Homology
BLAST of mRNA_P-lacustris_contig1032.363.1 vs. uniprot
Match:
D8LBX7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBX7_ECTSI)
HSP 1 Score: 947 bits (2448), Expect = 0.000e+0
Identity = 584/981 (59.53%), Postives = 653/981 (66.56%), Query Frame = 1
Query: 1 VAAGSDGSTTAVAGIIDRAALYNVESETTMAAGRHLGTLDSIDGAAPTTSCTVWMEDGSNDGGTLGDGKSFRLPSPVFRSFFGAELSRR--ASTQSCVPCPTRPSSDPGAVKSTPKTASVALVGDRTGTVRWSPMPPCPGVPGSVLACLPGEKTAIVAILPQLQGESRAVGVLLVGANGVVLSLTATAESVEPSHSRVSRKRPRPDDAEANGRSEGGRSRAGGGERTTAVEIYSRASPA----------VRTRNPQPPPLSSVRRRHLGLPFPVDAACSVPGFLVHCHAGALFATAVPTAREGHEETGLPLVTH--SNRSKRLGLSGVSAPVLPLRPVRLPLHCDTVGVAVAPVFTAEVEGARATSSGDTDAGVRQTLVLSLSARGRLVGFMAPQSAKELEGWALDTGKGGVRVGGSAGVERRVRCQLERLSSLGRQCAVLSAESAERDREIRLLRGATVLMPPLAXXXXXXXXXXXXGGL-HGPWQSLGHSLSMAPDMQDAAAGFVDSYGGGSDTTQHDALRVRLCVRLWPRDGDRAREELQTV--GEDHGTGRWFIVTRIVEAGSGSSSSSSLSEGISDDAEKLGEGWAWSTSAIVPMGFLSXXXXXXXXAALTLPSACPVTVNSWLQFRFGANADDNGIDGDHRLTAGIRQDPHEEAAGVCVELGSSRFDVFDWGTKLPSVPRSAAAIRMVSRGRGFSFCGPELAIADVFDRCSSGSGGVEGGGGHREDG---------------GLGIDSTKVCPTVPAAWSSFRLRVASPDRDAGALLALLLPSLASSPPTSARNGVGGDGRSGVGDGPAEAAIRVAGQVAVIRMTGCALTAADEGG-----FGGRAVEVAVTCSHAAMAPLVREALLSRAGALMDAPPKNDRGRGSDVGKCSGGSGSEDSFVRQQGDAVAQLVRDVYPIGQAVVDVGDAARALGAARASDGPSAKSAEEALALMHRVGEVYHRLRLQQAAVGLLL 2832
+AA DG+T AVAGIIDRAA Y+V SET GRHLG LD IDGAAPTTSCTVW EDGS LGDGK F LP VFR FGAELSRR A+ S PT S D A ++ KTA+V LVGD TG+VRWSP+PP GV G +LACLPGEKTA+VA LP+L ESRA+GVL+VGANG +LSLTA A S ++SRKRPRPDD EA AGG V TR+ Q PP SV R LGLPFPV +ACS PGFLVHCHAGALFATA+P A G E + H S+R R+G+ G S VLPLRPVRLPL CDTVGVAVAPV A EGA TSS DT AG +TLVLS SA GRLVGFMAPQS ELEGW+LDTGKGGVR GG AGVERRVRCQLERLSSLGRQCA LSA SAERDREIR+LRGATVL+PPLA GG H P ++LGHS+SMAPD Q AAGF D+YGGG Q DALRVRLCVRLWPR+G RA ELQTV GED G GRWF+VTRIVE G+ E +GEGWAWSTS++VPMG L XXXX AALTLPSA PVTV SWLQFR+GAN DG ++ H+EAAGVCVELGSSRFDV DWG +LPSVPRSAAA+R SRGRG SFCGP+LAIADVF S +GG + G+ ST P VPA+WSSFRL V PDRDAGALLALL+P DG AE A+RVAGQVA++R T CA + G G A EVAVTCSHAAMAPLVREAL+ RAG+L+ + P+N RGR VG SGGSGS + VRQQGDA A+L R++YP+ QAV DVGDAARALGA RA DGPS KSA+EALALM+R+GE+Y LR QQ GL+L
Sbjct: 1 MAACRDGATAAVAGIIDRAASYDVRSETPTLVGRHLGALDGIDGAAPTTSCTVWAEDGS---AALGDGKGFPLPLSVFRLLFGAELSRRRGAAPPSPTQRPTGQSPDLSAART--KTATVVLVGDGTGSVRWSPVPPLAGVSGGILACLPGEKTAVVATLPELDVESRAIGVLVVGANGTLLSLTA-AGSAGSCRGKISRKRPRPDDVEA---------MAGGXXXXXXXXXXXXXXXXXXXXXXXXQLVETRSEQAPP-PSVCWRRLGLPFPVASACSAPGFLVHCHAGALFATALPMASGGPAEADNLSLAHQLSSRPTRVGVRGASPAVLPLRPVRLPLPCDTVGVAVAPVLAAAAEGAGTTSS-DTTAGFLRTLVLSFSAGGRLVGFMAPQSVGELEGWSLDTGKGGVRAGGGAGVERRVRCQLERLSSLGRQCAALSAVSAERDREIRVLRGATVLLPPLAAASASARNGNGTGGASHTPSETLGHSVSMAPDTQQEAAGFGDAYGGGPGAVQADALRVRLCVRLWPREGGRASGELQTVAEGEDGGAGRWFVVTRIVEEDGGTGXX--XXXXXXXXXENVGEGWAWSTSSMVPMGPLCQGXXXXCSAALTLPSARPVTVTSWLQFRYGANGGGGDWDGGSPGGGTGGENAHDEAAGVCVELGSSRFDVLDWGVRLPSVPRSAAAVRAASRGRGSSFCGPDLAIADVFGGSPSAAGGRKXXXXXXXXXXXXXXXXXXXXXXXXGMRAVSTAARPAVPASWSSFRLHVRCPDRDAGALLALLVPXX------XXXXXXXXXXXXXXXDGQAEVAVRVAGQVAIVRATDCAPAGGEGDGRARAAAGPTAAEVAVTCSHAAMAPLVREALVRRAGSLLVSSPENGRGREPGVGN-SGGSGSGEIGVRQQGDAAARLAREIYPMRQAVADVGDAARALGAERAGDGPSTKSAKEALALMYRMGEIYQSLRRQQETAGLVL 955
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig1032.363.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 1
0 1 Expect = 0.00e+0 / Id = 59.53 Sequence D8LBX7_ECTSI
Match Name E-value Identity Description
D8LBX7_ECTSI 0.000e+0 59.53 Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Hectar predicted targeting category other localisation Ec32 ortholog description hypothetical protein Ec32 ortholog Ec-20_003670.1 Exons 1 Model size 2835 Cds size 2835 Stop 1 Start 0
Relationships
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1622815302.8831944-CDS-P-lacustris_contig1032:19412..22247 1622815302.8831944-CDS-P-lacustris_contig1032:19412..22247 Pleurocladia lacustris SAG_25_93 CDS P-lacustris_contig1032 19413..22247 - 1693493463.1374938-CDS-P-lacustris_contig1032:19412..22247 1693493463.1374938-CDS-P-lacustris_contig1032:19412..22247 Pleurocladia lacustris SAG_25_93 CDS P-lacustris_contig1032 19413..22247 -
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-lacustris_contig1032.363.1
>prot_P-lacustris_contig1032.363.1 ID=prot_P-lacustris_contig1032.363.1|Name=mRNA_P-lacustris_contig1032.363.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=945bp
VAAGSDGSTTAVAGIIDRAALYNVESETTMAAGRHLGTLDSIDGAAPTTS back to top mRNA from alignment at P-lacustris_contig1032:19413..22247-
Legend: CDS polypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-lacustris_contig1032.363.1 ID=mRNA_P-lacustris_contig1032.363.1|Name=mRNA_P-lacustris_contig1032.363.1|organism=Pleurocladia lacustris SAG_25_93|type=mRNA|length=2835bp|location=Sequence derived from alignment at P-lacustris_contig1032:19413..22247- (Pleurocladia lacustris SAG_25_93)GTGGCAGCTGGCAGCGACGGATCAACCACTGCGGTCGCCGGTATCATCGA
CCGCGCCGCTTTGTACAACGTTGAGAGCGAGACCACGATGGCGGCAGGAC
GGCACCTCGGCACCCTTGATAGCATCGACGGGGCTGCGCCGACGACTTCA
TGCACGGTATGGATGGAGGATGGTAGCAACGATGGTGGCACCTTGGGCGA
CGGTAAGAGCTTCCGGTTACCCTCGCCGGTGTTCCGCTCGTTTTTCGGCG
CAGAGCTTTCCCGCCGGGCGTCGACTCAGTCGTGCGTGCCGTGTCCTACG
AGACCGTCGTCTGACCCCGGCGCAGTAAAGTCGACGCCGAAGACGGCCTC
GGTGGCCTTGGTCGGAGACCGAACAGGCACTGTGAGATGGTCCCCGATGC
CCCCGTGCCCCGGGGTTCCTGGTAGTGTGCTCGCTTGTCTGCCTGGAGAG
AAAACGGCGATCGTTGCCATACTGCCTCAGCTTCAGGGCGAGTCACGAGC
GGTCGGAGTGCTGCTCGTCGGTGCTAACGGTGTCGTGTTGAGTCTCACCG
CTACTGCCGAAAGTGTCGAACCATCGCACAGCAGGGTTTCAAGAAAACGG
CCGCGACCCGACGACGCTGAGGCGAATGGTCGCAGCGAAGGAGGGAGGAG
TAGGGCAGGCGGAGGAGAAAGAACGACCGCCGTGGAGATTTACAGCCGGG
CGTCGCCGGCGGTACGAACCAGAAATCCGCAACCACCACCATTGTCGTCG
GTCCGTCGACGCCATCTCGGGCTGCCCTTCCCAGTCGATGCAGCCTGTTC
TGTACCTGGGTTCCTCGTGCACTGTCATGCCGGCGCCCTTTTCGCAACGG
CCGTGCCGACGGCGAGGGAAGGTCACGAAGAGACGGGCCTGCCACTCGTA
ACGCACTCGAACCGTTCGAAAAGATTGGGTCTATCGGGCGTCTCTGCCCC
GGTACTCCCTCTTCGCCCGGTGCGCCTGCCGTTGCATTGTGATACGGTCG
GTGTGGCCGTGGCACCTGTGTTCACCGCCGAAGTCGAAGGAGCGCGCGCG
ACCTCCTCCGGGGACACCGACGCTGGTGTGCGACAAACTCTTGTGTTGTC
GCTGTCGGCCCGGGGCCGACTAGTGGGATTCATGGCTCCGCAATCTGCGA
AGGAGCTAGAGGGCTGGGCTTTGGACACTGGGAAGGGAGGTGTGAGGGTC
GGCGGCAGCGCTGGCGTGGAGCGCCGTGTACGGTGCCAGTTGGAGCGGCT
GTCGAGCCTGGGAAGGCAGTGCGCGGTGCTCTCCGCGGAGTCGGCAGAGC
GAGACCGTGAGATTCGCCTGCTTCGGGGAGCGACAGTGTTGATGCCTCCG
CTCGCTGCTGCAATCGCATCTCGGCGGCGACGGAACGACGACGGGGGCTT
ACACGGGCCGTGGCAGTCTTTGGGGCACAGCCTCTCAATGGCCCCGGACA
TGCAGGACGCCGCCGCGGGGTTTGTGGACTCATACGGCGGCGGATCAGAC
ACGACTCAGCATGATGCCCTCCGGGTGCGGCTGTGCGTACGGCTTTGGCC
TCGAGACGGAGATCGCGCGAGGGAGGAGCTTCAGACCGTCGGAGAGGATC
ACGGCACCGGCCGATGGTTCATCGTAACCAGAATCGTGGAGGCGGGCAGC
GGCAGCAGCAGCAGCAGCAGCCTCAGCGAAGGTATAAGCGATGATGCTGA
GAAACTGGGAGAGGGATGGGCCTGGTCGACGTCCGCCATAGTGCCGATGG
GTTTCTTGAGCCAGGGGTGGCCCTGGAGCTATTCTGCCGCACTCACTCTG
CCATCCGCATGCCCCGTAACTGTCAACTCGTGGCTACAATTCCGGTTCGG
CGCGAATGCTGATGACAACGGTATTGACGGGGATCATAGGCTCACTGCTG
GCATAAGACAAGACCCGCATGAGGAAGCTGCAGGGGTTTGCGTGGAGCTT
GGGAGCTCGCGCTTCGACGTCTTCGATTGGGGGACCAAACTTCCCTCCGT
CCCGCGAAGCGCGGCTGCAATTCGTATGGTCTCTCGCGGCCGCGGCTTCA
GCTTCTGTGGACCTGAACTGGCGATCGCGGACGTCTTTGACAGATGCTCC
TCTGGCAGCGGCGGCGTGGAAGGCGGCGGTGGCCATAGAGAGGACGGAGG
ATTGGGGATAGACTCGACCAAGGTGTGCCCAACGGTACCAGCTGCTTGGA
GCAGCTTCCGGCTACGCGTGGCGAGCCCTGACCGTGACGCCGGCGCGTTG
TTGGCTCTCCTGCTACCGTCTTTGGCATCTTCGCCTCCCACTTCAGCCAG
AAACGGCGTCGGCGGTGACGGTCGCAGCGGTGTCGGTGACGGTCCGGCGG
AAGCAGCCATCCGGGTGGCGGGGCAAGTGGCGGTTATCCGTATGACCGGC
TGTGCGCTAACGGCGGCGGATGAGGGAGGATTCGGCGGTCGGGCTGTAGA
GGTGGCTGTGACGTGCTCACACGCAGCGATGGCCCCGCTCGTCCGAGAGG
CACTCCTAAGTCGGGCGGGGGCGCTGATGGATGCGCCACCGAAGAACGAT
CGAGGACGAGGGTCAGATGTTGGCAAGTGCAGCGGCGGCAGTGGGAGTGA
GGATAGTTTCGTAAGGCAACAGGGGGATGCCGTGGCGCAGCTGGTGCGCG
ACGTCTACCCAATAGGACAGGCCGTTGTGGACGTAGGCGACGCGGCGAGG
GCGTTAGGTGCGGCTCGCGCGAGCGACGGGCCCAGCGCCAAGAGCGCCGA
GGAAGCGCTGGCGCTCATGCACAGAGTAGGAGAGGTTTATCACCGTCTCC
GACTCCAGCAAGCAGCCGTTGGTTTGTTGCTGTAG back to top Coding sequence (CDS) from alignment at P-lacustris_contig1032:19413..22247-
>mRNA_P-lacustris_contig1032.363.1 ID=mRNA_P-lacustris_contig1032.363.1|Name=mRNA_P-lacustris_contig1032.363.1|organism=Pleurocladia lacustris SAG_25_93|type=CDS|length=5670bp|location=Sequence derived from alignment at P-lacustris_contig1032:19413..22247- (Pleurocladia lacustris SAG_25_93) back to top