mRNA_P-lacustris_contig1014.229.1 (mRNA) Pleurocladia lacustris SAG_25_93
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_P-lacustris_contig1014.229.1 vs. uniprot
Match: D7G7Z2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7Z2_ECTSI) HSP 1 Score: 130 bits (326), Expect = 8.380e-31 Identity = 238/284 (83.80%), Postives = 247/284 (86.97%), Query Frame = 1 Query: 1 MEGVDKLLNIGGSIDVRDTAQRTLLHRACEEASAATVARXXXXXXXXXXXXXXXXXXXXXXXXXGRLDIVRLLVEKGGADTRARAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSGYEKVATLLLDHQADIGARGPKGYRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYADSRRCKERIREAHRREEKAAEAQRQLALQRKRDEAIRRREQELLDRIDLRSRARK 852
M GVDKLL IGGSIDVRDTAQRTLLHRACEEAS ATV XXXXXXXXXXXXXXXXXXXXXXXXX RL+IVRLLVEK GAD+RARAK XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX A GPKG+RXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX Y DSRRCKERIREA RREE+AAEAQRQLALQ+KRD+ RRREQELLDR+DLR+RAR+
Sbjct: 229 MSGVDKLLEIGGSIDVRDTAQRTLLHRACEEASIATVXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLEIVRLLVEKAGADSRARAKVMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAIGPKGHRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDALHYTDSRRCKERIREAQRREERAAEAQRQLALQKKRDDENRRREQELLDRVDLRARARR 512 The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig1014.229.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 1 ZOOMx 1POSITION0
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-lacustris_contig1014.229.1 >prot_P-lacustris_contig1014.229.1 ID=prot_P-lacustris_contig1014.229.1|Name=mRNA_P-lacustris_contig1014.229.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=285bp MEGVDKLLNIGGSIDVRDTAQRTLLHRACEEASAATVARLLELGATVNATback to top mRNA from alignment at P-lacustris_contig1014:42031..44567- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-lacustris_contig1014.229.1 ID=mRNA_P-lacustris_contig1014.229.1|Name=mRNA_P-lacustris_contig1014.229.1|organism=Pleurocladia lacustris SAG_25_93|type=mRNA|length=2537bp|location=Sequence derived from alignment at P-lacustris_contig1014:42031..44567- (Pleurocladia lacustris SAG_25_93)back to top Coding sequence (CDS) from alignment at P-lacustris_contig1014:42031..44567- >mRNA_P-lacustris_contig1014.229.1 ID=mRNA_P-lacustris_contig1014.229.1|Name=mRNA_P-lacustris_contig1014.229.1|organism=Pleurocladia lacustris SAG_25_93|type=CDS|length=1710bp|location=Sequence derived from alignment at P-lacustris_contig1014:42031..44567- (Pleurocladia lacustris SAG_25_93)back to top |