mRNA_P-lacustris_contig1039.393.1 (mRNA) Pleurocladia lacustris SAG_25_93

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-lacustris_contig1039.393.1
Unique NamemRNA_P-lacustris_contig1039.393.1
TypemRNA
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Homology
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BLAST of mRNA_P-lacustris_contig1039.393.1 vs. uniprot
Match: D7FUQ9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUQ9_ECTSI)

HSP 1 Score: 250 bits (639), Expect = 1.130e-76
Identity = 212/388 (54.64%), Postives = 230/388 (59.28%), Query Frame = 1 
Query:  121 LLGTGLSSDSEDDEASGIPVLPRPPAGAEVMVSRLPNILGVKTEAFDPDTYEEEAEADEFKFTTNIIRWRHKRGSLGRPELGDDGRALRESNTRLVRWSNGSTQLLVGDEAFDVEEHSIDRSALFVQQMTEEGSVLQCQGELTKKISFKPSNVLSKAHRTLTLAVRKRAVKGSRIKKYAETVDPEQVKMERARAEEALHKQARRKHQHYNKYSNEDGSSRRRPAMNIDYLEEGAFDDTSIKAIKKNAKAGRYD-LGSSADEDDNDGSEDGNRXLEAXXXXXXXX---KAAANEVLGTDSEXXXXXXXXXXXXXXRGGAVGERKGRGRRLGGXXTRMXXXXXXXXXXXXXXXXGGRGVGKRSRASQESTPARSGKRSHRSIAEDSSESE 1272
            L GTGLSSDSED+E   IPVLPRPPA A+VM+SRLPNILGVKTEAFDPDTYEEEAEADEFKFTTNIIRWRHKRG+LGRPELGDDGRALRESNTRLV                                                                                           K ERARAEEA+HKQARRK++ Y+KYSNEDGSS RRPAMNI+YLE+GAFDD+  K ++ + +AGRYD LGSS  E D+D SED  R L+A           KA AN+VLGTDS XXXXXXXXXXXXXX                 XXTRM  XXXXXXXXXX     GR V KR  ASQ STP R GKR HRSI EDSSESE
Sbjct:   45 LGGTGLSSDSEDEE---IPVLPRPPAEADVMISRLPNILGVKTEAFDPDTYEEEAEADEFKFTTNIIRWRHKRGNLGRPELGDDGRALRESNTRLV-------------------------------------------------------------------------------------------KQERARAEEAMHKQARRKNKDYSKYSNEDGSSGRRPAMNIEYLEQGAFDDSKPKDMRDDVRAGRYDDLGSS--EMDDDESEDQERGLDAFRAEKAAKAAAKARANQVLGTDSXXXXXXXXXXXXXXXXXXXXXXXXXX---XXXXXTRMYDXXXXXXXXXXD----GRDVRKRPAASQGSTPGRGGKRLHRSITEDSSESE 329
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BLAST of mRNA_P-lacustris_contig1039.393.1 vs. uniprot
Match: A0A836CAV3_9STRA (Leo1-like protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAV3_9STRA)

HSP 1 Score: 217 bits (552), Expect = 4.090e-62
Identity = 121/251 (48.21%), Postives = 171/251 (68.13%), Query Frame = 1 
Query:  172 IPVLPRPPAGAEVMVSRLPNILGVKTEAFDPDTYEEEAEADEFKFTTNIIR----------WRHKRGSLGRPELGDDGRALRESNTRLVRWSNGSTQLLVGDEAFDVEEHSIDRSALFVQQMTEEG-SVLQCQGELTKKISFKPSNVLSKAHRTLTLAVRKRAVKGSRIKKYAETVDPEQVKMERARAEEALHKQARRKHQH---YNKYSNEDGSSRRRPAMNIDYLEEGA-FDDTSIKAIKKNAKAGRYD 879
            IP L RP   ++V V+R+PN++G+KT  FDP+T+++ AE + FKFTTNIIR          WRH++ + G  E  + G  +RE+NTRLV+WS+GS QL+VG+E FDV EH++D+S +FV+Q T EG S L+CQG L  K++FKPS + SKAHR+L LAVR R  K SRI  Y+ET+DPE VK +R R EE   K+ +R+      Y +Y   DG+  +R  M+  YLEEG  +D+T +K++K++ +  RYD
Sbjct:   91 IPELQRPTPASKVYVTRMPNVMGIKTAPFDPNTFDQVAEDETFKFTTNIIRQAYFNSLTLEWRHRKDASGALEYDEHGEPIRETNTRLVKWSDGSLQLMVGEEVFDVSEHALDKSYMFVRQKTTEGTSCLECQGRLDNKLTFKPSGLHSKAHRSLALAVRTRTQKASRIMSYSETMDPEAVKTQRVRTEEGTRKREKRRTSGAAGYPRYR--DGARGKRARMSATYLEEGVDYDETGLKSLKEDTR-NRYD 338
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BLAST of mRNA_P-lacustris_contig1039.393.1 vs. uniprot
Match: A0A7S2XRE6_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XRE6_9STRA)

HSP 1 Score: 139 bits (350), Expect = 1.060e-32
Identity = 102/291 (35.05%), Postives = 158/291 (54.30%), Query Frame = 1 
Query:  181 LPRPPAG----AEVMVSRLPNILGVKTEAFDPDTYEEEAEADEFKFTT-NIIRWRHKRGSLGRPELGDD--GRALRESNTRLVRWSNGSTQLLVGDEAFDVEEHSID--------RSALFVQQM--------------TEEGSVLQCQGELTKKISFKPSNVLSKAHRTLTLAVRKRAVKGSRIKKYAETVDPEQVKMERARAEEALHKQ-----------ARRKHQHYNKYSNEDGSSRRRPAMNIDYLEEGA---FDDTSIKAIKKNAKAGRY-DLGSSADEDDNDGSE 921
            +PRP A       + +++LPN++G+  E FDPDT++ + E  E++    N+IRWR+KR       L D    +  RESN+R VRWS+GS  L VG+E F+V+EH              L++ Q               T  G+VL+C G ++ K+  +PS++ S+AH+ LTLAVR+R +K +RI+++   VDPE+ K+ER + ++ L KQ            RR  ++ N  SN   S+ RRP MN  YLE      +D+  I+ +K+ ++   Y D G  + ED + G E
Sbjct:  161 MPRPEATRAHKTTLHMTKLPNLVGINPEPFDPDTFDADLEETEYRGNVHNMIRWRYKRSQDDGTMLRDPQTNKLQRESNSRFVRWSDGSVTLHVGNEVFEVDEHDSSTKNGFAGINGYLYLSQKAHTMGGGEGDNHDKTPAGTVLECMGPISSKMIPRPSSLKSEAHKNLTLAVRQRNMKKARIEEHVTQVDPEKEKLERIKNKDDLLKQEARGVSGRRGAGRRSGEYNNGNSN---SNNRRPGMNRRYLESNEDENYDNIDIRQLKRRSQEDEYLDYGEDSGEDADSGDE 448
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BLAST of mRNA_P-lacustris_contig1039.393.1 vs. uniprot
Match: B7FUI2_PHATC (Predicted protein (Fragment) n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FUI2_PHATC)

HSP 1 Score: 134 bits (337), Expect = 2.230e-31
Identity = 79/235 (33.62%), Postives = 137/235 (58.30%), Query Frame = 1 
Query:  214 VSRLPNILGVKTEAFDPDTYEEEAEADEF-KFTTNIIRWRHKRGSLGRPELGDDGRALRESNTRLVRWSNGSTQLLVGDEAFDVEE---------------HSIDRSALFVQQMTEE--GSVLQCQGELTKKISFKPSNVLSKAHRTLTLAVRKRAVKGSRIKKYAETVDPEQVKMERARAEEALHKQARRKHQHYNKYSNEDGSSRRRPAMNIDYLEE---GAFDDTSIKAIKK 855
            +++LPN++G++T+AFDPDTY    E D+F +   N++RWR+++   G     +  R LRESN+RLV+W +GS  L +G+EAF+++                +   ++ L      E   G+VL+C G +  +++ +PS++ S+AH++LT+ +R++ +K +RI +Y    DPE+ K +R + ++ L K + RK   Y++     G    RP M+  YLEE   G +D  +IK  K+
Sbjct:  137 MTKLPNLVGIQTQAFDPDTYHPAMEEDDFGQSVYNLVRWRYRKDDTGNYVRDEQDRLLRESNSRLVQWEDGSYTLHIGNEAFEIDALKTAANGFPGLNGFIYRTQKAVLKTADDNERAAGTVLECVGAVATRMTIRPSSLQSEAHKSLTVGIRQKTMKKARIAEYVTQEDPEKAKQDRIKVKQDLEKVSARKRSGYSQA----GGRTARPRMSRSYLEEEEDGDYDTFNIKDTKR 367
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BLAST of mRNA_P-lacustris_contig1039.393.1 vs. uniprot
Match: A0A448YW85_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YW85_9STRA)

HSP 1 Score: 129 bits (324), Expect = 2.160e-29
Identity = 92/272 (33.82%), Postives = 150/272 (55.15%), Query Frame = 1 
Query:  172 IPVLPRPPAGAEVMVSRLPNILGVKTEAFDPDTYEEEAEADEFK-FTTNIIRWRHKRGSLGRPELGDDGRALRESNTRLVRWSNGSTQLLVGDEAFDVEEHSIDRSA----------LFVQQ----MTEE--------------GSVLQCQGELTKKISFKPSNVLSKAHRTLTLAVRKRAVKGSRIKKYAETVDPEQVKMERARAEEALHKQARRKHQHYNKYSNEDGSSR---RRPAMNIDYLE---EGAFDDTSIKAIKKNAKAGRYDL 882
            +P   +P  G  + +++LPN++ ++  AFD   Y+E+ E + +K +  N+IRWR+K+   G P + D+   +RESNT+LV+WS+GS  L +G EAFD++  ++D S           ++  Q     T+E              G+VL+C G +  +   KPS++ S++H++LT+AVR+R VK ++I +Y    DPE++K ER +  E      +RK           G SR   RRP MN  YLE   +  +D  +++A+KK A A  YD+
Sbjct:  143 VPSAGKPQEGCSLHMTKLPNVVAIQPSAFDEVDYDEKEEEETYKGYVHNMIRWRYKKDDNGNP-MRDERGLIRESNTKLVKWSDGSFTLHIGKEAFDIQ--NVDSSTGSGFSGLNGYVYQSQKATFQTDENDSDNDDEDDLQNGGTVLECIGPVGSRFVAKPSSLQSESHKSLTVAVRQRTVKRAKIAQYMTEEDPEKLKQERIKYNEDAXXXKQRKRA-------TGGGSRGGGRRPGMNKGYLEADDDEGYDTVNLRAMKK-ASASNYDM 403
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BLAST of mRNA_P-lacustris_contig1039.393.1 vs. uniprot
Match: A0A7S0N493_9CHLO (Hypothetical protein n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0N493_9CHLO)

HSP 1 Score: 117 bits (292), Expect = 2.820e-25
Identity = 81/223 (36.32%), Postives = 118/223 (52.91%), Query Frame = 1 
Query:  175 PVLPRPPAGAEVMVSRLPNILGVKTEAFDPDTYEEEAEA-------DEFKFTTNIIRWRHKRGSLGRPELGDDGRALRESNTRLVRWSNGSTQLLVGDEAFDVEEH--SIDRSALFVQQMTEEGSVLQCQGELTKKISFKPSNVLSKAHRTLTLAVRKRAVKGSRIKKYAETVDPEQVKMERARAEEALHKQARRKHQHYNKYSNEDGSSRRRPAMNIDYLEE 816
            P+L  P   +++ + RL NIL V+T+ FDP  +EEE  +          K   N++RWRH     G P        ++ESN R VRWS+GS QLL+GDE  DV E   S D++ L+V+       ++QC G L  K+ F+PS++ SK+H+ LT  V K+  K ++++K    VDPE  K+ER R EE  +K      +         G +  +   N  YLEE
Sbjct:  120 PLLRLPGDPSKMKLFRLSNILHVETKPFDPQHFEEEDTSYVDASGERRTKLFQNVVRWRHSYTPQGEP--------IKESNARFVRWSDGSVQLLLGDEVLDVTEQDTSKDKAKLYVRHP----GLIQCLGNLESKLIFRPSSLNSKSHKHLTAIVDKKHAKVNKLRKMLTMVDPEVEKVERERMEEERNKNRMDLQRKQETVMERGGYNSAQRGFNSSYLEE 330
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BLAST of mRNA_P-lacustris_contig1039.393.1 vs. uniprot
Match: A7RUX9_NEMVE (Predicted protein n=1 Tax=Nematostella vectensis TaxID=45351 RepID=A7RUX9_NEMVE)

HSP 1 Score: 115 bits (287), Expect = 2.130e-24
Identity = 98/267 (36.70%), Postives = 140/267 (52.43%), Query Frame = 1 
Query:  199 GAEVMVSRLPNILGVKTEAFDPDTYEEEAEADEFKF----------TTNIIRWRHKRGSLGRPELGDDGRALRESNTRLVRWSNGSTQLLVGDEAFDVEEHSI--DRSALFVQQMTEEGSVLQCQGELTKKISFKPSNVLSKAHRTLTLAVRKRAVKGSRIKKY-AETVDPEQVKMERARAEEA-LHKQARRKHQHYNKYSNEDGSSRRRPAMNIDYLEEGAFDDT----SIKAIKKNAKAGRYDLGSSADEDDNDGSEDGNRXLEA 945
            G+E+  S+LPN L ++T+ FDP  YE++ E DE               N IRWR+ + S        D   ++ESN R+VRWS+GS  LLVG E FD+++  I  D + LFVQQ    G+ LQ Q    +K++F+P +  S+ HR +TL++  RA+K  +IK   A   DPE  + E  + EE  L  Q R ++Q   +   E   +R    +N  YLE G  DD     S+  IKK  K        S++EDD  G E+G   LE+
Sbjct:  162 GSELYFSKLPNFLSLETKPFDPALYEDDVEDDEILDEEGRARLKLKVENTIRWRYGKYS--------DDNEIKESNARIVRWSDGSLSLLVGAEVFDIQKTRIEGDFNHLFVQQ----GTGLQGQAVFKEKLTFRPHSTASQTHRKMTLSIADRALKAQKIKMLPAAGQDPEAQRSEMIKKEEERLRSQLRLENQQ--RRMRERSQAR---GLNSSYLEAGEDDDEDLEQSLLKIKKKYKEELAKGAYSSEEDD--GEEEGLGDLES 409
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BLAST of mRNA_P-lacustris_contig1039.393.1 vs. uniprot
Match: A0A7S0E948_9EUKA (Hypothetical protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0E948_9EUKA)

HSP 1 Score: 113 bits (282), Expect = 4.230e-24
Identity = 68/176 (38.64%), Postives = 102/176 (57.95%), Query Frame = 1 
Query:  172 IPVLPRPPAGAEVMVSRLPNILGVKTEAFDPDTYEEEAEADEFKF--TTNIIRWRHKRGSLGRPELGDDGRALRESNTRLVRWSNGSTQLLVGDEAFDVEEHSIDR-SALFVQQMTEEGSVLQCQGELTKKISFKPSNVLSKAHRTLTLAVRKRAVKGSRIKKYAETVDPEQVKME 690
            +P+LPRP  G+E+   RLPNIL ++  AFDP T+E+  E        T NIIRWR            ++G  +R+SN R+V WS+GS  L VGDE        ++  + LF +    +GS L+C G + KK+  +P+++ S  H+ LT  + K  VKGSR++ +  T+DPE+ K+E
Sbjct:   82 LPLLPRPEVGSELYTMRLPNILSIEPRAFDPLTFEDADEEQNTIMGKTDNIIRWRET----------EEG--VRQSNARMVTWSDGSMTLHVGDEVLTAAPQKVEGGNQLFTRH---KGSNLECHGLVRKKLVLQPASIKSSTHKALTKRIAKNHVKGSRMQMHTTTIDPEKKKLE 242
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BLAST of mRNA_P-lacustris_contig1039.393.1 vs. uniprot
Match: A0A2Z7AR72_9LAMI (Uncharacterized protein n=1 Tax=Dorcoceras hygrometricum TaxID=472368 RepID=A0A2Z7AR72_9LAMI)

HSP 1 Score: 113 bits (282), Expect = 8.710e-24
Identity = 75/194 (38.66%), Postives = 107/194 (55.15%), Query Frame = 1 
Query:  172 IPVLPRPPAGAEVMVS--RLPNILGVKTEAFDPDTYEEE-------AEADEFKFTTNIIRWRHKRGSLGRPELGDDGRALRESNTRLVRWSNGSTQLLVGDEAFDVEEHSID--RSALFVQQMTEEGSVLQCQGELTKKISFKPSNVLSKAHRTLTLAVRKRAVKGSRIKKYAETVDPEQVKMERARAEEALHK 720
            IP  PR  + A   ++   + NI+GV  + FDP TY EE       + +     + NIIRWR           G DG    ESN R V WS+GS QLL+GDE FDV E +++  +S LFV+   E+G + Q QG +++K+ F PS++ S +HR LT  V  R  K  ++K+Y   VDPE +  E+ R E+ + K
Sbjct:  140 IPSSPRSSSSASYKMATFNISNIIGVDPKPFDPSTYVEENYYVTDTSGSKRHLPSANIIRWRQV--------TGPDGNISLESNARFVTWSDGSLQLLIGDECFDVSEQAVEDIQSHLFVKLKHEKG-IYQAQGRISRKMRFMPSSLSSNSHRVLTAVVNSRNEKVGKVKQYVADVDPEFLAEEQMRVEKQIMK 324
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BLAST of mRNA_P-lacustris_contig1039.393.1 vs. uniprot
Match: F4PNT1_CAVFA (RNA polymerase II complex component n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4PNT1_CAVFA)

HSP 1 Score: 112 bits (281), Expect = 3.540e-23
Identity = 64/171 (37.43%), Postives = 103/171 (60.23%), Query Frame = 1 
Query:  202 AEVMVSRLPNILGVKTEAFDPDTYEEEAEADEFKFTTNI---IRWRHKRGSLGRPELGDDGRALRESNTRLVRWSNGSTQLLVGDEAFDVEEHSIDRSALFVQQMTEEGSVLQCQGELTKKISFKPSNVLSKAHRTLTLAVRKRAVKGSRIKKYAETVDPEQVKMERARAE 705
            A++M  ++ NILG++   F P +YE++ E  E    +N+   IRWR          L   GR  +ESNTRL++WS+GST L +G+EA +V+EH +     +V    ++ + ++C+G++  KI+ +P+ V SKAH  L  ++  R  K ++IK    TVDPE+ K++R RAE
Sbjct:  353 AKIMKLKVLNILGIQPIPFHPKSYEKDEEIAERGRPSNVESVIRWRWA--------LDQHGRPTKESNTRLIQWSDGSTHLFIGNEALEVKEHELAGDQFYV--YNKQDNFIECEGKVDSKIAIRPTKVRSKAHMRLRESIASRTQKSAKIKSIVTTVDPEKEKVQRERAE 513
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig1039.393.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FUQ9_ECTSI1.130e-7654.64Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836CAV3_9STRA4.090e-6248.21Leo1-like protein-domain-containing protein n=1 Ta... [more]
A0A7S2XRE6_9STRA1.060e-3235.05Hypothetical protein n=1 Tax=Attheya septentrional... [more]
B7FUI2_PHATC2.230e-3133.62Predicted protein (Fragment) n=1 Tax=Phaeodactylum... [more]
A0A448YW85_9STRA2.160e-2933.82Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A7S0N493_9CHLO2.820e-2536.32Hypothetical protein n=1 Tax=Pyramimonas obovata T... [more]
A7RUX9_NEMVE2.130e-2436.70Predicted protein n=1 Tax=Nematostella vectensis T... [more]
A0A7S0E948_9EUKA4.230e-2438.64Hypothetical protein n=1 Tax=Phaeocystis antarctic... [more]
A0A2Z7AR72_9LAMI8.710e-2438.66Uncharacterized protein n=1 Tax=Dorcoceras hygrome... [more]
F4PNT1_CAVFA3.540e-2337.43RNA polymerase II complex component n=1 Tax=Cavend... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig1039contigP-lacustris_contig1039:33163..46309 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score137.5
Seed ortholog evalue1.4e-29
Seed eggNOG ortholog2850.Phatr44561
Preferred nameLEO1
KEGG koko:K15177
Hectar predicted targeting categoryother localisation
GOsGO:0000428,GO:0000988,GO:0000989,GO:0000993,GO:0001076,GO:0001098,GO:0001099,GO:0001501,GO:0001650,GO:0001672,GO:0001704,GO:0001706,GO:0001711,GO:0002682,GO:0002683,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0005737,GO:0005813,GO:0005815,GO:0005829,GO:0005856,GO:0006139,GO:0006282,GO:0006325,GO:0006351,GO:0006353,GO:0006354,GO:0006355,GO:0006356,GO:0006357,GO:0006366,GO:0006368,GO:0006378,GO:0006396,GO:0006397,GO:0006464,GO:0006479,GO:0006513,GO:0006725,GO:0006807,GO:0006950,GO:0006996,GO:0007275,GO:0007369,GO:0007399,GO:0007417,GO:0007492,GO:0007507,GO:0008023,GO:0008150,GO:0008152,GO:0008213,GO:0009058,GO:0009059,GO:0009266,GO:0009409,GO:0009628,GO:0009653,GO:0009790,GO:0009792,GO:0009887,GO:0009888,GO:0009889,GO:0009891,GO:0009893,GO:0009909,GO:0009910,GO:0009987,GO:0010001,GO:0010048,GO:0010390,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0010639,GO:0010847,GO:0014031,GO:0014032,GO:0014033,GO:0015630,GO:0016043,GO:0016070,GO:0016071,GO:0016567,GO:0016569,GO:0016570,GO:0016571,GO:0016574,GO:0016591,GO:0016593,GO:0018022,GO:0018023,GO:0018130,GO:0018193,GO:0018205,GO:0019219,GO:0019222,GO:0019438,GO:0019538,GO:0019827,GO:0019899,GO:0021510,GO:0021515,GO:0021529,GO:0021782,GO:0022008,GO:0022607,GO:0030154,GO:0030318,GO:0030880,GO:0031056,GO:0031123,GO:0031124,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031396,GO:0031399,GO:0031440,GO:0031442,GO:0031445,GO:0031452,GO:0031454,GO:0031974,GO:0031981,GO:0032259,GO:0032268,GO:0032446,GO:0032501,GO:0032502,GO:0032774,GO:0032784,GO:0032786,GO:0032968,GO:0032991,GO:0033043,GO:0033044,GO:0033182,GO:0033523,GO:0033696,GO:0034243,GO:0034641,GO:0034645,GO:0034654,GO:0034968,GO:0035206,GO:0035987,GO:0036211,GO:0042063,GO:0042127,GO:0043009,GO:0043170,GO:0043175,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043414,GO:0043473,GO:0043631,GO:0043933,GO:0044085,GO:0044087,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044422,GO:0044424,GO:0044428,GO:0044430,GO:0044444,GO:0044446,GO:0044451,GO:0044452,GO:0044464,GO:0044877,GO:0045165,GO:0045309,GO:0045595,GO:0045596,GO:0045637,GO:0045638,GO:0045798,GO:0045893,GO:0045935,GO:0045943,GO:0045944,GO:0046483,GO:0048066,GO:0048468,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048562,GO:0048568,GO:0048580,GO:0048581,GO:0048583,GO:0048598,GO:0048646,GO:0048701,GO:0048704,GO:0048705,GO:0048706,GO:0048709,GO:0048731,GO:0048762,GO:0048831,GO:0048856,GO:0048863,GO:0048864,GO:0048869,GO:0050684,GO:0050685,GO:0050789,GO:0050793,GO:0050794,GO:0050815,GO:0050896,GO:0050931,GO:0050936,GO:0051052,GO:0051093,GO:0051128,GO:0051129,GO:0051171,GO:0051173,GO:0051219,GO:0051239,GO:0051241,GO:0051246,GO:0051252,GO:0051254,GO:0051276,GO:0051568,GO:0055029,GO:0060255,GO:0060485,GO:0060795,GO:0061695,GO:0065003,GO:0065007,GO:0070013,GO:0070063,GO:0070647,GO:0071704,GO:0071840,GO:0072359,GO:0080090,GO:0080134,GO:0080135,GO:0080182,GO:0090262,GO:0090304,GO:0097159,GO:0097659,GO:0098727,GO:0099122,GO:0140110,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901576,GO:1902275,GO:1902494,GO:1902680,GO:1903311,GO:1903313,GO:1903320,GO:1903506,GO:1903508,GO:1903706,GO:1903707,GO:1904837,GO:1904888,GO:1905268,GO:1990234,GO:1990269,GO:2000026,GO:2000112,GO:2000241,GO:2000242,GO:2000819,GO:2001020,GO:2001141,GO:2001166,GO:2001173,GO:2001207,GO:2001209,GO:2001251
EggNOG free text desc.RNA polymerase II C-terminal domain phosphoserine binding
EggNOG OGs2XDHC@2836,KOG2428@1,KOG2428@2759
Ec32 ortholog descriptionLeo1-like protein
Ec32 orthologEc-19_004270.1
COG Functional cat.S
Best tax levelBacillariophyta
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03021
Exons10
Model size1275
Cds size1275
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig1039.393.1prot_P-lacustris_contig1039.393.1Pleurocladia lacustris SAG_25_93polypeptideP-lacustris_contig1039 33163..46309 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815306.4589179-CDS-P-lacustris_contig1039:33162..332161622815306.4589179-CDS-P-lacustris_contig1039:33162..33216Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1039 33163..33216 +
1693493465.6709301-CDS-P-lacustris_contig1039:33162..332161693493465.6709301-CDS-P-lacustris_contig1039:33162..33216Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1039 33163..33216 +
1622815306.469168-CDS-P-lacustris_contig1039:35567..356841622815306.469168-CDS-P-lacustris_contig1039:35567..35684Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1039 35568..35684 +
1693493465.6843445-CDS-P-lacustris_contig1039:35567..356841693493465.6843445-CDS-P-lacustris_contig1039:35567..35684Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1039 35568..35684 +
1622815306.482216-CDS-P-lacustris_contig1039:39283..393971622815306.482216-CDS-P-lacustris_contig1039:39283..39397Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1039 39284..39397 +
1693493465.694085-CDS-P-lacustris_contig1039:39283..393971693493465.694085-CDS-P-lacustris_contig1039:39283..39397Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1039 39284..39397 +
1622815306.4933472-CDS-P-lacustris_contig1039:40524..407211622815306.4933472-CDS-P-lacustris_contig1039:40524..40721Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1039 40525..40721 +
1693493465.7122269-CDS-P-lacustris_contig1039:40524..407211693493465.7122269-CDS-P-lacustris_contig1039:40524..40721Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1039 40525..40721 +
1622815306.5101025-CDS-P-lacustris_contig1039:41677..418731622815306.5101025-CDS-P-lacustris_contig1039:41677..41873Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1039 41678..41873 +
1693493465.7245674-CDS-P-lacustris_contig1039:41677..418731693493465.7245674-CDS-P-lacustris_contig1039:41677..41873Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1039 41678..41873 +
1622815306.5198302-CDS-P-lacustris_contig1039:42665..428001622815306.5198302-CDS-P-lacustris_contig1039:42665..42800Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1039 42666..42800 +
1693493465.7331781-CDS-P-lacustris_contig1039:42665..428001693493465.7331781-CDS-P-lacustris_contig1039:42665..42800Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1039 42666..42800 +
1622815306.5289826-CDS-P-lacustris_contig1039:43738..438091622815306.5289826-CDS-P-lacustris_contig1039:43738..43809Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1039 43739..43809 +
1693493465.7437885-CDS-P-lacustris_contig1039:43738..438091693493465.7437885-CDS-P-lacustris_contig1039:43738..43809Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1039 43739..43809 +
1622815306.5399168-CDS-P-lacustris_contig1039:44678..448661622815306.5399168-CDS-P-lacustris_contig1039:44678..44866Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1039 44679..44866 +
1693493465.755406-CDS-P-lacustris_contig1039:44678..448661693493465.755406-CDS-P-lacustris_contig1039:44678..44866Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1039 44679..44866 +
1622815306.5514197-CDS-P-lacustris_contig1039:45439..455731622815306.5514197-CDS-P-lacustris_contig1039:45439..45573Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1039 45440..45573 +
1693493465.7641118-CDS-P-lacustris_contig1039:45439..455731693493465.7641118-CDS-P-lacustris_contig1039:45439..45573Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1039 45440..45573 +
1622815306.5645905-CDS-P-lacustris_contig1039:46240..463091622815306.5645905-CDS-P-lacustris_contig1039:46240..46309Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1039 46241..46309 +
1693493465.7716808-CDS-P-lacustris_contig1039:46240..463091693493465.7716808-CDS-P-lacustris_contig1039:46240..46309Pleurocladia lacustris SAG_25_93CDSP-lacustris_contig1039 46241..46309 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-lacustris_contig1039.393.1

>prot_P-lacustris_contig1039.393.1 ID=prot_P-lacustris_contig1039.393.1|Name=mRNA_P-lacustris_contig1039.393.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=425bp
MEDSPTSEARAARMITEEDEDSASSDKGAPTASSAAGGRGLLGTGLSSDS
EDDEASGIPVLPRPPAGAEVMVSRLPNILGVKTEAFDPDTYEEEAEADEF
KFTTNIIRWRHKRGSLGRPELGDDGRALRESNTRLVRWSNGSTQLLVGDE
AFDVEEHSIDRSALFVQQMTEEGSVLQCQGELTKKISFKPSNVLSKAHRT
LTLAVRKRAVKGSRIKKYAETVDPEQVKMERARAEEALHKQARRKHQHYN
KYSNEDGSSRRRPAMNIDYLEEGAFDDTSIKAIKKNAKAGRYDLGSSADE
DDNDGSEDGNRGLEALRAARAAAKAAANEVLGTDSEEEEEEEEEDEDDEA
RGGAVGERKGRGRRLGGGGTRMYDEEEEEEDEEEDEEEGGRGVGKRSRAS
QESTPARSGKRSHRSIAEDSSESE*
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mRNA from alignment at P-lacustris_contig1039:33163..46309+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-lacustris_contig1039.393.1 ID=mRNA_P-lacustris_contig1039.393.1|Name=mRNA_P-lacustris_contig1039.393.1|organism=Pleurocladia lacustris SAG_25_93|type=mRNA|length=13147bp|location=Sequence derived from alignment at P-lacustris_contig1039:33163..46309+ (Pleurocladia lacustris SAG_25_93)
ATGGAAGACTCGCCCACTTCGGAAGCGCGGGCAGCAAGGATGATTACTGA
AGAGGTTAGTATGCTGTGATTGCACTGTGGTAGGCGGAAAGGTGCTTGCA
CAGGGAGAGACAAAAACGATGTTTCTGACAGTACGGCGGCAACCTACAAG
AAGATTGGACGTAGGGTGTGCGGTGGTGTGGCGTTCGTTGCCCCTGCGGT
CGTTATGTAGTGTGACCTCGTCGGTAGCTATCTCCTTCTGTTGATCTTGA
ATGATCTTGATCTTGTTGACGTAAAACTGAGGGTCAGCAGTGCAGTGAGA
GAGAGAGGGTGCGATTCGCTCGGAGTCTCTGCTCTTCATATAGTCCGTGC
ACAACCATTTGTCCAATAACGTTTGTTGCGATAACTATTTTTGGAAAAAG
AATTAGAACGCGAAACAACGATCGCCGTGACCACCTCGTCGAGATTCGAG
ATACCTCGATACTTGTAGCTTCAGAGTTTTTTCCATTTTGGCGATATGCA
CCACTTTTTGACAAAATCATCCACGGTGCCCCCAAACATGATCATACCTT
TCACTTATCATTCACGGAACTCCCAAAACCACCCCCCACGACCCCTCCCT
ACCCTGTGCAGCATCTACTTTATACACCACGCAAGGGGGCAGCTGTAGCG
CAAAAACCCACACCTATCATCCCAAACCGGGATAAGCCGAAAAAGGAGCA
GGGGCGGGGGGTCTATTATATAGGGTTTACCATTATATAGGGTTTAGTAT
GCCATACTAAACCTATATAAAACCTTAATATATAGGATTTAGGGTGCCAT
AAAACCTGTGTAAAGCTTACTTATAGGATTTAGACTACCTGCGCCTATAT
AAAAGCTTATTATATAGTGTATAGGCTTTAGATGGCGCACTAAATCCAGT
AAAATAAGACCGACCCGACCAAACCGGGATAAGCCCAAAAACTCACGGGG
GGTATGATAGGTGTGGACTTTTTGCGCTACAGCTGCCCCCTTGCACCACG
GGCACCACATGCTTCCATTGTACAGATGCCATGAAAACGCTTGATCGACG
TCACACCCTCGAAGGCCAAACACATCACCACTTCTATTATACATTTGACG
AGTATAAGGGTCGGTCTTAACGGCGAAATCGAATCCACAATTTCCGTTTA
CACTTGAGAAATAAAGCGCCGGAAAAGCGGAAATGTGATTTCAAACGCCG
AAGTGTCTTAACGGCGAAGACAAAAAATGAATTCCCAGTTCAAGAACCGC
TACGAAAAAATGTTTCCAGGATTGTTCCTGCAGCAAGCTGATTGCAGCGG
TTGATGTTTTTGTACCGCTGAAGCACCGTCGCCAACTCAAGTTCTGAGCC
ACCCAAGGTCTGGTGGACCATCACAACCACCACACTAAAGGCACCATACA
CACAGCCATGGGGGTAGCTTTGTCATTGCTGTTGCTCCTTTCAGTGGAGA
GGGGTTACCGAAAATCCAAATGATAAATTCTCCCATCAGCTAGCGGTAGG
TCTTTTTCGCACACCAGTCGACCGTCGCCAGCTTCGTTTTCCAGCCTCCC
AACCCTCACGGTCTCAAGCTATCACCGCGCAAGGGGCGCCATACACATAG
CTACGGAGGGTAACTTTTTCACTGCTGTTGCTTCCTTCAGTGGGGAGGAT
CACCGAAAAACCAATTGAATGAAGCCTGTGCGAGCAGCGGTTTGACCTTT
TTCTCGCACAGCTGTCAGCAGTCGCCATCGTTGTTTTTGAGCCTCCCATC
GCCTCACGGTCCCAAACTATCACAGCACAAGAGGTCCCATACATGCAGCT
ACGGGGGGGAAGCTCTGTTATCTCTGTTGCTTCGCTCGGTGGAGAGGGGT
TACCAAAAATCCGATGCAAAAATGCTTTGCCAGCTGTTCGCGTTCAGGGT
TGTATGAGCGGCGCAGGCTGTGTATATGGTGCGCGCGCGCGTGAATAGAC
CGTGGTCCCGCAAGTGTGGTTCCGTTTCACCCAAGTGTCAATCCAAAGAA
ATGCCCAAAGCATTTCTTTGAATCCCCAGATCCAAAAACCGAGTGTACAG
TTAAGTCCGTTAAGATTCAACGGTCTCCAAACTTCTCGCCCAATAAAAAT
GGAAGTTCCTTGATTCCAGGACTGAATTGTAAATGTGAATTCAATTTGTG
GATTCGATTTCCCGTTAAGACCGACCCTAAGGATCTCTCGTCGAACTTTC
CGAGTAATGAATCAGAGCAGCTTTTACTGTTTGTGTTCTAACGTCTGTCT
GTAGTCCGGAAGAGACTTCTGTAAATCCCAGTGCCTGTACTGCAAGCTGT
AGGCGGCGCAGCACACAACCTAGTCGCACCTTGCAGCAGACGAGGAGAGA
GTGATATATTGCCGGGTTTTGGCTCTTGCGTCCCCCCCCGGTTCTGGGCT
GTCAGGACGAGGACAGCGCGTCGAGCGATAAAGGAGCTCCAACAGCGTCT
TCCGCAGCCGGCGGGAGAGGGCTGCTAGGGACCGGGTTGTCATCGGACAG
CGAAGACGATGAGGCGAGCGGGGTGAGCGAGACAAAGACAAGACGCTGCT
GGATGTCTGGTTCGAGTGGGAGAATCCGCATCCATGTTTTGATGTACATG
TGTCCGTGGCGAAGTACCCGATGAGAACTTTGTCCGGATACGGCGGGGAG
GGTGTCGTAGCAGTAGCTTTGTAGGGTGAGGACGCAAAGACAATTAGTTC
GGCGTGTTGTCCGCTGCTGGTGCGTGGTACGGTACGCCTTTAAGCGAGCG
GCAGGCGTGTTTTTTCCCAATGCCTCGACACTAGTCCGGGGCGCAGCACG
TCCAATGCGTGTGCTGATATTGTCATCGTGCCCTGGTCGCGGTCAGGCTG
AAAACGGCTCGAAAGCTGCTCGGCGAAATGGACGCGGTGACGGCGACGCG
GGGAGCGGGGATGAGGAAGGCAACGGCAACAGCAAGGCCAAGTTAGCAAT
GTAAGGTTAAAAGCGTCGTGGGCGAGGTGCAAGGGGGAAGCTGGGAACAA
AAATCCCACACCTATGACCACAACCTGAACAAGCCCGATACTGTAAGGAG
ACGGAGGAGGGGGCGGGTAGCATATTTGAATCTAGCTGCCTGTCTTGAAA
GAGGTGGGTCCGGGGCATCCCCGGGCAGGACTCGATACTGCAATAGACGC
CACCAACGGATGTGATTTTGCCGGCAGCTGCAGCGCGCCGCGGAGCAGTA
CCGAACCCTCGTTCCCGTACACATACCGAGTACACACTCCTGAAATGCTA
CGATGAGCCAACCCGCGACACTTTACCGTCTGCCCTCGCCAATATCGGTA
AGGCTTGTCCTGTTGACGCTGAGTTCGGGGTGGTTGGTGGGTAGAATTAT
TTGCGGAGGTTTTTCGTCACCAACCCTCGTCGTGGTAAGGATAAGTGGCA
TGCAGTTCTCCTCGGCGGCACAACCAACATGTCCCACTGCACGATCATGA
CCCCCGCCCCGTCCCCTCCCTTCCGTGATTTCCCTTACGCCGTGTGAAGC
ATTTTTGCTTCGACCGCCGTGGCCGATTTTCTCGTTGAACCCCCACCCTA
CATCGAAGCCACCAGCCCCATGATCTGCTCTTGAAATGCAGCCGCTCAAG
ATCCAATTTTTTATGGGGCGCACTGAATAGTCCCACAATGATTTGCGCCT
GGAGGGAACAGCGCCCACAACCAGCCAGCCATAACCCAATGTTCTCGCTC
CCGCTTTGTCTGATTGGGACGTGAGAAGGGTCTCTTCTCTCCAAAGACAA
CAGGCAATGCAAGTTTTTGATAGCTTCCCCCCGCCCCCGTCTGACACGTT
TCACAGGAAGGACCTATTCGGGGATGACGAGGACGAGGAGGAAGAGGAGG
AGGAAGAGGAGGAAGAGGAAGGAGAGGGGCGACCACAACCAAGACAAGCG
GGAGGAGGGGGGGCGGGGGTAGGTATGGGACGGCAGGAGAAGGCTCAAGC
GATGATGAGAATGACGAGAACATGTTCGGCGAAGGGTGAGAGAGGAGCGC
TGCCGCTCCAGTGGTGTACAGCAGACGGCACAAGTTATATCAAGTTGAAG
CTTTTGTATCGCTTTTCACGGCGGGACTTGTCCTTTGGTTCTGAAGACGA
CAATGAGCCGATCCGATGACCTTTGCATCCCTCTGCGGTGAACACATTGG
CACGATCCGGGGTCTCGGAAACAGCAGTGACACGTGCATGCGCCAAGGCC
TCCAAATGCCCACCCACCCCCGCTGTTTCGCTATGTTCACCGCGGACCTA
TCCCGCATCCTTCCTCCACCTGGGGAGACAATTCCCATGAGAGGTTGCTT
TAACGTCGAAATTGACACTCGGGTAGAAGTCGAGTGACAACCAGGTTGGG
GGATGGGGGCAGGGAGGATGGGGTTGGCTGTATTTTGCCAACAGAGCAAA
TACGAGGAGGCTTTCTTTCGCTGCCCTGACAAGCTGAAATTGGCTGTTGC
AGGAAGACGAATCAACAAACGTTTGGAGCTATTGGTTTGGGGAAATCTGG
AATACCTCCATCCGGATTTGCACACGCCAATTCGATCCGACCTCCATGTT
CCTCACCGGGATAGCGCCGTAAGTTGGTTGGCGTGCCGGCCTTATAGCAT
CCACACGCTGTCTGGGAATAGCTGCTGTGTTGGTGTTTTTTGCGTCTGAT
GAGTTTTTCCTAACTCCCGATGATGTATACAAACGTCGCTCTTCAGAAGA
ACGGTTTTAGTCAAGCGCTAACAGTCGGTCAAATGCTGAGACAAGAGGTC
GATCTATCAATCAAAACAATAGAGGCTCTTATACGCAGTAGTGATTAGCT
GGAATATTTTGCTTTGGTCTAGAGTGTGGTGCACGTGGTCCGTCTTTCTG
CCTATTTGGCAGCCGCGTCAGCTCCAGCAGCGAGAGATCCCGCCGCGTGT
GGAAGTTGCTGGCGCTCGTTTTGCAACCTGGGATTTCTGAAAGTTGCGTG
AGAGACTCAGGCCTTACTGCATGTCCCCAACCAGCTAGCGGCTTTGTCTT
GATTTTGCATCATCCATCCATCCATCCATCCATCCATCCTATCTGGGTGT
CGGTTTTGTCGTCGAGACAGATCCTTATTTTCCCTCCCTTCAATAGACGC
CGACCCTTATTCTCCCTCCCCTTAATAAACGCCTTTTGGTTTGCTTCCAA
AAGGGAAGGTGTCGCATCCGGGAACGGGGCGGCCTCCTCTGGCGGTTACG
CAGGAGGCGGTATCCGTGGCGGGAGCAGCGACGAAGACGAGCAGTTGGAG
GCACCGCCCACGCCCTCGAAGATAGGAAGCTCAAGGTGGGAAGAGACAGA
AAGAAACAGAAGAGAACCCAAGAGAAGCGGGTTCGTAGGCACGTCACGTG
ACGTCACCAAGAATCATGGAATTCAACGTAACGTATCGGTCTATCTGTCG
ATCGGTGAACGTGTGTATACGGTGTATCCATTCTCTTGTCTATGTATGGT
CTATGTCGATTTATTGCGGCACGTATCTATCATTGAATCAACCTAATCAA
TCTGAATCAAGTAGGGTAGGTGGAACAGGGGGGGGCACGTGGAAAAGATC
GGGCACTCAAGGGAGGGTTGCAGCTTCTGCGGCATCGCTTCGGCTTGAGT
TGATAGATATTTTACCTCCATACCTGGTTTTGGCTGTTCGTTTCGTCGTC
CAGCGCCTTCTTCAAGAGGTACCATTACCATTACCAGTTCCTGGTTCGGT
TCATGATTCATGAGAGAGCTGCCTCCCAGGATGTAGTAGGGGTCATCGCG
CTCAGCCTTGAGAGGCAACTCTGATTGATAGTGTCGTTCGATGGCTATCG
CCATCTTCATCGTCATCGTCGCTGAATATTGAGAAGGACGCCTTGGGTGG
GCGTTCGCAATGAAGCATTGTGCCCTTGATTTCCCATAGCGCCCATCCGC
TGCCCTGACGGGCTTGTGTTTGTCAGGTTTGGCACCAAGAAAACGTTAAA
CAACACGTTGGCGTGCCCCGTCCTCGTTTCTGTTTTCTCCGTCTTATTTA
GTTCGGTGCGTCTCTTAGCTGCTTACTGCTGCGGTTACCCCTTTCGGGAC
GAGCCCTGCTCCGACGGTGCCGTTTTCCTCCCGCCCCGCCCCTCGTTTCG
CGTTTGCCGCTCATGCCCCAGATTCCTGTGTTGCCGCGGCCGCCTGCGGG
AGCGGAGGTGATGGTTTCGCGGCTGCCTAATATTTTGGGCGTCAAGACGG
AGGCTTTCGACCCTGACACGTACGAGGAAGAAGCGGTGCGTTCGCGTCGT
CGGGGGCTACGAAATATCAGAATGATTTCGAGGGAGGCCTCGTCAGTTTT
GTGACGTTGCCTTGATTGGCTCAATCAATTAGCCATTTACCCAATCGTCC
CCTCTAAGAGGCAAGCTGGGGACAAGGACTTGGCGAGTTGATGTGTTGTA
TGGGATTTTTAGGTGAGGTTTGGTGGGAGGCGTGTTTGGCAGGAGGATAC
ATACGTACTGCCGTAAACGTATTGCCGCACCGCTGTGTTTCCCCTCCCCC
GGCCTGTCTTTTTTTTTCCGAGGCAACATTCGGCTGTATACGAGAGCCCC
CCCTCTTGCCCCTGTTCTTTCGCTCTCGCTCGTTCTCACGCCGTTGTGTG
CGATCATCTGCTGTTGTTGAAATATACGAAGAAGTCAAACTCCTGTGTGG
CCTGCCTCCTTCGTGGCCCGGCTGGTGCTATGCTATCGTTCACCAATACT
ATTAGCCAAGAAAAGGGATTGTGTTGAGCCTGCACTAGCGTCTGAACGTA
TGGAATTGGATCACGCATAAATCCGGTCGCCCCGGTGGTCTAGTGGTAGC
CTCGAAGCCATCTAGCAGCAAAGGTCGTGAGTTCGAATCCCCCTGGGGGT
GAAAAATTTGCAAATTTGCAGGTGAAAGCGAAAAAAGCTGAAAAGCTCGT
GAGTACCAAACTTCGACGTTAGCAACGTTGACGAGGGAAAGGACGGCCGA
ATCCTTCTCGCGATAAAAATTAAGGCACGCACCGCAGAGGAAGGTGGGGC
AAAAAAAAAAAAAGTCATAAAAAGAAGAAAAAAGCCCTGTGTTTACCCCC
CTGTGTGACCCCGGTTGGTTCTAGTGGAATTAAAAAAATACACTGAAAAG
TGTAGTCCGTTAATACACCGCAACGTGTAGTACACGTCTCACCTTGATCG
GGGGACTGTCGCCAATAATAAATGGGACGAAAACACACACACACACATAC
ACACACACACACACACACACACACACACACACAAGGACTTGTCCGTGGCA
TGATGGTCATCATCATGCCCAAAGTCTGCTTTGCCGTTGCGGTGCTCTGG
TACTGGTACATGACGTACATGACGTAACCGACCAAGACAAAAAAAAAACG
TTGGTCGCTCAGGAGGCAGACGAGTTCAAGTTCACGACCAACATCATCCG
GTGGCGGCACAAGCGGGGCAGCCTCGGCCGGCCGGAGCTGGGGGACGACG
GCAGGGCCTTGAGAGAGAGCAACACCAGGCTGGTGCGTTGGAGCAATGGG
TCGACGCAGCTACTGGTCGGAGATGAGGCTTTCGACGTCGAGGAGCACTC
CATCGATAGGTGAGCGGGTCGCGCGGATTGATGGCGTCGTGCTGCCTGGA
AGGCACAGCGCAGGGTGGGGCGGGCAGGCTCTTCAAATCGTCGATCTTAA
TCCCGCCGCATGTTTTGGGAAGCTTCAGTTCGAAGTAGCTTCTGGCTTTT
GGCCGGGTTGTCCGTGCAGCCTCAAAGTACACTATTTCGGAAGCTCTGGT
TCGTAGCTCGCTTGTTGATGTATGTATTCCGTTGGGTCGCATGCGGACCG
TCGACTGGGTTAAGGACACCTTTGTGAAGTCGACTCCCTCCCCACGTTCA
GATTTTTTTTTTTTTGTACGTGTGTGTCCTTGAACATATCGATCGTCCCC
TGGGGCCTTAGAGGCACTTCCCCACGTTAAGGACACTTTTTTTTCAACGT
GTGTGTCCTTATCCGGGGGTCGATTTGACGTAATACGGTATTACTTGTAT
ACGGTTGCCATGCTCTGGCCAAAAAAACACGCAGTTGTTGAGATTTTGGG
CCCTTTGCCCAATATCACTGCTGCTATGGAAGTAGGGTAGGCGGGGGGAC
GTGTCTCTGCTATGAAGCCCTACTTTAGTATACTGGCGACACAGCTGTGG
TTGTGTGCTTCTACGGAGGAGCGTTCACCGGGCGGCGGTAAATTTAGAGA
TTAGTACTGCTTTAAATCAGCCAATGTTTTTGGTTGACACTCGAGGCGGG
TACTGCGTTGGGTCGAGGATAAGTTTTATTGCTGTAACCCCACGACCGGT
ATGGTGAGGCATGGCGAAAAGACTCATGAAATCTTCCGTCCCTTCCCAGT
CCCCCTGATCCCTGTTATGTCAGGTCACGTCATGTCATTACTCTTCGCTC
CTTGTTCGGTGTTGTTTCGAGTGCATCTTCGTTTTTAGCAGATGGCAAAG
ACCACAAAACGAGAGGCTGGTGCCCCCCTCCTACCCCCATGACGCCTCCA
TTCAATTTCCCGCAGGAGCGCTTTGTTCGTGCAGCAGATGACCGAGGAGG
GCAGCGTCCTGCAGTGCCAGGGAGAGCTGACGAAGAAGATCTCTTTCAAG
CCTAGCAACGTTCTCAGCAAGGCTCACCGGACGCTAACCCTCGCCGTTAG
AAAGAGGGCAGTCAAGGGCTCGAGGATCAAGAAGTACGCTGAGACGGTCG
ACCCGGAGCAGGTATCCTACGCATGTAAACGTGCCGCCAGGGAAAAGCGA
GCATAGCCCCCCTCCGTCGGGCCCCTCCGTAGGCCGATCTGGCCCTCCCC
GGCGAGAACCCTTTTTTATGGCATGGATCGAATGAGTACGAGGAAAACAC
GCGGAGGCCAATACCGTACCGTACCATGTAGAGTCCCGAACAGGTTTTCT
TTGATTTCATGTTTCGCCGCCATTTTATGTGGCCTAAAGGTGCCCCCAAC
ATGACATGGGGAGTGTGGCGGTACCGTGTCGGAGATATTTTCGGCACGGC
ACTGGTTTCTGCAGATTGGAATATTGGAATGACGCATCCTGTTATGTTTG
CGGTGACTGCCTTTGGCCGGTGTACCGTGATCATCAATGCACGAGTTTTC
GATCGTGTATCAGCTTGTGGCGATATGGAGATAATTTTGGCATCAGATGG
CGATGCAGGAAGTATTTTAGTATCGAGAGGGTTGTGGCACACAGCGCACA
GCAGGCATGTCGTAGTGCCAGCGCTTGTAGACTTGTACCATAGGGATGGA
GGCACATGCTTGGGTGCAGGTGGGCTAGTATTTTGGGCGGAAATGGACAT
ATCTCATGAAAAATGGGCGTGGGGTCCTTATTTTGGTTGCTTCGCCCATG
CCTTTGCCCTGTCAGTTTTTGTTCGTTTTCTTCCTAGAAAAGATCTTCCT
GGAAAAAATCAAGGTCGTCTTTGTCCGTGAATACGACAAGATTTTGACAT
GTCAGCCGTTTTTTTTCGCCGATGCAACCTTGTTTTGTTTTTTTTGCCCG
CAGGTCAAGATGGAGCGAGCCAGGGCAGAAGAGGCCCTCCACAAGCAGGC
CAGGCGTAAACATCAACACTACAACAAGTACTCCAACGAGGACGGGAGCT
CGCGCAGGCGACCGGCCATGAACATCGACTACCTCGAGGCAAGCGCGCGC
GCGTGTGTGTGTGTGTGTGTGTGTTTGCGTTCGTTCGTTCGTTCGCCCCG
TCCATTCTGTTCCGTCCTGGCGCCAATGTCCACACCTTTTTGGGGTATTG
TAAAAACTTTGAAATATTAGGAGGGCAGTCACGCAGGTGTTTCGTTTTTA
AGAAAAAAGCACAAATCATCAAATGTTTTTTTCTGTGTTTTTGTTGCTCC
ACCTAATGAAAAAAATGGGATGAGAAAACAAAAAAACTCTCCTGCGCCGC
TTGCCGTAGTCATCATGGCGAGAAGGGTTCAGCCGTCCCTTTCTGACATC
GATTAGCTGCGTCGCGTTTTGGCTGCTCACTCATGAATCGCTTGCCGCCG
CAAAGTTATCATGGGAAACCCTCCCAGAGGGGGTTGACCTCCATCCCTCC
CGCCAGTGTACGTTAACGAGGGGACCACTTACACCAGTGGGGGCACCGAG
AGCAGAGTGAACTTTTGAACCAGAGTGCACGGTCAAAATCACGATCACGT
GGTGGAAGGACAGGCGGACAGGAAAGCCTAGAAGGTTGCAAGAACGTTTT
CATCGTCAACACGCACGTGCCTGGTTGAGTTGAGTGTTGGACGGGCAAAA
CAACGTGGACCACGGAGATGAACGCAACGAAACTCTTCAGGCAATTATCC
ATGTACCCCCCAACGTTTTGGTTCGCTTCAATGGTTCGTTTTCCGTGCGT
TCTGATTATGGCACGCATGGCGGCTCTTTAAACATGAACTACTGCTGTAC
TGTATCCTACCGCACCACGAGAAAAACAAAAACAAGCGGAGAACGCGGGA
CAAGTTTGGCTTATCGTTCTTTTTTTTTTGCAGGAAGGAGCGTAAGATAA
GTTTGGCTTATCGTTCTTTTTTTTTTGCAGGAAAAAGCGTAAGACAAGTT
TGGCTTATCGTTCTCTTTTTTTGCAGGAAGGAGCGTTCGACGACACGAGC
ATAAAGGCCATTAAGAAAAACGCCAAGGCCGGCCGATACGACCTCGGGTG
AGCGCCCATCCTTTCCACCACGAATGCTGGGCATGTTTTGTTGTTGTGTG
AAACGATGGACATTTTTTCTTTGGCCCCTGATAGTCAAGGCCTTGCTTTG
GTTGTGGTTATCAACTCGTCACACGTGTGTTTGTGTGTGGTAGCCCTATC
TATCTATCTATCTCGGGCCCGTGGTGACGGGTGCAGGCTTTCGATCGTCA
TTGTCGCCATCGCTGTTTGTAGCGCTAACAAGATCGCTGTCTTGTGTGCG
CCTACATATAGATGTGTGTGTTGGAACGAGTGCACACGGTGCGAGTTGTG
GGTTGAGGCTTTATTCCCGACGCCACTCTCTGAGTGTCTGTTTTCTATGG
AAGTAGCACTTGCGATTTCATGTAACTGTCAGGCCGACCTTTTTTGAGGC
CATAGCACGCACCAACGTGATGGGATAAGGGCATGGCTTCTACGACTGCT
GTGAAGCGAATGCGCTTGCGGTGTGTAGCTCGCATCAATCTTGTTTATGG
TTGTGGGTACTGGCTCTGCTGCTGCTGCTGCTGCTTTCGCGGCGGCGGCG
GCGGCTGCTCAGCTGCAGCCTTCTCGCGCAAAGCTTGAAAAGCTTTCACG
TTTTGTTTTCAAGGATGATGGTGTAGCTGATGCTGTGAATATAGATGTTG
TGTCAAAGTTAGAAATCTCAATCTTGCACCCAAGCCGAGAGTGGGCGGGT
TAGGTTAGCTCGATCCGTCGCGACACAGACACTCGTTCAAATTCCATTTG
GTAGCATGGAAGAGGGAGAGGATGCTAAACAGATGGATGCCCAAGCGTTT
TTTAATGTTGAGACAACAGCAGCTGTGCAAAACGTTTTCATGTGACTGCC
GTGTCACGATGCCAAGGTCTTCGGCCGACGAGGACGACAATGACGGGAGC
GAGGACGGGAACCGGGGGCTTGAAGCGCTTCGCGCAGCGAGAGCGGCGGC
GAAGGCAGCGGCGAACGAGGTCCTCGGCACTGACTCGGAAGAGGAGGAGG
AGGAGGAGGAAGAAGACGAGGATGATGAGGCTCGAGGGGGGGCAGTGGGT
GAGAGTTTTGAGGCAGGAGGGGGGCGACTCACACACCGCTCATATTCGCT
TGCCTTGGCCATGATCTTTCGCCCGCATCACCCCCGTTTCAAGGAGGAAC
AAGAATCGCTCCTACCCGTGACCTAGAAATACCGAGATGGGGGTAGGGGG
TATGCTCATGAAATCGCACACGCCATGGTCTTGAGGACATCGGCCAAACA
TCCCTGTATGCCGGTACAAAGGGTTTCGCTCTTTCATGGCAAGACGTATG
GGCTTTTTGGATGCGTAAGGAGGCCACAATCCACGGATGACTCTTGTGTT
TTGTTTCGCCGACGAGGACTGCGACAGCGGTAGGAAGCGGCAGGCTCGCG
TGCCGTGTTTGAACATACGAGGGAGTGGCGGGGCGTCGGGCAAGGGCTCT
CACTAGCTTCCTACCCGTTGTGTTTGGCTCTGGGTGACGCGCACTGCACG
CGCGAGAGAGAGCGCCCGAGTCCCCACTCGTAGGTATATGTACCCGCGAA
TTTGATCGACGTCCGATTGGGCGAAGCCGCCGATAGCGACCAAAATATAC
GTACCTCCCAAAACCAAATGACCGCAGGGAAGGGTAGGGGGCGTCGTCTA
GGGGGAGGGGGTACACGGATGTACGACGAGGAAGAGGAGGAGGAAGACGA
GGAGGAGGACGAGGAGGAGGGTGGAAGGGGCGTTGGGAAGCGCTCGAGAG
CGTCGCAGGAGGTGAGGGGATTGAGGAAGGAGCGGCACATCACATGTTGT
TGGGTACAGTGGCTCGGTTCGACTTCGTTCGGCGGGCTGCATGCCTTTGC
TTCACGCCGAGATACCTCTATCGTGTGCATGCATGCGGAAATGCTTAGCT
CGTGCTTCTTTTTTCTGTCAGGTGTGCACTACCTGAGCCGCGGAGGCATG
CCCTCATTTTCAATCTCATGCGTATTGTCGGCCCTGTGCATCGGGAAACC
ATTTACCGTGGCCGTTTGAATTTGACTTTGCCGTACGTCCTCGCACTCCT
CAGGGACGTAAGGGTGTTGCCGCTCAGTGAATGCCTGGGCTGCACTAGTA
AGCAGCATCGCCGCATGCCTCCACCAAGTCTAGCCTACTAGGGCAGTGGG
AGGGTGACTGCCTCCTGTCCGTGTTTTTTTTTTCAAATTCTTTTGCAGGT
CATCTTCGTTTCTTGTATTATCTCTTTTGTTTTTCTTCCTGTCCCCACAC
CTCCCACCCACCCACGCCCCCTCAATATCGCCGCCTATTTTTTCAATCTG
TTACCCCTGTTGCTCTCAGTCTCTCGATGTTTTGTCTCTGAAACGTGCAT
TTTCCCTGTTCAATCTCTTGGCTATGCCCCCCTCCCCCGTACCGCGCTTG
TCTGTATTTCCGCTACTACACCTAGGAGTCTACACCCGCTCGAAGCGGAA
AGCGCTCGCACCGGAGCATCGCCGAGGATAGCAGCGAGTCGGAGTAG
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Coding sequence (CDS) from alignment at P-lacustris_contig1039:33163..46309+

>mRNA_P-lacustris_contig1039.393.1 ID=mRNA_P-lacustris_contig1039.393.1|Name=mRNA_P-lacustris_contig1039.393.1|organism=Pleurocladia lacustris SAG_25_93|type=CDS|length=2550bp|location=Sequence derived from alignment at P-lacustris_contig1039:33163..46309+ (Pleurocladia lacustris SAG_25_93)
ATGGAAGACTCGCCCACTTCGGAAGCGCGGGCAGCAAGGATGATTACTGA
AGAGATGGAAGACTCGCCCACTTCGGAAGCGCGGGCAGCAAGGATGATTA
CTGAAGAGGACGAGGACAGCGCGTCGAGCGATAAAGGAGCTCCAACAGCG
TCTTCCGCAGCCGGCGGGAGAGGGCTGCTAGGGACCGGGTTGTCATCGGA
CAGCGAAGACGATGAGGCGAGCGGGGACGAGGACAGCGCGTCGAGCGATA
AAGGAGCTCCAACAGCGTCTTCCGCAGCCGGCGGGAGAGGGCTGCTAGGG
ACCGGGTTGTCATCGGACAGCGAAGACGATGAGGCGAGCGGGATTCCTGT
GTTGCCGCGGCCGCCTGCGGGAGCGGAGGTGATGGTTTCGCGGCTGCCTA
ATATTTTGGGCGTCAAGACGGAGGCTTTCGACCCTGACACGTACGAGGAA
GAAGCGATTCCTGTGTTGCCGCGGCCGCCTGCGGGAGCGGAGGTGATGGT
TTCGCGGCTGCCTAATATTTTGGGCGTCAAGACGGAGGCTTTCGACCCTG
ACACGTACGAGGAAGAAGCGGAGGCAGACGAGTTCAAGTTCACGACCAAC
ATCATCCGGTGGCGGCACAAGCGGGGCAGCCTCGGCCGGCCGGAGCTGGG
GGACGACGGCAGGGCCTTGAGAGAGAGCAACACCAGGCTGGTGCGTTGGA
GCAATGGGTCGACGCAGCTACTGGTCGGAGATGAGGCTTTCGACGTCGAG
GAGCACTCCATCGATAGGAGGCAGACGAGTTCAAGTTCACGACCAACATC
ATCCGGTGGCGGCACAAGCGGGGCAGCCTCGGCCGGCCGGAGCTGGGGGA
CGACGGCAGGGCCTTGAGAGAGAGCAACACCAGGCTGGTGCGTTGGAGCA
ATGGGTCGACGCAGCTACTGGTCGGAGATGAGGCTTTCGACGTCGAGGAG
CACTCCATCGATAGGAGCGCTTTGTTCGTGCAGCAGATGACCGAGGAGGG
CAGCGTCCTGCAGTGCCAGGGAGAGCTGACGAAGAAGATCTCTTTCAAGC
CTAGCAACGTTCTCAGCAAGGCTCACCGGACGCTAACCCTCGCCGTTAGA
AAGAGGGCAGTCAAGGGCTCGAGGATCAAGAAGTACGCTGAGACGGTCGA
CCCGGAGCAGGAGCGCTTTGTTCGTGCAGCAGATGACCGAGGAGGGCAGC
GTCCTGCAGTGCCAGGGAGAGCTGACGAAGAAGATCTCTTTCAAGCCTAG
CAACGTTCTCAGCAAGGCTCACCGGACGCTAACCCTCGCCGTTAGAAAGA
GGGCAGTCAAGGGCTCGAGGATCAAGAAGTACGCTGAGACGGTCGACCCG
GAGCAGGTCAAGATGGAGCGAGCCAGGGCAGAAGAGGCCCTCCACAAGCA
GGCCAGGCGTAAACATCAACACTACAACAAGTACTCCAACGAGGACGGGA
GCTCGCGCAGGCGACCGGCCATGAACATCGACTACCTCGAGGTCAAGATG
GAGCGAGCCAGGGCAGAAGAGGCCCTCCACAAGCAGGCCAGGCGTAAACA
TCAACACTACAACAAGTACTCCAACGAGGACGGGAGCTCGCGCAGGCGAC
CGGCCATGAACATCGACTACCTCGAGGAAGGAGCGTTCGACGACACGAGC
ATAAAGGCCATTAAGAAAAACGCCAAGGCCGGCCGATACGACCTCGGGAA
GGAGCGTTCGACGACACGAGCATAAAGGCCATTAAGAAAAACGCCAAGGC
CGGCCGATACGACCTCGGGTCTTCGGCCGACGAGGACGACAATGACGGGA
GCGAGGACGGGAACCGGGGGCTTGAAGCGCTTCGCGCAGCGAGAGCGGCG
GCGAAGGCAGCGGCGAACGAGGTCCTCGGCACTGACTCGGAAGAGGAGGA
GGAGGAGGAGGAAGAAGACGAGGATGATGAGGCTCGAGGGGGGGCAGTGG
GTGAGAGTCTTCGGCCGACGAGGACGACAATGACGGGAGCGAGGACGGGA
ACCGGGGGCTTGAAGCGCTTCGCGCAGCGAGAGCGGCGGCGAAGGCAGCG
GCGAACGAGGTCCTCGGCACTGACTCGGAAGAGGAGGAGGAGGAGGAGGA
AGAAGACGAGGATGATGAGGCTCGAGGGGGGGCAGTGGGTGAGAGGAAGG
GTAGGGGGCGTCGTCTAGGGGGAGGGGGTACACGGATGTACGACGAGGAA
GAGGAGGAGGAAGACGAGGAGGAGGACGAGGAGGAGGGTGGAAGGGGCGT
TGGGAAGCGCTCGAGAGCGTCGCAGGAGGGAAGGGTAGGGGGCGTCGTCT
AGGGGGAGGGGGTACACGGATGTACGACGAGGAAGAGGAGGAGGAAGACG
AGGAGGAGGACGAGGAGGAGGGTGGAAGGGGCGTTGGGAAGCGCTCGAGA
GCGTCGCAGGAGTCTACACCCGCTCGAAGCGGAAAGCGCTCGCACCGGAG
CATCGCCGAGGATAGCAGCGAGTCGGAGTAGTCTACACCCGCTCGAAGCG
GAAAGCGCTCGCACCGGAGCATCGCCGAGGATAGCAGCGAGTCGGAGTAG
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