mRNA_P-lacustris_contig1051.491.1 (mRNA) Pleurocladia lacustris SAG_25_93
|
Overview
Homology
BLAST of mRNA_P-lacustris_contig1051.491.1 vs. uniprot
Match: A0A6H5K558_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K558_9PHAE) HSP 1 Score: 481 bits (1237), Expect = 3.670e-157 Identity = 248/466 (53.22%), Postives = 317/466 (68.03%), Query Frame = 1
Query: 1 LRLILTGTAGTGETVAIREMVRRIGESRFLLLAPTGNAACAIGGQTLHRGLSIPLASRARRASADPSDLSPTILQDLQRRLREVDFILVDEFSMIPQALLVLMIIRGKQAGS--------------FGGLNLILVGDPQQLPSVGVASVWNPDPQNGGHSVEGYHVWTHLTAAVELTEVRRQEGDDQAVFRQVLSRVAEGCVRQEDWQVLLPAMRSGRTVKEKSTVDDAVHIYPTNAQADFWNWEQLQSLRTPIARIDAEHTVSGFTSASTERFRGRAPALFLAVGARVFINNNLWTAAGLANGAVGHVLHMHWADGRRPPQLPDVVFVRLEHFRGEQQYFTEMDVNIGGSSVSLRNTVPIVPIEATDENPPAANRRGNRAPGETFPARCVRRQLPLTLAFGITIHKSQGQSMTRAVIDIGRAERPDGLSFTALSRVRSLGGLLLDDVDCDRLLAINNSSSFELRL 1356
LRL+LTGTAGTG+TV IREMVR +G+ RF+L+APTGNAACAIGG T+H G IP+ R S+DPS ++ L+DLQ R+ EVDFILVDEFSM+ Q +L LM RGKQA FGGL++ILVGDP QLP VG + +W +P GG S++G W + AVELT+V RQ+G +QA FR L R+AEG +DW VL + E+ T DDAVHI+PTNA AD WNW +L SL TPIARI+A HT+ G+ + S+ERFRG +FLA+GARVF+NNN+W +AGLANGAVG V+HM WA+G+ PPQLP+VV+VR+E++RG Q + + + + L N PI P++ D+ PP RRG+ T ARC R QLPL LAFGITI+KSQG ++ R +DIG +ER DG SFTA SR R+L +LL+ +R L I +S SF+ RL
Sbjct: 362 LRLLLTGTAGTGKTVVIREMVRLVGQQRFILMAPTGNAACAIGGMTIHGGFRIPVVQSNR--SSDPSRMTEAALRDLQERMAEVDFILVDEFSMVGQDMLGLMSARGKQAVEGRRGDGIEDFRQDVFGGLSIILVGDPAQLPPVGASPLWKHNPSTGGLSMQGLQAWLSMNNAVELTQVMRQQGPEQAAFRDTLLRIAEGMQTADDWDVLKRRFIAAVGAAERETFDDAVHIFPTNALADDWNWRRLNSLGTPIARINATHTIHGYNAVSSERFRGLQSHIFLAIGARVFVNNNVWVSAGLANGAVGEVVHMQWAEGQTPPQLPEVVWVRVENYRGPQYFEQPLRRDWADGEIDLTNLCPIAPMDVMDDQPPTGRRRGDG----TSIARCFRMQLPLMLAFGITIYKSQGNTLLRCFLDIGASERSDGQSFTAFSRCRTLENMLLEPFSLERFLKIGDSRSFQSRL 821
BLAST of mRNA_P-lacustris_contig1051.491.1 vs. uniprot
Match: A0A6H5K692_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K692_9PHAE) HSP 1 Score: 438 bits (1126), Expect = 5.100e-136 Identity = 229/455 (50.33%), Postives = 305/455 (67.03%), Query Frame = 1
Query: 37 ETVAIREMVRRIGESRFLLLAPTGNAACAIGGQTLHRGLSIPLASRARRASADPSDLSPTILQDLQRRLREVDFILVDEFSMIPQALLVLMIIRGKQA--------------GSFGGLNLILVGDPQQLPSVGVASVWNPDPQNGGHSVEGYHVWTHLTAAVELTEVRRQEGDDQAVFRQVLSRVAEGCVRQEDWQVLLPAMRSGRTVKEKSTVDDAVHIYPTNAQADFWNWEQLQSLRTPIARIDAEHTVSGFTSASTERFRGRAPALFLAVGARVFINNNLWTAAGLANGAVGHVLHMHWADGRRPPQLPDVVFVRLEHFRGEQQYFTEMDVNIGGSSVSLRNTVPIVPIEATDENPPAANRRGNRAPGETFPARCVRRQLPLTLAFGITIHKSQGQSMTRAVIDIGRAERPDGLSFTALSRVRSLGGLLLDDVDC-DRLLAINNSSSFELRL 1356
+ +A+REMVR++G RFLLLAPTGNAACAIGG+T+H GL + + +R R D ++S + +DLQ++++ VDF+LVDEFSMI Q +L +M +R KQA G FGGL +I+VGD QL +V + +W PQ+ S +G + W + AAV+LT+V RQ+G QA FR+ L R+AEG + DW L P + E+ + D+AVHI+PTN AD WNW +LQ+L TPIARIDA+H++ G+ ++RFRG LFLAVGARVFINNN+WT+ GLANGA G V+HM WA G +PP LP+VV+VR+E++RGEQ + ++ GG V LRN VPI PI+A D++PPAA RR RC+R QLPL LAFGITIHKSQG ++ R +DIG E+ DG +FTALSR R+L +LL + C +RL I S +F RL
Sbjct: 1185 QALAVREMVRQLGRQRFLLLAPTGNAACAIGGETIHTGLRVGVQNRPR---GDLGEISESARRDLQQKIQGVDFVLVDEFSMIGQDMLGMMSVRLKQAVEGRRTYWVDDRHLGLFGGLCIIMVGDIIQLLTVAQSPMWTSRPQSSALSGQGLYAWLGMNAAVQLTQVMRQQGAAQAAFRETLLRIAEGEATEADWNTLRPRFTTAVDAAERESFDNAVHIFPTNGAADDWNWRRLQALGTPIARIDADHSMHGYAHIPSDRFRGLEGQLFLAVGARVFINNNVWTSGGLANGAAGEVVHMQWAPGTQPPSLPEVVWVRVENYRGEQYFSEPLERPWGGRVVDLRNVVPISPIDAPDDHPPAALRRRGGGANTNAQGRCIRTQLPLMLAFGITIHKSQGATLLRCFLDIGEQEKSDGQTFTALSRCRALDNMLLQPLFCLERLQRIGTSRTFGARL 1636
BLAST of mRNA_P-lacustris_contig1051.491.1 vs. uniprot
Match: A0A6H5KDL6_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDL6_9PHAE) HSP 1 Score: 402 bits (1033), Expect = 9.880e-133 Identity = 211/422 (50.00%), Postives = 274/422 (64.93%), Query Frame = 1
Query: 133 QTLHRGLSIPLASRARRASADPSDLSPTILQDLQRRLREVDFILVDEFSMIPQALLVLMIIRGKQAGS--------------FGGLNLILVGDPQQLPSVGVASVWNPDPQNGGHSVEGYHVWTHLTAAVELTEVRRQEGDDQAVFRQVLSRVAEGCVRQEDWQVLLPAMRSGRTVKEKSTVDDAVHIYPTNAQADFWNWEQLQSLRTPIARIDAEHTVSGFTSASTERFRGRAPALFLAVGARVFINNNLWTAAGLANGAVGHVLHMHWADGRRPPQLPDVVFVRLEHFRGEQQYFTEMDVNIGGSSVSLRNTVPIVPIEATDENPPAANRRGNRAPGETFPARCVRRQLPLTLAFGITIHKSQGQSMTRAVIDIGRAERPDGLSFTALSRVRSLGGLLLDDVDCDRLLAINNSSSFELRL 1356
QT+H G IP+ R S+DPS ++ L+DLQ R+ EVDFILVDEFSM+ Q +L LM RGKQA FGGL++ILVGDP QLP VG +W +P GG S++G W + AVELT+V RQ+G +QA FR L R+AEG +DW VL + E+ T DDAVHI+PTNA AD WNW +L SL TPIARI+A HT+ G+ + S+ERFRG +FLA+GARVF++N +W +AGLANGAVG V+HM WA+G+ PPQLP+VV+VR+E++RG Q + + + + L N PI P++ D+ PP RRG+ T ARC R QLPL LAFGITI+KS G ++ R +DIG +ER DG SFTA SR R+L +LL+ +R L I +S SF+ RL
Sbjct: 2 QTIHGGFRIPVVQSNR--SSDPSRMTEAALRDLQERMAEVDFILVDEFSMVGQDILGLMSARGKQAVEGRRGDGIEDFRQDVFGGLSIILVGDPAQLPPVGARPLWKHNPSTGGLSMQGLQAWLSMNNAVELTQVMRQQGPEQAAFRDTLLRIAEGMQTADDWDVLKRRFIAAVGAAERETFDDAVHIFPTNALADDWNWRRLNSLGTPIARINATHTIHGYNAVSSERFRGLQSHIFLAIGARVFVHNIVWVSAGLANGAVGEVVHMQWAEGQTPPQLPEVVWVRVENYRGPQYFEQPLRRDWADGEIDLTNLCPIAPMDVMDDQPPTGRRRGDG----TSIARCFRMQLPLMLAFGITIYKSHGNTLLRCSLDIGASERSDGQSFTAFSRCRTLENMLLEPFSLERFLKIGDSRSFQSRL 417
BLAST of mRNA_P-lacustris_contig1051.491.1 vs. uniprot
Match: A0A6H5KFJ0_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFJ0_9PHAE) HSP 1 Score: 381 bits (978), Expect = 4.700e-116 Identity = 191/338 (56.51%), Postives = 241/338 (71.30%), Query Frame = 1
Query: 1 LRLILTGTAGTGETVAIREMVRRIGESRFLLLAPTGNAACAIGGQTLHRGLSIPLASRARRASADPSDLSPTILQDLQRRLREVDFILVDEFSMIPQALLVLMIIRGKQAGS--------------FGGLNLILVGDPQQLPSVGVASVWNPDPQNGGHSVEGYHVWTHLTAAVELTEVRRQEGDDQAVFRQVLSRVAEGCVRQEDWQVLLPAMRSGRTVKEKSTVDDAVHIYPTNAQADFWNWEQLQSLRTPIARIDAEHTVSGFTSASTERFRGRAPALFLAVGARVFINNNLWTAAGLANGAVGHVLHMHWADGRRPPQLPDVVFVRLEHFRGEQ 972
LRL+LTGTAGTG+TV IREMVR +G+ RF+L+APTGNAACAIGG T+H G IP+ R S+DPS ++ L+DLQ R+ EVDFILVDEFSM+ Q +L LM RGKQA FGGL++ILVGDP QLP VG + +W +P GG S++G W + AVELT+V RQ+G +QA FR L R+AEG +DW VL + E+ T DDAVHI+PTNA AD WNW +L SL TPIARI+A HT+ G+ + S+ERFRG +FLA+GARVF+NNN+W +AGLANGAVG V+HM WA+G+ PPQLP+VV+VR+E++RG Q
Sbjct: 1103 LRLLLTGTAGTGKTVVIREMVRLVGQQRFILMAPTGNAACAIGGMTIHGGFRIPVVQSNR--SSDPSRMTEAALRDLQERMAEVDFILVDEFSMVGQDMLGLMSARGKQAVEGRRGDGIEDFRQDVFGGLSIILVGDPAQLPPVGASPLWKHNPSTGGLSMQGLQAWLSMNNAVELTQVMRQQGPEQAAFRDTLLRIAEGMQTADDWDVLKRRFIAAVGAAERETFDDAVHIFPTNALADDWNWRRLNSLGTPIARINATHTIHGYNAVSSERFRGLQSHIFLAIGARVFVNNNVWVSAGLANGAVGEVVHMQWAEGQTPPQLPEVVWVRVENYRGPQ 1438
BLAST of mRNA_P-lacustris_contig1051.491.1 vs. uniprot
Match: A0A6H5KGT1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGT1_9PHAE) HSP 1 Score: 276 bits (705), Expect = 3.350e-84 Identity = 137/262 (52.29%), Postives = 178/262 (67.94%), Query Frame = 1
Query: 571 EDWQVLLPAMRSGRTVKEKSTVDDAVHIYPTNAQADFWNWEQLQSLRTPIARIDAEHTVSGFTSASTERFRGRAPALFLAVGARVFINNNLWTAAGLANGAVGHVLHMHWADGRRPPQLPDVVFVRLEHFRGEQQYFTEMDVNIGGSSVSLRNTVPIVPIEATDENPPAANRRGNRAPGETFPARCVRRQLPLTLAFGITIHKSQGQSMTRAVIDIGRAERPDGLSFTALSRVRSLGGLLLDDVDCDRLLAINNSSSFELRL 1356
+DW VL + E+ T DDAVHI+PTNA AD WNW +L SL TPIARI+A HT+ G+ + S+ERFRG +FLA+GARVF+NNN W +AGLANGAVG V+HM WA+G+ PPQLP+VV+VR+E++RG Q + + + + L N PI P++ D+ PP RRG+ T ARC R QLPL LAFGITI+KSQG ++ R +DIG +ER DG SFTA SR R+L +LL+ +R L I +S SF+ RL
Sbjct: 5 DDWDVLKRRFIAAVGAAERETFDDAVHIFPTNALADDWNWRRLNSLGTPIARINATHTIHGYNAVSSERFRGLQSHIFLAIGARVFVNNNNWVSAGLANGAVGEVVHMQWAEGQTPPQLPEVVWVRVENYRGPQYFEQPLRRDWADGEIDLTNLCPIAPMDVMDDQPPTGRRRGDG----TSIARCFRMQLPLMLAFGITIYKSQGNTLLRCFLDIGASERSDGQSFTAFSRCRTLENMLLEPFSLERFLKIGDSRSFQSRL 262
BLAST of mRNA_P-lacustris_contig1051.491.1 vs. uniprot
Match: UPI00077A905F (ATP-dependent DNA helicase PIF1-like n=1 Tax=Acropora digitifera TaxID=70779 RepID=UPI00077A905F) HSP 1 Score: 236 bits (603), Expect = 1.310e-68 Identity = 155/459 (33.77%), Postives = 249/459 (54.25%), Query Frame = 1
Query: 1 LRLILTGTAGTGETVAIREMVRRIGESRFLLLAPTGNAACAIGGQTLHRGLSIPLASRARRASADPSDLSPTILQDLQRRLREVDFILVDEFSMIPQALLVLMIIRGKQAGS-----FGGLNLILVGDPQQLPSVGVASVWNPDPQNGGHSVEGYHVWTHLTAAVELTEVRRQEGD--DQAVFRQVLSRVAEGCVRQEDWQVLLPAMRSGRTVKEKSTVDDAVHIYPTNAQADFWNWEQLQSLRTPIARIDAEHTVSGFTSASTERFRGRAPALFLAVGARVFINNNLWTAAGLANGAVGHVLHMHWADGRRPPQLPDVVFVRLEHFRGEQQYFTEMDVNIGGSSVSLRNTVPIVPIEATDENPPAANRRGNRAPGETFPARCVRRQLPLTLAFGITIHKSQGQSMTRAVIDIGRAERPDGLSFTALSRVRSLGGLLLDDVDCDRLLAINNSSSFELRL 1356
L LI+ G AGTG++ I +R + + + A TG AA I G T+H L +P+ +R + +L+ L LQ L+ + +I+++E+SM+ Q +L + R +QA FG L+LIL GDP QLP V +++ P + +G+ + T ++L+ +R +G +Q+ FR++L+R+ G ++DW++LL R DA +Y +N + +N E+L +L+ PIA ++A H+ AS + G P +FLA GA V + NLWTA GL NGA G V+ +A+ ++PP LP+ V V+ +++RG TE S+ + VPI PI + + T R+QLPL LA+ ITIHKSQG ++ +A IDIG+ ER G+S+ A+SRVR+L +++ + +RL +I S+S + R+
Sbjct: 92 LFLIVNGVAGTGKSYLINA-IRNLLRTSCAVTATTGKAAYNINGCTIHSLLKLPVGTRGNK------ELTARALVRLQNNLKRIAYIIIEEYSMLGQTMLGWIDRRCRQATGISDEVFGHLSLILFGDPAQLPPVADRPLYHSKPTSS-IGEQGHLAYLMFTNVIKLSVNQRVQGSNPEQSQFRELLTRLHTGDCTEQDWKLLLT--RQPTNAPNLVEFQDATRLYFSNEEVANYNVEKLSALQHPIACVNAHHSSDLAKKASPDEMAGLEPCIFLAKGAHVMLTLNLWTAVGLCNGATGTVIDFIYANNQQPPDLPEAVIVKFDNYRGPS--ITE----------SISSCVPICPITVSSQ---------------TLDGLHERQQLPLKLAWAITIHKSQGLTLPKAWIDIGQTERTAGISYVAISRVRTLSSCIIEPMTFERLKSIKKSASLKFRI 513
BLAST of mRNA_P-lacustris_contig1051.491.1 vs. uniprot
Match: UPI000A2A83DD (uncharacterized protein LOC110235051 n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI000A2A83DD) HSP 1 Score: 243 bits (619), Expect = 5.130e-67 Identity = 158/459 (34.42%), Postives = 254/459 (55.34%), Query Frame = 1
Query: 1 LRLILTGTAGTGETVAIREMVRRIGESRFLLLAPTGNAACAIGGQTLHRGLSIPLASRARRASADPSDLSPTILQDLQRRLREVDFILVDEFSMIPQALLVLMIIRGKQAGS-----FGGLNLILVGDPQQLPSVGVASVWNPDPQNGGHSVEGYHVWTHLTAAVELTEVRRQEGD--DQAVFRQVLSRVAEGCVRQEDWQVLLPAMRSGRTVKEKSTVDDAVHIYPTNAQADFWNWEQLQSLRTPIARIDAEHTVSGFTSASTERFRGRAPALFLAVGARVFINNNLWTAAGLANGAVGHVLHMHWADGRRPPQLPDVVFVRLEHFRGEQQYFTEMDVNIGGSSVSLRNTVPIVPIEATDENPPAANRRGNRAPGETFPARCVRRQLPLTLAFGITIHKSQGQSMTRAVIDIGRAERPDGLSFTALSRVRSLGGLLLDDVDCDRLLAINNSSSFELRL 1356
L LI+ G AGTG++ I + R + +++ + A TG A+ I G T+H L +P+ R + +LS L LQ L+++++IL+DE+SM+ Q L + R KQA + FGGL++IL+GDP QLP V +++ P N +GY + AV+LT +R G +Q FR +L R+ +G +EDWQ+LL R +V+ + ++A ++ +N + +N EQL L+ P A I+A H+ + + ++ G P L+LA GA+V + NLW + GL NGA G V+ + + G PP LP V V+ + +RG F E L++ VPI PI A+ + F R+QLPL LA+ +TIHKSQG ++ +A +DIG++E+ G+S+ A+SRV++L L+L+ + +RL ++ +S++ RL
Sbjct: 954 LCLIIIGVAGTGKSYLINAL-RNLLQNKCAVTATTGKASYNIRGVTIHSLLKLPVGPRGNK------ELSGQSLSRLQDNLKDIEYILIDEYSMLGQTTLGWIDKRCKQAKAIYNRIFGGLSVILIGDPGQLPPVADKPLYHAQPSNP-IGEQGYLAYKMFDMAVKLTVNQRVHGTSYEQQQFRDLLLRLRKGESTKEDWQLLLT--RQPCSVENIADFNNATRLFYSNDEVSSYNHEQLNKLQQPCANINARHSSTTAKNLPSDELSGLEPVLYLAKGAKVMLTMNLWASVGLCNGATGTVIDIIYELGHMPPDLPIAVIVKFDDYRGPA--FIE----------ELQSCVPICPITAS---------------AQLFEGVHERQQLPLRLAYALTIHKSQGLTLAKAWVDIGKSEKTPGVSYVAISRVKTLSSLVLEPMTFERLTSVKSSATLHYRL 1375
BLAST of mRNA_P-lacustris_contig1051.491.1 vs. uniprot
Match: UPI00109BE5C8 (uncharacterized protein LOC110237019 n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI00109BE5C8) HSP 1 Score: 241 bits (614), Expect = 2.740e-66 Identity = 156/459 (33.99%), Postives = 250/459 (54.47%), Query Frame = 1
Query: 1 LRLILTGTAGTGETVAIREMVRRIGESRFLLLAPTGNAACAIGGQTLHRGLSIPLASRARRASADPSDLSPTILQDLQRRLREVDFILVDEFSMIPQALLVLMIIRGKQAGSF-----GGLNLILVGDPQQLPSVGVASVWNPDPQNGGHSVEGYHVWTHLTAAVELTEVRRQEGD--DQAVFRQVLSRVAEGCVRQEDWQVLLPAMRSGRTVKEKSTVDDAVHIYPTNAQADFWNWEQLQSLRTPIARIDAEHTVSGFTSASTERFRGRAPALFLAVGARVFINNNLWTAAGLANGAVGHVLHMHWADGRRPPQLPDVVFVRLEHFRGEQQYFTEMDVNIGGSSVSLRNTVPIVPIEATDENPPAANRRGNRAPGETFPARCVRRQLPLTLAFGITIHKSQGQSMTRAVIDIGRAERPDGLSFTALSRVRSLGGLLLDDVDCDRLLAINNSSSFELRL 1356
L LI+ G AGTG++ I + R + +++ + A TG A+ I G T+H L +P+ R + DLS L LQ +E+D+IL+DE+SM+ Q L + R KQA S GGL+LIL+GDP QLP V +++ P N +GY + V+LT +R EG +Q FR +L R+ +G EDW++LL R ++ DDA ++ +N + +N EQ+ L+ P A I+A H+ + + ++ G P + LA GA+V + NLW GL NGA G V+ + +A RPP LP V V+ + +RG S +L + VPI PI A+ ++ + R +QLPL L++ +TIHKSQG ++++A I+IG++E+ G+S+ A+SRV++L L+++ + +RL ++ +S++ + RL
Sbjct: 1589 LCLIIVGVAGTGKSYLINAL-RNLLQNKCAVTATTGKASYNIKGVTIHSLLKLPVGPRGNK------DLSGQSLLRLQENFKEIDYILIDEYSMLGQTTLGWIDKRCKQAKSIYDKVDGGLSLILIGDPGQLPPVADKPLYHAQPSNY-IGEQGYLTYKMFDKVVKLTVNQRVEGSSYEQQQFRDLLLRLRKGESTTEDWKLLLT--RQPSNIENIEEFDDATRLFYSNEEVTSYNNEQVNKLQQPCANINARHSSALAKTLPSDEMYGLEPTISLAKGAKVMLTMNLWAXVGLCNGATGTVVDIIYAINHRPPDLPIAVIVKFDDYRGPS------------ISENLPSCVPICPITASSQSIEGIHER---------------QQLPLRLSYALTIHKSQGLTLSKAWINIGKSEKTPGISYVAISRVKTLASLVIEPMSFERLTSVRSSTTLQYRL 2010
BLAST of mRNA_P-lacustris_contig1051.491.1 vs. uniprot
Match: UPI000A2A6B3A (uncharacterized protein LOC110247455 n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI000A2A6B3A) HSP 1 Score: 232 bits (592), Expect = 2.120e-65 Identity = 153/459 (33.33%), Postives = 246/459 (53.59%), Query Frame = 1
Query: 1 LRLILTGTAGTGETVAIREMVRRIGESRFLLLAPTGNAACAIGGQTLHRGLSIPLASRARRASADPSDLSPTILQDLQRRLREVDFILVDEFSMIPQALLVLMIIRGKQAGSF-----GGLNLILVGDPQQLPSVGVASVWNPDPQNGGHSVEGYHVWTHLTAAVELTEVRRQEGD--DQAVFRQVLSRVAEGCVRQEDWQVLLPAMRSGRTVKEKSTVDDAVHIYPTNAQADFWNWEQLQSLRTPIARIDAEHTVSGFTSASTERFRGRAPALFLAVGARVFINNNLWTAAGLANGAVGHVLHMHWADGRRPPQLPDVVFVRLEHFRGEQQYFTEMDVNIGGSSVSLRNTVPIVPIEATDENPPAANRRGNRAPGETFPARCVRRQLPLTLAFGITIHKSQGQSMTRAVIDIGRAERPDGLSFTALSRVRSLGGLLLDDVDCDRLLAINNSSSFELRL 1356
L LI+ G AGTG++ I + R + +++ + A TG A+ I G T+H L +P+ R + DLS L LQ +L E+++IL+DE+SM+ Q + R KQA F GG+++IL+GDP QLP V +++ P N +GY + V+LT +R +G +Q FR++L R+ +G +DW++LL R ++ S +DA ++ +N + +N +QL L P A I+A H+ S ++ G P++ +A GA+V + NLW + GL NGA G V+ + +A RPP LP V VR ++++G L VPI PI + + R+QLPL LA+ +TIHKSQG ++++A IDIG++E+ G+S+ A+SRV++L L+++ + +RL AI +S++ RL
Sbjct: 275 LCLIIIGVAGTGKSYLINAL-RSLLQNKCSVTATTGKASFNIQGITVHSLLKLPVGPRGAK------DLSGQTLSRLQEKLNEIEYILIDEYSMLGQTTFGWIDKRCKQATGFHDKVHGGMSMILIGDPGQLPPVVDKPLYHAQPSNP-IGEQGYLTYQMFDKVVKLTANQRVQGSSSEQQQFRELLLRLRKGESTVQDWKLLLT--RQPSCIENISEFNDATRLFYSNDEVSAYNLDQLTKLMEPCANINARHSSVTAKSLPSDEMSGLQPSISIAKGAKVMLTMNLWASVGLCNGATGTVVDIIYAVDHRPPDLPIAVIVRFDNYQGPSL------------REDLPMCVPICPITVS---------------AQALEGVQERQQLPLKLAYALTIHKSQGLTLSKAWIDIGKSEKTPGISYVAISRVKTLSSLVIEPMTFERLTAIKSSTTLHYRL 696
BLAST of mRNA_P-lacustris_contig1051.491.1 vs. uniprot
Match: A0A6S7GPP1_PARCT (ATP-dependent DNA helicase n=3 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7GPP1_PARCT) HSP 1 Score: 238 bits (607), Expect = 2.350e-65 Identity = 154/459 (33.55%), Postives = 250/459 (54.47%), Query Frame = 1
Query: 1 LRLILTGTAGTGETVAIREMVRRIGESRFLLLAPTGNAACAIGGQTLHRGLSIPLASRARRASADPSDLSPTILQDLQRRLREVDFILVDEFSMIPQALLVLMIIRGKQAGS-----FGGLNLILVGDPQQLPSVGVASVWNPDPQNGGHSVEGYHVWTHLTAAVELTEVRRQEG--DDQAVFRQVLSRVAEGCVRQEDWQVLLPAMRSGRTVKEKSTVDDAVHIYPTNAQADFWNWEQLQSLRTPIARIDAEHTVSGFTSASTERFRGRAPALFLAVGARVFINNNLWTAAGLANGAVGHVLHMHWADGRRPPQLPDVVFVRLEHFRGEQQYFTEMDVNIGGSSVSLRNTVPIVPIEATDENPPAANRRGNRAPGETFPARCVRRQLPLTLAFGITIHKSQGQSMTRAVIDIGRAERPDGLSFTALSRVRSLGGLLLDDVDCDRLLAINNSSSFELRL 1356
L LI+ G AGTG++ I +R + +++ + A TG AA I G T+H L +P+ SR + DL+ L LQ+ L+++++I++DE+SM+ Q + R KQA FG +LIL GDP QLP V +++ P N +G+ + ++LT +R +G DQ +FR +L R+ +G +DW++LL R +V S DDA ++ +N Q +N EQL L PIA I+A H+ + ++ G P +FLA GARV + NLW++ GL NGA G ++ + + + + PP LP V V E++RG +F+E VPI PI + + + R +QLPL LA+ +TIHKSQG ++++A ID+G++ER G+S+ A+SRV++L +++ + +RL ++ +S++ + RL
Sbjct: 1198 LCLIINGVAGTGKSYLINA-IRNLLQNKCAVTATTGKAAYNIKGVTIHSLLKLPIGSRGAK------DLTGQSLCRLQQNLKDINYIIIDEYSMLGQVTFGWIDKRCKQATGCHDKVFGEKSLILTGDPGQLPPVADKPLYHAKPSNAVGE-QGHQAYRMFDKVIKLTVNQRVQGMTSDQVLFRDLLLRLRKGESTLDDWKLLLT--RQPSSVSNLSEFDDATRLFYSNEQVANYNHEQLTKLANPIAHINARHSSAVAKKMPSDEMSGLEPVVFLAKGARVMLTMNLWSSVGLCNGATGTIVDIVFQNNQNPPDLPIAVIVNFENYRGP--HFSE----------ERPMCVPICPITVSSQTEGGFHER---------------QQLPLRLAWALTIHKSQGLTLSKAWIDVGKSERTAGVSYVAISRVKTLASCVIEPMTYERLTSLKSSANLQYRL 1619 The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig1051.491.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-lacustris_contig1051.491.1 >prot_P-lacustris_contig1051.491.1 ID=prot_P-lacustris_contig1051.491.1|Name=mRNA_P-lacustris_contig1051.491.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=452bp LRLILTGTAGTGETVAIREMVRRIGESRFLLLAPTGNAACAIGGQTLHRGback to top mRNA from alignment at P-lacustris_contig1051:54595..56145+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-lacustris_contig1051.491.1 ID=mRNA_P-lacustris_contig1051.491.1|Name=mRNA_P-lacustris_contig1051.491.1|organism=Pleurocladia lacustris SAG_25_93|type=mRNA|length=1551bp|location=Sequence derived from alignment at P-lacustris_contig1051:54595..56145+ (Pleurocladia lacustris SAG_25_93)back to top Coding sequence (CDS) from alignment at P-lacustris_contig1051:54595..56145+ >mRNA_P-lacustris_contig1051.491.1 ID=mRNA_P-lacustris_contig1051.491.1|Name=mRNA_P-lacustris_contig1051.491.1|organism=Pleurocladia lacustris SAG_25_93|type=CDS|length=2712bp|location=Sequence derived from alignment at P-lacustris_contig1051:54595..56145+ (Pleurocladia lacustris SAG_25_93)back to top |