mRNA_P-lacustris_contig104.415.1 (mRNA) Pleurocladia lacustris SAG_25_93
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Overview
Homology
BLAST of mRNA_P-lacustris_contig104.415.1 vs. uniprot
Match: D7G3K6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G3K6_ECTSI) HSP 1 Score: 439 bits (1128), Expect = 5.080e-148 Identity = 228/264 (86.36%), Postives = 244/264 (92.42%), Query Frame = 2
Query: 140 SSGGDSSAAAECSSA--MTDPFEPGHAVGVGLKAEIWKTKHPNLLILETIDDSPVLGLMSVVRNVETEGGAFLSAANRLMRQLLDFAEMGFPKDDEAVFATPARVMMQGVLPTDDVKVCAISLYLENEPCGVFDIELDGAFPSFERGCLRVRGLTRGSSRELPRDMWGKQVLLLAPVVGYAQPVLAALERLKLADVEDEDVTLVSVVISKDALEALTEEAEEMRVVCAAMDGETRGSDHQVVPGVGDFSRRYFEAKAIVEAGAA 925
S GG S++ A CSSA + DP+EPG AVGVG+KAE+WKTKHPNL ILETI+DSPVLGLMSVVRNVET+GGAFLSAANRLMRQLLDFA+MGFP DDEAVFATPARVMM GVLP DDV VCAISLYLENEPCGVFD+ELD AFPSFERG L+VR LTRGSSRELPRDM GKQ+LLLAPVVGYAQPVLAALERL+ A VEDE+VTLVSVVISKDALEALTEEAE+MRVVC+AMDGETRGSDHQVVPGVGDFSRRYFEAKAIVEA AA
Sbjct: 88 SFGGGSTSVAGCSSADGVDDPYEPGQAVGVGIKAEMWKTKHPNLTILETIEDSPVLGLMSVVRNVETDGGAFLSAANRLMRQLLDFADMGFPNDDEAVFATPARVMMAGVLPEDDVNVCAISLYLENEPCGVFDMELDAAFPSFERGSLQVRCLTRGSSRELPRDMQGKQILLLAPVVGYAQPVLAALERLEQAGVEDENVTLVSVVISKDALEALTEEAEDMRVVCSAMDGETRGSDHQVVPGVGDFSRRYFEAKAIVEAEAA 351
BLAST of mRNA_P-lacustris_contig104.415.1 vs. uniprot
Match: K3X231_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X231_GLOUD) HSP 1 Score: 117 bits (293), Expect = 1.100e-25 Identity = 78/243 (32.10%), Postives = 126/243 (51.85%), Query Frame = 2
Query: 197 FEPGHAVGVGLKAEIWKTKHPNLLILETIDDSPVLGLMSVVRNVETEGGAFLSAANRLMRQLLDFAEMGFPKDDEAVFATPARVMMQGVLPTDDVKVCAISLYLENEPCGVFDIELDGAFPSFER-GCLRVRGLTRGSSR----ELPRDMWGKQVLLLAPVVGYAQPVLAALERLKLADVEDEDVTLVSVVISKDALEALTEEAEEMRVVCAAMDGETRGSDHQVVPGVGDFSRRYFEAKAIV 910
+ G A+G G++ E+WK KH N+++L+ + LG+ + R+ E G F+ AN ++R +D A P D+EAV TP +GV+ DDVKV IS+ + E L+ P + G + V + +G + LP D+ G +VLLL P + + + + L+ V++E +T+V++V +A ++ + E R+V AA D TR + +VPG GDF RY A V
Sbjct: 33 YASGEALGRGVRLELWKAKHENVVVLDFESELIQLGITKI-RDYENAGAQFVHDANSVLRAAVDLALTELPNDEEAVVTTPRGHKCEGVVFEDDVKVVGISIAKKPEVQKGLQQVLETTLPFESKLGEIIVADVGKGDFKIVKASLPDDLDGHEVLLLCPDLAAIEQISKTIHLLRQQGVDEEKITVVTLVTCPEAADSFCQTFGEARLVTAAFDA-TRDKEGYIVPGFGDFEERYLGGAATV 273
BLAST of mRNA_P-lacustris_contig104.415.1 vs. uniprot
Match: A0A8K1CMT7_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CMT7_PYTOL) HSP 1 Score: 117 bits (292), Expect = 1.570e-25 Identity = 80/240 (33.33%), Postives = 126/240 (52.50%), Query Frame = 2
Query: 197 FEPGHAVGVGLKAEIWKTKHPNLLILETIDDSPVLGLMSVVRNVETEGGAFLSAANRLMRQLLDFAEMGFPKDDEAVFATPARVMMQGVLPTDDVKVCAISLYLENEPCGVFDIELDGAFPSFER--GCLRVRGLTRGSSR----ELPRDMWGKQVLLLAPVVGYAQPVLAALERLKLADVEDEDVTLVSVVISKDALEALTEEAEEMRVVCAAMDGETRGSDHQVVPGVGDFSRRYFEA 898
+ G A+G G++ E WK KH N+++L+ + LG M+ +R+ E EG F+ AN ++R +D A P D+EAV TP +GV+ DDVKVC I++ E L+G P FE G + + +G +R LP D+ G +VLLL P + + + L+ A VE+E +T+V++V +A + + + R+V A+ D R + +VPG+G F RY A
Sbjct: 34 YVSGEALGRGVRLEYWKAKHENVVVLDLESELIQLG-MTRIRDRENEGKRFIHDANSVLRAAIDLAITELPNDEEAVVVTPRGHKAEGVVFEDDVKVCGIAVGSNVEVQKSLLSVLEGTLP-FESALGDVLIAETAKGDARVVKANLPEDLDGYEVLLLVPDFNALEKISKTIHLLRQAGVEEEKLTVVTLVTCPEAADKFCQTFGDARLVTASFDA-ARDGEGFIVPGIGAFEDRYLGA 270
BLAST of mRNA_P-lacustris_contig104.415.1 vs. uniprot
Match: A0A3F2RDY9_9STRA (Ubiquitin thioesterase OTU1 n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RDY9_9STRA) HSP 1 Score: 115 bits (289), Expect = 1.010e-23 Identity = 83/242 (34.30%), Postives = 128/242 (52.89%), Query Frame = 2
Query: 206 GHAVGVGLKAEIWKTKHPNLLILETIDDSPVLGLMSVVRNVETEGGAFLSAANRLMRQLLDFAEMGFPKDDEAVFATPARVMMQGVLPTDDVKVCAISLYLENEPCGVFDIELDGAFPSFER-GCLRVRGLTRGSSR----ELPRDMWGKQVLLLAPVVGYAQPVLAALERLKLADVEDEDVTLVSVVISKDALEALTEEAEEMRVVCAAMDGETRGSDHQVVPGVGDFSRRYF-EAKAIVE 913
G A+G G++ E+WK KH N+++L + LG M+ +R+ E +G F AN ++R LD A P +DEAV TP +G+L DDVKVC IS+ ++ E L + P + G + V+GL +G + +LP D+ +VLLL P + V + L VE+E +T+V++V A ++ + + R+V A+ D G+ H +VPG+G F RY A A VE
Sbjct: 38 GEALGRGVRLELWKAKHENVVVLGLESELIQLG-MTRIRDYENDGAKFTHDANGVLRSTLDLALTELP-NDEAVVTTPRGYKAKGLLFEDDVKVCGISIAVKPEVQSGLSHVLRTSLPFDSKYGEILVQGLAKGGMKIAKAQLPDDIDDHEVLLLCPELASISQVDKVIHLLMQQGVEEEKITVVTLVTCPAAADSFCKAFGDARLVTASFDTRLDGNGH-IVPGIGSFEERYLGAASAAVE 276
BLAST of mRNA_P-lacustris_contig104.415.1 vs. uniprot
Match: A0A0W8D6H8_PHYNI (Uracil phosphoribosyltransferase n=19 Tax=Phytophthora TaxID=4783 RepID=A0A0W8D6H8_PHYNI) HSP 1 Score: 103 bits (258), Expect = 7.700e-21 Identity = 77/256 (30.08%), Postives = 128/256 (50.00%), Query Frame = 2
Query: 197 FEPGHAVGVGLKAEIWKTKHPNLLILETIDDSPVLGLMSVVRNVETEGGAFLSAANRLMRQLLDFAEMGFPKDDEAVFATPARVMMQGVLPTDDVKVCAISLYLENEPCGVFDIELDGAFP-SFERGCLRVRGLTRGSSR----ELPRDMWGKQVLLLAPV---VGYAQPVLAALER-----LKLAD-----VEDEDVTLVSVVISKDALEALTEEAEEMRVVCAAMDGETRGSDHQVVPGVGDFSRRYFEAKAIV 910
+ G A+G G++ E+WK +H N+++L+ + LG M+ +R+ E G F AN ++R LD A P D+E+V TP +G++ DDVKVC IS+ + E L + P + G + V+ +G ++ LP D+ G +VLLL P V V+ R L+ A+ VE++ +T+V++V + + + ++ R+V A+ D H +VPG+G F RY A + V
Sbjct: 36 YASGEALGRGVRLELWKAQHENVVVLDLESELIQLG-MTRIRDYENAGAKFTHDANGVLRSTLDLALTELPSDEESVVTTPRGYKAEGLMFEDDVKVCGISIAVNPEAQKGLAQVLRTSLPYDAKYGEILVQEDAKGGNKIAKATLPEDLDGHEVLLLLPELASVSQIDKVIHVRSRVCWFVLESANDTGQGVEEDKITVVTLVTCPEGADGFCKAFDDARLVTASFDSRLNSEGH-IVPGIGSFEERYLGAPSSV 289
BLAST of mRNA_P-lacustris_contig104.415.1 vs. uniprot
Match: A0A5D6XUW6_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XUW6_9STRA) HSP 1 Score: 101 bits (251), Expect = 4.320e-20 Identity = 82/268 (30.60%), Postives = 128/268 (47.76%), Query Frame = 2
Query: 134 LGSSGGDSSAAAECSSAMTDP--FEPGHAVGVGLKAEIWKTKHPNLLILETIDDSPVLGLMSVVRNVETEGGAFLSAANRLMRQLLDFAEMGFPKDDEAVFATPARVMMQGVLPTDDVKVCAISLYLENEPCGVFDIELDGAFPSFER-GCLRVRGLTRGSSR----ELPRDMWGKQVLLLAPVVGYAQPVLAALERLKLADVEDEDVTLVSVVISKDALEALTEEAEEMRVVCAAMDGETRGSDHQVVPGVGDFSRRYF-EAKAIVE 913
LG+S G SAA ++P + G A+G G++ E+WK KH N+++L+ + LG+ F+ AN ++R +D A P D+EAV TP + V+ DDVKV +S+ E L P + G + V +G + LP D+ G VLLL P + V A L+ V++E +T+V++V +A + + + R+V AA D R + +VPG+GDF RY +A +VE
Sbjct: 18 LGASAGALSAA------HSEPRVYSSGEALGRGVRLELWKAKHENVVVLDLESELIQLGM-----------ARFVHDANSVLRAAVDLALTELPNDEEAVVTTPRGHRCEAVVFEDDVKVVGVSIAKTPEVNKSLQQVLVTTLPFESKVGEILVAETDKGDYKVVTVALPDDLDGCDVLLLVPDFAALEQVTKAFHLLRQQGVDEEKITVVTLVTCPEAADRFCQTFGDARLVTAAFDA-ARDKEGCIVPGIGDFESRYMGQAATVVE 267
BLAST of mRNA_P-lacustris_contig104.415.1 vs. uniprot
Match: A0A0P1AV45_PLAHL (Armadillo/beta-Catenin/plakoglobin n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AV45_PLAHL) HSP 1 Score: 100 bits (250), Expect = 7.100e-20 Identity = 70/243 (28.81%), Postives = 120/243 (49.38%), Query Frame = 2
Query: 197 FEPGHAVGVGLKAEIWKTKHPNLLILETIDDSPVLGLMSVVRNVETEGGAFLSAANRLMRQLLDFAEMGFPKDDEAVFATPARVMMQGVLPTDDVKVCAISLYLENEPCGVFDIELDGAFP-SFERGCLRVRGLTRGSSR----ELPRDMWGKQVLLLAPVVGYAQPVLAALERLKLADVEDEDVTLVSVVISKDALEALTEEAEEMRVVCAAMDGETRGSDHQVVPGVGDFSRRYFEAKAIV 910
+ G A+G G++ E+WK +H N+++L+ + LG M+ +R+ + G F AN ++R + A P DDEAV TP ++G++ DDVKVC IS+ + + L P + G + V+ +G S P + +VLLL P + V + L ++E +T+V++V +A + + + R+V A++D + Q+VPG+G F RY A + V
Sbjct: 36 YTSGEALGRGVRLELWKAQHENVVVLDLESELIQLG-MTRIRDYKNAGAQFAHDANGVLRSACELALAELPTDDEAVVTTPHGYKIEGLVFEDDVKVCGISIAVNPDAQKGLSQVLQTTLPYDAKYGEILVQDAAKGGSAIVKATFPEGLEDYEVLLLLPELASVSQVDKVIHLLMHHGAKEEKITVVTLVTCSEAADGFCKAFGDARLVTASLDSRLN-KEGQLVPGMGFFEERYLGAPSSV 276
BLAST of mRNA_P-lacustris_contig104.415.1 vs. uniprot
Match: A0A484EG38_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EG38_BRELC) HSP 1 Score: 100 bits (249), Expect = 1.120e-19 Identity = 78/256 (30.47%), Postives = 121/256 (47.27%), Query Frame = 2
Query: 197 FEPGHAVGVGLKAEIWKTKHPNLLILETIDDSPVLGLMSVVRNVETEGGAFLSAANRLMRQLLDFAEMGFPKDDEAVFATPARVMMQGVLPTDDVKVCAISLYLENEPCGVFDIELDGAFPSFER--GCLRVR-----GLTRGSSRELPRDMWGKQVLLLAPVVGYAQPVLAALERLKLADVEDEDVTLVSVVISKDALEALTEEAEEM----------RVVCAAMDGETRGSDHQVVPGVGDFSRRYFEAKAIVE 913
+ G A+G G++ E+WK +H N+++L+ + LG M+ +R+ G F AN ++R LD A P DD AV TP + GVL D+VKVC IS+ + E L P FE G + V+ G TR + LP + +V LL P V + LK E++ +TLV++V +A++ + + + R+V A+ D H +VPG+G F RY A + +E
Sbjct: 36 YTSGEALGRGVRRELWKAQHENVVVLDLESELIKLG-MTRIRDYANAGAKFTHDANAVLRSTLDLALSELPSDDNAVVTTPRGYKVDGVLLEDNVKVCGISIAAKPEAQICLSRVLRTCLP-FEAKFGEILVQEVANGGNTRIAKTTLPDGLEQHEVFLLMPEFALISQVDKIIHLLKHHGAEEDKLTLVTLVTCPEAVDRFCKVDQSICGMSCAFRDARLVTASFDSRLNNDSH-IVPGIGSFEERYLGAPSSME 288
BLAST of mRNA_P-lacustris_contig104.415.1 vs. uniprot
Match: G4Z1L4_PHYSP (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=G4Z1L4_PHYSP) HSP 1 Score: 93.6 bits (231), Expect = 1.420e-17 Identity = 74/243 (30.45%), Postives = 115/243 (47.33%), Query Frame = 2
Query: 197 FEPGHAVGVGLKAEIWKTKHPNLLILETIDDSPVLGLMSVVRNVETEGGAFLSAANRLMRQLLDFAEMGFPKDDEAVFATPARVMMQGVLPTDDVKVCAISLYLENEPCGVFDIELDGAFPSFER-GCLRVRGLTRGSSR----ELPRDMWGKQVLLLAPVVGYAQPVLAALERLKLADVEDEDVTLVSVVISKDALEALTEEAEEMRVVCAAMDGETRGSDHQVVPGVGDFSRRYFEAKAIV 910
+ G A+G G++ E+WK +H N+++L+ + LG M+ +R+ E G F AN ++R LD A P D+EAV TP ++G++ DDVKVC IS+ + E L + P + G + V+ L +G ++ LP D+ G ++LLL P +LA V D + + DA R+V A+ D H +VPG+G F RY A + V
Sbjct: 36 YASGEALGRGVRLELWKAQHENVVVLDLESELIQLG-MTRIRDYENAGAKFTHDANGVLRSTLDLALTELPNDEEAVVTTPRGYKVEGLVFEDDVKVCGISIAAKPEAQKGLSQVLRTSLPYDSKYGEVLVQQLPKGGNKITKATLPDDIDGHEILLLLP---------------ELASVSQVDKIIHAF---GDA-----------RLVTASFDSRLNNDGH-IVPGIGAFEERYLGAPSAV 247
BLAST of mRNA_P-lacustris_contig104.415.1 vs. uniprot
Match: A0A7S1CHZ5_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CHZ5_9STRA) HSP 1 Score: 92.4 bits (228), Expect = 4.200e-17 Identity = 69/238 (28.99%), Postives = 121/238 (50.84%), Query Frame = 2
Query: 197 FEPGHAVGVGLKAEIWKTKHPNLLILETIDDSPVLGLMSVVRNVETEGGAFLSAANRLMRQLLDFAEMGFPKDDEAVFATPARVMMQGVLPTDDVKVCAISLYLEN----EPCGVFDIELDGAFPSFERGCLRVRGLTRGSSRELPRDMWGKQVLLLAPVVGYAQPVLAALERLKLADVEDEDVTLVSVVISKDALEALTEEAEEMRVVCAAMDGETRGSDHQVVPGVGDFSRRYFEA 898
+EP AVG GL+ E WK KH N+ ILE +D P+ L++ RN + AF +RL+ L+ A P +D V TP +G D+ + A+++ EP + A+ + + V +++ LPRD+ VL+L+P++ A +E+L V+++++ ++ + ++ + + LT ++ VV A+MD ++ ++VPGVGDF +RY EA
Sbjct: 62 YEPCEAVGDGLRGEFWKAKHGNITILE-LDYEPLQVLLTRARNAACDSKAFNFFIHRLLSLTLEMALGALPTED-VVVTTPDGYKFRGKEYEKDLSLLAVTVSQSGTHMVEPLQRLSPGIPIAYATNDPSTHTV------TTKGLPRDVSDYHVLVLSPIMRGGLKESAVIEQLTKRGVQEDNIQVICLFMTPQSADLLTSRHPDVAVVAASMDAGI-DAEGRLVPGVGDFEKRYNEA 290 The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig104.415.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 20
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-lacustris_contig104.415.1 >prot_P-lacustris_contig104.415.1 ID=prot_P-lacustris_contig104.415.1|Name=mRNA_P-lacustris_contig104.415.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=327bp MLPPLGGLASGGVNACLLLICDAVCGLRFICRLLLLLLLPQLGSSGGDSSback to top mRNA from alignment at P-lacustris_contig104:145685..154219- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-lacustris_contig104.415.1 ID=mRNA_P-lacustris_contig104.415.1|Name=mRNA_P-lacustris_contig104.415.1|organism=Pleurocladia lacustris SAG_25_93|type=mRNA|length=8535bp|location=Sequence derived from alignment at P-lacustris_contig104:145685..154219- (Pleurocladia lacustris SAG_25_93)back to top Coding sequence (CDS) from alignment at P-lacustris_contig104:145685..154219- >mRNA_P-lacustris_contig104.415.1 ID=mRNA_P-lacustris_contig104.415.1|Name=mRNA_P-lacustris_contig104.415.1|organism=Pleurocladia lacustris SAG_25_93|type=CDS|length=1962bp|location=Sequence derived from alignment at P-lacustris_contig104:145685..154219- (Pleurocladia lacustris SAG_25_93)back to top |