Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | no signal peptide or anchor |
| Exons | 2 |
| Model size | 175 |
| Cds size | 174 |
| Stop | 0 |
| Start | 0 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815289.2408895-CDS-P-lacustris_contig102:256567..256652 | 1622815289.2408895-CDS-P-lacustris_contig102:256567..256652 | Pleurocladia lacustris SAG_25_93 | CDS | P-lacustris_contig102 256568..256652 - |
| 1693493453.5902061-CDS-P-lacustris_contig102:256567..256652 | 1693493453.5902061-CDS-P-lacustris_contig102:256567..256652 | Pleurocladia lacustris SAG_25_93 | CDS | P-lacustris_contig102 256568..256652 - |
| 1622815289.2518215-CDS-P-lacustris_contig102:257212..257301 | 1622815289.2518215-CDS-P-lacustris_contig102:257212..257301 | Pleurocladia lacustris SAG_25_93 | CDS | P-lacustris_contig102 257213..257301 - |
| 1693493453.6080632-CDS-P-lacustris_contig102:257212..257301 | 1693493453.6080632-CDS-P-lacustris_contig102:257212..257301 | Pleurocladia lacustris SAG_25_93 | CDS | P-lacustris_contig102 257213..257301 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-lacustris_contig102.283.1 >prot_P-lacustris_contig102.283.1 ID=prot_P-lacustris_contig102.283.1|Name=mRNA_P-lacustris_contig102.283.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=58bp
KLEVTRYSTLPQLDKALRKVEANLELESERVSPSGNNNKVLQQHPSATSG
VVNTMLTY back to topmRNA from alignment at P-lacustris_contig102:256567..257301- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-lacustris_contig102.283.1 ID=mRNA_P-lacustris_contig102.283.1|Name=mRNA_P-lacustris_contig102.283.1|organism=Pleurocladia lacustris SAG_25_93|type=mRNA|length=735bp|location=Sequence derived from alignment at P-lacustris_contig102:256567..257301- (Pleurocladia lacustris SAG_25_93)
AAGCTGGAGGTGACGCGTTATTCGACCTTACCGCAGCTGGACAAAGCTCT
ACGGAAAGTGGAGGCCAACCTCGAGTTGGAGTCCGAAAGGTAATTGCTGT
TGATTCATTAGGATAGTAGCACGACGAAATACGAAGTGACTTCGGCCCAT
GTGTTGATATGGCACGAGTGGTTTAGGTTTTCTATGCATTCCCGAACGCT
CGTTGTATTCACTCCTTCCTTAGGCTGTCGAAAACGGAGCTCCGAAAATC
AAAATTGAAAAATCGAAATCAAAATTGTATCTGACTGGTCGTTTCACATC
ACACGCCTCCATACGTCTTGTTATATACTGGGGACACAAAGAAGTAGCTG
GGGACTTTTGAAATCAAATCCGAATCCCCAACGTGCAATTTTGATTGGTA
TGCTTTCCATGGGACGCCTCCCCAATTATGATTTTGATTTGATTTCGAGA
ACGTCATTAACACTGGCCCGTACATTTGTTTTGGCACTAAACTTTTGAAA
AGGTCGAATTACCCCTCCTTAGTTGGCCCCCGTGGAACCGATTTCCCCAA
ACTCTCGTACACTTTCGACGCAAGTGTTTCTCTCCTGTCCGCTATGATAT
CAATGGCTTCTCCTCTTCCCCTGCGCTGTTGCTGTCGGATGGTGGACAGA
GTATCGCCCAGTGGCAACAACAACAAGGTCCTGCAGCAGCACCCTTCCGC
TACCAGCGGGGTTGTGAACACGATGCTGACATATT back to topCoding sequence (CDS) from alignment at P-lacustris_contig102:256567..257301- >mRNA_P-lacustris_contig102.283.1 ID=mRNA_P-lacustris_contig102.283.1|Name=mRNA_P-lacustris_contig102.283.1|organism=Pleurocladia lacustris SAG_25_93|type=CDS|length=348bp|location=Sequence derived from alignment at P-lacustris_contig102:256567..257301- (Pleurocladia lacustris SAG_25_93)
AAGCTGGAGGTGACGCGTTATTCGACCTTACCGCAGCTGGACAAAGCTCT
ACGGAAAGTGGAGGCCAACCTCGAGTTGGAGTCCGAAAGAAGCTGGAGGT
GACGCGTTATTCGACCTTACCGCAGCTGGACAAAGCTCTACGGAAAGTGG
AGGCCAACCTCGAGTTGGAGTCCGAAAGAGTATCGCCCAGTGGCAACAAC
AACAAGGTCCTGCAGCAGCACCCTTCCGCTACCAGCGGGGTTGTGAACAC
GATGCTGACATATAGTATCGCCCAGTGGCAACAACAACAAGGTCCTGCAG
CAGCACCCTTCCGCTACCAGCGGGGTTGTGAACACGATGCTGACATAT back to top
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