mRNA_P-lacustris_contig1039.396.1 (mRNA) Pleurocladia lacustris SAG_25_93

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-lacustris_contig1039.396.1
Unique NamemRNA_P-lacustris_contig1039.396.1
TypemRNA
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Homology
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BLAST of mRNA_P-lacustris_contig1039.396.1 vs. uniprot
Match: D7FUR2_ECTSI (Light harvesting complex protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FUR2_ECTSI)

HSP 1 Score: 350 bits (899), Expect = 3.430e-113
Identity = 175/196 (89.29%), Postives = 183/196 (93.37%), Query Frame = 1 
Query:    1 MKSFAVAAASLCALAPASAFVPGA-LPLAGVRSTPSKLSMAATPERSISIPIDPYPEGLDGEMVGDVGFDPAGFANNPPAWVQGPGTGTAARVRWYREAEIAHGRVAMLAALGWIFPEIYHFPGNSVLGADRFAEMNPLLAYAKIPNAGGIQIVTTLLILETIRLNRSIRNESGVPGDIGLGQGEGRWNPFGFNYT 585
            MKSF  AA SLCALAPASAFVPGA LPLAGVRS PSKL+MAATPERSISIPIDPYPEGLDGEMVGDVGFDPAGFANNPP+WVQG GTGTAARV+WYREAE+AHGRVAMLAA GWIFPEIYHFPGN+VLG DRFAEMNPLLAY  IPNAGGIQIV T+LILETIRLNRSIR++SGV GDIGLGQGEGRWNPF FNYT
Sbjct:    1 MKSFVAAATSLCALAPASAFVPGASLPLAGVRSAPSKLAMAATPERSISIPIDPYPEGLDGEMVGDVGFDPAGFANNPPSWVQGEGTGTAARVKWYREAELAHGRVAMLAAAGWIFPEIYHFPGNTVLGPDRFAEMNPLLAYDNIPNAGGIQIVVTILILETIRLNRSIRSDSGVAGDIGLGQGEGRWNPFNFNYT 196
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BLAST of mRNA_P-lacustris_contig1039.396.1 vs. uniprot
Match: A0A836CAI0_9STRA (Light harvesting complex protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAI0_9STRA)

HSP 1 Score: 184 bits (467), Expect = 6.430e-50
Identity = 100/184 (54.35%), Postives = 124/184 (67.39%), Query Frame = 1 
Query:   37 ALAPASAFVPGALPLAGVRSTPSKLSMAATPERSISIPIDPYPEGLDGEMVGDVGFDPAGFANNPP-AWVQGPGTGTAARVRWYREAEIAHGRVAMLAALGWIFPEIYHFPGNSVLGADRFAEMNPLLAYAKIPNAGGIQIVTTLLILETIRLNRSIRNESGVPGDIGLGQGEGRWNPFGFNYT 585
            A+APA+AF+P + P+A  + +  K+      ERS +IP D  PE LDG +VGDVGFDPAGF+NNPP AW+ G   G    ++WYREAEI HGR AMLAALGWI PE  HFPGN  +G D FA+ NP  A   +P+AG  QI  T+  +E  R+NR +R  +  PGD+GLGQG    NPFGFNYT
Sbjct:   10 AVAPAAAFLPVSAPVAPAQGSVMKM----VSERSTAIPFDKRPENLDGSLVGDVGFDPAGFSNNPPRAWLIG---GEGRSLKWYREAEIVHGRTAMLAALGWIVPEFVHFPGNEQVGVDAFAKTNPWDALYSVPDAGLWQIAATIFAVEVFRINRVVRGGA-EPGDLGLGQGG--LNPFGFNYT 183
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BLAST of mRNA_P-lacustris_contig1039.396.1 vs. uniprot
Match: A0A835YWE6_9STRA (Light harvesting complex protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWE6_9STRA)

HSP 1 Score: 184 bits (466), Expect = 8.150e-50
Identity = 108/197 (54.82%), Postives = 132/197 (67.01%), Query Frame = 1 
Query:   13 AVAAASLCALAPASAFVPGALPLAGVRSTPSKLSMAATPERSISIPIDPYPEGLDGEMVGDVGFDPAGFANNPP-AWVQGPGTGTAARVRWYREAEIAHGRVAMLAALGWIFPEIYHFPGNSVLGADRFAEMNPLLAYAKIPNAGGIQIVTTLLILETIRLNRSIRNESGVPGDIGLGQGEGRWNPFGFNYTPRSTR 600
            AVAA +L A APA+AFVP   P+A    TPSK+ + A  ERS +IP D  PE LDG +VGDVGFDPAGF+NNPP AW+ G   G    ++WYREAEI HGR AMLAALGW+ PE  HFPGN  +G D FA+ NP  A   +P+AG  QI  T+  +E  R+NR +R +   PGD+GLGQG    NPFGF+Y+    R
Sbjct:    3 AVAALALLA-APAAAFVP-VTPVA----TPSKVVLQA--ERSTAIPFDKRPENLDGTLVGDVGFDPAGFSNNPPRAWLIG---GEGRSLKWYREAEIVHGRTAMLAALGWVVPEFVHFPGNEAVGVDAFAKTNPWEALYSVPDAGLWQIAATIFAVEVYRINRVVRGDK-EPGDLGLGQGG--LNPFGFDYSEEQYR 185
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BLAST of mRNA_P-lacustris_contig1039.396.1 vs. uniprot
Match: W7TTD7_9STRA (Light-harvesting protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TTD7_9STRA)

HSP 1 Score: 184 bits (466), Expect = 3.610e-49
Identity = 98/180 (54.44%), Postives = 119/180 (66.11%), Query Frame = 1 
Query:   49 ASAFVPGALPLAGVRSTPSKLSMAATPERSISIPIDPYPEGLDGEMVGDVGFDPAGFANNPPA-WVQGPGTGTAARVRWYREAEIAHGRVAMLAALGWIFPEIYHFPGNSVLGADRFAEMNPLLAYAKIPNAGGIQIVTTLLILETIRLNRSIRNESGVPGDIGLGQGEGRWNPFGFNYT 585
            ASAF+    PLA  R     + MAA  + S ++P D  P  LDG + GDVGFDP GF+NNPP  W+ G   G+   ++WYREAEI HGRVAMLAALGW+FP IYH PGN  +G D FA +NP  A   +P AG  QI  T+  +E  R+NR IR +    GD+GLGQGEGRWNPFGFNY+
Sbjct:   59 ASAFI-APTPLA--RRATGAVRMAADDDLSTALPFDKRPPNLDGSLPGDVGFDPVGFSNNPPRPWLIG---GSGRSLKWYREAEIVHGRVAMLAALGWVFPNIYHLPGNEDVGVDAFANLNPFGALTTVPAAGLWQIAATVGAIELFRVNRVIRGDKEA-GDLGLGQGEGRWNPFGFNYS 231
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BLAST of mRNA_P-lacustris_contig1039.396.1 vs. uniprot
Match: A0A0G4H236_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4H236_9ALVE)

HSP 1 Score: 179 bits (454), Expect = 2.160e-47
Identity = 91/168 (54.17%), Postives = 111/168 (66.07%), Query Frame = 1 
Query:  115 MAATPERSISIPIDPYPEGLDGEMVGDVGFDPAGFANN-PPAWVQGPGTGTAARVRWYREAEIAHGRVAMLAALGWIFPEIYHFPGNSVLGADRFAEMNPLLAYAKIPNAGGIQIVTTLLILETIRLNRSIRNESGVPGDIGLGQGEGRWNPFGFNYTPRSTRRSSCR 615
            M+   +RSI++P D YP GLDG + GD GFDPAGF NN P  W+ G   G    ++WYREAEI H RVAMLA LGWIFPEI HF GN+ +G D FAE+NPL A    P AG +QI   +  LE  R+ R I+ ++   GD+GLGQGEGRWNPF FNY+P   +    R
Sbjct:   91 MSDNGDRSIALPFDKYPPGLDGTLAGDYGFDPAGFTNNLPRQWLIG---GEERSLKWYREAEITHARVAMLATLGWIFPEIAHFGGNAQVGQDAFAELNPLKAIYTAPAAGLVQIAFGIFALEYFRIKRVIQGDAAA-GDLGLGQGEGRWNPFKFNYSPEEYKTMQTR 254
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BLAST of mRNA_P-lacustris_contig1039.396.1 vs. uniprot
Match: A0A6V1NAG2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NAG2_HETAK)

HSP 1 Score: 176 bits (445), Expect = 9.640e-47
Identity = 95/171 (55.56%), Postives = 113/171 (66.08%), Query Frame = 1 
Query:   76 PLAGVRSTPSKLSMAATPERSISIPIDPYPEGLDGEMVGDVGFDPAGFANNPPA-WVQGPGTGTAARVRWYREAEIAHGRVAMLAALGWIFPE-IYHFPGNSVLGADRFAEMNPLLAYAKIPNAGGIQIVTTLLILETIRLNRSIRNESGVPGDIGLGQGEGRWNPFGFNY 582
            PL  V ++ S LSM    ERS ++P+DPYPEGLDG M GDVGFDPAGFANNPP  W+ G G  +   + WYREAE+AHGRVAMLA +GW FPE  YHFPGN + G D FAE NP+ A +  P  G IQI   +  +E  R+   IR +   PGD+ LGQ  G  NPFG NY
Sbjct:   23 PLKNVATSTSSLSMMQG-ERSKALPMDPYPEGLDGTMAGDVGFDPAGFANNPPKKWLYGGGENS---LDWYREAELAHGRVAMLATVGWFFPETFYHFPGNEIYGQDIFAEANPIKALSVAPAGGLIQIALVIFFVEVWRIKNVIRGDR-APGDLNLGQ-RGAINPFGLNY 187
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BLAST of mRNA_P-lacustris_contig1039.396.1 vs. uniprot
Match: A0A0G4ELJ2_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4ELJ2_VITBC)

HSP 1 Score: 173 bits (438), Expect = 1.280e-45
Identity = 100/195 (51.28%), Postives = 125/195 (64.10%), Query Frame = 1 
Query:   16 VAAASLCALAPASAFVP-GAL----PLAGVRSTPSKLSMAATPERSISIPIDPYPEGLDGEMVGDVGFDPAGFANN-PPAWVQGPGTGTAARVRWYREAEIAHGRVAMLAALGWIFPEIYHFPGNSVLGADRFAEMNPLLAYAKIPNAGGIQIVTTLLILETIRLNRSIRNESGVPGDIGLGQGEGRWNPFGFNY 582
            VAA +L A+  A+AFVP G L    PL    + PS   M  + +RS+++P+D  P  LDG + GD GFDP GF+NN P  W+ G   G    ++WYREAE+ H RVAMLAALGWIFPEI+H PGN+ +G D FAE NP  A   +P  G  QI  T+  +E  RL R +R E    GD+GLGQGEGRWNPFGF +
Sbjct:    5 VAAVALLAVC-ANAFVPQGVLKRDSPLRKSLTRPSMAEMGES-DRSLALPMDKRPPNLDGSLPGDFGFDPVGFSNNLPRTWLIG---GDERSLKWYREAELVHSRVAMLAALGWIFPEIWHLPGNAAVGVDAFAETNPWKALTTVPKEGLWQIAGTVSAIEFFRLRRVVRGEKEA-GDLGLGQGEGRWNPFGFAF 193
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BLAST of mRNA_P-lacustris_contig1039.396.1 vs. uniprot
Match: F0Y1D8_AURAN (Uncharacterized protein LHC9 n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y1D8_AURAN)

HSP 1 Score: 156 bits (395), Expect = 8.170e-40
Identity = 86/172 (50.00%), Postives = 113/172 (65.70%), Query Frame = 1 
Query:   85 GVRSTPSKLSMAATPERSISIPIDPYP---EGLDGEMVGDVGFDPAGFANNPP-AWVQGP-GTGTAARVRWYREAEIAHGRVAMLAALGWIFPEIYHFPGNSVLGADRFAEMNPLLAYAKIPNAGGIQIVTTLLILETIRLNRSIRNESGVPGDIGLGQGEGRWNPFGFNYT 585
            G +  P+K +   +     SIP    P     LDG +VGDVGFDP GF+   P AW QG  G G+   ++ +REAE+ HGR+A LA LGWIFPE+YHFPG      D FA+MNP  A   IP+AG +QI+  +  LE +R+NR +++ + +PGD+GLGQGEGRWNPFGF+YT
Sbjct:   20 GGKKAPAKAAAPVSRGTGPSIPSIALPWTETNLDGSLVGDVGFDPLGFSKYAPGAWWQGDEGDGS---LKIFREAELMHGRIAQLACLGWIFPELYHFPGKD----DAFAKMNPYEAVDAIPSAGWLQILAFMSSLEILRVNR-LKDPAYIPGDLGLGQGEGRWNPFGFDYT 183
[Close]
BLAST of mRNA_P-lacustris_contig1039.396.1 vs. uniprot
Match: A0A6S8TQ14_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A6S8TQ14_9STRA)

HSP 1 Score: 150 bits (379), Expect = 1.480e-37
Identity = 94/192 (48.96%), Postives = 120/192 (62.50%), Query Frame = 1 
Query:   37 ALAPASAFVPGAL------PLAGVRSTPSKLSMAATPERSISIPIDPYPEGLDGEMVGDVGFDPAGFANNPP-AWVQGP-GTGTAARVRWYREAEIAHGRVAMLAALGWIFPEIYHFPGNSVLGADRFAEMNPLLAYAKIPNAGGIQIVTTLLILETIRLNRSIRNESGVPGDIGLGQGEGRWNPFGFNYTP 588
            ALAPA+AF  G +      P     + P K S  A P  S+++P       LDG +VGDVGFDP GF+   P AW QG  G G+   ++ +REAE+ HGR+A LA LGW+FPEI HFPG    GA  F +MNP  A   IPNAG  QI+  +  LE  R+N+ +++ + VPGD+ LGQG GRWNPFGF+YTP
Sbjct:   10 ALAPAAAFNFGDILKKKSAPKPAAPAAPQKSSGGAYP--SVALPFTTT--NLDGSLVGDVGFDPLGFSKYAPGAWWQGDEGDGS---LKIFREAELMHGRIAQLACLGWVFPEIAHFPGKD--GA--FGKMNPFEAVDAIPNAGWYQILAFMASLEVYRVNK-LKDPAYVPGDLSLGQGPGRWNPFGFDYTP 189
[Close]
BLAST of mRNA_P-lacustris_contig1039.396.1 vs. uniprot
Match: A0A6S8TCV5_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A6S8TCV5_9STRA)

HSP 1 Score: 148 bits (373), Expect = 8.890e-37
Identity = 88/195 (45.13%), Postives = 117/195 (60.00%), Query Frame = 1 
Query:   28 SLCALAPASAFVPGALPLAGVRSTPS--KLSMAATPERSISIPIDPYPEGLDGEMVGDVGFDPAGFANNPPA--WVQGPGTGTAARVRWYREAEIAHGRVAMLAALGWIFPEIYHFPGNSVLGADRFAEMNPLLAYAKIPNAGGIQIVTTLLILETIRLNRSIRNESGVPGDIGLGQGEGRWNPFGFNYTPRSTR 600
            +LC  APA+ F  G     G ++ P   K S +     S+++P    P  LDG +VGDVGFDP GF+   P   WV   G G+   ++ +REAE+ HGR+A LA LGW+FPEI H+PG      + F +MNP  A   IP AG  QI+  ++  E  R+N+ +++ S +PGD GLGQG GRWNPFGFNYTP   R
Sbjct:    6 ALCLAAPAAGFGFGKK---GAKAAPKAQKRSSSGAQYPSVALPWTTTP--LDGSLVGDVGFDPLGFSKYAPGAWWVGDEGDGS---LKIFREAELMHGRIAQLACLGWVFPEIAHWPGKD----NAFGKMNPFDALDAIPKAGWYQILGFMVACEVWRINK-LKDPSYMPGDSGLGQGPGRWNPFGFNYTPEEYR 187
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig1039.396.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FUR2_ECTSI3.430e-11389.29Light harvesting complex protein n=2 Tax=Ectocarpu... [more]
A0A836CAI0_9STRA6.430e-5054.35Light harvesting complex protein n=1 Tax=Tribonema... [more]
A0A835YWE6_9STRA8.150e-5054.82Light harvesting complex protein n=1 Tax=Tribonema... [more]
W7TTD7_9STRA3.610e-4954.44Light-harvesting protein n=3 Tax=Monodopsidaceae T... [more]
A0A0G4H236_9ALVE2.160e-4754.17Uncharacterized protein n=1 Tax=Chromera velia CCM... [more]
A0A6V1NAG2_HETAK9.640e-4755.56Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A0G4ELJ2_VITBC1.280e-4551.28Uncharacterized protein n=2 Tax=Vitrella brassicaf... [more]
F0Y1D8_AURAN8.170e-4050.00Uncharacterized protein LHC9 n=1 Tax=Aureococcus a... [more]
A0A6S8TQ14_9STRA1.480e-3748.96Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A6S8TCV5_9STRA8.890e-3745.13Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig1039contigP-lacustris_contig1039:62629..70388 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score355.5
Seed ortholog evalue1.6e-95
Seed eggNOG ortholog2880.D7FUR2
Preferred nameLhca6
KEGG koko:K08908
KEGG Pathwayko00196,map00196
Hectar predicted targeting categorychloroplast
GOsGO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006091,GO:0008150,GO:0008152,GO:0009314,GO:0009416,GO:0009507,GO:0009526,GO:0009532,GO:0009534,GO:0009535,GO:0009536,GO:0009570,GO:0009579,GO:0009628,GO:0009637,GO:0009639,GO:0009765,GO:0009768,GO:0009941,GO:0009987,GO:0010114,GO:0010218,GO:0010287,GO:0015979,GO:0016020,GO:0016168,GO:0019684,GO:0031409,GO:0031967,GO:0031975,GO:0031976,GO:0031984,GO:0034357,GO:0042651,GO:0043167,GO:0043168,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044436,GO:0044444,GO:0044446,GO:0044464,GO:0046906,GO:0048037,GO:0050896,GO:0055035,GO:0097159,GO:1901363
EggNOG free text desc.photosynthesis, light harvesting
EggNOG OGs2CNEI@1,2QVPT@2759
Ec32 ortholog descriptionLight harvesting complex protein
Ec32 orthologEc-19_004240.1
COG Functional cat.P
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00194
Exons3
Model size2116
Cds size621
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig1039.396.1prot_P-lacustris_contig1039.396.1Pleurocladia lacustris SAG_25_93polypeptideP-lacustris_contig1039 67557..70388 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815307.0308936-UTR-P-lacustris_contig1039:62628..639391622815307.0308936-UTR-P-lacustris_contig1039:62628..63939Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig1039 62629..63939 -
1693493465.9970338-UTR-P-lacustris_contig1039:62628..639391693493465.9970338-UTR-P-lacustris_contig1039:62628..63939Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig1039 62629..63939 -
1622815307.0417526-UTR-P-lacustris_contig1039:67372..675561622815307.0417526-UTR-P-lacustris_contig1039:67372..67556Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig1039 67373..67556 -
1693493466.022103-UTR-P-lacustris_contig1039:67372..675561693493466.022103-UTR-P-lacustris_contig1039:67372..67556Pleurocladia lacustris SAG_25_93UTRP-lacustris_contig1039 67373..67556 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815307.051113-CDS-P-lacustris_contig1039:67556..675631622815307.051113-CDS-P-lacustris_contig1039:67556..67563Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1039 67557..67563 -
1693493466.0322406-CDS-P-lacustris_contig1039:67556..675631693493466.0322406-CDS-P-lacustris_contig1039:67556..67563Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1039 67557..67563 -
1622815307.0603116-CDS-P-lacustris_contig1039:69774..703881622815307.0603116-CDS-P-lacustris_contig1039:69774..70388Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1039 69775..70388 -
1693493466.0418382-CDS-P-lacustris_contig1039:69774..703881693493466.0418382-CDS-P-lacustris_contig1039:69774..70388Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1039 69775..70388 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-lacustris_contig1039.396.1

>prot_P-lacustris_contig1039.396.1 ID=prot_P-lacustris_contig1039.396.1|Name=mRNA_P-lacustris_contig1039.396.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=207bp
MKSFAVAAASLCALAPASAFVPGALPLAGVRSTPSKLSMAATPERSISIP
IDPYPEGLDGEMVGDVGFDPAGFANNPPAWVQGPGTGTAARVRWYREAEI
AHGRVAMLAALGWIFPEIYHFPGNSVLGADRFAEMNPLLAYAKIPNAGGI
QIVTTLLILETIRLNRSIRNESGVPGDIGLGQGEGRWNPFGFNYTPRSTR
RSSCRR*
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mRNA from alignment at P-lacustris_contig1039:62629..70388-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-lacustris_contig1039.396.1 ID=mRNA_P-lacustris_contig1039.396.1|Name=mRNA_P-lacustris_contig1039.396.1|organism=Pleurocladia lacustris SAG_25_93|type=mRNA|length=7760bp|location=Sequence derived from alignment at P-lacustris_contig1039:62629..70388- (Pleurocladia lacustris SAG_25_93)
ATGAAGTCCTTCGCAGTAGCAGCCGCCTCTCTGTGCGCCCTGGCGCCGGC
CTCGGCCTTCGTGCCGGGAGCCCTCCCCCTCGCTGGCGTGCGCAGCACAC
CCTCAAAGCTCTCCATGGCAGCAACGCCAGAGAGGTCCATCTCCATCCCC
ATCGACCCTTACCCGGAAGGCCTCGACGGCGAGATGGTGGGCGATGTGGG
CTTCGACCCCGCCGGCTTCGCGAACAACCCTCCGGCGTGGGTGCAGGGAC
CGGGCACGGGCACCGCCGCCAGGGTTAGGTGGTACCGCGAGGCCGAGATC
GCTCACGGACGCGTTGCCATGCTTGCGGCCTTGGGCTGGATTTTCCCCGA
GATCTACCACTTCCCCGGCAATTCGGTGCTCGGCGCCGATCGCTTCGCGG
AGATGAACCCTCTCCTCGCGTACGCCAAAATCCCCAATGCGGGAGGCATT
CAGATCGTGACGACCCTGCTCATCCTCGAGACAATCAGACTCAACAGGAG
CATCCGGAACGAGAGCGGTGTGCCTGGAGACATCGGGCTCGGGCAGGGGG
AGGGACGCTGGAACCCGTTCGGCTTTAACTACACCCCGAGGAGTACGCGG
AGAAGCAGCTGCAGGTGAGAGATAATACATGGGGGCTCTGATGCACACGG
CGATAAGCATTGCTGTTTTTTTCATGAGCATGTCATCGGTACCTAGTGCT
GTGTTGAGAGAGGGCTCTTTTGATTCTGTGTGTTGATAATTGAACATGCT
GAATCAGCGTGTGCGTGTGCGGGGGTCATTCAAGGCCGTGCAGCGATTGC
TCTTGTAGCGATGCGATGCTTGCCTGCTTGCCCGCCTCGAGCTAAAAAAC
TCGGATGCTACTATGTAACCCCAGAGACGTCTTCGACCGACAACAGTCCG
CACATGAGCTCATCATGCCTTGAAATAATTGGTCAAGATGCGGTTGTCAA
CAAATGGCTTTCCTGTGCGTGCATGTTTGTGCGTCATGGGTGATTCATGT
TTTATCCTCTCCCGCTGACTCAGTTCTGCAACCACTGCAAGCTTCCTTGC
GATGTCTCAAGTTCTCTCGACATGCACACACAAGCACATGCTGTACGTTA
TTGCTGTTGTCTGCATGAGGTAAATCACCAGAAATTTACTCGCTGATGTG
TTTCGTGTGAGTGTGTCGCATTGCTGCCCAGTTGCTCCCAGTTTTTACAA
AAACAGAACAGACCCATCTCTGTCTAGGATACGACGTCCGGAATAGATAT
TGCAATGGATTCATTCATGTCGTGACGGTCCAACTTCTCCAGTGATCCTA
CCACAACTACAATGACAGTTTTATCTTAGCAGGTCGTGTGGCACGGCGCA
TCTTGCTGCCTCCGCCCATAACAAACGTGCGGTAATTTTGGCGGAATAGG
CCGAGTGTGCGTGTGGTTGCGTACCGAACAAATAGCGATCATGAGCGCTT
CTGTAGAATGAGAGACGGCGGCATAACCGATCCACGCTGAACATGAACTA
TCTGCAAAACATATGTCAGCATACTGTACGAACGGCGCCCACGTTTTGTG
TGTCGGCTTTACGCAGCGCTCCCCCACCCCGCGTCGGAAATGTCTGTGTC
CACCCCTACCCTTTTAAACTACGGGCTTACGGCGGCATATAAGCATACGT
TGTTGTTGTTGCCGGAGAATCAGTGCATCCACACCCCTTCTCTGCGATGT
TTCAAAAGTTTCAGCGAAACACGCGTGTCACCACTGCCATGATGCTCGGT
GTTTTTTGTGCATAACCTCACTGCGGTAGAATCCCCAAGGTGGCAGGCTC
GATAACTTTTTTACTCTCACGTTCAATTTTTTTCATATTGTTTGTGGTTG
CCCGACCATTTCTCAAGGAGCTTGTCGTAGCGCTTGGCTGCAGTACACAC
GTGCGACCCACACACGGCGGCCCCGTGGAAAGACTGCGTTCCCTGCTATA
AAGACCAATTGTAAAAAGTCAGTGTACCCTCCTGCCGCCTCAAACCTGCG
AGCGCCAAAGTGTGGCAAGTCTCAACATCGATCATGGACCAGACGGGCTT
CGATGTATAGGAGACGAGACGATTGTTGTGTCAACTATCGATTGGTTCAC
AGTCAGTCAGGCCCTTCGCTTGACTCGTTTATAGCTAAAAGCTCGTCGAG
CGCAGCAGAAAAGGGCACAGAGAAAGAAAAACGAACAACGCTCCGTGTGG
CAACCCGTTATAACCGGCTGCCGTCGCCGAACGCTTGGAAAGCTAGCAGC
ACAACTAGCGACCTGCATGGTGAAAACACTCCCGCGTGAGGTTACGGCCT
TTGACGTTCCGAGACGCCGTCTTGCGATACACGGCGAACTGGCGGTGTTG
TGTGAGAGGTGTCCGTGTACACCGCCGAGCCCTGCGTGTCTAGGCAAGGA
TGCACGTAGCTGACATCAACCTCGACCAATTCCCTGGCGGTTGTGTTTGT
TTTGCTTTGTTCGACCCTTGCCCCCGCCAAGGTTAGAATACAAGAAAATA
AATCGTCAAGCGTAGAAATTTTCATACAGGACCTACAAAAAGTCAAAGGG
GTGGCAGATGCCGTTTTAGCCATCACTGCTGCGAAGACTAACATTGACCA
CCTGCAGGGGACTTCTCAGATGGCAGTATTATGGCAGTTTTCTTTTGATG
TTGTGTGTGTGTGTGTGTTTTTTTTTTTTAATACGCTCACGTCTTCGATA
AAGCCCTCAACTCCGTCGCAACACCCACCAAGCATGCACGTAAACCAGCG
GTAGAAACACACCTACGCCGTTGCCCGGTTTTCTCACTCAACGGCCCCCC
TCACCCTGCCCCGTACTTGCTGCAGGAGATGAAGCACGGCCGTCTCGCCA
TGATCGCGATCACTGGAATGTACTTCCAGACGATCGTCAAGGGAGAATCA
ATCCTCGCCCAGCTCGGGGAGGCCTTCTCTCTCCCGGAGAGTGTCGCCAA
GGCCGGCTACTATTTCAACCCGCTGTAAATCGAACAAGATGTGGGAGAGG
AGCTCCCAGCGACAGGGTGAGCATACCAAGGCCCCGTCATGCACGTGGTT
GATGTTTGTGATTCAAGAATGCGAACGAGGTTGAACCGACCCGCCTATAA
TCCCGAATCGCGCTAATCGCTGGCTAGAAAGCATCCATGTTTCCGCACGT
GTGATTTTGAAAGGAAGCTCATGTAGTTCCTGCCGCCAGATCCGCCGGTC
TAGAGAGGTAGGGAGAGAGAGAGAGTAGACCGGCCATCTCGGAGGAAAAA
GAAACTTTATCAAGTATCAAACACACGAGTACTGTAAGAAACACTCAAGA
ATGGTCTGTCTGTTGTGTACCCGTAGTCAAGTTTGAGTTGGCCCGTTGCG
ACTTGATCTCTTTCAGCTGTAGCTTCGGCCGTGGGGACAACCGAACAGCG
AACGGCAAGCTCATGTGTAGCCCCATTCCATCCCGCGTTCAATATATCTG
AAAAACAAGAGAAGCGCCCTTTTTTCTCGCCAGTATCACTCATTCTTGTC
CGTGATACTCAGAGGAGGTACATGTAAGGAGGAACGCAACACTAGGGTGG
ACGGTTGGCCAGCAGACTGCCGATACAGCGGCCGACCGGAGCTCTCTGAG
GGGATCCCCGTTGTGCTTGTGCACGCGCATAGATGCCACCGCAAATTTCG
ATTCTCGGCAGTAGAACCGTTTTGCGCCTCGTGTATGTTCCAGTCCGAAC
TGGAACAAGCGCAGTCCCCGGCGCCTTCCAGTCGAGACGCGAACGGTCGA
CGTGCATAAAACGCAGAACGCTTGCCACCCCAAAATCGCAAGAGTTTCGG
TGGCATCGCCTTGTACTAACACGACACGGATCACGGATCCCATCATGCCG
GCCGCCGTGTCGAAAGTCTCCCGGGGTTCGGACCACACATGGGCTCGCTG
TTAACTTGTACTTGAGGCTGAAGCTGGCTGTCAACCAAATTTTGACCACC
GATGCTCAACTACAAAGTATACCTCTTCGGTCGCTCGTCACTCACAAATA
TGGAAAATTTTGATCATCACTTTTCGGTTCTGGCCCAATGCCTCTTGCTT
TCAATGTGTGATTCCGAAGCCCTCCAAATCCCGCTCGAAAGTACACGCTA
GATTTGACTTTCAGTTACGGTAGTACAAAGATCGCACGATACACCCATGT
AGTCCAAGCATTCAAGACTCTACACACTGTAGAAGGCAAGACTAAGTTGG
AATATTGTAGGCTACACACTGTAGAAGGCCATGACTAAGGTGGAATATTG
TAGGCCATTTGTTTCGTCGTCATTCTGTGGTCTTTCGATGGGTTATTCCC
TTGGTTTTGAACGGCTTTGATAGGGTCCTTCTCGGCAGACACCCCCAATT
GATTTTGCCCAAACGGATTTTTTCACGGCGTTGATCTAAAGAGAACCTTA
GGTTATCGACAAAAGTTGAAAATCAACGCAAGATTCCAAGCATTTGGAGA
GTTTGCGCATGTGGCCTACCCGTAGTCCCTCCCCACAACATCCAAGGAAT
GCCTGTGGCCAGAGGAGGCAGAGGCAACGGCCGCAGACGTTCTCGGAGGT
GGACTTCGTTCTTGTGCACTCACCTCACCGGCAGTGTTCTCGGGACTCCC
ACTCTGTTGACATTGACAGTTGCTGGGTCCTCGAAGGAGAGGATTGGTCG
GATTCTCTCATCTCACAGGACCCAGCAATTGTCGAGAGGGTGGGAGTCTC
GAGCACAGCAGGAACGAAGTCCGCCTGCAAGAACGGCTGCGGCCGTCGTC
TGCCTCCTCTGACCACGGGCGTTTCTGGATATTGCGGGGACGAACGAGGT
TGCCAGCATTCCGGAGACATTTCTCCCGTTTGGCTACACGTGCGGTTGGA
CCCCCCTCTCCCTTTTGAAACCGTCGGTCCCCTGTTGGCAGGCTCAGGGG
GGCAGGCAGGAACAATCAAATGATACCTATATGCTTCAAAACCTCTTCAA
GACAAAAACCGCAGGAAGGGGGGATGGGGCGGTTTATTTCATCACTTCGC
GTGTGGTTAGAATGGCCATATACTAAACCATACTGTATCTAATAGGTACT
CGGAGTATTTCATAAGATTCAGAGCAGCCAAGACAAACACCGGTCTTCAT
ACAAACAGAATCTTCTCCCTGCAATTTTTTTTTTTCGACCCTTCGGGCAG
TCTGCCTCGCGAACGATCCTGAATCAGCTGTTAGTCATCCAGTTCATTGG
TGTGTCCACAGATCGCGTATTTGCTTGCTCATTTTGTAAGAGAAGTAGCC
CAAAAGCAAGTCTCGGGCCCAACATTTGCTTTTGATACACTTCTCTTGCA
AATAATGGCATTTTTCGCAAATTTTGCTTCGCTGAAAAAGTTCGAAGAGG
TTACTGCCTAATCAAGCTGAAGATATATACCCCCAGGGATGTCTTGAGCG
CTCTGCCCGCCGAAAAAAACCATAGTCAGGCTTGCGATGAAGACAACATG
TATAGATGTGTCTTCAGAGATTTTTGAGCGGCCGTCGACCGTTGCCAATT
TTGGATCACAATTGCAGCCGGAGCTGTCGAGAATATCTACGTTCCATCGT
GTGTTCATGGTGCCGTGGGGCCCGTACTGTCAAGCTTTTGCTCCCCCGCC
CAAAAAAAAGAGATGGTTTTTGTACTACACCAGGAAGCAACAGTGAGACA
TATGGAACGTCCGAGCCGACTTTTGGCTCCGGTTCTCTATGCTCAGTCCA
AGACGCACACGATTGGCGATTAATTTTTTGGTATGGCGACAATGCGCGTG
CATGCGTTCCTGGTCCGTCAGATGGCCTTTGGCATCACAAGTGCAGACCT
GCGCTGTTTCAGCGTCTCGAACGTCCTTGCGCCCCTTCATCTTTTTCCTG
ATATTTCTCCCGTTTTCTTTCCGACCCCTCGATCGTTCGGTCGGAACCAC
GAGAAAAAAAGCACTGTTGCGAACGAGTCGAGCCGAAACAAAGAAAACAC
GGGGTGTGCATATCCATATCCAGGCAAGGGGAAGGACGTTTGGGACCCTG
AAAGAGCGCACGTCTGCACTTGTGATGTCAACGCTGTGCAACATCCTCCG
TAGATTGCCATTTATTGGTGCCGGCTCAAAGGAGTTCAAGACGGAGGCCG
TGCAACGTGGTGCTGTAAACTGCTACACGTCAGCGGGAGCAAGAGTGTAC
AAAACACCGTGTAGGTTGAAGAACATCCAGAGCGGGAGGCAGTGACGCTG
ACGTTTGGATATGATACTAAATTTGAGTTGCACGCAAGCCCCGATCACAG
TTCTGTACCTTCAAGAATCAAGATTGGGCCAAATCAGCTTCGTTCCCAAG
AAGCATACGTGGCAAAATCCCCGCGGGACACCTAGGTACTCGCGAGCTTT
GTTGTGTGTCGGGGAACTGCTTGATTCTCACAGTATCCATCCATGACTTT
GTCCTCCCCTCCCATCCATCCCCTCGTCAATGGTCTTGTTCCATTCCAGG
AAGCAAAGGAATTAGACGCTATCTACGGTCGGAAGGTCTCACCGCTCTTG
GACGAGTTTTGCACCACACGGTTGTTTTATTTGCGCTTGGACTGCTGCGG
GCGGCATCAGTTGGCGTGACAATTATACGCGGGCCAAGCCGCCGGGCAGG
GGTCAGGGTCGAGGTCTCGACGCGAAACCTCTTCTCTAGGAGCATAGCAC
ACGCTTTGATGTGTGGCGTTGAATTACATTCGGCCTTTTTTATCGTGTGT
GCCCCCTCCCCCCTTGCCCCCACTCCGCCGATCGTTTGTGCTTATCGGGG
TCGTCGGAGTTTGGTAGCAAATATCGGTCCATCGGCGGTTTTTCCGTCGA
CCACCTCGTCATTGCCGCCGTGTTGGGACGGGGTTTTAAATGGGAACCTG
ATTCTTGAATTAAAGGCGGCTCCGTGCTTGCGATCCACGAAGCGCCTGCC
TGCCTGTCTGCTCTCCTTCTCGGTTGGCTCAAACTTTACGGCAGCTGCGC
TGGTTTCTGAGTGTTTTCTGATTATTTGACGCTATATCCCCCACTCGGGG
TATTTAGAATGTGGGCGTTGTTCCGTGTCCGTGGGGAGAGTAGAGGTAGA
AAATAAAGAACGTCCGTGGTTCCAGAGAAAGACGGCGCAGTCCGTGGTTT
GCATGGCACATCTCGACATTTTTTTTCGTCGGGCGCGATGGGGGGTGGGA
AAAGCTCTTTCCCCAGCTCTTTTTTATGCTGCAAGAGGAGGTGGAACGAT
GTACGCCCATCTGTGCGTTACTCTCTGCCCTGCGAGGACGGCCTGCGGCG
ATATGAGACACGTCGCAAAATTGCTCTTCGTGGGTCGGGTCGTTTTATCC
CATCCAGTGCAGCGCGTTGCATTGCATTCCTTGGCATATCTCTCAGCTGT
TTCGTGAACGCCGAAACACCTGCACAGTGACGAACAGTTCATTCGCCAAC
CCGGAAGGAATGGAAGGCGTTTTTCAGTCGAATGCATCCTAGGATATTAT
GAGGGGCTCTGGATGAAAAACCCTTCTTCCCGGCGTCGGTAGTTTACGAG
AACTTTGTTTTTGGCTGTCGTTGCCGAGGAAAAGCAGGGAGGCCAGCCGC
ACACAAAGCAATGAAGCGAAGCGAAACAATCGAGCTGATCGCATTCATTG
AAGGCTGCAGCAGCACTTGCGTGTTCGTCGTAAACATGAATAGGCAACTA
AAAGCGCTCCTTCTTTTTCCAACCATTTTTCGTTTGAGCAAGAAAGGGAA
CGCACGATCTTAACATGAACTCCAATGTGAATCCGTTTCTTCCACGCTAC
CCGATTTCAC
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Coding sequence (CDS) from alignment at P-lacustris_contig1039:62629..70388-

>mRNA_P-lacustris_contig1039.396.1 ID=mRNA_P-lacustris_contig1039.396.1|Name=mRNA_P-lacustris_contig1039.396.1|organism=Pleurocladia lacustris SAG_25_93|type=CDS|length=1242bp|location=Sequence derived from alignment at P-lacustris_contig1039:62629..70388- (Pleurocladia lacustris SAG_25_93)
ATGAAGTCCTTCGCAGTAGCAGCCGCCTCTCTGTGCGCCCTGGCGCCGGC
CTCGGCCTTCGTGCCGGGAGCCCTCCCCCTCGCTGGCGTGCGCAGCACAC
CCTCAAAGCTCTCCATGGCAGCAACGCCAGAGAGGTCCATCTCCATCCCC
ATCGACCCTTACCCGGAAGGCCTCGACGGCGAGATGGTGGGCGATGTGGG
CTTCGACCCCGCCGGCTTCGCGAACAACCCTCCGGCGTGGGTGCAGGGAC
CGGGCACGGGCACCGCCGCCAGGGTTAGGTGGTACCGCGAGGCCGAGATC
GCTCACGGACGCGTTGCCATGCTTGCGGCCTTGGGCTGGATTTTCCCCGA
GATCTACCACTTCCCCGGCAATTCGGTGCTCGGCGCCGATCGCTTCGCGG
AGATGAACCCTCTCCTCGCGTACGCCAAAATCCCCAATGCGGGAGGCATT
CAGATCGTGACGACCCTGCTCATCCTCGAGACAATCAGACTCAACAGGAG
CATCCGGAACGAGAGCGGTGTGCCTGGAGACATCGGGCTCGGGCAGGGGG
AGGGACGCTGGAACCCGTTCGGCTTTAACTACACCCCGAGGAGTACGCGG
AGAAGCAGCTGCAGATGAAGTCCTTCGCAGTAGCAGCCGCCTCTCTGTGC
GCCCTGGCGCCGGCCTCGGCCTTCGTGCCGGGAGCCCTCCCCCTCGCTGG
CGTGCGCAGCACACCCTCAAAGCTCTCCATGGCAGCAACGCCAGAGAGGT
CCATCTCCATCCCCATCGACCCTTACCCGGAAGGCCTCGACGGCGAGATG
GTGGGCGATGTGGGCTTCGACCCCGCCGGCTTCGCGAACAACCCTCCGGC
GTGGGTGCAGGGACCGGGCACGGGCACCGCCGCCAGGGTTAGGTGGTACC
GCGAGGCCGAGATCGCTCACGGACGCGTTGCCATGCTTGCGGCCTTGGGC
TGGATTTTCCCCGAGATCTACCACTTCCCCGGCAATTCGGTGCTCGGCGC
CGATCGCTTCGCGGAGATGAACCCTCTCCTCGCGTACGCCAAAATCCCCA
ATGCGGGAGGCATTCAGATCGTGACGACCCTGCTCATCCTCGAGACAATC
AGACTCAACAGGAGCATCCGGAACGAGAGCGGTGTGCCTGGAGACATCGG
GCTCGGGCAGGGGGAGGGACGCTGGAACCCGTTCGGCTTTAACTACACCC
CGAGGAGTACGCGGAGAAGCAGCTGCAGGAGATGAGAGATGA
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