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Homology
BLAST of mRNA_P-lacustris_contig104.402.1 vs. uniprot
Match: D7G3J8_ECTSI (TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3J8_ECTSI) HSP 1 Score: 447 bits (1151), Expect = 3.940e-133 Identity = 245/329 (74.47%), Postives = 265/329 (80.55%), Query Frame = 1
Query: 1927 PAGPGPAGVARAEGLAEAVCAPAGCGDTSMAEAVAAAAGGEWDAKRAEEMIKRAVLIQGRNLGLRHPAVASSMTAMAELYRKQGRLAEAEPLFRRAISIWEVSPGP--MDSEAVAALHGTAHCVLAGAGADWMGRFEEAFDLVDQAYRISSSHPGNDASSRLLLEALRMIRSRQRQGRGDPQPASAAIMAGVWEGRWDPSKNADGVDEGGGGSGGKPAHARNRSGSGDNPRCAVCLEEVGGGEEEEIGQKVG---GLTGFGATGDWTADIGSKEAFRTET-ENVHARGSFAYLPCGHRFHTNCIGRWLAHSSSCPSCRSRLVDEEETTA 2895
PAGPG AG+ R+ GLAEAVCA AGCG AVAAAAG +WD K+AEEMIKRAVLIQGR+LGLRHPAVASSM AMAELYR+QGRLAEAEPLFRRAI IWE+S G MDS+A+AALHGTAHCVLAGAGADW+GRFEEAF LVDQAYRI+SSHPGNDASSRLLLEALRMIRSRQRQGRGDPQPASAAIM GVW GRWDP+KN DG GG G H R+RS NPRCAVCLEEVGGGE G +G DWTADIGS+E R ET E+VHA GSFAYLPCGHRFHT+CIGRWLAHSSSCPSCRS++ +E TA
Sbjct: 501 PAGPGCAGIQRSAGLAEAVCASAGCG-VEDGSAVAAAAGVDWDPKKAEEMIKRAVLIQGRHLGLRHPAVASSMRAMAELYRRQGRLAEAEPLFRRAIGIWELSRGGGGMDSDAIAALHGTAHCVLAGAGADWLGRFEEAFALVDQAYRIASSHPGNDASSRLLLEALRMIRSRQRQGRGDPQPASAAIMEGVWTGRWDPAKN-DGTSGGGATQG---RHVRSRSNGDGNPRCAVCLEEVGGGEPTVDGGALGREGXXXXXXXXADWTADIGSEEGLRAETAESVHASGSFAYLPCGHRFHTHCIGRWLAHSSSCPSCRSQVEEETIPTA 824
BLAST of mRNA_P-lacustris_contig104.402.1 vs. uniprot
Match: A0A6H5JNZ5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNZ5_9PHAE) HSP 1 Score: 284 bits (727), Expect = 1.430e-78 Identity = 229/489 (46.83%), Postives = 269/489 (55.01%), Query Frame = 2
Query: 512 DAGAEATQRKALALRCRAWEGGSGVVSTGERSXXXXXXXXXXXXCVSGL-DPSK-VMEAKRAALPCLRNLANFISNQGRHADAEVVLRTVLNTLEDYNEELSKGSQRRDAKDKDGVEGGKSVRDSVPACPDGEEGSDVDPAAAAXXSSLDTRRLSLXXXXXXXXXXXXSRGSDGADAVQPSARQPLLGMVEAKGGTATLDARRIIIARGXXXXXXAGSGGHERENGSFTPGLGQRSSSVQAAGDSAGGTVHHG---GTTAQATAALAAETATTAIKAATGAAVVNSATA--------MGRSFPTRM-ASPAPPPPSPFPQIGNAT--PT-GRPSGELEEGRLSRTK-SGGDSEGHRGGGVVERDLDSIEGGDNEDPQQMAAVTRHLLAVVVHAQGRVSEAELLLEDSIRALKRRNPPQALWVAQALHDLASVVRPVSPARACTLYLEALKLLEGTRGVNHFLTAPTLAKLGSLLGDSLVAKANIRPAPA 1924
DAGAEA QR ALALRCR WE G V G C SGL DPS V+ AKRAA+PCLRNLA+F+SNQGRH DAEVVLRTVLN L DY ++LS SQ D GK R++ DG G A+ S + R DG+ A P+ P L V G + R + R +GG E+G+ TP G R S+ A V AQATAALA ET +A+ AAT A V TA + + TR ASPA P + A+ PT GR G LEE RL K +GG+S G ER L+ +EGG++EDP QMAAVTRH LAVV+HAQGR EAE LLEDS+R LKRR PPQA+ VAQA+HDLA +VRP PARACTLY +ALK LEG GV+HFLT PTLAKLG+LLG+SLVA A+I PA
Sbjct: 28 DAGAEAAQRHALALRCREWEDRDGGVFAG--GGRQEGDAGRGAGCDSGLLDPSSAVVAAKRAAVPCLRNLASFVSNQGRHVDAEVVLRTVLNILRDYKQQLS--SQHHD---------GKGKREADAPQLDGGGGFGTHSASFTPSSFEERRSDEARADVGSPAPSPTPETHDGSPAAHPTTAPPPLSAVPEVG----IAGRYESLGRDGSTANPT-TGGDAYESGN-TP-AGSRPSAETAGXXXXXXXVEGDDLRSQAAQATAALAEETVASAMAAATRAVAVMGETAATLEPSLVVNHNRATRSDASPAXXXXXXVPLMKQASAGPTAGRRGGRLEESRLPGMKFAGGES------GDDERGLEDVEGGEDEDPDQMAAVTRHRLAVVIHAQGRAKEAEQLLEDSLRVLKRRKPPQAVCVAQAMHDLAGIVRPADPARACTLYRQALKTLEGACGVDHFLTTPTLAKLGALLGESLVAAADIPITPA 490
BLAST of mRNA_P-lacustris_contig104.402.1 vs. uniprot
Match: A0A6H5JPJ0_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPJ0_9PHAE) HSP 1 Score: 202 bits (514), Expect = 6.370e-55 Identity = 115/174 (66.09%), Postives = 123/174 (70.69%), Query Frame = 1
Query: 2386 NDASSRLLLEALRMIRSRQRQGRGDPQPASAAIMAGVWEGRWDPSKNADGVDEGGGGSGGKPA---HARNRSGSGDNPRCAVCLEEVGGGEEEEIGQKVGGLTG--FGATGDWTADIGSKEAFRTET-ENVHARGSFAYLPCGHRFHTNCIGRWLAHSSSCPSCRSRLVDEEET 2889
+DA SRLLLEALRMI SRQRQGRGDPQPASAAIM GVW GRWDP+KN GG S G HAR+ NPRCAVCLE VGGGE G +G G A DWTADIGS E R ET E+VHA SFAYLPCGHRFHT+CIGRWL HSSSCPSCRS++ EEET
Sbjct: 7 SDACSRLLLEALRMIGSRQRQGRGDPQPASAAIMEGVWTGRWDPAKN-------GGSSRGDATQGRHARSPGNGDGNPRCAVCLEAVGGGEPTVDGGALGREGGGRAAAAADWTADIGSDEGLRAETMESVHASRSFAYLPCGHRFHTHCIGRWLVHSSSCPSCRSQV--EEET 171
BLAST of mRNA_P-lacustris_contig104.402.1 vs. uniprot
Match: A0A6H5JPD7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPD7_9PHAE) HSP 1 Score: 82.0 bits (201), Expect = 7.370e-15 Identity = 49/104 (47.12%), Postives = 65/104 (62.50%), Query Frame = 2
Query: 221 MTTARVEQVETGD--DGPATSSASLLVLEEKAGRLFRRCRYDDAANAFQTLVDAAQVQQETTA-----EQERGWNDDTSMNAGSYSTEIRALEGLAVCLSRQLD 511
M+ RVEQ GD G + SL LEEKA RL +R RYDDAA F+T+++ AQVQ++ A +Q++ W D + +S EI ALEGLA+CLSRQL+
Sbjct: 1 MSAPRVEQASAGDISSGSHAAGPSLQALEEKARRLLKRRRYDDAAKTFKTILEVAQVQRDAAAGRGRQQQQQHWPDPKRI----WSLEIGALEGLAICLSRQLE 100
BLAST of mRNA_P-lacustris_contig104.402.1 vs. uniprot
Match: UPI001BE10FAB (tetratricopeptide repeat protein n=1 Tax=Klebsiella pneumoniae TaxID=573 RepID=UPI001BE10FAB) HSP 1 Score: 55.1 bits (131), Expect = 8.940e-6 Identity = 24/40 (60.00%), Postives = 33/40 (82.50%), Query Frame = 1
Query: 2110 LGLRHPAVASSMTAMAELYRKQGRLAEAEPLFRRAISIWE 2229
LG HP VA+S+ +AELYR QG+ A+AEPLF+R+++IWE
Sbjct: 2 LGPDHPDVATSLNNLAELYRSQGQYAQAEPLFKRSLAIWE 41
BLAST of mRNA_P-lacustris_contig104.402.1 vs. uniprot
Match: UPI001F409832 (tetratricopeptide repeat protein n=1 Tax=Reticulibacter mediterranei TaxID=2778369 RepID=UPI001F409832) HSP 1 Score: 56.2 bits (134), Expect = 1.600e-5 Identity = 28/60 (46.67%), Postives = 40/60 (66.67%), Query Frame = 1
Query: 2074 MIKRAVLIQGRNLGLRHPAVASSMTAMAELYRKQGRLAEAEPLFRRAISIWEVSPGPMDS 2253
M++RA+L+ G H VA+ +T++A LY QG+ AEAEPLF+RA+ IWE G +S
Sbjct: 1 MLERALLVDEMVYGSDHLLVAADLTSLAHLYLDQGQYAEAEPLFKRALVIWEHKRGSEES 60
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Hectar predicted targeting category | other localisation |
| Exons | 9 |
| Model size | 4908 |
| Cds size | 1752 |
| Stop | 1 |
| Start | 1 |
Relationships
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622815310.0130842-UTR-P-lacustris_contig104:48598..50690 | 1622815310.0130842-UTR-P-lacustris_contig104:48598..50690 | Pleurocladia lacustris SAG_25_93 | UTR | P-lacustris_contig104 48599..50690 - |
| 1693493466.6714478-UTR-P-lacustris_contig104:48598..50690 | 1693493466.6714478-UTR-P-lacustris_contig104:48598..50690 | Pleurocladia lacustris SAG_25_93 | UTR | P-lacustris_contig104 48599..50690 - |
| 1622815310.0249097-UTR-P-lacustris_contig104:51231..51660 | 1622815310.0249097-UTR-P-lacustris_contig104:51231..51660 | Pleurocladia lacustris SAG_25_93 | UTR | P-lacustris_contig104 51232..51660 - |
| 1693493466.6799815-UTR-P-lacustris_contig104:51231..51660 | 1693493466.6799815-UTR-P-lacustris_contig104:51231..51660 | Pleurocladia lacustris SAG_25_93 | UTR | P-lacustris_contig104 51232..51660 - |
| 1622815310.0334895-UTR-P-lacustris_contig104:51866..52276 | 1622815310.0334895-UTR-P-lacustris_contig104:51866..52276 | Pleurocladia lacustris SAG_25_93 | UTR | P-lacustris_contig104 51867..52276 - |
| 1693493466.688517-UTR-P-lacustris_contig104:51866..52276 | 1693493466.688517-UTR-P-lacustris_contig104:51866..52276 | Pleurocladia lacustris SAG_25_93 | UTR | P-lacustris_contig104 51867..52276 - |
| 1622815310.041742-UTR-P-lacustris_contig104:52498..52503 | 1622815310.041742-UTR-P-lacustris_contig104:52498..52503 | Pleurocladia lacustris SAG_25_93 | UTR | P-lacustris_contig104 52499..52503 - |
| 1693493466.699549-UTR-P-lacustris_contig104:52498..52503 | 1693493466.699549-UTR-P-lacustris_contig104:52498..52503 | Pleurocladia lacustris SAG_25_93 | UTR | P-lacustris_contig104 52499..52503 - |
| 1622815310.1229103-UTR-P-lacustris_contig104:58219..58439 | 1622815310.1229103-UTR-P-lacustris_contig104:58219..58439 | Pleurocladia lacustris SAG_25_93 | UTR | P-lacustris_contig104 58220..58439 - |
| 1693493466.7679036-UTR-P-lacustris_contig104:58219..58439 | 1693493466.7679036-UTR-P-lacustris_contig104:58219..58439 | Pleurocladia lacustris SAG_25_93 | UTR | P-lacustris_contig104 58220..58439 - |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622815310.0510993-CDS-P-lacustris_contig104:52503..52764 | 1622815310.0510993-CDS-P-lacustris_contig104:52503..52764 | Pleurocladia lacustris SAG_25_93 | CDS | P-lacustris_contig104 52504..52764 - |
| 1693493466.70917-CDS-P-lacustris_contig104:52503..52764 | 1693493466.70917-CDS-P-lacustris_contig104:52503..52764 | Pleurocladia lacustris SAG_25_93 | CDS | P-lacustris_contig104 52504..52764 - |
| 1622815310.060483-CDS-P-lacustris_contig104:53125..53197 | 1622815310.060483-CDS-P-lacustris_contig104:53125..53197 | Pleurocladia lacustris SAG_25_93 | CDS | P-lacustris_contig104 53126..53197 - |
| 1693493466.7173622-CDS-P-lacustris_contig104:53125..53197 | 1693493466.7173622-CDS-P-lacustris_contig104:53125..53197 | Pleurocladia lacustris SAG_25_93 | CDS | P-lacustris_contig104 53126..53197 - |
| 1622815310.070778-CDS-P-lacustris_contig104:53826..54007 | 1622815310.070778-CDS-P-lacustris_contig104:53826..54007 | Pleurocladia lacustris SAG_25_93 | CDS | P-lacustris_contig104 53827..54007 - |
| 1693493466.7272146-CDS-P-lacustris_contig104:53826..54007 | 1693493466.7272146-CDS-P-lacustris_contig104:53826..54007 | Pleurocladia lacustris SAG_25_93 | CDS | P-lacustris_contig104 53827..54007 - |
| 1622815310.0815995-CDS-P-lacustris_contig104:54021..54713 | 1622815310.0815995-CDS-P-lacustris_contig104:54021..54713 | Pleurocladia lacustris SAG_25_93 | CDS | P-lacustris_contig104 54022..54713 - |
| 1693493466.734743-CDS-P-lacustris_contig104:54021..54713 | 1693493466.734743-CDS-P-lacustris_contig104:54021..54713 | Pleurocladia lacustris SAG_25_93 | CDS | P-lacustris_contig104 54022..54713 - |
| 1622815310.0947413-CDS-P-lacustris_contig104:54896..55152 | 1622815310.0947413-CDS-P-lacustris_contig104:54896..55152 | Pleurocladia lacustris SAG_25_93 | CDS | P-lacustris_contig104 54897..55152 - |
| 1693493466.7501209-CDS-P-lacustris_contig104:54896..55152 | 1693493466.7501209-CDS-P-lacustris_contig104:54896..55152 | Pleurocladia lacustris SAG_25_93 | CDS | P-lacustris_contig104 54897..55152 - |
| 1622815310.1105616-CDS-P-lacustris_contig104:57929..58219 | 1622815310.1105616-CDS-P-lacustris_contig104:57929..58219 | Pleurocladia lacustris SAG_25_93 | CDS | P-lacustris_contig104 57930..58219 - |
| 1693493466.7598822-CDS-P-lacustris_contig104:57929..58219 | 1693493466.7598822-CDS-P-lacustris_contig104:57929..58219 | Pleurocladia lacustris SAG_25_93 | CDS | P-lacustris_contig104 57930..58219 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-lacustris_contig104.402.1 >prot_P-lacustris_contig104.402.1 ID=prot_P-lacustris_contig104.402.1|Name=mRNA_P-lacustris_contig104.402.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=584bp
MTTARVEQVETGDDGPATSSASLLVLEEKAGRLFRRCRYDDAANAFQTLV DAAQVQQETTAEQERGWNDDTSMNAGSYSTEIRALEGLAVCLSRQLDDAG AEATQRKALALRCRAWEGGSGVVSTGERSRSRSVGSGSGSGCVSGLDPSK VMEAKRAALPCLRNLANFISNQGRHADAEVVLRTVLNTLEDYNEELSKGS QRRDAKDKDGVEGGKSVRDSVPACPDGEEGSDVDPAAAAAASSLDTRRLS LSTSETSSSTTTTSRGSDGADAVQPSARQPLLGMVEAKGGTATLDARRII IARGGGSSNNAGSGGHERENGSFTPGLGQRSSSVQAAGDSAGGTVHHGGT TAQATAALAAETATTAIKAATGAAVVNSATAMGRSFPTRMASPAPPPPSP FPQIGNATPTGRPSGELEEGRLSRTKSGGDSEGHRGGGVVERDLDSIEGG DNEDPQQMAAVTRHLLAVVVHAQGRVSEAELLLEDSIRALKRRNPPQALW VAQALHDLASVVRPVSPARACTLYLEALKLLEGTRGVNHFLTAPTLAKLG SLLGDSLVAKANIRPAPAARRAQDQPVLLGPRA* back to topmRNA from alignment at P-lacustris_contig104:48599..58439- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-lacustris_contig104.402.1 ID=mRNA_P-lacustris_contig104.402.1|Name=mRNA_P-lacustris_contig104.402.1|organism=Pleurocladia lacustris SAG_25_93|type=mRNA|length=9841bp|location=Sequence derived from alignment at P-lacustris_contig104:48599..58439- (Pleurocladia lacustris SAG_25_93) CTTGACTTCACACCTTCCCTCCTTCCTCCGCGCGGCGCGTCCAGGCCACA
CACGCCCGCACCTTGGGTTGAGGTCCTGGACGAACGAGGGGTGGTGATCA
GTTCAGGGGCTCTCGTGGCAAGGTTGCGGCGTCGATCCATCCTAGTGCTG
CTGTGATATATCAGCGCTCTTTGTTTGAGTTTGAATCGTACACCCCAGCA
ATTCAAGCAGCAATTTAAGGATGACGACGGCGAGGGTTGAACAAGTGGAA
ACTGGTGACGATGGCCCGGCAACCTCTTCCGCTTCTCTCCTCGTGCTTGA
GGAGAAGGCTGGGCGGCTGTTCAGACGCTGCCGGTATGACGACGCAGCGA
ACGCTTTTCAAACGCTGGTCGACGCGGCTCAAGTTCAACAAGAGACCACA
GCAGAGCAAGAGAGGGGCTGGAATGATGACACGAGCATGAACGCCGGGAG
CTACTCCACGGAGATTAGGGCGTTGGAAGGCCTCGCCGTCTGCCTCAGCC
GTCAGCTTGAGTGAGTTTTGCGCTGAGACCTGTGGCAGCAGCAGTTGTGT
AGTTCCGTCCGTTATGTCCTCTCTCTCGACAAATAGAGTAGAGTGAAGAA
AATCCTCTCGCCTCTCTCCACCTCTCCACCCCCACAAGCAGCGAGGAGTG
TAAATATGACAGATATCGACGTCATGAAGACCATGCGGACCTATTTACAC
GCCCACCGCCCTTATGTGCGGCTGTACTGAAGTAGTAGCGGTTGTGTTCA
TTGGACGCCCATGGGTTTCCCCATTCAGAAAAACATGCACACACAAGCAC
AACAAGGATCGGATATCCGCGATATGCTCCTCCTGTAGTACCGCCCGCGC
AGAACGCCAGGGTGTGAGTGTGTGCTTCATGGAGAAAGCAACGTTGCCGG
ACCATGCGGCGCGGACGATCGCTTCTTGCGTATAGACGAAGGTCGGATCG
GATTACGTCCATTTCTAGGTGTCTATAGCCTCTTCTGTTGCTACTGCAGT
ATAGACTCTTGACGGATGTGAGTAAGGAGTAGACTTTTATCGTTAACCCA
TCATTCGTTATTTTTGTGCTGAATGCATGCTTTATTCGCCCCCGTTCTAT
GCATCTGGACGCACGCTGTCACGTGAGGTTGAAACGGGTTTTCCTCCACC
CAAAAAACGCGTTGTAGGGTTAGAGTTAGGCGATGGTAAGAATCTGGTAG
CCGTTGCACAGCACTACTTGTAGGGTGTCGTCGGCCGGATAGATCGGCTC
TTCTCTCCTTTCCTTCAGTATGCGTGGGTGCGTTTCTAGCAAGCACAACT
CCAAAACGAACAGTGCTGGAGAACGAGTGGGGTGCGACCCACACGTGTGT
GTCCTCAGTACAAAGTCTGGTCCAGCAGCAGCGGGCGGTACCACACACGC
CTCACTTGAACAATGCTAGACTAGCACCGCTTAGGCCCTCTTTCCGACAA
ACAAAATATGCCGGATTGAGGACACCATGAACTCCACAAACATGTTGAGG
ATTGTTCTCACCGATAATTTCGTTGGCTGCGTCGAGATCATTTACGGTGA
ATTCAGCAACGCTATCCGACACGGGACCTGCAGGGATGTCATGAAATCCT
TGCGGAAAAGGTCAAGGCAGAAAAGAAATACTCGTGGTACAGCAGTAGAA
TAGTTTTGTCCAGCATGTTCCGAAAAGGCACGACACTGTTTTGTACGGAG
TATCTTGAAGTGGTCGAGGTCGATCGAAGACACCAGGAAATCGAGTGGTA
CACGCCGTCGATCGACGTCTTCGTATCCTACATGTAATTCTCCAGAAAGT
AGAAAAAATGAAATATTTATGTCTTCAGGTCTAGGCCTCTCATCAAACTC
TCCGTTCAAGTCGTTTTCTTCGACTAGCTCGCTACCACACAAATCTTACT
CATTGCTTCATTATTTTCGTCGGCCTAGGAAACCTTTGCGTCTTGAACCC
CCGCTGCGAGCTCGAGGCTCTACGCGCGAGACCTGTTACGGCTACGGCGC
CGTCAAGTACGATACGATACCCTCAATCTCCGACTCCGAACCTGCGTATT
TTTCCTCTGCTGTGCTATGCATAGCTCTGAAAAACATTTAAAATCTCCCA
TGCCGCCTCTCCCGCCAAAAATGCTGGGACGCGAAAAGATGAAAATTGTG
AAATGCTCAGACATGCACATCAAAAAGGATGAAACGCGTGAAGATGACCT
TTCGATGATATCTGCCGCGTGCGTCGAAATAAAGGTCCGGAACTCGCGAT
GTTGGTGAACTTCGATCGCCTTTTATTTTTTTCCATTGCAAAATTAATCA
AAACCATCTCCTGTATCTCTATGTGCTGTGGATATGATCTTGTTGATTTT
CTGAAGCTTGTTCAATGGCGCTCGCTGCATCCACACAATGCTCTAGACCG
CCTGTACACAAAAAAAAAACGGTGACACTTGATGGGTGTGATGGGCAGCA
GTTTTGTCTTAGAGCTTGAATATGTCATCTACTTGCCGCTTGGTGTGCAG
TTTATGCCTACCACTTACTACACTAGCAGTCCTAACCCCTCAACGGAGGG
AGGAAGGACGGGCGGGGGCGCCTTTGCGACCCCCGCGTCTTGTAAACCCG
TATTATGTAATGCCAACCCATATTATTTAATGCCTTGTTTTCTTGGGGCG
AGACTTGTCACAAATATATACACCTCCCATCGACGTTTTTTAAATGGAAC
GTGATCACCAAGCTTTTTTTGCATATTTCCTGTATTCTACTGCAGGATCA
GTAGAGAAGCTGGTGGGCCACACACTTGGAATCCATTGCTATTCGTCTCG
GACTCTTCACCATAGATTTGTATTTGTTTTGCTTTTGTAGGAAAAAATAC
CATGGAATGTGCGATTGGCGTGCACCACATTCGTACACCCACGTTCTTTG
TTTTGCGGGAATACCGCGGGCGGATGTCTCCATGCGAAGTGGTACAACAA
TTTGATTCACCGGGAAGCTATGCGTACCACTGTATTACACTGATAGATCG
TCTCCATTAGATGGCGATGAATCCATATCTAGTTCATCTCGGGGCTACCG
TTACACATCCAGATAGAGAGAGAACTTCGGTTTGTTTCTGGAGCGAAACA
AAAAAGAAATAACAGTTAACGCTGAAGATGGCGCAAGTCTGAAAGCCTGA
ATCCGCCGCCTGCGATTTAATTAGTCACCGTGAAGCGAACAAAGGGACTT
GTTTCCAATGCTGATTTTTGCAAATGTGCCTCCGAATGACCAATGGCTCC
ACTCCCAAAATGCCAATCGCTGTATGATGCCAAACAGCGATGCCGGCGCG
GAGGCCACACAGCGAAAAGCTCTGGCCCTGAGGTGTCGGGCATGGGAAGG
CGGCTCGGGAGTCGTGTCTACTGGGGAAAGGTCGCGGTCTAGGTCAGTGG
GTTCTGGTTCTGGTTCTGGTTGTGTTTCGGGCTTGGACCCGTCGAAGGTG
ATGGAGGCAAAGCGAGCCGCGCTGCCGTGCCTGCGCAACCTGGCTAACTT
CATCTCCAACCAGGGAAGGCATGCGGACGCCGAAGTTGTACTGGTGAGTG
AATTGCAGGGGTATTTTTGTATGCGGCGAGCACCGCTGATATTCAAATGT
AAATTAGAATAGTCCTGGAAAACCTTACGCCGTTGTAGAACGTGCTGCTT
TGCGGGTGTTCCGCTCTTTCACATCTCGCGTATCTCCCCCCGTCCCCTCC
CTTCGGCGGCCTCGCAAACCCACCAGCGCACAGTGCTCAACACCCTCGAA
GACTACAATGAAGAGCTTAGCAAGGGTAGTCAGCGCCGCGACGCCAAGGA
CAAGGACGGGGTTGAAGGCGGCAAGTCCGTGCGCGACTCAGTACCGGCGT
GTCCAGACGGCGAGGAAGGCTCGGACGTCGACCCTGCCGCCGCCGCCGCC
GCCTCTTCCCTGGACACGCGGCGTTTGTCCCTGTCGACGTCCGAGACCTC
TAGCAGTACCACCACCACCAGCAGGGGCAGTGACGGTGCAGACGCAGTTC
AACCGAGTGCGAGACAGCCGTTGTTAGGGATGGTGGAAGCCAAGGGAGGC
ACCGCTACACTAGATGCCAGACGCATAATTATTGCTAGGGGTGGCGGCTC
TTCCAACAACGCCGGGAGTGGCGGGCACGAGCGCGAGAACGGGAGCTTTA
CGCCGGGACTGGGACAGCGGTCGTCAAGTGTCCAAGCCGCAGGCGATAGC
GCAGGCGGAACTGTGCACCACGGGGGTACTACCGCACAAGCGACTGCGGC
GCTGGCGGCAGAAACAGCGACAACGGCGATAAAAGCGGCCACAGGAGCGG
CGGTTGTGAATTCAGCGACGGCGATGGGGAGGTCCTTCCCCACTCGCATG
GCTTCCCCCGCCCCTCCACCACCCTCCCCATTCCCGCAAATAGGCAACGC
GACGCCGACAGGACGACCGTAAGGTGCGCCAGCAGCGGTGAGCTCGAGGA
AGGTAGGCTCTCCAGGACGAAGTCTGGTGGCGACAGCGAGGGGCATCGCG
GAGGTGGCGTCGTCGAGCGAGACTTGGACAGCATTGAAGGAGGGGACAAT
GAAGATCCGCAGCAGATGGCGGCGGTGACGAGGCACCTCCTTGCCGTTGT
CGTTCACGCACAGGTGTCGCACAAATTAGCATGGACAGCGCTAACCAGCT
GGCCAATGAAAGGAAATCAGTCTTGGTGGAACCGTAACGCTCCCACGCTT
TCATTCTTAACCGCGGCCTCCCCTGACGCGATGGGGGGTACGTTTATTGT
CAACCAGACTGGTAGAAATGGCCCTGACGACCTTTAAAGATCGAGCGATC
CGAATTCAAAGAAGTGGGATTGTCGATCGTGGCAAACACCAGCTGTTTTT
GTGTCCTTCTTAAATTGACATCAACCTCGCTAACCTTCTGACCAATGGAG
TGATGTCAGTTTTCGTGGGACGAAAGCCTGTCTGCGTGTGAGTGTGCTGA
CTGGTGTGCTTTGACGTTACGGCTGACGCAGCTCCTGACGCTGTACGACT
GTGTGTGACTGCGCCAGTGTCTCCAGCTGTGGTTCAATGTGCTTTCTTGA
GAACGATCGTCGAAGTGGACGTGCAACAAGACCCGCAACATCGTGGCGAG
AGCTTTGCTTGCCCTGCTTCGATGCCTGTCATCACGCCACGGCACGCACG
TGCGAGTCATTCTGGTCGTACTAGTCCAAACCCTCAAAACGCTAGCGTAT
TGTATTATTTCCTCGCGTTTCGCTGGCCTCCTACCTCGCCAGGGTCGGGT
GTCCGAGGCCGAGCTGCTTTTGGAGGACAGCATTCGCGCCCTCAAACGGA
GAAATCCGCCGCAGGTGTGAAGAATCTTAAAAATGTATCCCAAATGCGAT
GAACAGGACTAAGGAACTGGAGACCCGACCGTAAATCCAAGGGAGGTAGA
TTTGATGATACGCGATGCGCCGTCTCGTTGATTGTTTTACAAGGAGGTTT
TGATGCCGTCGTGGTCATGGTCGAGGTTTCGACGCGTAGTTGGCGTTTTT
GGTCACGGCCGTTTCGGCGACGCTGGTCTTCAAAGCTTGCGCTTGGTTTG
GTAACACGCCCCTTTGCATAGAGTCTTTCGCGCGCTTAACCCAAACCGCT
ACCGACTCCATCTCTCAAGTGTCAAGCTGCCATGGAACCCGAGCCCCCGC
CCCCCCACCATTCCCCAAAGTGCAGGCGTTGTGGGTTGCCCAAGCCCTGC
ACGACCTCGCCAGTGTCGTTCGTCCCGTCTCTCCGGCCCGTGCGTGCACC
CTCTACCTGGAAGCCCTCAAGCTCCTCGAGGGCACGCGGGGCGTCAACCA
CTTCCTGACGGCCCCCACCCTCGCGAAGCTCGGTAGTCTTTTAGGGGACA
GCCTGGTGGCAAAGGCAAACATCAGACCGGCACCCGCTGCCCGGCGGGCC
CAGGACCAGCCGGTGTTGCTCGGGCCGAGGGCCTAGCGGAGGTGAGGAAA
CAAGCTCATTGCGGGTGTCATCTCCCGTTGTAATATCGTAATATTGTAAT
ATTGTAATTGCTTTTGCTCTTTCTCTATGTCGGTGTTTTGTTTTTTTGTT
GCCTTTCTCCCGATTTTTTTTTTTTCTTCTCCTTCTTCGCGAGAAATCAC
CCGTTTGTCGCTCTCCCAAAACGATTTGTTCCCGCCTTGTTTTCACGCTG
CAACGGCGCACAGGCCGTGTGCGCTCCTGCGGGGTGTGGCGATACCTCGA
TGGCAGAAGCCGTTGCCGCGGCGGCCGGGGGCGAGTGGGACGCCAAGAGG
GCGGAGGAGATGATCAAGCGAGCGGTGCTTATCCAGGGCAGGAATCTAGG
GCTGAGGCATCCAGCGGTAGCCTCGAGCATGACCGCAATGGCGGAGCTCT
ACCGGAAGCAGGGAAGGCTGGCGGAGGCGGAGCCGCTTTTCCGGAGGGCG
ATCAGCATCTGGGAGGTGTCACCGGGTCCGATGGATTCCGAAGCCGTGGC
CGCGCTGCATGGCACGGCACACTGTGTGCTGGCCGGGGCAGGAGCGGACT
GGATGGGCAGGTTCGAGGAGGCTTTCGATCTGGTTGATCAGGCCTACCGA
ATCTCTTCGTCGCACCCGGGGAAGTGAGTGTCCTTGCCGCCTTTGTCGGC
ATCGGGTACCGGAAGCCTTGGGCAATGGCGACCGCTCTCGTTGTTAGTAA
CCTATCACCCCTCCTACCATGCGTGTTATCCCGTTTGTTTTGTCCTCACT
AGGCCATTTTCCTTTGCTGTTTTTGCTCACGACGTTGGCTTTCCGCGCAC
ACGCCGTCCCTTTACCCTTGGCACAACAGCGACGCGTCTTCCCGACTTCT
TCTGGAGGCTTTGCGTATGATACGCTCGCGCCAGAGACAGGGCCGGGGAG
ACCCTCAACCGGCATCCGCGGCAATCATGGCAGGCGTATGGGAAGGTCGT
TGGGATCCCTCCAAAAACGCCGACGGCGTTGACGAAGGCGGCGGCGGCAG
CGGGGGCAAACCAGCACACGCGAGAAACCGTAGCGGGAGCGGCGACAATC
CGCGCTGCGCCGTGTGCCTCGAAGAGGTTGGCGGCGGTGAGGAGGAGGAG
ATAGGACAGAAGGTTGGAGGGCTAACAGGGTTTGGAGCCACTGGAGACTG
GACGGCCGACATCGGGTCAAAGGAGGCGTTTCGCACGGAGACGGAGAACG
TGCACGCGAGGGGGAGCTTTGCTTATCTCCCGTGCGGTCACCGCTTCCAC
ACGAACTGGTAAGCGAGTCTGAGGGTGATCAAATCCGGTGTTGGTAGCGA
CGCTCTTCGGGGAAGGCAAAACTTTTGTGGGCCGATCTCGGAACACATGT
TTGTTGGGTTTCATGAATGATCGAAGCATACGCAGCAGGGGGGTTACTTT
GCATTGCATTCCCCTCATGTAGGTTCTGTTTTGGACGTAGTGGACACGCT
GGCATTTCGAAGGTTCAAAACATCAACAACAAGCTCGAAGAGACGAGCTG
GCGGTGTCCATGACGAGGCCTACCTCTCGGCCTCCGCCGAACCGCCTCCC
GCTCCTTCTTCGCGCAGTGTCTCCCTCCACCTGCAGGAGCTTCTGCAGTA
CGTCATTCCTTCCCGTCCTCTCGTCCTCTCGCATGTAGTATGTAACATGT
AGTGTACCGACTCTTGTAGGGAGCTTGGAACACCGCTACCGTCTGACGAT
GACGATGACGATGACGATAATCTTGTACCTTTTCTTGCCTCCGGTCTCTT
GTACCTTTTCTTGCCTCTTTTTCTGCTCCGTGCGTCGCCTGATGCGAAGC
ATCGGGCGCTGGTTGGCGCACAGCTCTTCCTGCCCTTCTTGCCGCAGCCG
ACTAGTGGACGAGGAGGAGACCACCGCAAGCTCTTCCCCCTCTGCCCCTA
GTTCCCCCGCCACCGACGGTGCTAGCGGTCCTTCTCCACAGGCGGCGAGC
ACGGCAGCGGCACGCGGAGCACGGGACGACTCTCCGGCTGCCCAGTCCGA
GGGCGATGGTGGTCAGGGTGGCGGTGGAAGGACTGCAACAGCTTCTAGCA
GTAACAGCGGCTGGGGGGTGGGGCAAGGCCGAGGAGAAGACGTCGGCGGA
TGGGGGGCCGTGAGTTCGCCGGAGGAACGGGCACCGTTTTGTTGAACTAC
AGTAGGTGATTTTTTTTGGATGGCAACCTCGGTTGGCTTGTTCGCGGGCC
AGTATTTAAGCCTTTCTTTTGGGATGCTGGAGGGGAGGGGGGGATTATGG
ATTTTGGCTCTATTTTGTGGAGGTATTTTTGGAGTTGCGTGAGTAGGAAC
TTCGTCGGAGGTTGCAGAAAAAGAGACGAGCGGAAGGGGTGGGGGCTTCG
CCGGTATGACGGGCGGGATGGGCGGCGGCACGTTGTTGTAATGGGGGGCT
GGAAGAAGTGGTACGGGAGGTGTATTGAGATGTTAGAATGAAGATGGAGA
GAGGGGCGGGGGGGTCTTGGCACGCCAATTGAATTCATGGAAAAAAGGTT
CCTGAATTTTTCCAGAAACTTGTTCTTGGGTGTTCTGCGCCTCTCCGTGT
GTGGTGTTCAAGTTACCCCACCCTAGTATAGCTTTGGATACCTTGGATTC
CTATCCTTTCACCCCGTGTGTACTTATTCGTTGGATTAACTTCTTTCCTG
CATCGATGGGAAGATTGGTATTGGTTTGTGTCTCTTGGGTGGCTGCAGTT
TCCGGGGCCCTTAGAACAGGACGGTGTACGTACCTACCTCTTTGGGGAGG
AGGTAGCATCAAGTCAGACGAAGCGTTTTGTTTGGGAAACGTTGGTGTTT
GTTGTTTGTGGAACCGAGTTTTGAGTGGGTTCGCAGGTGGTGGCGCTGCG
ACGAATGTTTGTTGCCTCAATGTTTCAGCCTCAAGAATGGCTTCTCTCTT
CGGGTGCTTTTTTAGTTTACTTCAGTACTTCAGAGAAAAACAACCCTTTG
TTTCTGGGGCGCCAGGCGCTTTTTTTGTGTCTTTTTTTTCAGGGATGGAT
ATTGCCTACTGCCGCATTACCGGAAAGCGGAGGTGTTACCCGTACACACC
GCATCATAGGGGTCATTTATGAACCAACCCCGGGTTTCCGTTGTTTCTCC
TCTAGATCGGTGTTATCAGCGTGTTGGCCCCCACGAACTACCCAAAATGC
CTCTCGTGAGTCTCCACAATCACTCGCATGTTTATTGTTATTGTTATTGT
GTTGCACATTCAATTCGTACTCTCGGTGGTTCGCATTTAGAACCAATAAA
ATATCGAGTATTCTGGGCTGTCCAGCCAACCCACAAGAGGAGTTGAAATC
GTGTGTGTAAAATAGAAAAAGGGACTCCACATGATGGACTGGAGCGGGAG
GGATGGGAATTTGTTCCCGCGGGAAAAATTGCAGCTTTTGTGTCACCGGA
GATCACCGGTGTCGGTCAGGGAATACCCATCCCTGCTTCTGTGTAGACCG
TACGCTACAATGCATTTTGTGTGTAGGGTGTGGTGAGGACTATCCCTTGT
CGGTTGGTGGCATTATTTGTGGTTGGGGGCTAAGATATGGCGTGCATCCG
TTTAGCACGGTCGCAGACGCTGCTGCTCTGTTGGCGTGTTGATTTCTGAG
GCGTCTGGAGTATGTTATGTCTCCGTGAAAACCTTGCTGCACGTTGTCAA
AGACCCACTAGTAGTAGTCCGACTAGGGTGACATACTTCGAAGTATGTAG
ATGCGGCTATCGCGATCCCAGCACTACGTTAAAAATACATTACAACCGGC
AGGAGTGCTGTACAAGTTCAGGGCTTAAAGGTTCTCTAACTTGGATGCCA
GAGAGAAGCTGACGCCGTATGTTCCCGCTATTTTTGTGAACCACCGTCTA
TCCTTGTGCCCGTGACAATTGCACAAAGAAGGAAATCGAGG back to topCoding sequence (CDS) from alignment at P-lacustris_contig104:48599..58439- >mRNA_P-lacustris_contig104.402.1 ID=mRNA_P-lacustris_contig104.402.1|Name=mRNA_P-lacustris_contig104.402.1|organism=Pleurocladia lacustris SAG_25_93|type=CDS|length=3504bp|location=Sequence derived from alignment at P-lacustris_contig104:48599..58439- (Pleurocladia lacustris SAG_25_93) ATGACGACGGCGAGGGTTGAACAAGTGGAAACTGGTGACGATGGCCCGGC AACCTCTTCCGCTTCTCTCCTCGTGCTTGAGGAGAAGGCTGGGCGGCTGT TCAGACGCTGCCGGTATGACGACGCAGCGAACGCTTTTCAAACGCTGGTC GACGCGGCTCAAGTTCAACAAGAGACCACAGCAGAGCAAGAGAGGGGCTG GAATGATGACACGAGCATGAACGCCGGGAGCTACTCCACGGAGATTAGGG CGTTGGAAGGCCTCGCCGTCTGCCTCAGCCGTCAGCTTGAATGACGACGG CGAGGGTTGAACAAGTGGAAACTGGTGACGATGGCCCGGCAACCTCTTCC GCTTCTCTCCTCGTGCTTGAGGAGAAGGCTGGGCGGCTGTTCAGACGCTG CCGGTATGACGACGCAGCGAACGCTTTTCAAACGCTGGTCGACGCGGCTC AAGTTCAACAAGAGACCACAGCAGAGCAAGAGAGGGGCTGGAATGATGAC ACGAGCATGAACGCCGGGAGCTACTCCACGGAGATTAGGGCGTTGGAAGG CCTCGCCGTCTGCCTCAGCCGTCAGCTTGACGATGCCGGCGCGGAGGCCA CACAGCGAAAAGCTCTGGCCCTGAGGTGTCGGGCATGGGAAGGCGGCTCG GGAGTCGTGTCTACTGGGGAAAGGTCGCGGTCTAGGTCAGTGGGTTCTGG TTCTGGTTCTGGTTGTGTTTCGGGCTTGGACCCGTCGAAGGTGATGGAGG CAAAGCGAGCCGCGCTGCCGTGCCTGCGCAACCTGGCTAACTTCATCTCC AACCAGGGAAGGCATGCGGACGCCGAAGTTGTACTGCGATGCCGGCGCGG AGGCCACACAGCGAAAAGCTCTGGCCCTGAGGTGTCGGGCATGGGAAGGC GGCTCGGGAGTCGTGTCTACTGGGGAAAGGTCGCGGTCTAGGTCAGTGGG TTCTGGTTCTGGTTCTGGTTGTGTTTCGGGCTTGGACCCGTCGAAGGTGA TGGAGGCAAAGCGAGCCGCGCTGCCGTGCCTGCGCAACCTGGCTAACTTC ATCTCCAACCAGGGAAGGCATGCGGACGCCGAAGTTGTACTGCGCACAGT GCTCAACACCCTCGAAGACTACAATGAAGAGCTTAGCAAGGGTAGTCAGC GCCGCGACGCCAAGGACAAGGACGGGGTTGAAGGCGGCAAGTCCGTGCGC GACTCAGTACCGGCGTGTCCAGACGGCGAGGAAGGCTCGGACGTCGACCC TGCCGCCGCCGCCGCCGCCTCTTCCCTGGACACGCGGCGTTTGTCCCTGT CGACGTCCGAGACCTCTAGCAGTACCACCACCACCAGCAGGGGCAGTGAC GGTGCAGACGCAGTTCAACCGAGTGCGAGACAGCCGTTGTTAGGGATGGT GGAAGCCAAGGGAGGCACCGCTACACTAGATGCCAGACGCATAATTATTG CTAGGGGTGGCGGCTCTTCCAACAACGCCGGGAGTGGCGGGCACGAGCGC GAGAACGGGAGCTTTACGCCGGGACTGGGACAGCGGTCGTCAAGTGTCCA AGCCGCAGGCGATAGCGCAGGCGGAACTGTGCACCACGGGGGTACTACCG CACAAGCGACTGCGGCGCTGGCGGCAGAAACAGCGACAACGGCGATAAAA GCGGCCACAGGAGCGGCGGTTGTGAATTCAGCGACGGCGATGGGGAGGTC CTTCCCCACTCGCATGGCTTCCCCCGCCCCTCCACCACCCTCCCCATTCC CGCAAATAGGCAACGCGACGCCGACAGGACGACCCGCACAGTGCTCAACA CCCTCGAAGACTACAATGAAGAGCTTAGCAAGGGTAGTCAGCGCCGCGAC GCCAAGGACAAGGACGGGGTTGAAGGCGGCAAGTCCGTGCGCGACTCAGT ACCGGCGTGTCCAGACGGCGAGGAAGGCTCGGACGTCGACCCTGCCGCCG CCGCCGCCGCCTCTTCCCTGGACACGCGGCGTTTGTCCCTGTCGACGTCC GAGACCTCTAGCAGTACCACCACCACCAGCAGGGGCAGTGACGGTGCAGA CGCAGTTCAACCGAGTGCGAGACAGCCGTTGTTAGGGATGGTGGAAGCCA AGGGAGGCACCGCTACACTAGATGCCAGACGCATAATTATTGCTAGGGGT GGCGGCTCTTCCAACAACGCCGGGAGTGGCGGGCACGAGCGCGAGAACGG GAGCTTTACGCCGGGACTGGGACAGCGGTCGTCAAGTGTCCAAGCCGCAG GCGATAGCGCAGGCGGAACTGTGCACCACGGGGGTACTACCGCACAAGCG ACTGCGGCGCTGGCGGCAGAAACAGCGACAACGGCGATAAAAGCGGCCAC AGGAGCGGCGGTTGTGAATTCAGCGACGGCGATGGGGAGGTCCTTCCCCA CTCGCATGGCTTCCCCCGCCCCTCCACCACCCTCCCCATTCCCGCAAATA GGCAACGCGACGCCGACAGGACGACCCAGCGGTGAGCTCGAGGAAGGTAG GCTCTCCAGGACGAAGTCTGGTGGCGACAGCGAGGGGCATCGCGGAGGTG GCGTCGTCGAGCGAGACTTGGACAGCATTGAAGGAGGGGACAATGAAGAT CCGCAGCAGATGGCGGCGGTGACGAGGCACCTCCTTGCCGTTGTCGTTCA CGCACAGCAGCGGTGAGCTCGAGGAAGGTAGGCTCTCCAGGACGAAGTCT GGTGGCGACAGCGAGGGGCATCGCGGAGGTGGCGTCGTCGAGCGAGACTT GGACAGCATTGAAGGAGGGGACAATGAAGATCCGCAGCAGATGGCGGCGG TGACGAGGCACCTCCTTGCCGTTGTCGTTCACGCACAGGGTCGGGTGTCC GAGGCCGAGCTGCTTTTGGAGGACAGCATTCGCGCCCTCAAACGGAGAAA TCCGCCGCAGGGTCGGGTGTCCGAGGCCGAGCTGCTTTTGGAGGACAGCA TTCGCGCCCTCAAACGGAGAAATCCGCCGCAGGCGTTGTGGGTTGCCCAA GCCCTGCACGACCTCGCCAGTGTCGTTCGTCCCGTCTCTCCGGCCCGTGC GTGCACCCTCTACCTGGAAGCCCTCAAGCTCCTCGAGGGCACGCGGGGCG TCAACCACTTCCTGACGGCCCCCACCCTCGCGAAGCTCGGTAGTCTTTTA GGGGACAGCCTGGTGGCAAAGGCAAACATCAGACCGGCACCCGCTGCCCG GCGGGCCCAGGACCAGCCGGTGTTGCTCGGGCCGAGGGCCTAGGCGTTGT GGGTTGCCCAAGCCCTGCACGACCTCGCCAGTGTCGTTCGTCCCGTCTCT CCGGCCCGTGCGTGCACCCTCTACCTGGAAGCCCTCAAGCTCCTCGAGGG CACGCGGGGCGTCAACCACTTCCTGACGGCCCCCACCCTCGCGAAGCTCG GTAGTCTTTTAGGGGACAGCCTGGTGGCAAAGGCAAACATCAGACCGGCA CCCGCTGCCCGGCGGGCCCAGGACCAGCCGGTGTTGCTCGGGCCGAGGGC CTAG back to top
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