Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Model size | 241 |
| Cds size | 240 |
| Stop | 0 |
| Start | 0 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815289.1944454-CDS-P-lacustris_contig102:26340..26418 | 1622815289.1944454-CDS-P-lacustris_contig102:26340..26418 | Pleurocladia lacustris SAG_25_93 | CDS | P-lacustris_contig102 26341..26418 - |
| 1693493453.5710166-CDS-P-lacustris_contig102:26340..26418 | 1693493453.5710166-CDS-P-lacustris_contig102:26340..26418 | Pleurocladia lacustris SAG_25_93 | CDS | P-lacustris_contig102 26341..26418 - |
| 1622815289.2056441-CDS-P-lacustris_contig102:26926..27088 | 1622815289.2056441-CDS-P-lacustris_contig102:26926..27088 | Pleurocladia lacustris SAG_25_93 | CDS | P-lacustris_contig102 26927..27088 - |
| 1693493453.5810013-CDS-P-lacustris_contig102:26926..27088 | 1693493453.5810013-CDS-P-lacustris_contig102:26926..27088 | Pleurocladia lacustris SAG_25_93 | CDS | P-lacustris_contig102 26927..27088 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-lacustris_contig102.266.1 >prot_P-lacustris_contig102.266.1 ID=prot_P-lacustris_contig102.266.1|Name=mRNA_P-lacustris_contig102.266.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=80bp
FGLGVGFGGCDARSGRGRKDSLRNRRGRKRNLRPRMAGVHPRLEKERLLQ
HQNMVKQRLDEGLSGGEAFKFLLRLVATHF back to topmRNA from alignment at P-lacustris_contig102:26341..27088- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-lacustris_contig102.266.1 ID=mRNA_P-lacustris_contig102.266.1|Name=mRNA_P-lacustris_contig102.266.1|organism=Pleurocladia lacustris SAG_25_93|type=mRNA|length=748bp|location=Sequence derived from alignment at P-lacustris_contig102:26341..27088- (Pleurocladia lacustris SAG_25_93)
TTCGGGCTCGGGGTAGGGTTCGGCGGTTGCGACGCAAGGAGCGGCCGAGG
GAGGAAGGACAGCCTTCGGAATCGGAGGGGGAGGAAGAGAAATCTTCGGC
CTCGGATGGCGGGAGTGCATCCGCGTCTGGAGAAGGAGAGGCTTCTCCAA
CATCAGAACATGGTGAGACCATGTCCAGATTGATGAGCTCTCTTCGTTCC
CCTCGTCCCAAGCCTCGTAGGGTTCCCCCTTTGTCTTCCGTGGCAGACTC
CAACCGTGGTTGGATGTCGCGCAACAGTGTGTCGGTAGTACACAATGGTC
TCCCCCTTGGTCCCAGTTGGCTCGCACGCGTCAGGCTGAGTTGGAAGAGG
CAGCGAAGTTGGTCGAGATAGCTCGCGTTCGAGATATCGCCACCAACTAC
ACGAAAACCAAGTTGCGTGAGATTAAAATCCACCCCCGCATGCCATGGCA
GCCAAGCCTTAAAAACGCGGTGCCACAGCTCCTAGACTCCATCTCTGCCG
CGGTCCTCGACATTCTGCAACAAGCGGACCCGTTTATCGTGTTCGAAGAC
TCGGATAGTTGGTGTCGAGGATGGGAAAATCCTTTAAGGAAGGCGATGAT
TTCAGCGGTTGTCACAGAGAAAGACACGACCGGAGAACTGATTTCCTCAA
TTAACGACATGTTCACGCAGGTGAAGCAGAGGCTGGATGAGGGCTTGAGC
GGTGGCGAAGCCTTCAAGTTCCTCCTGCGGCTGGTAGCGACACACTTC back to topCoding sequence (CDS) from alignment at P-lacustris_contig102:26341..27088- >mRNA_P-lacustris_contig102.266.1 ID=mRNA_P-lacustris_contig102.266.1|Name=mRNA_P-lacustris_contig102.266.1|organism=Pleurocladia lacustris SAG_25_93|type=CDS|length=480bp|location=Sequence derived from alignment at P-lacustris_contig102:26341..27088- (Pleurocladia lacustris SAG_25_93)
TTCGGGCTCGGGGTAGGGTTCGGCGGTTGCGACGCAAGGAGCGGCCGAGG
GAGGAAGGACAGCCTTCGGAATCGGAGGGGGAGGAAGAGAAATCTTCGGC
CTCGGATGGCGGGAGTGCATCCGCGTCTGGAGAAGGAGAGGCTTCTCCAA
CATCAGAACATGTTCGGGCTCGGGGTAGGGTTCGGCGGTTGCGACGCAAG
GAGCGGCCGAGGGAGGAAGGACAGCCTTCGGAATCGGAGGGGGAGGAAGA
GAAATCTTCGGCCTCGGATGGCGGGAGTGCATCCGCGTCTGGAGAAGGAG
AGGCTTCTCCAACATCAGAACATGGTGAAGCAGAGGCTGGATGAGGGCTT
GAGCGGTGGCGAAGCCTTCAAGTTCCTCCTGCGGCTGGTAGCGACACACT
TCGTGAAGCAGAGGCTGGATGAGGGCTTGAGCGGTGGCGAAGCCTTCAAG
TTCCTCCTGCGGCTGGTAGCGACACACTTC back to top
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