mRNA_P-lacustris_contig104.419.1 (mRNA) Pleurocladia lacustris SAG_25_93

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-lacustris_contig104.419.1
Unique NamemRNA_P-lacustris_contig104.419.1
TypemRNA
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Homology
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BLAST of mRNA_P-lacustris_contig104.419.1 vs. uniprot
Match: D7G3K9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G3K9_ECTSI)

HSP 1 Score: 400 bits (1028), Expect = 1.600e-138
Identity = 199/229 (86.90%), Postives = 211/229 (92.14%), Query Frame = 1 
Query:   10 PPSDSLPQEDAEGCHLISENYAYALQLILGFAALAGLVFKRWRAPVKRDLVVWMFDVSKQGFGSLFIHMWNIFLSIYEGVGKPGSDECAMYFVNFSLDIAIGTFMIWCFVRVQEITAVRFGIGSLQVTGDYGTPPLFSVYRAQLAAYMVILGICKSVTTFIVIAMDEVLSSLAKALFAPVSAFPELELTLVMIICPWILNALQFWILDNVLMSEKVITDMHPGSFGKCA 696
            PP  SLPQ DAEGCHLISENYAYALQ ILGFAALAGLVFKRWRAPVKRDLVVWM+DVSKQGFG++FIH+WNI LSI+EG G PGSDECAMYFVNFSLDIAIGTFMIWCFVRVQE+TAVR GI SL+VTGDYGTPPLFSVYR QL AY VIL ICK+VTT IVIAMDEVLSSLAKALF+PVSA+PELELTLVMIICPWILNALQFWILDNVLMSEKV+ D   GSFGKC+
Sbjct:    6 PPYGSLPQGDAEGCHLISENYAYALQFILGFAALAGLVFKRWRAPVKRDLVVWMYDVSKQGFGAMFIHVWNILLSIHEGGGIPGSDECAMYFVNFSLDIAIGTFMIWCFVRVQELTAVRCGIDSLKVTGDYGTPPLFSVYRTQLLAYTVILVICKAVTTAIVIAMDEVLSSLAKALFSPVSAYPELELTLVMIICPWILNALQFWILDNVLMSEKVMLDPRSGSFGKCS 234
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BLAST of mRNA_P-lacustris_contig104.419.1 vs. uniprot
Match: A0A836CED2_9STRA (Vacuolar membrane protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CED2_9STRA)

HSP 1 Score: 206 bits (524), Expect = 1.570e-62
Identity = 102/210 (48.57%), Postives = 137/210 (65.24%), Query Frame = 1 
Query:   40 AEGCHLISENYAYALQLILGFAALAGLVFKRWRAPVKRDLVVWMFDVSKQGFGSLFIHMWNIFLSIYEGVGKPGS----------DECAMYFVNFSLDIAIGTFMIWCFVRVQEITAVRFGIGSLQVTGDYGTPPLFSVYRAQLAAYMVILGICKSVTTFIVIAMDEVLSSLAKALFAPVSAFPELELTLVMIICPWILNALQFWILDNV 639
            A+ CHLI   +A  LQ +LG AAL GL+ KR     +R  +VW +DVSKQG+ +L +H WNIF+S+   V   G           DECA+YFV F+LD+ +G  ++W  +R QE  A R+   SL ++GDYG PP F  + AQ+  YM+ +   K+V T +V+A D VLS ++  LFAPV  FPE ELT+VMIICPWILNALQFW++DN+
Sbjct:    4 AKTCHLIGGAFANVLQFVLGLAALVGLLVKRQGERPRRPFIVWWYDVSKQGYAALLVHAWNIFMSMALAVRTRGDAAGLGVAAPRDECALYFVQFALDVLLGVALVWVLIRTQERLARRYNWPSLAISGDYGNPPRFQWFVAQMGVYMLSVVAVKTVITLVVLAGDAVLSDVSAVLFAPVREFPEAELTIVMIICPWILNALQFWMMDNM 213
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BLAST of mRNA_P-lacustris_contig104.419.1 vs. uniprot
Match: A0A835YS54_9STRA (Vacuolar membrane protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YS54_9STRA)

HSP 1 Score: 206 bits (524), Expect = 2.610e-61
Identity = 124/305 (40.66%), Postives = 173/305 (56.72%), Query Frame = 1 
Query:   25 LPQEDAEGCHLISENYAYALQLILGFAALAGLVFKRWRAPVKRDLVVWMFDVSKQGFGSLFIHMWNIFLS-IYEGVGKPGS------DECAMYFVNFSLDIAIGTFMIWCFVRVQEITAVRFGIGSLQVTGDYGTPPLFSVYRAQLAAYMVILGICKSVTTFIVIAMDEVLSSLAKALFAPVSAFPELELTLVMIICPWILNALQFWILDNVLMSEKVITDMHPGSFGKCADDGDEALMPLVYGSTSRYENMADTMDPADGRGGGGSGNLEISGQDALEREGLNTPTATELPREPSWMSE-PVSG 915
            +PQ++AE C LI   YA  LQ +LG AAL GL+             VW++DVSKQG+G+LF+H WNI +S I   + +  +      D CA+YFV F LD+ +G  MIW  VR QE  A R  + SL V+GDYG PP    +  QL AYM+ L I K++ + +V+A D +LS L+  LF+PV+  P++ELT+VMI+CPWILNALQFWI+DN++     +++  P ++G   + G E L P    + +      D +     R G   G+ +                  +LPREPSWMS  P SG
Sbjct:    1 MPQQEAERCRLIGGTYANVLQFVLGIAALTGLL-------------VWIYDVSKQGYGALFVHFWNIVMSMILADLSRRANADAVERDACALYFVQFVLDMMLGMVMIWAMVRTQEWLAERCNVPSLAVSGDYGNPPKVQWFWHQLGAYMMSLLIIKTIISTVVVAEDRILSRLSTWLFSPVAKHPDVELTIVMIVCPWILNALQFWIMDNMVS----MSNRQP-NYGYLPNTGGETLTP-TQPAHAELGPSGDALGGTFSRAGDARGDFK------------------DLPREPSWMSSRPRSG 268
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BLAST of mRNA_P-lacustris_contig104.419.1 vs. uniprot
Match: A0A836CKC4_9STRA (Vacuolar membrane protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKC4_9STRA)

HSP 1 Score: 196 bits (499), Expect = 1.550e-58
Identity = 99/204 (48.53%), Postives = 138/204 (67.65%), Query Frame = 1 
Query:   49 CHLISENYAYALQLILGFAALAGLVFKRWRAPVKRDLVVWMFDVSKQGFGSLFIHMWNIFLSIY-----EGVGKPGSDECAMYFVNFSLDIAIGTFMIWCFVRVQEITAVRFGIGSLQVTGDYGTPPLFSVYRAQLAAYMVILGICKSVTTFIVIAMDEVLSSLAKALFAPVSAFPELELTLVMIICPWILNALQFWILDNVLM 645
            C L+   ++  LQ +LGFAAL+ LV+KR     +R ++VW++D SKQ  G+  +H WN+ LSI         G   SDECA+YFVN+++DI +GT +IW  V+ Q   A R G+GSL+ TG YG PP  SVY AQL A+M IL I K+   F+VIA+D  +  +A+ LF P+  +P+LEL +VMI+CPW LN++QFWILD+V+M
Sbjct:   11 CELLGGAFSIILQGLLGFAALSTLVYKRLLENPRRPILVWLYDTSKQAIGAGLVHAWNMALSIAIAKLRRDQGDDASDECALYFVNYAVDILLGTGLIWGLVQAQVTMAKRLGVGSLRHTGFYGDPPRLSVYLAQLLAFMFILVIQKTALAFLVIALDGQIEVMAEFLFLPLQGYPDLELLIVMILCPWCLNSVQFWILDSVVM 214
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BLAST of mRNA_P-lacustris_contig104.419.1 vs. uniprot
Match: A0A2D4BU66_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BU66_PYTIN)

HSP 1 Score: 167 bits (422), Expect = 3.390e-46
Identity = 89/231 (38.53%), Postives = 135/231 (58.44%), Query Frame = 1 
Query:   43 EGCHLISENYAYALQLILGFAALAGLVFKRWRAPVKRDLVVWMFDVSKQGFGSLFIHMWNIFLSI----YE---GVGKPGSDECAMYFVNFSLDIAIGTFMIWCFVRVQEITAVRFGIGSLQVTGDYGTPPLFSVYRAQLAAYMVILGICKSVTTFIVIAMDEVLSSLAKALFAPVSAFPELELTLVMIICPWILNALQFWILDNVLMSE--------KVITDMHPGSFGK 690
            E C L+S  +A  LQ++LG  AL+ LV KR+    +R + +W FD SKQ  G+ F H+ N+ ++I    YE   G G  G D+CA YFVNF++D  +G    W F+ +    AVRF   SL   GDYG P   S++  QL +++ I+ + K V   +++A+++ L  LA  LFAP+  +P +EL +VMI+CP ++NALQFW+ D+ L  +          ++   PG+F K
Sbjct:   13 EECKLLSGGFATFLQVLLGIIALSVLVVKRYHEVPRRPVTIWAFDASKQMIGAGFAHVANLLIAIMLYQYEHGHGSGTTGVDQCAFYFVNFTMDTTVGVLFNWMFLEMVSSLAVRFQFTSLTTPGDYGDPIQVSIWLKQLVSWIFIIFLTKLVIALVIVALEKPLGDLAMWLFAPLQPYPNVELAIVMILCPCLMNALQFWVQDSFLKKDVRADCVLASTLSPDKPGAFEK 243
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BLAST of mRNA_P-lacustris_contig104.419.1 vs. uniprot
Match: W2PXY3_PHYPN (Uncharacterized protein n=15 Tax=Phytophthora TaxID=4783 RepID=W2PXY3_PHYPN)

HSP 1 Score: 164 bits (416), Expect = 2.440e-45
Identity = 85/215 (39.53%), Postives = 132/215 (61.40%), Query Frame = 1 
Query:   34 EDAEG--CHLISENYAYALQLILGFAALAGLVFKRWRAPVKRDLVVWMFDVSKQGFGSLFIHMWNIFLSI--YEGVGKPGSDE-----CAMYFVNFSLDIAIGTFMIWCFVRVQEITAVRFGIGSLQVTGDYGTPPLFSVYRAQLAAYMVILGICKSVTTFIVIAMDEVLSSLAKALFAPVSAFPELELTLVMIICPWILNALQFWILDNVLMSE 651
            ED E   C L+S ++A  LQ++LGF A++ L FKRWR   +R L+VW FD SKQ  G+ F H+ N+ ++I  Y    +  SDE     CA+YFVNF+LD  +G F+ +  +    + A+RF   SL+  GDYGTP     +  Q+ ++++++  CK +   +++A  + L + A  LF P+  +P++EL +VMI CP ++NALQFW+ DN L  +
Sbjct:    8 EDGEEKECKLLSGDFAVLLQVLLGFIAISVLAFKRWREVPRRPLMVWAFDASKQMVGATFAHVANLLIAIVLYSYQEELESDEEPVDQCALYFVNFTLDTTLGVFLNYVLLSAVVLLALRFSWSSLKTPGDYGTPVRVRTWILQVISWIIVIFTCKFLIAVLIVAFQKPLGAFAVLLFKPLEEYPDVELAIVMIACPCLMNALQFWVQDNFLKKD 222
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BLAST of mRNA_P-lacustris_contig104.419.1 vs. uniprot
Match: K3WV98_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WV98_GLOUD)

HSP 1 Score: 162 bits (411), Expect = 1.120e-44
Identity = 87/213 (40.85%), Postives = 126/213 (59.15%), Query Frame = 1 
Query:   31 QEDAEGCHLISENYAYALQLILGFAALAGLVFKRWRAPVKRDLVVWMFDVSKQGFGSLFIHMWNIFLSIY------EGVGKPGSDECAMYFVNFSLDIAIGTFMIWCFVRVQEITAVRFGIGSLQVTGDYGTPPLFSVYRAQLAAYMVILGICKSVTTFIVIAMDEVLSSLAKALFAPVSAFPELELTLVMIICPWILNALQFWILDNVLMSE 651
            +EDA  C L+S  +A  +Q++LG  A + L+ KR R   +R L VW FD SKQ  G+ F H+ N+ ++I       E     G D+CA YFVNF++D   G F+ W F+    + A RF   S+ V GDYG P    V+ AQL +++VI+ + K V    ++A+++ L  LA  +F P+  +P LEL LVMI CP ++NALQFWI D+ L  +
Sbjct:   16 KEDAGECKLLSGGFAALMQIVLGLIAFSVLIVKRLREVPQRPLAVWAFDASKQMVGAGFAHVANLLIAILLYNHQMEAQVMKGVDQCAFYFVNFTMDTTFGVFLNWAFLEGFSMLARRFQWTSVMVPGDYGNPIRVRVWLAQLISWIVIIFLTKLVIAVFIVALEKPLGELAMWVFTPLQPYPHLELALVMIACPCLMNALQFWIQDSFLKKD 228
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BLAST of mRNA_P-lacustris_contig104.419.1 vs. uniprot
Match: D0N4K7_PHYIT (Uncharacterized protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0N4K7_PHYIT)

HSP 1 Score: 161 bits (407), Expect = 4.640e-44
Identity = 83/218 (38.07%), Postives = 133/218 (61.01%), Query Frame = 1 
Query:   19 DSLPQEDAEGCHLISENYAYALQLILGFAALAGLVFKRWRAPVKRDLVVWMFDVSKQGFGSLFIHMWNIFLSI----YEGV---GKPGSDECAMYFVNFSLDIAIGTFMIWCFVRVQEITAVRFGIGSLQVTGDYGTPPLFSVYRAQLAAYMVILGICKSVTTFIVIAMDEVLSSLAKALFAPVSAFPELELTLVMIICPWILNALQFWILDNVLMSE 651
            DS P+E    C L+S ++A  LQ++LGF A++ L  KR R   +R L +W FD SKQ  G+ F H+ N+F++I    Y+     G+   D+CA+YFVNF+LD  +G F+ +  +    + A+RF   SL+  GDYGTP     +  Q+ ++++++  CK +   +++A  + L + A  LF P++  P++EL +VMI CP ++NALQFW+ DN L  +
Sbjct:    6 DSKPKE----CELLSGDFAVLLQVLLGFIAISVLAIKRLREVPQRPLTIWAFDASKQMVGATFAHVANLFIAIVLFNYQKEMESGEESVDQCALYFVNFTLDTTLGVFLNYVLLSAVVLLALRFSWSSLKTPGDYGTPVRVRTWILQVLSWILVIFTCKFLIALLIVAFQKPLGAFAVLLFKPLADHPDVELAIVMIACPCLMNALQFWVQDNFLKKD 219
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BLAST of mRNA_P-lacustris_contig104.419.1 vs. uniprot
Match: A0A6A3LBI9_9STRA (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3LBI9_9STRA)

HSP 1 Score: 160 bits (405), Expect = 1.050e-43
Identity = 82/218 (37.61%), Postives = 129/218 (59.17%), Query Frame = 1 
Query:   19 DSLPQEDAEGCHLISENYAYALQLILGFAALAGLVFKRWRAPVKRDLVVWMFDVSKQGFGSLFIHMWNIFLSIY-------EGVGKPGSDECAMYFVNFSLDIAIGTFMIWCFVRVQEITAVRFGIGSLQVTGDYGTPPLFSVYRAQLAAYMVILGICKSVTTFIVIAMDEVLSSLAKALFAPVSAFPELELTLVMIICPWILNALQFWILDNVLMSE 651
            D     +++ C L+S  +A ALQ++LGF A++ LV KR     +R L+VW FD SKQ  G+ F H+ N+ ++I        +   +   D+CA+YFVNF+LD  +G F+ +  +    + A RFG  SL+  GDYG P     +  Q+ +++V++  CK +   +++A ++ L + A  LF P+   PE+EL LVMI CP ++NALQFW+ DN L  +
Sbjct:    6 DGSEDGNSDECKLLSGTFAVALQILLGFIAMSVLVLKRLHEVPRRPLMVWAFDASKQMIGATFAHVANLLIAIMLYSYQQEQRTDEEAVDQCALYFVNFTLDTTLGVFLNYVLLSAVVLLAHRFGWTSLKTPGDYGIPIRVRTWLLQVISWIVVIFTCKFLIASLIVAFEKPLGAFAVLLFKPLEKHPEVELALVMIACPCLMNALQFWVQDNFLKKD 223
[Close]
BLAST of mRNA_P-lacustris_contig104.419.1 vs. uniprot
Match: H3HD54_PHYRM (Phosphatidylinositol-3,5-bisphosphate 3-phosphatase n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3HD54_PHYRM)

HSP 1 Score: 169 bits (429), Expect = 1.410e-43
Identity = 89/237 (37.55%), Postives = 141/237 (59.49%), Query Frame = 1 
Query:   31 QEDAEGCHLISENYAYALQLILGFAALAGLVFKRWRAPVKRDLVVWMFDVSKQGFGSLFIHMWNIFLSI----YEG---VGKPGSDECAMYFVNFSLDIAIGTFMIWCFVRVQEITAVRFGIGSLQVTGDYGTPPLFSVYRAQLAAYMVILGICKSVTTFIVIAMDEVLSSLAKALFAPVSAFPELELTLVMIICPWILNALQFWILDNVLMSEK-----VITDMHPGSFGKCADDG 705
            +++ E C L+S N+A  LQ++LG  A++ LV KR R   +R L+VW FD SKQ  G+ F H+ N+ ++I    Y+      +  +D+CA+YFVNF+LD  +G F+ +  +    + A+RFG  SL+  GDYGTP     +  Q+ ++++++ +CK +   +++A ++ L S A  LF P+   PE+EL LVMI CP ++NALQFW+ DN L  +      V+T       G   +DG
Sbjct: 1049 EDNPEECKLLSGNFAALLQVLLGLIAMSVLVVKRLREVPRRPLMVWAFDASKQMIGATFAHVVNLLIAITLYSYQAQRQTDEEAADQCALYFVNFTLDTTLGVFLNYVLLSAVVLLALRFGWSSLKTPGDYGTPVRVRTWVLQVISWIIVIFLCKFLIASLIVAFEKPLGSFAVLLFKPLEKHPEVELALVMIACPCLMNALQFWVQDNFLKKDVRDESFVVTQATQSPAGSLDEDG 1285
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig104.419.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G3K9_ECTSI1.600e-13886.90Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CED2_9STRA1.570e-6248.57Vacuolar membrane protein-domain-containing protei... [more]
A0A835YS54_9STRA2.610e-6140.66Vacuolar membrane protein-domain-containing protei... [more]
A0A836CKC4_9STRA1.550e-5848.53Vacuolar membrane protein-domain-containing protei... [more]
A0A2D4BU66_PYTIN3.390e-4638.53Uncharacterized protein n=1 Tax=Pythium insidiosum... [more]
W2PXY3_PHYPN2.440e-4539.53Uncharacterized protein n=15 Tax=Phytophthora TaxI... [more]
K3WV98_GLOUD1.120e-4440.85Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
D0N4K7_PHYIT4.640e-4438.07Uncharacterized protein n=2 Tax=Phytophthora infes... [more]
A0A6A3LBI9_9STRA1.050e-4337.61Uncharacterized protein n=4 Tax=Phytophthora TaxID... [more]
H3HD54_PHYRM1.410e-4337.55Phosphatidylinositol-3,5-bisphosphate 3-phosphatas... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig104contigP-lacustris_contig104:187723..192631 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score403.3
Seed ortholog evalue1e-109
Seed eggNOG ortholog2880.D7G3K9
Preferred nameTMEM110
Hectar predicted targeting categoryother localisation
GOsGO:0000322,GO:0000323,GO:0000324,GO:0000329,GO:0003674,GO:0005246,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005773,GO:0005774,GO:0005783,GO:0005789,GO:0005938,GO:0007154,GO:0007165,GO:0008150,GO:0009966,GO:0009967,GO:0009987,GO:0010646,GO:0010647,GO:0010959,GO:0012505,GO:0016020,GO:0016021,GO:0016247,GO:0019722,GO:0019932,GO:0022898,GO:0023051,GO:0023052,GO:0023056,GO:0031090,GO:0031224,GO:0031984,GO:0032237,GO:0032409,GO:0032411,GO:0032412,GO:0032414,GO:0032541,GO:0032879,GO:0034762,GO:0034764,GO:0034765,GO:0034767,GO:0035556,GO:0035584,GO:0042175,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043269,GO:0043270,GO:0044093,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044437,GO:0044444,GO:0044446,GO:0044448,GO:0044464,GO:0048518,GO:0048522,GO:0048583,GO:0048584,GO:0050789,GO:0050794,GO:0050848,GO:0050850,GO:0050896,GO:0051049,GO:0051050,GO:0051716,GO:0051924,GO:0051928,GO:0065007,GO:0065009,GO:0070884,GO:0070886,GO:0071782,GO:0071944,GO:0098588,GO:0098772,GO:0098805,GO:0098827,GO:0098852,GO:0099106,GO:0099568,GO:0106056,GO:0106058,GO:1901019,GO:1901021,GO:1901339,GO:1901341,GO:1902531,GO:1902533,GO:1903169,GO:1904062,GO:1904064,GO:1904427,GO:2001257,GO:2001259
EggNOG free text desc.activation of store-operated calcium channel activity
EggNOG OGs2BJXQ@1,2S1HE@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons6
Model size930
Cds size930
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig104.419.1prot_P-lacustris_contig104.419.1Pleurocladia lacustris SAG_25_93polypeptideP-lacustris_contig104 187723..192631 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815311.3971267-CDS-P-lacustris_contig104:187722..1878451622815311.3971267-CDS-P-lacustris_contig104:187722..187845Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig104 187723..187845 +
1693493467.6355507-CDS-P-lacustris_contig104:187722..1878451693493467.6355507-CDS-P-lacustris_contig104:187722..187845Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig104 187723..187845 +
1622815311.4111807-CDS-P-lacustris_contig104:190067..1901871622815311.4111807-CDS-P-lacustris_contig104:190067..190187Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig104 190068..190187 +
1693493467.6609256-CDS-P-lacustris_contig104:190067..1901871693493467.6609256-CDS-P-lacustris_contig104:190067..190187Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig104 190068..190187 +
1622815311.4199328-CDS-P-lacustris_contig104:190434..1905781622815311.4199328-CDS-P-lacustris_contig104:190434..190578Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig104 190435..190578 +
1693493467.711374-CDS-P-lacustris_contig104:190434..1905781693493467.711374-CDS-P-lacustris_contig104:190434..190578Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig104 190435..190578 +
1622815311.4286535-CDS-P-lacustris_contig104:190916..1911281622815311.4286535-CDS-P-lacustris_contig104:190916..191128Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig104 190917..191128 +
1693493467.7202096-CDS-P-lacustris_contig104:190916..1911281693493467.7202096-CDS-P-lacustris_contig104:190916..191128Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig104 190917..191128 +
1622815311.4382622-CDS-P-lacustris_contig104:191488..1915781622815311.4382622-CDS-P-lacustris_contig104:191488..191578Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig104 191489..191578 +
1693493467.7395685-CDS-P-lacustris_contig104:191488..1915781693493467.7395685-CDS-P-lacustris_contig104:191488..191578Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig104 191489..191578 +
1622815311.4472172-CDS-P-lacustris_contig104:192390..1926311622815311.4472172-CDS-P-lacustris_contig104:192390..192631Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig104 192391..192631 +
1693493467.7495372-CDS-P-lacustris_contig104:192390..1926311693493467.7495372-CDS-P-lacustris_contig104:192390..192631Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig104 192391..192631 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-lacustris_contig104.419.1

>prot_P-lacustris_contig104.419.1 ID=prot_P-lacustris_contig104.419.1|Name=mRNA_P-lacustris_contig104.419.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=310bp
MPPPPSDSLPQEDAEGCHLISENYAYALQLILGFAALAGLVFKRWRAPVK
RDLVVWMFDVSKQGFGSLFIHMWNIFLSIYEGVGKPGSDECAMYFVNFSL
DIAIGTFMIWCFVRVQEITAVRFGIGSLQVTGDYGTPPLFSVYRAQLAAY
MVILGICKSVTTFIVIAMDEVLSSLAKALFAPVSAFPELELTLVMIICPW
ILNALQFWILDNVLMSEKVITDMHPGSFGKCADDGDEALMPLVYGSTSRY
ENMADTMDPADGRGGGGSGNLEISGQDALEREGLNTPTATELPREPSWMS
EPVSGDGGWG
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mRNA from alignment at P-lacustris_contig104:187723..192631+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-lacustris_contig104.419.1 ID=mRNA_P-lacustris_contig104.419.1|Name=mRNA_P-lacustris_contig104.419.1|organism=Pleurocladia lacustris SAG_25_93|type=mRNA|length=4909bp|location=Sequence derived from alignment at P-lacustris_contig104:187723..192631+ (Pleurocladia lacustris SAG_25_93)
ATGCCTCCGCCGCCTTCTGACTCGCTGCCACAAGAGGATGCAGAAGGCTG
CCACTTGATCTCGGAAAACTATGCCTATGCACTGCAGCTCATTCTTGGAT
TCGCTGCGTTAGCGGGATTAGTGGTGAGTCCCACAGGCACCTTCTCCGTT
CGTCTGTTTTTTTCGAGACCCCAATAGGTTTTGGGTGATGATGTGATGAT
GCCTATTTGAGAGAGACTTTCGGGGCGTTAATTATAACGTGTCCCGCTCG
ATGTGGCTATGCCCCGAGGCGTGCCAGCAACGTTTCCACCATGATTTGTA
TGCAATGTAGAGCCGAAGGGCATGCAACACTACACTATGTTTTCAGAGGA
GAGGCACACCCCTGGTGGTGAAGATGATAATGACGGCGTTTGGTCTTGCC
TTGAACCACCGTCTCCTGATGGGGTCAATACTAACTGAGACCTTGACGTC
ACAACTACCGATGCCCAGTCCTGTTTGCTCTCAATGTCGGAGGCACCGAC
TCATGAGTGGTGCCCTTATGTGAGCGTGTCTATCGGCGGACGCACCGCAC
AACCACTGGGCGCGGTGTTTTTTTTTCAAGATATCTCTTCGAAATTGCTT
TCACGGGCGTTTGTGTTGAGTATTGAGAAGCGGGCAAGCCGCGGCAGCCA
GCAAATCGCCGCTTCAAATTCCTACCGGCATCGCGATGTATGTGTGTGTG
TGCGTGAAAGTTGAAAAAAATGCTTGGTGAAGGCACATTTAATTGACGGA
CCATAAGAACTTCTTAGGATGGCAGTCTTCCTATGATAAGATGTTTTGTG
TTTTTTTTAAATGACGGGAACGGTACAACCAAGCATGTGTTTTTTTCGCA
CTAAACTGCTTTGTCAACATTCCAACGACCGCCAGTCGTAGCGGGACAGA
AAAACACTACTGCTGTACAACGCGTTCATTCTAACAAAACCGCGGGCTCA
CCTGTCGTGTCTGTCGTGGGGCGCGCGGAGGAGACGGAGACTGGCGAGGA
CGGTCCAGCCTCCGGATTGAATGAACTTTAAACTTCAAGCGAGGACAACA
CAACACCACTCCAAAAGCATCCTCCTTTTCCTACAGCAGTATGCATACAC
CTCGCGACGTTTTTTGTGTGTGTTTTTTTTTTGCACCCTGCAATACGCGG
TTTTTCGCCCATTGCAAAAAGGGTTTTGACATCCCCAGTCTGACTGGGGG
GTGCCAGACTGGGGGGTGCGAAAACTCTTTTTGCAGGGGTGAAAAAACGT
TCTGCAGGGGTACAAAAACCCGCCTTTTGATTATACTGCCATTAACACCG
ATCATCGCAACCATGGACTTGCACTGATGAGAGCAAAACTAGCTCTAGCT
TGCTGCTCCGTTTATAATGGCAAACCGTTTCGAAATGGGTGAGCAGGGGG
CGTATTGTTGTTCCCATGAACGAACAAATCCAAAACTACCATGGTCCTTT
GCAACCCCCTGACCCCATTTCCAAGTTGTTTTCTTTTTTGGCGAAATTGT
TTGAACAAACATGAGCATTAAAGCAGTTCGGCGTAAACGTTGAACACATG
GTCGACGCACCCACACACGGAGGAATGCTCAGTTTTAGTGGCGACGTGTC
GTAGTCTTGTCTCACCTAGTCTGAATCCGGATGCCGGATCTTTCTTCCCG
GTCTCCTCCATACCCCCGTTGCCGGGGGACCCCGCGGATTAGAACCTTAC
TTCACTTTCAGTCCGGCAAGAACTCAGGTATTTTCGTTGGTCTATCGTTG
AACGCGGTCGATGCTGTTTGAGAGAGAAACATAACATAAGCACATACATT
TATGCGCACAATGAAAGTCTTCCGCTGAGGCGGCACAACCAGTTACTTGT
CTTGTTGGCGTCGTCCGCGACAGATACTGTCGATCGACGGCTGCGAGGGT
AAGGGTGTCAATGCCAGCATCGACAACATCGACAAAACTGAACCCACGTG
GGTGAAGATTCTCGGAAGATGGCCTAGTTGTCGGATGACAAACCTAGCCT
ACATGGGTTCGCTTTTGGTGTCCATCCTATTTCTCGAGAACTTTGCGCGG
CCGGGAAACGATGGCAACTCTGCGCGATGTAGACGAGCCTGGCGGGCGGC
TTTACTTTTGACGCTGTTTGTGGTATCTGCGATATCTGCGGCAGTGTGCG
GGGCACTCCATGCCTGATGGCGCCACTAGTTAACCCTGCCCCAATTTTCC
CTCACCACGCCACCGCTGCCTTGTTATGCCCAACCCCGCTGTTTCCTTGA
CGTGGGCGATGATGCCGTCGTAAACGGCCAATCAACCCCCTTACTGGCGG
TGGCTTGGGAATCGTATCGGCGGGATTGCTTCCGATACTGTGCAGTTCAA
GCGATGGCGGGCGCCGGTGAAGCGCGACCTGGTGGTATGGATGTTCGATG
TGTCGAAGCAGGGCTTCGGTTCACTCTTTATCCACATGTGGAATATTTTC
CTCTCGATATACGAGGTGAGGCGAAATCAACTTATCCATCCCTGACGTTG
CCGCAGTAGGTGGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTTGCGG
TGATGGTCGTGTGTTACCACAGGTGTGGTTCTGGTGCTGGTGCTGGCGCT
TTCGTGTGTTGTCACCGCGTGTGTTGTCCATCCATGCATGTCCGCGGGTT
GTTACAGGTGTGTCCGCGAAACCTTAAACCGTTACATTGTCCCCACCCTT
GAACTGCCGCAGGGCGTAGGTAAACCCGGGTCGGACGAGTGCGCCATGTA
CTTCGTGAATTTCTCCCTGGACATCGCCATCGGAACGTTCATGATCTGGT
GCTTCGTACGGGTCCAGGAGATTACCGCCGTGCGGTTCGGGATCGGTAGC
CTCCAGGTAATTCAAGAGTCATGACACCCCCGGAAACCGAGACAACTATT
GAACCGAACCACACTGCCACGCTGCGGCGGGTACTTGTGCGGTTCAATGC
TCTCGTAGCGATGATGATCAACATCAATAACAAGAAGGCGGCAGTAGTAG
AAGCTCGTTGCGAATTTTTATCAGATTTGCTTGAACTATGTGTGCGCTGT
ACGCGATGCTGCTCCGCGCATAGATGCAGCCCACCGTTCATGCGCTACCC
ATGCGCTATTGTACCGTGCTTAGACACAACCACGTTCAGTTGCGACGCTC
TGAGCTACTCCTGTGTTTTGCTCGTGTATCTCGCATACATAAAGGTTACA
GGGGACTACGGGACCCCACCATTGTTTTCGGTCTACCGGGCGCAGCTGGC
TGCGTACATGGTCATCCTGGGTATCTGCAAATCGGTAACGACCTTCATCG
TGATCGCTATGGACGAGGTGCTCTCGTCTTTGGCGAAGGCTCTCTTCGCA
CCTGTTAGTGCCTTTCCGGAGCTGGAGCTCACGCTCGTCATGATCATCTG
TCCATGGTGACCTGGCCGCTATTTTATTTTTCGTGTGTTTTCGTCCTCGG
GGGTATGCATAGCTGTTGTCGTCGTAGCTGCTTTGGGAGGCCAAGTGGTT
GTGGTAGTGAGAGGCGTCGCTGCTGCTGCCGCCGCTGCCGCCGCTGCTGC
TGGTGTCAGAGTTCGCTTCTTTCGATCGGCTACTTCTCCGTTCATTTTCA
GCGCGTCTTGCTAGATTCCCACACGATCCTGACTGCAGAGGGAGATGGCA
GCTAGTGATGTTCATTCATGGCAATGGCCGTATTGTTAACGTCGAATTCA
AATCGCATACGACGTGACGTTTCTCTCCAATGCCCTATCATACCGTCTGT
CCTCGCCTGGTTCCAGGATCCTAAACGCGTTGCAATTCTGGATATTGGAC
AACGTGCTCATGTCGGAGAAGGTTATCACGGACATGCATCCAGGATCCTT
CGGAAAGTGAGAGTCACGCCGCCAGTACAGTACAGTAGTACAGCAGCAAG
ACAAACTAAGACAAACTAATTGTAATGCACGCCTCGTCGTTGGTTTTGAT
TGGATCAGCCCAGCCCCGGAATGACATACATCATATGCAATGCGACGAGC
GCAGCAGCATCACTTGCGACATGATGTTGCTCGCATCGAGTGCGAGCTCA
GCCCGATTCTTGGTCGAAACGAGGGAACGAGAGCGTCGTACGACATGACA
GCGGCAAACGGGGAGGTGTTGACACGGGTTTTTTTGGGTGTCCGATCCGT
AGGAGTGTGTGTGTCTTGGTGAGTCCTGTGGTGGGGGGTTTCGATTTTGT
TTGAGTGTCTTTTGCGGGATGGAGGTAAGAATTTTTTAAGCCGAGTTTGT
GAGTGAGATGCCCTGGTTTTGTCTTTTGTCGTCAGATAGAGTGCTTATCG
TCACAGAGTGACTGCCACAATGGGTGTCGTCCTGGCGGGTGGGAGTTGAA
TGGAACTAACGACCCTCTAGACCAATCGCGAAAGAGAGAGAGAGAAATAC
AAGTAGGCGTTTTGGCTTCGGGAGGGGGAAACACTCACACTCACACTCAC
CCGGCGCCAAAACTAACCAGAGAAATACAAGTAGGCGTTTTGGCTTCGGG
AGGGGGAAACACTCACACTCACACTCACCCGGCGCCAAAACCAACGGTTA
GGAGAGGGCGTTGTTGTCGTTGTTGGATGTTCATGAAAATATCGATCGGC
TCGCTTATTTGTTTGCACCATACCACACCACACCATCCTATACCATCCCA
CGCTGCGCCATACCGCAGATGCGCCGATGATGGTGACGAAGCACTAATGC
CACTGGTATACGGCTCAACGAGCAGATATGAAAACATGGCGGACACGATG
GACCCTGCGGACGGTCGGGGCGGTGGGGGCAGCGGCAATCTCGAGATTTC
CGGCCAAGATGCGTTGGAGAGGGAAGGCTTGAACACGCCCACGGCTACGG
AGCTTCCTAgGGAACCTTCGTGGATGTCGGAGCCGGTTTCCGGGGATGGG
GGGTGGGGA
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Coding sequence (CDS) from alignment at P-lacustris_contig104:187723..192631+

>mRNA_P-lacustris_contig104.419.1 ID=mRNA_P-lacustris_contig104.419.1|Name=mRNA_P-lacustris_contig104.419.1|organism=Pleurocladia lacustris SAG_25_93|type=CDS|length=1860bp|location=Sequence derived from alignment at P-lacustris_contig104:187723..192631+ (Pleurocladia lacustris SAG_25_93)
ATGCCTCCGCCGCCTTCTGACTCGCTGCCACAAGAGGATGCAGAAGGCTG
CCACTTGATCTCGGAAAACTATGCCTATGCACTGCAGCTCATTCTTGGAT
TCGCTGCGTTAGCGGGATTAGTGATGCCTCCGCCGCCTTCTGACTCGCTG
CCACAAGAGGATGCAGAAGGCTGCCACTTGATCTCGGAAAACTATGCCTA
TGCACTGCAGCTCATTCTTGGATTCGCTGCGTTAGCGGGATTAGTGTTCA
AGCGATGGCGGGCGCCGGTGAAGCGCGACCTGGTGGTATGGATGTTCGAT
GTGTCGAAGCAGGGCTTCGGTTCACTCTTTATCCACATGTGGAATATTTT
CCTCTCGATATACGAGTTCAAGCGATGGCGGGCGCCGGTGAAGCGCGACC
TGGTGGTATGGATGTTCGATGTGTCGAAGCAGGGCTTCGGTTCACTCTTT
ATCCACATGTGGAATATTTTCCTCTCGATATACGAGGGCGTAGGTAAACC
CGGGTCGGACGAGTGCGCCATGTACTTCGTGAATTTCTCCCTGGACATCG
CCATCGGAACGTTCATGATCTGGTGCTTCGTACGGGTCCAGGAGATTACC
GCCGTGCGGTTCGGGATCGGTAGCCTCCAGGGCGTAGGTAAACCCGGGTC
GGACGAGTGCGCCATGTACTTCGTGAATTTCTCCCTGGACATCGCCATCG
GAACGTTCATGATCTGGTGCTTCGTACGGGTCCAGGAGATTACCGCCGTG
CGGTTCGGGATCGGTAGCCTCCAGGTTACAGGGGACTACGGGACCCCACC
ATTGTTTTCGGTCTACCGGGCGCAGCTGGCTGCGTACATGGTCATCCTGG
GTATCTGCAAATCGGTAACGACCTTCATCGTGATCGCTATGGACGAGGTG
CTCTCGTCTTTGGCGAAGGCTCTCTTCGCACCTGTTAGTGCCTTTCCGGA
GCTGGAGCTCACGCTCGTCATGATCATCTGTCCATGGTTACAGGGGACTA
CGGGACCCCACCATTGTTTTCGGTCTACCGGGCGCAGCTGGCTGCGTACA
TGGTCATCCTGGGTATCTGCAAATCGGTAACGACCTTCATCGTGATCGCT
ATGGACGAGGTGCTCTCGTCTTTGGCGAAGGCTCTCTTCGCACCTGTTAG
TGCCTTTCCGGAGCTGGAGCTCACGCTCGTCATGATCATCTGTCCATGGA
TCCTAAACGCGTTGCAATTCTGGATATTGGACAACGTGCTCATGTCGGAG
AAGGTTATCACGGACATGCATCCAGGATCCTTCGGAAAGATCCTAAACGC
GTTGCAATTCTGGATATTGGACAACGTGCTCATGTCGGAGAAGGTTATCA
CGGACATGCATCCAGGATCCTTCGGAAAATGCGCCGATGATGGTGACGAA
GCACTAATGCCACTGGTATACGGCTCAACGAGCAGATATGAAAACATGGC
GGACACGATGGACCCTGCGGACGGTCGGGGCGGTGGGGGCAGCGGCAATC
TCGAGATTTCCGGCCAAGATGCGTTGGAGAGGGAAGGCTTGAACACGCCC
ACGGCTACGGAGCTTCCTAgGGAACCTTCGTGGATGTCGGAGCCGGTTTC
CGGGGATGGGGGGTGGGGAATGCGCCGATGATGGTGACGAAGCACTAATG
CCACTGGTATACGGCTCAACGAGCAGATATGAAAACATGGCGGACACGAT
GGACCCTGCGGACGGTCGGGGCGGTGGGGGCAGCGGCAATCTCGAGATTT
CCGGCCAAGATGCGTTGGAGAGGGAAGGCTTGAACACGCCCACGGCTACG
GAGCTTCCTAgGGAACCTTCGTGGATGTCGGAGCCGGTTTCCGGGGATGG
GGGGTGGGGA
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