGTTGCCACTGCGTCGCCACCG
CGGCTATGGCCTCTACCGACGTGTGCGCTCTTGGGCGGCGAGGTCACGTG
GGTTCCACATGCGATAGGTCGATCGGCTCTTCATTTTTTGGCGCGTTTGC
CCCGGTCAACGGCCCAGTGTGAAACCGGTGTCTCGCACAACTATTCACCT
CTGGCTGAACTATTCTTCGTCGCCAGCAGTCAACAACCGCCGAAGTGATG
TTCAGCTTCCCTCCGTCACCCTCGGCGACAGGTGCAGGGGATATCTTCCA
TCCAGAGCCTCAGCGTTACCCAGCTCAACAGCGAGGAACCCTTTGTCGCG
TCCCTTACCCTGGTGGCCGAAGCCGGCACCATCAACAGCACTCCACGATG
CCAAGGGGTGGAAAATAGCGGGGGCGAAAAGCAGAAGGGGGAACTTCTTG
TAGCAGGGACCGTGGCCGTGGTTGAATCCGTGAGGCGAGTTTTGGCCGGG
CACAACATCGGCCGGAACACGGTGGAGATAGTTCTACGGCCGGGAGACGC
GGCACGTGGCACGGGGGTCGAGGGGGCGGGGTACGGAGCTTCGGAGAGTG
GGGATCGGGATCGGGGGAAGTTTTCGTCGGCTGCCGATGAGGGCGAGGAG
TTTGAACGGAAACACCTCGTCGAGGGCAGTAGCAGCGGTAACAGTGGCGG
GAAGTCTAATGGTGGGCATCATAGGCATTCTAACGAGAAGTGTTCTGGGC
ACGGGCACTCGCACGCGCACGTCTCGACGGTTGATCTCGTGTAGACCCCC
GCCCCCGTCGGCTTTACATCTCGGCTTCAGGACTCGCCCGCAGGTGGCTT
CTTTGTTCTCAATTTTGTTCTCCGCGTTCAATAGATTTCGTGCAAAATTC
TAGACACTTGTGTCAACATGTGTGGGACCGTATTTTCCCGCATCGATTTT
TGTTGGTCAATCAACCGCCGCTGCATGCGGCGGAATGGTCTCGTCTCGTG
GTAGCGCTGTCCATCCACGCGTGTGTGTGAGAAGAGAGAGGGAGGGGGAG
AGAGAGCGCTAGAGGCCCCAGTCTTGTGACTCTTTGCCAAGCGGGTCGCA
GCATTGGTATTCGCTTGGCTTCGATGATCGGCCCCGACGTTGTCCGACAC
GGCAGCGACGAAACAGTAGGACTTGAGCAGCGACGAAGTATTCGAATGGT
ATGGCCGGAGCAGCGGCGTCGCCCCCTTACTGGTGTTCCTTGGAGTGTCA
AAACGTCGCTGCTCTGTTGACGCTCACGCTATTTGAGCTTGGGCAGTAGA
GGTGGCCCTATTATTCTGCATGTTCACCATCGAGGGAAAGGTAAACCTGC
TGCACTCCTGCCGTCCGCACGTACGTCCTGATGAGTCCTGTCAGTTCATT
GATATCTTCTATGCCTTCGGTGTCTTGCCGCGACGGTTTGCGGTGGGAGC
TGGAGATTATTTTCTAGGCGCACCCATTTTCTGCTACTGCATGCAGTAGA
GGAGGGTCCTCCACATGTTGGGGTGGGAAGGGACTGGGGTTTCGCGGCTA
TGTTCTGTTCTTTTTCCAACCTCCTCGTAGAGTTTCTACTGATTGCTGTG
TTGCTTTGTACTTACTTGAGAGATTCATGTACCATGATCAATCGTGTTCT
GAGAATGTGGAATGGTTCAGTATTCCGTTGTTTGGTTTGCCAGGGAAGCT
GAACGGTTTCAATTTACCGCACGGGCAAGTATTAGAGCGAACGCCCTCAG
CGGAGTATTGGTACCTGTCACTTCTATAGTTGAATCATCA
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Coding sequence (CDS) from alignment at P-lacustris_contig1056:53992..58731+

>mRNA_P-lacustris_contig1056.520.1 ID=mRNA_P-lacustris_contig1056.520.1|Name=mRNA_P-lacustris_contig1056.520.1|organism=Pleurocladia lacustris SAG_25_93|type=CDS|length=2556bp|location=Sequence derived from alignment at P-lacustris_contig1056:53992..58731+ (Pleurocladia lacustris SAG_25_93)
ATGACATGGAGTTCGGTGATGAAGAGGGGGTTGGTCGGGGGCGTGCGAGA
GAGCAGTGGCGGCGGTGATACCCGTCACCGTCATGACAAGGAAGGGCATG
CCTGTTCGCATTCTCACTCCCACTCCCACGTGGAGCATTCGCTCCTTCAC
GAGCAAATGCACCAAGTGGATTGTAACGCGAATCACAACAACTTGGACGA
CGCCGGGTTACCGTCGCAGCAGTGTCAGTCGCAAGGGATGGACGCCTGCT
GCAGCAATGGTAGCGCGCGCAATGGGATCGAACGCTCCCACGACTGCGGA
AACGCGGACAACGGCCACAGGAGGGTAGCGGGCGCCGGCGGCAACGGTTG
GGTCGAGATTACGAGCGTCCACAAGAAATACGGTGCCGCGGCTGTCGGCG
GTAGTGGTGACGATGATCACGGCGGCGGCGGCAGTGGCTGCCCGCCCTGG
TACGGGGGTGGGGGTGGGAGATGCAAGGAACACGGCCACGGTGGCAAAAG
CATGAACCTGACGGCGGTGCTGGTGCACGCCATCACGGATGCTATTTCAT
CTGCGGTCGTGTGCGCTCAAGATGACATGGAGTTCGGTGATGAAGAGGGG
GTTGGTCGGGGGCGTGCGAGAGAGCAGTGGCGGCGGTGATACCCGTCACC
GTCATGACAAGGAAGGGCATGCCTGTTCGCATTCTCACTCCCACTCCCAC
GTGGAGCATTCGCTCCTTCACGAGCAAATGCACCAAGTGGATTGTAACGC
GAATCACAACAACTTGGACGACGCCGGGTTACCGTCGCAGCAGTGTCAGT
CGCAAGGGATGGACGCCTGCTGCAGCAATGGTAGCGCGCGCAATGGGATC
GAACGCTCCCACGACTGCGGAAACGCGGACAACGGCCACAGGAGGGTAGC
GGGCGCCGGCGGCAACGGTTGGGTCGAGATTACGAGCGTCCACAAGAAAT
ACGGTGCCGCGGCTGTCGGCGGTAGTGGTGACGATGATCACGGCGGCGGC
GGCAGTGGCTGCCCGCCCTGGTACGGGGGTGGGGGTGGGAGATGCAAGGA
ACACGGCCACGGTGGCAAAAGCATGAACCTGACGGCGGTGCTGGTGCACG
CCATCACGGATGCTATTTCATCTGCGGTCGTGTGCGCTCAAGGTATAATG
GCATTCAGCTTCGGCAAACCTACCACCGTGGACTGGACGGACTACCTGGA
TCCGCTGACGAGCATCTTCTTGTCGCTGTTCATGGTGTACTGCGCTCTCC
CCGTCGTCAAGGTATAATGGCATTCAGCTTCGGCAAACCTACCACCGTGG
ACTGGACGGACTACCTGGATCCGCTGACGAGCATCTTCTTGTCGCTGTTC
ATGGTGTACTGCGCTCTCCCCGTCGTCAAGGATTGTTGGCATGTTCTTCT
CGAGGGCACGCCCCGGAGCACAGACCTGCCACGCCTGAAAAAGGAACTCC
TCAAGGATTGTTGGCATGTTCTTCTCGAGGGCACGCCCCGGAGCACAGAC
CTGCCACGCCTGAAAAAGGAACTCCTCAAGGTGCAGGGGATATCTTCCAT
CCAGAGCCTCAGCGTTACCCAGCTCAACAGCGAGGAACCCTTTGTCGCGT
CCCTTACCCTGGTGGCCGAAGCCGGCACCATCAACAGCACTCCACGATGC
CAAGGGGTGGAAAATAGCGGGGGCGAAAAGCAGAAGGGGGAACTTCTTGT
AGCAGGGACCGTGGCCGTGGTTGAATCCGTGAGGCGAGTTTTGGCCGGGC
ACAACATCGGCCGGAACACGGTGGAGATAGTTCTACGGCCGGGAGACGCG
GCACGTGGCACGGGGGTCGAGGGGGCGGGGTACGGAGCTTCGGAGAGTGG
GGATCGGGATCGGGGGAAGTTTTCGTCGGCTGCCGATGAGGGCGAGGAGT
TTGAACGGAAACACCTCGTCGAGGGCAGTAGCAGCGGTAACAGTGGCGGG
AAGTCTAATGGTGGGCATCATAGGCATTCTAACGAGAAGTGTTCTGGGCA
CGGGCACTCGCACGCGCACGTCTCGACGGTTGATCTCGTGTAGGTGCAGG
GGATATCTTCCATCCAGAGCCTCAGCGTTACCCAGCTCAACAGCGAGGAA
CCCTTTGTCGCGTCCCTTACCCTGGTGGCCGAAGCCGGCACCATCAACAG
CACTCCACGATGCCAAGGGGTGGAAAATAGCGGGGGCGAAAAGCAGAAGG
GGGAACTTCTTGTAGCAGGGACCGTGGCCGTGGTTGAATCCGTGAGGCGA
GTTTTGGCCGGGCACAACATCGGCCGGAACACGGTGGAGATAGTTCTACG
GCCGGGAGACGCGGCACGTGGCACGGGGGTCGAGGGGGCGGGGTACGGAG
CTTCGGAGAGTGGGGATCGGGATCGGGGGAAGTTTTCGTCGGCTGCCGAT
GAGGGCGAGGAGTTTGAACGGAAACACCTCGTCGAGGGCAGTAGCAGCGG
TAACAGTGGCGGGAAGTCTAATGGTGGGCATCATAGGCATTCTAACGAGA
AGTGTTCTGGGCACGGGCACTCGCACGCGCACGTCTCGACGGTTGATCTC
GTGTAG
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