mRNA_P-lacustris_contig1017.249.1 (mRNA) Pleurocladia lacustris SAG_25_93
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Overview
Homology
BLAST of mRNA_P-lacustris_contig1017.249.1 vs. uniprot
Match: D7FPU9_ECTSI (BZIP domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPU9_ECTSI) HSP 1 Score: 514 bits (1325), Expect = 1.760e-167 Identity = 387/585 (66.15%), Postives = 405/585 (69.23%), Query Frame = 1
Query: 526 MEEMIAGKLLGLAVVAANSAAADLAVTGIESEDEEEDTCSWSRDGSGDASYGDGGSEDDEEDDSVGVKPNKSSDDRRAVAADRKARNRERNRLHARKTRQRKKQHVQELQLKIWGLRQERQRLLQLSTDHRTAGVLLALSCSPKQCVQGAAVGSEDAPRLPPSLKLPSTAATAAASSSS--STRDWSQEVASHEDALRKITQEFESMDGSQQFGEEDEAGTTVIATGGKG--SSRAVKGTLSDRTALRRERNRMHAKRTRNRKKLFVEACSIMIDKMKVENAQLEHEIRASGIHLPEDNWAEEVRETIPEEPLPEYLAALWDFAEGKSHSP-KTPG---------LKPPTTATAVTPPATLGIPSGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPPSSPLAG--LMSVSSEQASKRPA---ASALAVSDTATVSTPGQALQDASALFAFMEAAQTRSAKRVRVAPPSQQE-NNSGRINNEGAKYEQTQPRGWSDHGSTTSESRGSSEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRESGADLPPAFWTSRQVLERYVLPRQQLLQG 2220
MEEMIAGKLLGLA VAANSAAADL K + DDR+AVAADRKARNRERNRLHARKTRQRKKQHVQELQLKIWGLRQERQRLLQLSTDHRTAGVLLALSCSPKQC +G A + R P+LKLP AAT AAS SS S RDW +EVASHEDALRKITQEFE MDGSQQ G+++EA T GGK SR KGTLSDRTALRRERNRMHAKRTRNRKKLFVEACS+MIDKMKVENAQLEHEIRASGI LPEDNWAEEVRETIPEEPLPEYLAALWDFAEGKSHS K PG V+PPAT +PS G XXXXXXXXXXXXXXXXXXXXXXXXXXXXX X RP S PLAG MSV SEQASK+PA A+A A S PGQAL+DASAL AFMEAAQTRS KRVRVAP Q G + E AK Q QPRGWSD GSTTSESRG S+ XXXXXX SR+SGA LPP FWTSRQVLERYVLPRQQLLQG
Sbjct: 1 MEEMIAGKLLGLAAVAANSAAADLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAGKRKMTPDDRKAVAADRKARNRERNRLHARKTRQRKKQHVQELQLKIWGLRQERQRLLQLSTDHRTAGVLLALSCSPKQCQEGPAGSQHPSSRSSPALKLPKAAATPAASRSSKGSGRDWGEEVASHEDALRKITQEFERMDGSQQAGDDEEAATHA---GGKXXXGSRGAKGTLSDRTALRRERNRMHAKRTRNRKKLFVEACSVMIDKMKVENAQLEHEIRASGIQLPEDNWAEEVRETIPEEPLPEYLAALWDFAEGKSHSTSKAPGSGVASXXXXXXXXXXXXPVSPPATPRMPSAGAFRQSRQTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPX--RPXSPPLAGSMAMSVLSEQASKQPAVAPATAAGADPVAAASNPGQALEDASALCAFMEAAQTRSVKRVRVAPQQQXXXRKDGNTSTESAKQMQAQPRGWSDQGSTTSESRGGSDLSEEDAANERKSADGSGASTLSXXXXXXSSRDSGAVLPPEFWTSRQVLERYVLPRQQLLQG 580
BLAST of mRNA_P-lacustris_contig1017.249.1 vs. uniprot
Match: A0A6H5L2A4_9PHAE (BZIP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2A4_9PHAE) HSP 1 Score: 286 bits (733), Expect = 2.890e-85 Identity = 187/276 (67.75%), Postives = 198/276 (71.74%), Query Frame = 1
Query: 523 MMEEMIAGKLLGLAVVAANSAAADLAVTGIESEDEEEDTCSWSRDGSGDASYGDGGSEDDEEDDSVGVKPNKSSDDRRAVAADRKARNRERNRLHARKTRQRKKQHVQELQLKIWGLRQERQRLLQLSTDHRTAGVLLALSCSPKQCVQGAAVGSEDAPRLPPSLKLPSTAATAAASSSS--STRDWSQEVASHEDALRKITQEFESMDGSQQFGEEDEAGTTVIATGGKGSSRAVKGTLSDRTALRRERNRMHAKRTRNRKKLFVEACSIMIDKM 1344
MMEE+IAGKLLGLA VAANSAAADLA TG+ESE K + DDR+AVAADRKARNRERNRLHARKTRQRKKQHVQELQLKIWGLRQERQRLLQLSTDH TAGVLLALSCSP+QC +G A + R P+LKLP AAT AAS SS S+RDW QEVASHEDALRKITQEFE MDGSQQ G+ SRA KGTLSDRTALRRERNRMHAKRTRNRKKLFVEACS+MIDKM
Sbjct: 1 MMEEVIAGKLLGLAAVAANSAAADLAATGVESEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAGKRKMTPDDRKAVAADRKARNRERNRLHARKTRQRKKQHVQELQLKIWGLRQERQRLLQLSTDHHTAGVLLALSCSPQQCQEGPAGNQHQSSRSSPALKLPKAAATPAASRSSKGSSRDWGQEVASHEDALRKITQEFERMDGSQQAGDXXXXXXXXXXXXXX-XSRAAKGTLSDRTALRRERNRMHAKRTRNRKKLFVEACSVMIDKM 275
BLAST of mRNA_P-lacustris_contig1017.249.1 vs. uniprot
Match: A0A6U4EHK2_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4EHK2_9STRA) HSP 1 Score: 79.0 bits (193), Expect = 1.490e-11 Identity = 81/219 (36.99%), Postives = 100/219 (45.66%), Query Frame = 1
Query: 787 RERNRLHARKTRQRKKQHVQELQLKIWGLRQERQRLLQLSTDHRTAGVLLALSCSPKQCVQGAAVGSEDAPRLPPSLKLPSTAATAAASSSSSTRDWSQEVASHED------ALRKITQEFE-SMDGSQQFGEEDEAGTTVIATGGKGSSRAVKGTLSDRTALRRERNRMHAKRTRNRKKLFVEACSIMIDKMKVENAQLEHEIRASGIHLPEDNWAEE 1422
RERNR+HARKTRQRKKQ ++ELQ +I L+ E L Q D TA VLL +S G D KL +EV E A + E + DG + DE GK T +R +RRERNRMHAKRTR+RKKLF+E +I KM+ EN Q+ +R SG+ LPE EE
Sbjct: 177 RERNRMHARKTRQRKKQQMKELQARIDKLKHEGTLLRQHIFDRYTANVLLVMS------------GKADRSETSQLSKL-------------------EEVMDREGINCLLGAASALQPRLEMTADGKLKETAPDEDKDYKPRRRGKY-------TPEERDRVRRERNRMHAKRTRDRKKLFLEESENLIFKMEEENVQMRRYLRQSGLELPEQLLREE 357
BLAST of mRNA_P-lacustris_contig1017.249.1 vs. uniprot
Match: A0A7S2REX0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2REX0_9STRA) HSP 1 Score: 77.8 bits (190), Expect = 4.460e-11 Identity = 75/214 (35.05%), Postives = 104/214 (48.60%), Query Frame = 1
Query: 751 RRAVAADRKARNRERNRLHARKTRQRKKQHVQELQLKIWGLRQERQRLLQLSTDHRTAGVLLALSCSPKQCVQGAAVGSEDAPRLPPSLKLPSTAATAAASSSSSTRDWSQEVASHEDALRKITQEFESMDGSQQFGEEDEAGTTVIATGGKGSSRAVKGTLSDRTALRRERNRMHAKRTRNRKKLFVEACSIMIDKMKVENAQLEHEIRASGI 1392
RR + +R R+RERNR+HA+KTRQRKK ++ LQ +I L+ E L Q+ + TA +LL +S GAA A L S + PST + +F S +Q G + +A K + R K T ++R +RRERNRMHAKRTR+RKKLF+E I M+ ENA+L + G+
Sbjct: 189 RRLSSEERLQRSRERNRMHAKKTRQRKKMQIEALQARIDELKTEFLGLRQIVDERYTAYILLVMS--------GAAENGSGASFLSSSAEGPST----------------------------LGSKFTSASLAQIIGRDPDAEDDKEEAPQKRTRRRGKYTPAEREHIRRERNRMHAKRTRDRKKLFLEESERKIAVMEEENAKLRDFLTRHGM 366
BLAST of mRNA_P-lacustris_contig1017.249.1 vs. uniprot
Match: A0A7S4VPU5_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4VPU5_9STRA) HSP 1 Score: 74.3 bits (181), Expect = 1.160e-10 Identity = 71/212 (33.49%), Postives = 107/212 (50.47%), Query Frame = 1
Query: 787 RERNRLHARKTRQRKKQHVQELQLKIWGLRQERQRLLQLSTDHRTAGVLLALSCSPK-----------QCVQGAAVGSEDAPRLP--PSLKLPSTAATAAASSSSSTRDWSQEVASHEDALRKITQEFESMDGSQQFGEEDEAGTTVIATGGKGSSRAVKGTLSDRTALRRERNRMHAKRTRNRKKLFVEACSIMIDKMKVENAQLEHEIRA 1383
RERNR+HARKTRQRKK+H+Q LQ + L+Q++ +L Q + TA +LL + C K ++ +A DA ++P P+L LP + +SS+ +A HE A+ + DG GK S+ L +RRERNRMHAKRTR+RK++F+E +MI +++ EN L+ + +
Sbjct: 11 RERNRMHARKTRQRKKEHMQNLQDRADELKQKQIQLKQTIHEKNTANILLGMFCKEKGESGDVDPRVEDLLKRSAEDIPDASKIPELPALILPGQHSGKKKMGTSSSAAEEMAMAQHE-AILALPVAGNPNDGID------------YELLGKDRSKCTPAELDK---IRRERNRMHAKRTRDRKRIFMEEMEVMIKQLEGENQVLQSHLNS 206
BLAST of mRNA_P-lacustris_contig1017.249.1 vs. uniprot
Match: A0A7S4W4V3_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4W4V3_9STRA) HSP 1 Score: 74.3 bits (181), Expect = 3.170e-10 Identity = 71/212 (33.49%), Postives = 107/212 (50.47%), Query Frame = 1
Query: 787 RERNRLHARKTRQRKKQHVQELQLKIWGLRQERQRLLQLSTDHRTAGVLLALSCSPK-----------QCVQGAAVGSEDAPRLP--PSLKLPSTAATAAASSSSSTRDWSQEVASHEDALRKITQEFESMDGSQQFGEEDEAGTTVIATGGKGSSRAVKGTLSDRTALRRERNRMHAKRTRNRKKLFVEACSIMIDKMKVENAQLEHEIRA 1383
RERNR+HARKTRQRKK+H+Q LQ + L+Q++ +L Q + TA +LL + C K ++ +A DA ++P P+L LP + +SS+ +A HE A+ + DG GK S+ L +RRERNRMHAKRTR+RK++F+E +MI +++ EN L+ + +
Sbjct: 11 RERNRMHARKTRQRKKEHMQNLQDRADELKQKQIQLKQTIHEKNTANILLGMFCKEKGESGDVDPRVEDLLKRSAEDIPDASKIPELPALILPGQHSGKKKMGTSSSAAEEMAMAQHE-AILALPVAGNPNDGID------------YELLGKDRSKCTPAELDK---IRRERNRMHAKRTRDRKRIFMEEMEVMIKQLEGENQVLQSHLNS 206
BLAST of mRNA_P-lacustris_contig1017.249.1 vs. uniprot
Match: A0A7S2L7Q6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2L7Q6_9STRA) HSP 1 Score: 73.2 bits (178), Expect = 3.420e-10 Identity = 74/231 (32.03%), Postives = 114/231 (49.35%), Query Frame = 1
Query: 787 RERNRLHARKTRQRKKQHVQELQLKIWGLRQERQRLLQLSTDHRTAGVLLALSCSPKQCVQGAAVGSEDAP------------------RLPPSLKLPSTAATAAASSSSSTRDWSQEVASHEDALRKITQEFESMDGSQQF---GEEDEAGTTVIATGGKGSSRAVKGTLSDRTALRRERNRMHAKRTRNRKKLFVEACSIMIDKMKVENAQLEHEIRASGIHLPEDNWA 1416
RERNR+HARKTRQRKK+H+Q+LQ + L+ E+ RL Q + TA +L+ L + + AA GS+D +P + K+P A + + S + ED + DG GE+++ V+ +GS T ++ +RRERNRMHAKRTR+RK++F+E MI +++ ENA L+ + + P++N A
Sbjct: 18 RERNRMHARKTRQRKKEHMQQLQNRADELKLEQIRLKQCINEKNTANILVGLFQTGED--SAAADGSDDTETAVSMDPQVEVLLKRPTEEIPDASKIPELPALILPGQHTKRKSSSSNDGASEDNTPTAAA-APAADGEGVTIPEGEQEDGIDYVLLGKDRGSC-----TPAELDQIRRERNRMHAKRTRDRKRIFMEEMETMIKQLEDENALLQGHMDKLNENNPDENIA 240
BLAST of mRNA_P-lacustris_contig1017.249.1 vs. uniprot
Match: A0A7S4RSS5_9STRA (Hypothetical protein (Fragment) n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4RSS5_9STRA) HSP 1 Score: 74.3 bits (181), Expect = 4.880e-10 Identity = 71/212 (33.49%), Postives = 107/212 (50.47%), Query Frame = 1
Query: 787 RERNRLHARKTRQRKKQHVQELQLKIWGLRQERQRLLQLSTDHRTAGVLLALSCSPK-----------QCVQGAAVGSEDAPRLP--PSLKLPSTAATAAASSSSSTRDWSQEVASHEDALRKITQEFESMDGSQQFGEEDEAGTTVIATGGKGSSRAVKGTLSDRTALRRERNRMHAKRTRNRKKLFVEACSIMIDKMKVENAQLEHEIRA 1383
RERNR+HARKTRQRKK+H+Q LQ + L+Q++ +L Q + TA +LL + C K ++ +A DA ++P P+L LP + +SS+ +A HE A+ + DG GK S+ L +RRERNRMHAKRTR+RK++F+E +MI +++ EN L+ + +
Sbjct: 183 RERNRMHARKTRQRKKEHMQNLQDRADELKQKQIQLKQTIHEKNTANILLGMFCKEKGESGDVDPRVEDLLKRSAEDIPDASKIPELPALILPGQHSGKKKMGTSSSAAEEMAMAQHE-AILALPVAGNPNDGID------------YELLGKDRSKCTPAELDK---IRRERNRMHAKRTRDRKRIFMEEMEVMIKQLEGENQVLQSHLNS 378
BLAST of mRNA_P-lacustris_contig1017.249.1 vs. uniprot
Match: A0A835ZF21_9STRA (BZIP domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZF21_9STRA) HSP 1 Score: 73.2 bits (178), Expect = 1.250e-9 Identity = 79/258 (30.62%), Postives = 115/258 (44.57%), Query Frame = 1
Query: 769 DRKARNRERNRLHARKTRQRKKQHVQELQLKIWGLRQERQRLLQLSTDHRTAGVLLALSCSPKQCVQGAAVGSEDAPRLPPSLKLPSTAATA-AASSSSSTRDWSQEVASHEDALRKITQEFESMDGSQQFGEEDEAGTT----VIATGGKGSSRAVKGTLSDRTALRRERNRMHAKRTRNRKKLFVEACSIMIDKMKVENAQLEHEIRASGIHLP--------------EDNWAEEVRETIPEEPLPEYLAALWDFA 1485
DR+ R+RERNRLHARKTRQRKK ++ LQ +I L++E L + + G L AL S V A + A + + A AA + + DW+ +++ H AL + +MD D A + R LRRERNRMHAKR R+RKKL V+A + ++ + NA +R + + LP +AE+ +PLPE + LW++A
Sbjct: 23 DRRKRSRERNRLHARKTRQRKKAQIESLQDRIRALKREGDLLHKQQKEQEVLGTL-ALMQSHAAAVPAAVAAAHGAQPPQDEAHMGKISELAQAAIAVWAEADWAAQLSEHCAALTALMNLCNTMDSQYMASLSDAAAAERAXXXXXXXXXXXXXXXXXXAALRAQLRRERNRMHAKRARDRKKLLVDASTAIVGVLDARNALARAHLRRAALSLPPALAATLSTAAAAPSSPYAED---DAASDPLPEDVFELWEYA 276
BLAST of mRNA_P-lacustris_contig1017.249.1 vs. uniprot
Match: A0A6U2ACZ3_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A6U2ACZ3_9STRA) HSP 1 Score: 70.1 bits (170), Expect = 9.540e-9 Identity = 66/217 (30.41%), Postives = 105/217 (48.39%), Query Frame = 1
Query: 787 RERNRLHARKTRQRKKQHVQELQLKIWGLRQERQRLLQLSTDHRTAGVLLALSCSPKQCVQGAAVG---------SEDAPRLPPSLKLPSTAATAAASSSSSTRDWSQEVASHEDALRKITQEFESMDGSQQFGEE------DEAGTTVIATGGKGSSRAVKGTLSDRTALRRERNRMHAKRTRNRKKLFVEACSIMIDKMKVENAQLEHEIRASGI 1392
RERNR+HARKTRQRKK+H+Q LQ + L+ E+ RL Q + TA +LL + G+A A +P + K+P A +S ++ + A + + ++GS + G + D+ + S K T ++ +RRERNRMHAKRTR+RK++F+E +MI +++ EN L+ + +
Sbjct: 32 RERNRMHARKTRQRKKEHMQSLQNRADELKNEQLRLKQAINEKNTASILLGMFSRDGPASGGSAKDVNPKVEELLRRSAEEIPDASKIPELPALILPGQHNSKKN--KAAAQMQPPAAAAPLDGGGLEGSPEMGPQHGGLMPDDGIDYELL-----SKDRSKCTPAELDRIRRERNRMHAKRTRDRKRIFMEEMEVMIKQLESENGLLQGHLEGLSV 241 The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig1017.249.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 19
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-lacustris_contig1017.249.1 >prot_P-lacustris_contig1017.249.1 ID=prot_P-lacustris_contig1017.249.1|Name=mRNA_P-lacustris_contig1017.249.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=567bp MMEEMIAGKLLGLAVVAANSAAADLAVTGIESEDEEEDTCSWSRDGSGDAback to top mRNA from alignment at P-lacustris_contig1017:50267..56577- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-lacustris_contig1017.249.1 ID=mRNA_P-lacustris_contig1017.249.1|Name=mRNA_P-lacustris_contig1017.249.1|organism=Pleurocladia lacustris SAG_25_93|type=mRNA|length=6311bp|location=Sequence derived from alignment at P-lacustris_contig1017:50267..56577- (Pleurocladia lacustris SAG_25_93)back to top Coding sequence (CDS) from alignment at P-lacustris_contig1017:50267..56577- >mRNA_P-lacustris_contig1017.249.1 ID=mRNA_P-lacustris_contig1017.249.1|Name=mRNA_P-lacustris_contig1017.249.1|organism=Pleurocladia lacustris SAG_25_93|type=CDS|length=3402bp|location=Sequence derived from alignment at P-lacustris_contig1017:50267..56577- (Pleurocladia lacustris SAG_25_93)back to top |