mRNA_P-lacustris_contig1043.433.1 (mRNA) Pleurocladia lacustris SAG_25_93
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_P-lacustris_contig1043.433.1 vs. uniprot
Match: D8LN58_ECTSI (Ribonuclease P n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN58_ECTSI) HSP 1 Score: 842 bits (2176), Expect = 2.010e-286 Identity = 614/1063 (57.76%), Postives = 703/1063 (66.13%), Query Frame = 1 Query: 472 PEPPQGPPPFAEGGESL--------ETAARMSIEAIAAALESGQSQIADVGSSFTNGLHDQHGQEIRRSSSDRDRRGEAAAGDVSSRD------VGGRRK-GKLDGQQ--PGVVVGQGPSTLD-GSEGGGGTGGGEKSTGVPEKLSPRKRRARKSEEQTRQENDLQNAVALALKADSAEETLLAFNSVMEAGVSLKGHLLSGVLNQCAKAGLMDDCRRVVLEMKARGMVIEENTYVPLIRGMVSLGNCQGAFDLIKDMVNQGVQPRLRCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSYLCALSVAGELWESARSGKLDDKLLQMSYHARNLTMEQVELLEDHFNAIPVVS-PSNGINDDSGL--DPKVVAIVEAARSSPPLAQRVKVAGGHEVENDGWEREWSSGEPTAAEAPDRCPACGDALRAVGLTADEKARIRETLFGLAGLQVKKHAKSRHAKLLARKRQSGGRDQAAYSFTDEDQKEQLQIFVDWLHAQRADGKTYTAVIDSANVAYHKGSAFHFSLPQVDLVVHALEAKGERPLVVIAEKYIDRVGDLHDNLTPGAGAFKYMNNPLNKSIVKRWRAKSQLYECSDEASDDWYWMYAAVAFDDIPMTVISNDKMRDHRMSVAEEVPYLRWRTTQLAQFELSYPMNDMV-KRTSPQSWPKNPPMVAIQPPPAFTRDVQKSEQGCWHVPAGADDEWLCIDVQRGLRMGLDQLVPAARKKRSGKAAESPRWTGDLGEDSGVSATAVTSGGDGRRRAASEEDDKLREVGGLLQSMRAKKQPTRLFRYSTQGTVAEAAMAAKQAAAIARXXXXXXXXXXXXXXXXXXXXXXXXXXXXPXXXXXXXXXXXXXXXLTESQFAAALNDDGLVKDSFGQQRRATSDDGMXXXXXXXXXXXXXXXXXXXXXXXXXXHLGMRRVVHAADTAAAPPAPGLPAAPATTAPVKNTAVAATRGATSRLGKLRDRG--GRNRVLDGQGSSSPVGSGTRDNCVEGGHEDGVGKDLGTDASAVEFEQHRHRLSCLTVPALKYELRQKGLKVSGKKAELVERLLQA 3588
P+PPQG P + GG S+ ++AA +SIE+IA+ LESGQSQ + S+ N Q Q R SS D+ RG+AAA + SR+ VG ++ G DG+ PG G + D G GG G E+S G P KLS RKRRAR+ + +T +E LQN VALALKADSAEETL +FN+ ME GV+L+ +LL GVLNQCAKAGLMDDC RVV+EMK XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX V+YLC LSVAGELW++ARSGKLD+KLL+MSYHARNLTM QVE LE+HFNA+P+ + PS IN D+G D AI EA +SS PLA+RVKVAGGHE+++D W REWSS +PT AE P CPACG ALRAVGLT E+ARIRETLFGLAGLQVKKHA+SRH K+LAR RQ G + YSFTDEDQKEQLQIFVDWLHAQRADGKTYTAVIDSANVAYHKGSAFHFSLPQVDL+V ALEAKGERPLV+IAEKYIDRVGDL+DN +P G F+YM+NPLNK+IVKRWRAKSQLYECSDEASDDWYWMYA VAFDDIPMTVISND+ RDHRMS+AE VPYLRWRTTQLAQFEL+YP+ D++ K +PQ WP NPP VAIQPPPAFTRDVQKSEQGCWHVPAGADDEWLCIDVQRGLRMGLD+L+P RK A+SP G+ + S V+SGG R A EDD LR+VGGLLQSMR +KQ +R + XXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXX +S +A L D G+ V AA AA PPAP +PAAP T ++ T GA S+ +R G G VL + S S D+ E G E+ V D +A E EQHR R S + V +LK ELR +GLKVSGKKAELVERLL+A
Sbjct: 81 PQPPQGVSP-SSGGRSVGAAVAPRTQSAAPISIESIASTLESGQSQTSSARSNGNNPSDQQQQQVWRDSSFDQRGRGDAAAAGLRSRNTEEPGWVGDDQEPGYDDGRNGFPGGRAGVANAARDPGVVEGGDIVGEEQSKGNPNKLSLRKRRARERKRETPEEKQLQNEVALALKADSAEETLRSFNTAMEMGVALRANLLRGVLNQCAKAGLMDDCMRVVMEMKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEQYVNYLCGLSVAGELWDNARSGKLDEKLLEMSYHARNLTMGQVEQLEEHFNAVPLAATPSIPINGDAGAVGDTNAFAITEAVKSSVPLARRVKVAGGHEIDDDSWTREWSSRKPTRAERPHSCPACGGALRAVGLTDGERARIRETLFGLAGLQVKKHARSRHTKMLARSRQRQGNENPFYSFTDEDQKEQLQIFVDWLHAQRADGKTYTAVIDSANVAYHKGSAFHFSLPQVDLMVQALEAKGERPLVLIAEKYIDRVGDLYDN-SPARGGFRYMSNPLNKAIVKRWRAKSQLYECSDEASDDWYWMYATVAFDDIPMTVISNDRTRDHRMSLAETVPYLRWRTTQLAQFELTYPLKDIMGKGLNPQGWPANPPQVAIQPPPAFTRDVQKSEQGCWHVPAGADDEWLCIDVQRGLRMGLDKLMPTPRKTHPNIHADSP--PGETNDGSARDVAMVSSGGGARTGGA--EDDTLRKVGGLLQSMRVRKQHSR---------------------SSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQTTGGVSRDSPYARVLAADAARVKDRGED-----------------------------------------VGSAAAAAAIPPAP-VPAAPKATPRDPDSISTTTGGAASQPPGIRHTGERGARAVLPPETSRSTAADAIEDSLKEDGAEERVSD---VDETASENEQHRQRWSSMKVVSLKEELRSRGLKVSGKKAELVERLLRA 1071
BLAST of mRNA_P-lacustris_contig1043.433.1 vs. uniprot
Match: A0A6H5KNL2_9PHAE (PPR_long domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNL2_9PHAE) HSP 1 Score: 302 bits (773), Expect = 8.220e-86 Identity = 287/638 (44.98%), Postives = 344/638 (53.92%), Query Frame = 1 Query: 64 PWLDLSGYQESPVGRNRKGRGRYGAVDGGMH-RASSQYGALLILALQLVLL---LVSSERCSGFAAVPHGGAGLHFFLSPSI----SRGLSW-SLQQHGCEQPTGCGGGRPNTAARHWRSKSILAVAAAGGDGPSTNAGVAPQQ------------------------QPEPPQGPPPFAEG-------GESLETAARMSIEAIAAALESGQSQIADVGSSFTNGLHDQHGQEIRRSSSDRDRRGEAAAGDVSSRDVGGRRKGKLDGQQPGVVVGQG--PSTLDGSE---------GGGGTGGGEKSTGVPEKLSPRKRRARKSEEQTRQENDLQNAVALALKADSAEETLLAFNSVMEAGVSLKGHLLSGVLNQCAKAGLMDDCRRVVLEMKARGMVIEENTYVPLIRGMVSLGNCQGAFDLIKDMVNQGVQPRLRCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSYLCALSVAGELWESARSGKLDDKLLQMSYHARNLTMEQVELLEDHFNAIPVVS-PSNGINDDSGL--DPKVVAIVEAARSSPPLAQRVKVAGGHEVENDGWEREWSSGEPTAAEAPDRCPACGDALRAVGLTADEKARIRETLFGLAGLQVKKHAKSRHAKL 1815
P L +SG Q R RK RGR GA+ G + S++ G + ++S E CSGF GL + S RG+S S QQHG E G G + + RS+ + VAA D P++N Q +PPQG P + G ++AA +SIE+IA+ LE GQSQ + Q R S D+ RG+AAA + SR+ R G D Q+PG G+ P G+ GGG T G EKS G P KLS RKRRAR +T +E LQN +ALALKADSAEE L +FN+ ME GV+L+ +LL GVLNQCAKAGL XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX V+YLC LSVAGELW++ARSGKLD+KLL MSYHARNLTM QVE LE+HFNA+P+ + PS IN D+G D AI E SS PLA+RVKVAGGHE+++D W REWSS +PT AE PD CPACG ALRAVGLT E+ARIRETLFGLAGLQVKKHA+SR A++
Sbjct: 5 PQLGVSGCQAVTAIRERKQRGRRGALHGSRATQQSAREGGRSVTPXXXXXXXXXVLSPELCSGFTT------GLSAVTTRSCWAPSRRGVSMPSSQQHGREWHGCTGRGVDRSRSESGRSRRLQTVAAES-DSPNSNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQVQPPQGVSPSSSGRSVGAAVAPRTQSAAPISIESIASLLERGQSQTSTARXXXXXXXXXXXQQVWRDDSFDKRGRGDAAAAGLRSRNTEERGAGGAD-QEPGYHGGRNGFPGGRAGAANAVRDPGVVGGGDTVGEEKSKGNPNKLSLRKRRARXXXXETPEEKQLQNEIALALKADSAEEALRSFNTAMEMGVALRANLLRGVLNQCAKAGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEQYVNYLCGLSVAGELWDNARSGKLDEKLLDMSYHARNLTMGQVEQLEEHFNAVPLAAAPSIPINGDAGAVGDTNACAITEI--SSVPLARRVKVAGGHEIDDDSWTREWSSRKPTRAERPDSCPACGGALRAVGLTDGERARIRETLFGLAGLQVKKHARSRRARI 632
BLAST of mRNA_P-lacustris_contig1043.433.1 vs. uniprot
Match: A0A835ZAC6_9STRA (Ribonuclease P n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAC6_9STRA) HSP 1 Score: 146 bits (368), Expect = 4.600e-33 Identity = 140/554 (25.27%), Postives = 219/554 (39.53%), Query Frame = 1 Query: 910 LQNAVALALKADSAEETLLAFNSVMEAGVSLKGHLLSGVLNQCAKAGLMDDCRRVVLEMKARGMVIEENTYVPLIRGMVSLGNCQGAFDLIKDMVNQGVQPRLRCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSYLCALSVAGELWESARSGKLDDKLLQMSYHARNLTMEQVELLEDHFNAIPVVSPSNGINDDSGLDPKVVAIVEAARSSPPLAQRVKVAGGHEVENDGWEREWSSGEPTAAEAPDRCPACGDALRAVGLTADEKARIRETLFGLAGLQVKKHAKSRHAKLLARKRQSGGRDQAAYSFTDEDQKEQLQIFVDWLHAQRADGKTYTAVIDSANVAYHKGS--AFHFSLPQVDLVVHALEAKGERPLVVIAEKYIDRVGDLHDNLTPGAGAFKYMN------NPLNKSIVKRWRAKSQLYE-------------------CSDEASDDWYWMYAAVAFDDI--PMTVISNDKMRDHRMSVAEEVPYLRWRTTQLAQFELSYPMNDMVKRTSPQSWPKNPPMVAIQPPPAFTRDVQ 2484
L + LKA + + + +V + G ++ + +GV+N C + + ++ M+ G + +EN+Y L+R S G XXX V+ L S++G+LW +G++D L ++SY L + +E L+ FNA GL P+A V V G CPAC L+A+GLT E+ ++R L +A + + ++ + D L F WL +RA +TAV+D+ NVAYH + F + QVD VV LEA+GER LVV E+Y+ + P + F + +P +I++ W K LY C++ +DDWYWMY VAFD++ P+TV+SND MRDHR+++ E P++RW+ TQ ++ Y + S +S V + PP FTRD+Q
Sbjct: 33 LHRGLVATLKAADGDGAVALYMAVRKRGYTVPRGIYNGVINLCGNSSRVAVGLQIFEHMREAGHLPQENSYAFLVRERASRGAFXXXXXXXXXXXXXXXXXXXXXXXXLLQGLCAVPDMTMAWRVWAHMKGQGVVATPDLYVTMLRGASLSGDLWSMVATGEVDALLAELSYEVFELDGDLIEQLQQAFNA--------------GLQ-------------EPVASMVSVESG---------------------GKGSCPACTSHLKAIGLTPREREKVRRALRVMATEKFPANGSAKASSAXXXXXXXXXXXXXXXXXADT-----LLNFAQWLR-ERA---KFTAVVDAPNVAYHNQNFPGGCFQMAQVDAVVQKLEARGERVLVVCPERYLRAI-------IPNSTRFARLQRKRTVLSPQALAIIRSWEEKGILYRQVRYQLVLCCSYVPTLAGRCANTDNDDWYWMYLTVAFDNVAAPVTVVSNDLMRDHRLALLEPTPFVRWKRTQ----QMRYYFPRVALEGSTESLE-----VDLFDPPPFTRDIQ 513
BLAST of mRNA_P-lacustris_contig1043.433.1 vs. uniprot
Match: A0A7S3XLJ8_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XLJ8_HETAK) HSP 1 Score: 102 bits (253), Expect = 2.750e-20 Identity = 61/188 (32.45%), Postives = 96/188 (51.06%), Query Frame = 1 Query: 2035 LEAKGERPLVVIAEKYIDRVGDLHDNLTP------GAGAFKYMNNPLN---KSIVKRWRAKSQLYECSDEASDDWYWMYAAVAFDDIP------------MTVISNDKMRDHRMSVAEEVPYLRWRTTQLAQFELSYPMNDMVKRTSPQSWPKNPPMVA-IQPPPAFTRDVQKSEQGCWHVPAGADDE 2532
+E+ G R LVVI E+Y+DR + N T +G F + + P+ + I+ +W A+ +Y + +DDWYWMYA V D + V++NDKMRDHR+S+ P+ RWR+TQ+ F++ + P +VA + PP F+R+VQ ++ G WHVP ++
Sbjct: 1 MESMGHRVLVVIPERYMDR--EKIPNTTRIKKSNRASGKFYHPSEPVTDEQREIMDKWTAQGDIYTVAKHNNDDWYWMYATVVNRDGQAEEEEEDKEGHRLMVVTNDKMRDHRLSLLTPRPFFRWRSTQIMNFDIRKEQDI-------------PYLVATVLDPPVFSREVQMTDNGVWHVPIAEKED 173
BLAST of mRNA_P-lacustris_contig1043.433.1 vs. uniprot
Match: A0A1Z5J5P3_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5J5P3_FISSO) HSP 1 Score: 103 bits (258), Expect = 5.550e-19 Identity = 80/249 (32.13%), Postives = 126/249 (50.60%), Query Frame = 1 Query: 1681 RCPACGDALRAVGLTADEKARIRETLFGLAGLQVKKHAKSRHAKLLARKRQSGGRDQAAYSFTDEDQKEQLQIFVDWLHAQRADGKTYTAVIDSANVAYHKGSAFHFSLPQVDLVVHALEAKGERPLVVIAEKYIDRVGDLHDNLTPGAGAFKYMNNPLNKSIVKRWRAKSQLYECSDEASDDWYWMYAAVAFDD------------IPMT-----VISNDKMRDHRMSVAEEVPYLRWRTTQLAQFEL 2376
+CPA G LR + LT ++ ++ +TL +AG Q +++ AKL AR + + Y+ +EQL+ F DWL + YTA++D NVAY H+S QV VV L+ GERPLVV+ +KY+ R L G G + +N+ +++I+ + K +Y DD+YWM A+VA P+T +I+ND+MRDHR+++ E + RW + + + L
Sbjct: 347 KCPATGVTLRLMALTPSQRQQVHDTLLEMAGTQHEEYG----AKLQARGKAMEEKRNGQYA------QEQLRQFSDWLKQRET---PYTAIVDGPNVAYFGHGNVHYS--QVWEVVQELQRLGERPLVVMPQKYLSRSFWLS-----GLGKVQELNDQ-DQAIIDK--LKDCMYVVPSTCLDDYYWMLASVAEQGSTDFVIVQQDQMFPLTGLRPLLITNDQMRDHRLALLEPRLFRRWTSCHIVNYML 572
BLAST of mRNA_P-lacustris_contig1043.433.1 vs. uniprot
Match: A0A1Z5KPE3_FISSO (Ribonuclease P n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KPE3_FISSO) HSP 1 Score: 99.8 bits (247), Expect = 1.170e-17 Identity = 76/249 (30.52%), Postives = 125/249 (50.20%), Query Frame = 1 Query: 1681 RCPACGDALRAVGLTADEKARIRETLFGLAGLQVKKHAKSRHAKLLARKRQSGGRDQAAYSFTDEDQKEQLQIFVDWLHAQRADGKTYTAVIDSANVAYHKGSAFHFSLPQVDLVVHALEAKGERPLVVIAEKYIDRVGDLHDNLTPGAGAFKYMNNPLNKSIVKRWRAKSQLYECSDEASDDWYWMYAAVA-----------------FDDIPMTVISNDKMRDHRMSVAEEVPYLRWRTTQLAQFEL 2376
+CPA G LR + LT ++ ++ +TL +AG Q +++ AKL AR + + ++ +EQL+ F DWL + +YTA++D NVAY H+S QV VV L+ GERPLVV+ +KY+ R L G G + +++ +++I+ + K +Y DD+YWM A+VA + +I+ND+MRDHR+++ E + RW + + + L
Sbjct: 344 KCPATGVTLRLMALTPPQRQQVHDTLLEMAGTQHEEYG----AKLQARGKAMEEKRNGQFA------QEQLRQFSDWLKQRET---SYTAIVDGPNVAYFGHGNVHYS--QVWEVVQELQRLGERPLVVMPQKYLSRSFWLS-----GLGKVQELSDQ-DQAIIDK--LKDCMYVVQSTCLDDYYWMIASVADQGSTDFATLQKDQTFQLTGLRPLLITNDQMRDHRLALLEPRLFRRWTSCHIVNYML 569
BLAST of mRNA_P-lacustris_contig1043.433.1 vs. uniprot
Match: A0A448ZE27_9STRA (Ribonuclease P n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZE27_9STRA) HSP 1 Score: 95.1 bits (235), Expect = 5.570e-16 Identity = 91/317 (28.71%), Postives = 141/317 (44.48%), Query Frame = 1 Query: 1669 EAPDRCPACGDALRAVGLTADEKARIRETLFGLAGLQVKKHAKSRHAKLLARKRQSGGRDQAAYSFTDEDQKEQLQIFVDWLHAQRADGKTYTAVIDSANVAYHKGSAFH--FSLPQVDLVVHALEAKGERPLVVIAEKYIDRVGDLHDNLT--PGAGAFKYMNNPLNKSIVKRWRAKSQLYECSDEASDDWYWMYAAVAFDD--IPMT------------VISNDKMRDHRMSVAEEVPYLRWRTTQLAQFELSYPMNDMVKRTSPQSWPKNPPMVAIQPPPAFTRDVQ--KSEQGC-WHVPAGA--DDEWLCIDV 2550
E +C G LR + L + +K + R+ L L V + RH ARK D E+L+ F DWL Q+ DGK++TA+ID N+AY+ + F+ Q+ V ALE GE+ LVV+ +KY +D+ T G K + K I +K + + DD+YWM+A+V+ D+ +P +ISNDK+RDH+MS+ E + RW + L F S +ND + + ++R++Q E G WH P ++E +CI +
Sbjct: 749 ETTGKCARSGSQLRLINLDSAQKKKFRDGLLYL----VSSSYQERHRN--ARK---------------VDVAEKLKRFGDWL--QKKDGKSFTAIIDGPNIAYYMQNFQQGTFNYHQIKFVADALENMGEKILVVLPKKYT------YDSFTIQVGGRTVKQTLSLEEKQIRDDLLSKGKACVVPVGSLDDYYWMFASVSMDEEFVPPNNAEGRWPGNRPMLISNDKLRDHKMSLLEPRLFRRWYSNFLVNFTFSAFVNDECTDRE----------IGFRTADFYSREIQGNSDENGTTWHFPVTDWDENESMCIRI 1026
BLAST of mRNA_P-lacustris_contig1043.433.1 vs. uniprot
Match: A0A6V7Q716_ANACO (PRORP domain-containing protein n=1 Tax=Ananas comosus var. bracteatus TaxID=296719 RepID=A0A6V7Q716_ANACO) HSP 1 Score: 86.3 bits (212), Expect = 7.160e-15 Identity = 64/223 (28.70%), Postives = 98/223 (43.95%), Query Frame = 1 Query: 1900 FVDWLHAQRADGKTYTAVIDSANVAYHKGSAFHFSLPQVDLVVHALEA---KGERPLVVIAEKYIDRVGDLHDNLTPGAGAFKYMNNPLNKSIVKRWRAKSQLYECSDEASDDWYWMYAAVAFDDIPMTVISNDKMRDHRMSVAEEVPYLRWRTTQLAQFELSYPMNDMVKRTSPQSWPKNPPMVAIQPPPAFTRDVQKSEQGCWHVPAGADDE------WLC 2541
F +WL + AVID+ANV + +FSL Q++ VV+ + + PL+V LH A + P NK +++ WR LY ++DDWYW+YAAV+ + V++ND+MRDH + + RW+ + S R P A PP ++R +Q+SE G WH+P D+ W+C
Sbjct: 47 FQEWLERNGP----FDAVIDAANVGLYNQK--NFSLFQLNSVVNGMRQMSRSNKLPLIV-----------LHSRRVKSGPA----DAPNNKKLIESWRRAGTLYATPPGSNDDWYWLYAAVSCRSL---VVTNDEMRDHLFQLLGTSFFPRWKEKHQVRLTFS--------RRGP----------AFHMPPPYSRVIQESEGGSWHIPTLTGDDIEAPRQWIC 227
BLAST of mRNA_P-lacustris_contig1043.433.1 vs. uniprot
Match: A0A6J1CUX7_MOMCH (Ribonuclease P n=1 Tax=Momordica charantia TaxID=3673 RepID=A0A6J1CUX7_MOMCH) HSP 1 Score: 91.3 bits (225), Expect = 7.330e-15 Identity = 73/270 (27.04%), Postives = 118/270 (43.70%), Query Frame = 1 Query: 1867 TDEDQKEQLQIFVDWLHAQRADGKTYTAVIDSANVAYHKGSAFHFSLPQVDLVVHALEAK---GERPLVVIAEKYIDRVGDLHDNLTPGAGAFKYMNNPLNKSIVKRWRAKSQLYECSDEASDDWYWMYAAVAFDDIPMTVISNDKMRDHRMSVAEEVPYLRWRTTQLAQFELSYPMNDMVKRTSPQSWPKNPPMVAIQPPPAFTRDVQKSEQGCWHVPAGA------DDEWLCID--------VQRGLRMGLDQLVPAARKKRSGKAAE 2625
T +++ Q F WL + AVID+ANV S F+ +V L+ + + K + PL+V LH+ G + M+ P+NK+++++W+ LY ++DDWYW+YAA+ F +++ND+MRDH + + RW+ F S T P V PPP +Q+SE+G WHVP + D +WLC+ V++ + +++ P K S AE
Sbjct: 560 TQKEKNSSFQKFQKWLEYYGP----FEAVIDAANVGLF--SQRKFTPSKVHLIANGIRQKLPSKKWPLIV-----------LHNRRITG----RKMDEPVNKTLIEKWKNADALYATPTGSNDDWYWLYAAIKF---KCLIVTNDEMRDHTFQLLGNDFFPRWKERHQVHFSFS--------ATGP---------VFHMPPPCSVV-IQESEKGHWHVPIASEHSYEEDRKWLCVTRGNSQSHMVRQESPLKIEESEPLLSKGNSRTRAE 787
BLAST of mRNA_P-lacustris_contig1043.433.1 vs. uniprot
Match: A0A1S4E3W0_CUCME (Ribonuclease P n=2 Tax=Cucumis TaxID=3655 RepID=A0A1S4E3W0_CUCME) HSP 1 Score: 90.9 bits (224), Expect = 9.790e-15 Identity = 68/235 (28.94%), Postives = 104/235 (44.26%), Query Frame = 1 Query: 1867 TDEDQKEQLQIFVDWLHAQRADGKTYTAVIDSANVAYHKGSAFHFSLPQVDLVVHALEAK---GERPLVVIAEKYIDRVGDLHDNLTPGAGAFKYMNNPLNKSIVKRWRAKSQLYECSDEASDDWYWMYAAVAFDDIPMTVISNDKMRDHRMSVAEEVPYLRWRTTQLAQFELSYPMNDMVKRTSPQSWPKNPPMVAIQPPPAFTRDVQKSEQGCWHVPAGA------DDEWLCI 2544
T ++ Q F WL + AVID+ANV S F+ +V+L+ + + K + PL+V LH+ G + M P+NK+++++W+ LY ++DDWYW+YAA+ F +++ND+MRDH + + RW+ F S T P V PPP +Q+SE G WHVP + D +WLCI
Sbjct: 575 TQREKNSSFQKFQKWLEYYGP----FEAVIDAANVGLF--SQRKFTPAKVNLIANGIRQKLPSKKWPLIV-----------LHNRRITG----RKMEEPVNKTLIEKWKNADALYATPTGSNDDWYWLYAAIKF---KCLIVTNDEMRDHTFQLLGNDFFPRWKERHQVHFSFS--------ATGP---------VFHMPPPCSVV-IQESENGHWHVPLASEHSYEEDRKWLCI 767 The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig1043.433.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-lacustris_contig1043.433.1 >prot_P-lacustris_contig1043.433.1 ID=prot_P-lacustris_contig1043.433.1|Name=mRNA_P-lacustris_contig1043.433.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=1179bp MRGPWLDLSGYQESPVGRNRKGRGRYGAVDGGMHRASSQYGALLILALQLback to top mRNA from alignment at P-lacustris_contig1043:7802..28176- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-lacustris_contig1043.433.1 ID=mRNA_P-lacustris_contig1043.433.1|Name=mRNA_P-lacustris_contig1043.433.1|organism=Pleurocladia lacustris SAG_25_93|type=mRNA|length=20375bp|location=Sequence derived from alignment at P-lacustris_contig1043:7802..28176- (Pleurocladia lacustris SAG_25_93)back to top Coding sequence (CDS) from alignment at P-lacustris_contig1043:7802..28176- >mRNA_P-lacustris_contig1043.433.1 ID=mRNA_P-lacustris_contig1043.433.1|Name=mRNA_P-lacustris_contig1043.433.1|organism=Pleurocladia lacustris SAG_25_93|type=CDS|length=7074bp|location=Sequence derived from alignment at P-lacustris_contig1043:7802..28176- (Pleurocladia lacustris SAG_25_93)back to top |