mRNA_P-lacustris_contig1022.300.1 (mRNA) Pleurocladia lacustris SAG_25_93
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_P-lacustris_contig1022.300.1 vs. uniprot
Match: D8LST8_ECTSI (Peptidylprolyl isomerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LST8_ECTSI) HSP 1 Score: 317 bits (811), Expect = 2.810e-96 Identity = 170/211 (80.57%), Postives = 189/211 (89.57%), Query Frame = 1 Query: 238 AQADKKAEALKRSRRKDAADAGT----SPETG--TTTPSAMDSRSGTV-SGSASASSGELRVTQVGKKPAVCGTKTKAGDLIEFRYSARLASDLSVEFDSSDRRGTGLPYAIVLENGDVVKGLDLSLFDMCVGERRKIEIPARLAYGKKGSKLFGIPPDDGAGSADVVYGVELVSINFSTNSANARDNFYTDDPCDAAAFAAGNASGQCKK 849
A+AD+KAEA+KR ++K AADA + +P+TG T +A+D RSG+V +G SASSGELRVTQVGKKP VCGT+TKAGDLIEFRYSARLASDLSVEFDSSDRRGTGLPYAIVL NGDVVKGLDLSLFDMCVGERRKIEIPARLAYG+KGSK FG+PPDDG GSADVV+GVELVSINFS N+++ARDNFYTDDPCDAAA AAGNASGQCKK
Sbjct: 269 AEADRKAEAVKRRKQKAAADAASPETAAPDTGDSATATTAVDPRSGSVGNGGGSASSGELRVTQVGKKPEVCGTRTKAGDLIEFRYSARLASDLSVEFDSSDRRGTGLPYAIVLGNGDVVKGLDLSLFDMCVGERRKIEIPARLAYGRKGSKAFGVPPDDGTGSADVVFGVELVSINFSINASDARDNFYTDDPCDAAAVAAGNASGQCKK 479
BLAST of mRNA_P-lacustris_contig1022.300.1 vs. uniprot
Match: A0A835Z5N8_9STRA (Peptidylprolyl isomerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5N8_9STRA) HSP 1 Score: 158 bits (400), Expect = 4.420e-40 Identity = 83/141 (58.87%), Postives = 105/141 (74.47%), Query Frame = 1 Query: 430 CGTKTKAGDLIEFRYSARLASDLSVEFDSSDRRGTGLPYAIVLENGDVVKGLDLSLFDMCVGERRKIEIPARLAYGKKGSKLFGIPPDDGAGSADVVYGVELVSINFSTNSANARD-NFYTDDPCDAAAFAAGNASGQCKK 849
CG ++ GDLIE RY+AR+A D E+D+SD+RGTG PYAI L GDVV+GLDLSL+DMC+GERR++E+PA LAYG KG+ LFG+P A SA +V+GV+LVSIN T+ RD N+YT DPC+ A AG ASG C +
Sbjct: 127 CGMVSQEGDLIEIRYTARIA-DTMREYDASDKRGTGQPYAITLGRGDVVRGLDLSLYDMCIGERRRVEVPAGLAYGAKGNSLFGVP----ANSA-LVFGVQLVSINGVTDETATRDSNYYTGDPCNDEARRAGVASGLCDR 261
BLAST of mRNA_P-lacustris_contig1022.300.1 vs. uniprot
Match: A0A7S0KXW8_9STRA (Peptidylprolyl isomerase n=1 Tax=Asterionellopsis glacialis TaxID=33640 RepID=A0A7S0KXW8_9STRA) HSP 1 Score: 123 bits (309), Expect = 4.460e-29 Identity = 63/133 (47.37%), Postives = 86/133 (64.66%), Query Frame = 1 Query: 394 LRVTQVGKKPAVCGTKTKAGDLIEFRYSARLASDLSVEFDSSDRRGTGLPYAIVLENGDVVKGLDLSLFDMCVGERRKIEIPARLAYGKKGSKLFGIPPDDGAGSADVVYGVELVSINF--STNSANARDNFY 786
L + +V +CG K++ GD++E Y AR+AS +DSS++RGTG PY VL NGDV+KG+DL LFDMC GE R+++IP+ L YG+KGS LF IP G + + VELV +NF N+A R+ Y
Sbjct: 12 LVIKKVSPPGGICGIKSRRGDVLEINYEARVASPGGPIYDSSEQRGTGQPYQFVLGNGDVIKGVDLGLFDMCPGEVRELDIPSALGYGRKGSILFDIP-----GDVRLWWKVELVRLNFVGEGNNAKTREELY 139
BLAST of mRNA_P-lacustris_contig1022.300.1 vs. uniprot
Match: A0A1Z5KS47_FISSO (Peptidylprolyl isomerase n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KS47_FISSO) HSP 1 Score: 107 bits (266), Expect = 6.580e-22 Identity = 49/111 (44.14%), Postives = 74/111 (66.67%), Query Frame = 1 Query: 415 KKPAVCGTKTKAGDLIEFRYSARLASDLSVEFDSSDRRGTGLPYAIVLENGDVVKGLDLSLFDMCVGERRKIEIPARLAYGKKGSKLFGIPPDDGAGSADVVYGVELVSIN 747
+K C +++ GD++E +Y AR S +DSS+RRGTG PY +VL +GD++ G+DL L+DMC GE R ++IP L YG KG+K+F +PPD + + V+L++IN
Sbjct: 160 QKTTKCSLQSRRGDVLEIKYEARFQSPQGPIYDSSERRGTGRPYQMVLGSGDILAGVDLGLYDMCPGEIRTLQIPPPLGYGPKGNKMFRVPPD-----TTLFWKVQLMTIN 265
BLAST of mRNA_P-lacustris_contig1022.300.1 vs. uniprot
Match: A0A8J6CFR5_DIALT (Peptidylprolyl isomerase n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CFR5_DIALT) HSP 1 Score: 105 bits (263), Expect = 4.620e-20 Identity = 50/117 (42.74%), Postives = 72/117 (61.54%), Query Frame = 1 Query: 430 CGTKTKAGDLIEFRYSARLASDLSVEFDSSDRRGTGLPYAIVLENGDVVKGLDLSLFDMCVGERRKIEIPARLAYGKKGSKLFGIPPDDGAGSADVVYGVELVSINFSTNSANARDN 780
C +++ GD IE Y RLA DSS RG G P+A+ L NGDV + L+L ++DMC+GE R+I P RLAYG G++ G+PP+ A +V+ V + +INF T+ A R++
Sbjct: 446 CAIRSRKGDTIEIEYETRLADATQRVIDSSFMRGIGAPFALQLGNGDVPRALELGIYDMCIGEARRIVAPPRLAYGLAGNRALGVPPN-----ATIVFDVTMSAINFQTDPATRRED 557
BLAST of mRNA_P-lacustris_contig1022.300.1 vs. uniprot
Match: A0A7S2ET29_TRICV (Peptidylprolyl isomerase n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2ET29_TRICV) HSP 1 Score: 101 bits (252), Expect = 1.790e-19 Identity = 50/111 (45.05%), Postives = 70/111 (63.06%), Query Frame = 1 Query: 415 KKPAVCGTKTKAGDLIEFRYSARLASDLSVEFDSSDRRGTGLPYAIVLENGDVVKGLDLSLFDMCVGERRKIEIPARLAYGKKGSKLFGIPPDDGAGSADVVYGVELVSIN 747
+K C K++ GD++E Y AR+ +DSS RGTG PY VL +GDV+KG+DL ++DMC GE R++ +P+ LAYG+ GSKL+ IP V + VELV +N
Sbjct: 259 RKGGSCEIKSRRGDVLEMNYEARVGGRDGQVYDSSAERGTGQPYMFVLGSGDVIKGVDLGMYDMCPGEVRELSVPSELAYGRLGSKLYRIPS-----GFRVWWKVELVRVN 364
BLAST of mRNA_P-lacustris_contig1022.300.1 vs. uniprot
Match: UPI001CB97191 (FK506-binding protein 2-like n=1 Tax=Erigeron canadensis TaxID=72917 RepID=UPI001CB97191) HSP 1 Score: 88.2 bits (217), Expect = 1.240e-16 Identity = 54/138 (39.13%), Postives = 76/138 (55.07%), Query Frame = 1 Query: 373 ASASSGELRVTQVG--KKPAVCGTKTKAGDLIEFRYSARLASDLSVEFDSSDRRGTGLPYAIVLENGDVVKGLDLSLFDMCVGERRKIEIPARLAYGKKGSKLFGIPPDDGAGSADVVYGVELVSINFSTNSANARDN 780
ASA S ++ Q+G KPA C + GD I+ Y +L FDSS RGT P+ VL +G V+KG D L MCVGE+RK++IPA++ YG +GS P G A +++ EL+S+N +S +N
Sbjct: 30 ASAKSTDVTELQIGVKHKPASCEMQAHKGDKIKVHYRGKLTD--GTVFDSSFERGT--PFEFVLGSGQVIKGWDQGLLGMCVGEKRKLKIPAKMGYGDQGS------PPKIPGGATLIFDTELISVNGKGSSVGGVNN 157
BLAST of mRNA_P-lacustris_contig1022.300.1 vs. uniprot
Match: A0A7S0I5I9_9EUKA (Peptidylprolyl isomerase n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0I5I9_9EUKA) HSP 1 Score: 90.1 bits (222), Expect = 2.090e-16 Identity = 48/118 (40.68%), Postives = 69/118 (58.47%), Query Frame = 1 Query: 430 CGTKTKAGDLIEFRYSARLASDL--SVEFDSSDRRGTGLPYAIVLENGDV-VKGLDLSLFDMCVGERRKIEIPARLAYGKKGSKLFGIPPDDGAGSADVVYGVELVSINFSTNSANAR 774
C T+ D +EF Y A A+ +V FDSS +R P+A+ L NG GL+L L +MC+GE R + +P L +G++G+KL+G+PPD + Y V LVSIN T+ A+ R
Sbjct: 130 CSMLTRVADTVEFEYEASYATATGGTVMFDSSAQRSRR-PFAMALGNGGAQTAGLELGLLEMCIGEERTLRVPPELGFGRRGNKLYGVPPD-----TPLTYRVRLVSINMQTDPASDR 241
BLAST of mRNA_P-lacustris_contig1022.300.1 vs. uniprot
Match: A0A103Y780_CYNCS (Peptidylprolyl isomerase n=1 Tax=Cynara cardunculus var. scolymus TaxID=59895 RepID=A0A103Y780_CYNCS) HSP 1 Score: 87.4 bits (215), Expect = 3.130e-16 Identity = 52/137 (37.96%), Postives = 74/137 (54.01%), Query Frame = 1 Query: 376 SASSGELRVTQVG--KKPAVCGTKTKAGDLIEFRYSARLASDLSVEFDSSDRRGTGLPYAIVLENGDVVKGLDLSLFDMCVGERRKIEIPARLAYGKKGSKLFGIPPDDGAGSADVVYGVELVSINFSTNSANARDN 780
SA SG++ Q+G KPA C + GD I+ Y +L FDSS RGT P+ L +G V+KG D L MCVGE+RK++IPA++ YG +GS P G A +++ EL+++N + DN
Sbjct: 44 SAKSGDVTELQIGVKHKPASCAVQAHKGDKIKVHYRGKLTD--GTVFDSSFERGT--PFEFELGSGQVIKGWDQGLLGMCVGEKRKLKIPAKMGYGDRGS------PPKIPGGATLIFDTELIAVNGKGSGEGNIDN 170
BLAST of mRNA_P-lacustris_contig1022.300.1 vs. uniprot
Match: UPI001CF76C05 (peptidyl-prolyl cis-trans isomerase FKBP7 isoform X2 n=1 Tax=Varanus komodoensis TaxID=61221 RepID=UPI001CF76C05) HSP 1 Score: 87.4 bits (215), Expect = 4.640e-16 Identity = 48/124 (38.71%), Postives = 70/124 (56.45%), Query Frame = 1 Query: 421 PAVCGTKTKAGDLIEFRYSARLASDLSVEFDSSDRRGTGLPYAIVLENGDVVKGLDLSLFDMCVGERRKIEIPARLAYGKKGSKLFGIPPDDGAGSADVVYGVELVSINFSTNSANARDNFYTD 792
P C TK+K GD++ Y LASD + +F S + G P VL G V+KGLD+++ DMC GE+RK+ IP LAYG++G + IPP+ A +++ +EL ++ S A TD
Sbjct: 61 PKNCETKSKRGDMLNAHYDGYLASD-NTKFYCSRTQNDGHPKWFVLGVGQVIKGLDIAMMDMCPGEKRKVIIPPSLAYGERGYEPAKIPPN-----ATLIFEIELYAVTQGPRSIKAFSQIDTD 178 The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig1022.300.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-lacustris_contig1022.300.1 >prot_P-lacustris_contig1022.300.1 ID=prot_P-lacustris_contig1022.300.1|Name=mRNA_P-lacustris_contig1022.300.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=171bp MDSRSGTVSGSASASSGELRVTQVGKKPAVCGTKTKAGDLIEFRYSARLAback to top mRNA from alignment at P-lacustris_contig1022:2879..7594+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-lacustris_contig1022.300.1 ID=mRNA_P-lacustris_contig1022.300.1|Name=mRNA_P-lacustris_contig1022.300.1|organism=Pleurocladia lacustris SAG_25_93|type=mRNA|length=4716bp|location=Sequence derived from alignment at P-lacustris_contig1022:2879..7594+ (Pleurocladia lacustris SAG_25_93)back to top Coding sequence (CDS) from alignment at P-lacustris_contig1022:2879..7594+ >mRNA_P-lacustris_contig1022.300.1 ID=mRNA_P-lacustris_contig1022.300.1|Name=mRNA_P-lacustris_contig1022.300.1|organism=Pleurocladia lacustris SAG_25_93|type=CDS|length=1026bp|location=Sequence derived from alignment at P-lacustris_contig1022:2879..7594+ (Pleurocladia lacustris SAG_25_93)back to top |