mRNA_P-lacustris_contig1013.224.1 (mRNA) Pleurocladia lacustris SAG_25_93
You are viewing an mRNA, more information available on the corresponding polypeptide page
|
Overview
Homology
BLAST of mRNA_P-lacustris_contig1013.224.1 vs. uniprot
Match: D8LFN4_ECTSI (Pleiotropic drug resistance transporter n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFN4_ECTSI) HSP 1 Score: 724 bits (1870), Expect = 4.090e-247 Identity = 360/457 (78.77%), Postives = 392/457 (85.78%), Query Frame = 1 Query: 1 ELTTVGTLDEAPWPDVYQKRYPKSWWYHQKVCFTKKLMLMLRDKAYIKSQVMSALIMGLIVGSIFYDLDLEDANAKFGLIFFALQFLSTAGMAQIPSAIERRGVFYKQSQAGFYPISCEVVSDTVVNSGLTVIASIVFSPVIYFLVGFSTSDYGARFFVFMAIVIATNLAMTQYFRFLASFMPDFT---GFGGLSVLMCTLFCGYFIPGDDIPPWWIWVFYVNPLTWAFRAAVLNEFQSPEYEDACG---VQIGDVCQKSLGQTYIDAYGFEDDKAYIWGGVAFIVGQFLLCATATGLAYNYIRWDVSDSAPIPRSTTTDEGGSENQAKVSIEQFNAPVPVLKRQASQLATDLPFEPVNMTFSDVSYSVPHPSGDGNLELLSGIYGFSKPGEMTALMGSSGAGKTTLLDVLAGRKTGGTITGDIRLNGHPKLQKTFTRVAGYVEQQDMHSAVVTVKE 1353
EL T G+LDEAPWP +YQ+RYPKSWWYHQK+CF KK MLMLRDK Y+KSQ+MSAL+MGLIVGSIFYDL L DANAKFGLIFF+L FLS +GMAQIP AIERRGVFYKQSQAGFYP SCEVV+DT+VN+ LTV+ASI+F+PV+YFLVGFSTSD GARFF FM IVI TN+ +TQYFRFLA+FMP+FT GF GLSVL+C LFCGY IPG D+P WWIW F+VNPLTWAFRAAVLNEFQSPEYED CG + G C SLGQ YIDAYGFEDDK YIWGG+AFI +FLLCA ATG+AY +I+WD SDS PI T DE G+ +S+EQFNAPV LKRQASQL DLPFEPV MTFSDVSYSVPHPSGDGNLELLSGI GF KPGEMTALMGSSGAGKTTLLDVLAGRKTGGTITGDIRLNGHPK QKTFTRVAGYVEQQDMHS VVTVKE
Sbjct: 488 ELRTAGSLDEAPWPALYQRRYPKSWWYHQKLCFEKKSMLMLRDKPYMKSQIMSALVMGLIVGSIFYDLGLSDANAKFGLIFFSLLFLSMSGMAQIPGAIERRGVFYKQSQAGFYPTSCEVVADTLVNTILTVVASIIFAPVVYFLVGFSTSDNGARFFTFMVIVIVTNVNVTQYFRFLAAFMPNFTLAQGFAGLSVLVCVLFCGYLIPGADVPAWWIWAFHVNPLTWAFRAAVLNEFQSPEYEDTCGAPDLAEGAACPVSLGQVYIDAYGFEDDKVYIWGGIAFIFVEFLLCAAATGMAYQFIQWDSSDSVPIAPGTAADEDGAGGPENMSVEQFNAPVGKLKRQASQLEADLPFEPVTMTFSDVSYSVPHPSGDGNLELLSGISGFCKPGEMTALMGSSGAGKTTLLDVLAGRKTGGTITGDIRLNGHPKQQKTFTRVAGYVEQQDMHSTVVTVKE 944
BLAST of mRNA_P-lacustris_contig1013.224.1 vs. uniprot
Match: D8LFP2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFP2_ECTSI) HSP 1 Score: 720 bits (1859), Expect = 1.390e-246 Identity = 360/457 (78.77%), Postives = 394/457 (86.21%), Query Frame = 1 Query: 1 ELTTVGTLDEAPWPDVYQKRYPKSWWYHQKVCFTKKLMLMLRDKAYIKSQVMSALIMGLIVGSIFYDLDLEDANAKFGLIFFALQFLSTAGMAQIPSAIERRGVFYKQSQAGFYPISCEVVSDTVVNSGLTVIASIVFSPVIYFLVGFSTSDYGARFFVFMAIVIATNLAMTQYFRFLASFMPDFT---GFGGLSVLMCTLFCGYFIPGDDIPPWWIWVFYVNPLTWAFRAAVLNEFQSPEYEDACGVQ---IGDVCQKSLGQTYIDAYGFEDDKAYIWGGVAFIVGQFLLCATATGLAYNYIRWDVSDSAPIPRSTTTDEGGSENQAKVSIEQFNAPVPVLKRQASQLATDLPFEPVNMTFSDVSYSVPHPSGDGNLELLSGIYGFSKPGEMTALMGSSGAGKTTLLDVLAGRKTGGTITGDIRLNGHPKLQKTFTRVAGYVEQQDMHSAVVTVKE 1353
EL T G+LDEA WP V+++RYPKSWWYHQK+CFTKK MLMLRDKA+IKSQV SAL MGLIVGSIFYDLDL+DANAKFGLIFFAL +L+ GMAQIP AIERRGVFYKQ+QAGFYP SCEVVSDT+VN+ LTV+ S+VF+PV+YFLVGFSTSD GARFF FM IV ATN+ +TQYFRFLA+F P+FT GF GLSVL+C LFCGY IPGDD+P WWIW F+VNPLTWAFRAAVLNEFQSPEYED CGV+ G+ C SLGQ IDAYGFEDD+ YIWGGVAFI+G+FLLCATATGLA+ +I WD SDSAPI ST T + + S+EQFNAPV LKRQASQL LPFEPV MTFSDVSYSVPHPSGDGNLELLSGI GF KPGEMTALMGSSGAGKTTLLDVLAGRKTGGTITGDIRLNGHPK QKTFTRV+GYVEQQDMHSAVVTVKE
Sbjct: 400 ELRTAGSLDEAAWPAVHRQRYPKSWWYHQKLCFTKKSMLMLRDKAFIKSQVFSALFMGLIVGSIFYDLDLDDANAKFGLIFFALLYLALEGMAQIPGAIERRGVFYKQNQAGFYPASCEVVSDTLVNTALTVLCSLVFAPVVYFLVGFSTSDNGARFFTFMVIVTATNVNVTQYFRFLAAFFPNFTLAQGFSGLSVLVCVLFCGYLIPGDDVPAWWIWAFHVNPLTWAFRAAVLNEFQSPEYEDTCGVEGLAEGETCPASLGQVVIDAYGFEDDEGYIWGGVAFILGEFLLCATATGLAFRFIHWDSSDSAPIAPSTDTYKDAEADADNPSVEQFNAPVAKLKRQASQLERGLPFEPVTMTFSDVSYSVPHPSGDGNLELLSGISGFCKPGEMTALMGSSGAGKTTLLDVLAGRKTGGTITGDIRLNGHPKQQKTFTRVSGYVEQQDMHSAVVTVKE 856
BLAST of mRNA_P-lacustris_contig1013.224.1 vs. uniprot
Match: A0A835Z0F1_9STRA (ABC-2 type transporter-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0F1_9STRA) HSP 1 Score: 380 bits (975), Expect = 4.410e-116 Identity = 201/408 (49.26%), Postives = 264/408 (64.71%), Query Frame = 1 Query: 178 IVGSIFYDLDLEDANAKFGLIFFALQFLSTAGMAQIPSAIERRGVFYKQSQAGFYPISCEVVSDTVVNSGLTVIASIVFSPVIYFLVGFSTSDYGARFFVFMAIVIATNLAMTQYFRFLASFMPDFT---GFGGLSVLMCTLFCGYFIPGDDIPPWWIWVFYVNPLTWAFRAAVLNEFQSPEYEDACGVQI--GDVCQKSLGQTYIDAYGFEDDKAYIWGGVAFIVGQFLLCATATGLAYNYIRWDVSDSAPIPRSTTTDEGGSE-----------NQAKVSIEQFNAPVPVLKRQASQLATDLPFEPVNMTFSDVSYSVPHPSGDGNLELLSGIYGFSKPGEMTALMGSSGAGKTTLLDVLAGRKTGGTITGDIRLNGHPKLQKTFTRVAGYVEQQDMHSAVVTVKE 1353
+ GSIF+DL L+ ++KFGL+FF+L FL G+AQIP AIE R VFYKQ GFYP C+VV+ +S L + ++VFSPVIYF+ G + SD G RFF+++ I + NL M YFR LA+ MP T LS++ LFCGY +P D P +IW+F+ NP+TWAFR+ VLNEF +P+Y++ C + G+ C SL +D++GF D AYIW G ++ G + L AT L + IRWD SD+AP+ + S+ + A + ++ A + LK + A F PV + F DV YSVPHPSG+G+LELL + G +KPG MTALMGSSGAGKTTLLDVLA RK+GG ITG + LNGHPK +K+FTRVAGYVEQ D+HS VVTV+E
Sbjct: 471 LAGSIFFDLPLDATSSKFGLLFFSLLFLGLKGIAQIPVAIENRHVFYKQQSQGFYPTLCDVVAQEATHSTLIIAETLVFSPVIYFMTGLA-SDAG-RFFIYLVIALGFNLNMAAYFRALAAIMPSLTVASASATLSLVFIILFCGYLVPEPDTPDVFIWIFWCNPMTWAFRSLVLNEFLAPKYKETCATDVAPGEACPASLSSAVLDSFGFRTDTAYIWAGFVYVAGLWFLTTCATALVLDKIRWDTSDAAPLLEDEQLEASDSDADESRWARRYTSDAIYTRQEVEASMARLKSDGTAAAAGA-FTPVTLAFKDVRYSVPHPSGEGSLELLKNVSGHAKPGTMTALMGSSGAGKTTLLDVLASRKSGGDITGLVTLNGHPKDKKSFTRVAGYVEQNDVHSPVVTVRE 875
BLAST of mRNA_P-lacustris_contig1013.224.1 vs. uniprot
Match: A0A835ZIR5_9STRA (ABC-2 type transporter-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZIR5_9STRA) HSP 1 Score: 374 bits (960), Expect = 2.390e-114 Identity = 204/459 (44.44%), Postives = 283/459 (61.66%), Query Frame = 1 Query: 1 ELTTVGTLDEAPWPDVYQKRYPKSWWYHQKVCFTKKLMLMLRDKAYIKSQVMSALIMGLIVGSIFYDLDLEDANAKFGLIFFALQFLSTAGMAQIPSAIERRGVFYKQSQAGFYPISCEVVSDTVVNSGLTVIASIVFSPVIYFLVGFSTSDYGARFFVFMAIVIATNLAMTQYFRFLASFMPDFT---GFGGLSVLMCTLFCGYFIPGDDIPPWWIWVFYVNPLTWAFRAAVLNEFQSPEYEDACGVQI--GDVCQKSLGQTYIDAYGFEDDKAYIWGGVAFIVGQFLLCATATGLAYNYIRWDVSDSAPIPRSTTTDEGGSENQAKVSIEQFNAPVPVLKRQASQLATDLPFEPVNMTFSDVSYSV---PHPSGDGNLELLSGIYGFSKPGEMTALMGSSGAGKTTLLDVLAGRKTGGTITGDIRLNGHPKLQKTFTRVAGYVEQQDMHSAVVTVKE 1353
EL T D W K Y +W YH KVC K L RD AYI++Q+++A +M L++GSIF+DL + N+KFG++FF+L FLS GMAQ+P AIE R VFYKQ Q GFYP S +V + V + + + +F+P++YF+V + FFVF A+++ NL M YFR +A+ MP+F+ F G++++ LFCG+ +P DI P +IW++++NP++WAFR VLNEF SP Y+D C V++ G C SL + +YGF+ + A+I GG+ F++G ++L + + Y+ WD SDSAPI + ++ +E+ P + + S + S PHPSGDG LELL+ I G++KPG +TALMGSSGAGKTTLLDVLAGRKTGG ITG LNGHPK +K F R+A YVEQ D+HS VVTV+E
Sbjct: 378 ELETPPNKDHQ-WRPNQAKLYAGTWLYHFKVCAGKHFSLFQRDTAYIRTQLLTAAMMSLVMGSIFFDLPADAINSKFGMMFFSLLFLSLNGMAQVPVAIENRHVFYKQHQQGFYPASADVAAQVCVQALQGIGETTLFAPILYFMVHLERT--AQNFFVFYAMILVLNLNMAAYFRLVAAIMPNFSIAQSFAGVTLVFIVLFCGFLVPEPDIVPVFIWIYWINPISWAFRTLVLNEFLSPFYKDTCSVEVPAGTTCPLSLSDAVLGSYGFKTESAWIVGGIIFVLGLWVLTVASIAITLTYLCWDASDSAPIV------------EEELQLEEAG--------------------PADSSHSMAAVSAAARPHPSGDGMLELLNDITGYAKPGTLTALMGSSGAGKTTLLDVLAGRKTGGEITGAFTLNGHPKEKKAFARIAAYVEQVDVHSPVVTVRE 801
BLAST of mRNA_P-lacustris_contig1013.224.1 vs. uniprot
Match: D7FQM9_ECTSI (ABC transporter domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQM9_ECTSI) HSP 1 Score: 333 bits (853), Expect = 1.270e-103 Identity = 175/358 (48.88%), Postives = 221/358 (61.73%), Query Frame = 1 Query: 4 LTTVGTLDEAPWPDVYQKRYPKSWWYHQKVCFTKKLMLMLRDKAYIKSQVMSALIMGLIVGSIFYDLDLEDANAKFGLIFFALQFLSTAGMAQIPSAIERRGVFYKQSQAGFYPISCEVVSDTVVNSGLTVIASIVFSPVIYFLVGFSTSDYGARFFVFMAIVIATNLAMTQYFRFLASFMPDFTGFGGLSVLMCTLFCGYFIPGDDIPPWWIWVFYVNPLTWAFRAAVLNEFQSPEYEDACGVQIGDV--CQKSLGQTYIDAYGFEDDKAYIWGGVAFIVGQFLLCATATGLAYNYIRWDVSDSAPIPRSTTTDEGGSENQAKVSIEQFNAPVPVLKRQASQLATDLPFEPVNMTFS 1071
+ T G D + WP VY+ YP S+ YHQKVCF + MLML+DK IK+Q+MS ++G +VGSIF+ LDL+DANAKFGLIFF+L +LST GM QI AI +RG+FYKQ AGFYP SC V+++T VN+ LT G GLS+L+C LFCG+ IP D+IP WWIW+F+ NPLTWAFRAAVLNEFQ+PEYE V +GD C LG+T I AYGF D Y+WGG+AF+V +FLLC T LAY+YI +D SDSAPI + T ++ ++ + + FNAPV +KRQ SQL DLPF+PV +TFS
Sbjct: 403 VDTPGENDSSEWPTVYKSEYPGSFLYHQKVCFKRAAMLMLKDKGNIKTQLMSGPLIGAVVGSIFFQLDLDDANAKFGLIFFSLLYLSTNGMNQITPAIMQRGIFYKQKAAGFYPTSCVVIAETTVNTSLT-------------------------------------------------------GVSGLSLLLCVLFCGFLIPADNIPGWWIWLFHANPLTWAFRAAVLNEFQTPEYE----VCVGDAESCDLGLGETLIKAYGFARDPLYVWGGIAFLVVEFLLCVMVTSLAYHYIHFDSSDSAPIVPTATGEDQETDRLSAEDAKAFNAPVAQMKRQNSQLLADLPFDPVTLTFS 701
BLAST of mRNA_P-lacustris_contig1013.224.1 vs. uniprot
Match: W7TP47_9STRA (Atp-binding cassette superfamily n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TP47_9STRA) HSP 1 Score: 278 bits (711), Expect = 3.870e-79 Identity = 169/502 (33.67%), Postives = 261/502 (51.99%), Query Frame = 1 Query: 31 APWPDVYQKRYPKSWWYHQKVCFTKKLMLMLRDKAYIKSQVMSALIMGLIVGSIFYDLDLEDANAKFGLIFFALQFLSTAGMAQIPSAIERRGVFYKQSQAGFYPISCEVVSDTVVNSGLTVIASIVFSPVIYFLVGFSTSDYGARFFVFMAIVIATNLAMTQYFRFLASFMPDFTG---FGGLSVLMCTLFCGYFIPGDDIPPWWIWVFYVNPLTWAFRAAVLNEFQSPEYED------------ACGVQIGDVCQK-----------SLGQTYIDAYGFEDDKAYIWGGVAFIVGQFLLCATATGLAYNYIRWDVSDSAPIPRSTTTDE------------------GGSENQAKVSIEQFNA-------PVPVL------KRQASQLATDLPFEPVNMTFSDVSYSV--PHPSGDGN--LELLSGIYGFSKPGEMTALMGSSGAGKTTLLDVLAGRKTGGTITGDIRLNGHPKLQKTFTRVAGYVEQQDMHSAVVTVKE 1353
APW + + W+ +C ++ + LRD+ +++ ++M L+MG + G++FY LD D + K ++FF+L F++ +A IP+ +E+R VFYKQ AGF+P S VV+ +V + + ++VF+ + YFL S +DYGA + ++ + +T L + Q FR + +P L VL+ +F G I G+DIP +W W++++NPL W RA +NEF SP Y C + + + S G+ Y+ GF+ + +I GV F++ + + T LA IRW +AP+P + +E G + + + F+ P L +R L F+P+ + F + YSV P P G G +EL+ G+ G+++PG +TALMGSSGAGKTTLLDVLAGRKT G I G+I +NG PK Q+ F+RV GYVEQ D+HS TV+E
Sbjct: 568 APWLRRQRCEFSNGWFRSTWLCLQRQARITLRDRVFLRGRIMQVLLMGAMAGTLFYQLDAHDWSDKVCMLFFSLMFITLGNLATIPTVMEQRAVFYKQRDAGFFPTSSAVVAQMLVQIPIQFVETMVFTSLAYFLSALSRADYGAFYLTYVLVAFSTALGIGQIFRLVVHLVPSLAQAQPICSLFVLLFVVFSGLTIKGEDIPFYWTWLYWINPLAWGLRALAVNEFSSPTYSQHIIYPPPVPRAIPCDPRRPEALLQYTGSNGPFQCLSEGEIYLINLGFKTKRDWIVYGVLFLLALWSVMLMLTMLAMRLIRWTGQGAAPVPSAAKREELAATEDENPGYKEKDLNEGPAVGASGAGYDAFSYELLSDADPEKALGHQSMGRRPKHPTGDSLTFQPITLVFKHIWYSVELPKPQGGGKERVELVKGVTGYARPGSLTALMGSSGAGKTTLLDVLAGRKTTGCIIGEILVNGFPKEQRAFSRVMGYVEQTDVHSPHSTVRE 1069
BLAST of mRNA_P-lacustris_contig1013.224.1 vs. uniprot
Match: A0A6H5K7U8_9PHAE (ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7U8_9PHAE) HSP 1 Score: 256 bits (655), Expect = 1.790e-74 Identity = 130/160 (81.25%), Postives = 138/160 (86.25%), Query Frame = 1 Query: 874 LAYNYIRWDVSDSAPIPRSTTTDEGGSENQAKVSIEQFNAPVPVLKRQASQLATDLPFEPVNMTFSDVSYSVPHPSGDGNLELLSGIYGFSKPGEMTALMGSSGAGKTTLLDVLAGRKTGGTITGDIRLNGHPKLQKTFTRVAGYVEQQDMHSAVVTVKE 1353
+AY +I+WD SDSAPI T DE G+ +S+EQFNAPV LKRQASQL DLPFEPV MTFS+VSYSVPHPSGDGNLELLSGI GF KPGEMTALMGSSGAGKTTLLDVLAGRKTGGTITGDIRLNGHPK QKTFTRVAGYVEQQDMHS VVTVK+
Sbjct: 1 MAYQFIQWDSSDSAPIAPGTVADEDGAGGPENMSVEQFNAPVAKLKRQASQLEADLPFEPVTMTFSEVSYSVPHPSGDGNLELLSGISGFCKPGEMTALMGSSGAGKTTLLDVLAGRKTGGTITGDIRLNGHPKQQKTFTRVAGYVEQQDMHSTVVTVKK 160
BLAST of mRNA_P-lacustris_contig1013.224.1 vs. uniprot
Match: H3GSA1_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GSA1_PHYRM) HSP 1 Score: 263 bits (671), Expect = 6.720e-74 Identity = 161/464 (34.70%), Postives = 254/464 (54.74%), Query Frame = 1 Query: 4 LTTVGT-LDEAPWPDVYQKRYPKSWWYHQKVCFTKKLMLMLRDKAYIKSQVMSALIMGLIVGSIFYDLDLEDANAKFGLIFFALQFLSTAGMAQIPSAIERRGVFYKQSQAGFYPISCEVVSDTVVNSGLTVIASIVFSPVIYFLVGFSTSDYGARFFVFMAIVIATNLAMTQYFRFLASFMPDF---TGFGGLSVLMCTLFCGYFIPGDDIPPWWIWVFYVNPLTWAFRAAVLNEFQSPEYEDACGVQIGDVCQ---KSLGQTYIDAYGFEDDKAYIWGGVAFIVGQFLLCATATGLAYNYIRWDVSDSAPIPRSTTTDEGGSENQAKVSIEQ-FNAPVPVLKRQASQLATDLP-----FEPVNMTFSDVSYSVPHPSGDG-NLELLSGIYGFSKPGEMTALMGSSGAGKTTLLDVLAGRKTGGTITGDIRLNGHPKLQKTFTRVAGYVEQQDMHSAVVTVKE 1353
LT VGT +D P + +S+W ++ ++ M+ +R++A+I+ + + + MGLI S F+ +D D G++F A+ FL+ ++Q+P+ + R VFYKQ A F+P S V++ +V L + SIVF ++Y++ GF T+ GA F ++ +++ TNL +F L + PDF S+ LF G+ + +P W+IWV+++NP+ W RA +N+++S E+ D C D C K++G+ Y++ Y K ++W G+ F++ +++ L Y R++ + + + DE A ++ NA + +A D+ F PV + F D+ YSVPHPS +L+LL GI GF+KPG MTALMGSSGAGKTTL+DV+AGRKTGGTI G I NG+ R GY EQ D+HS T++E
Sbjct: 410 LTDVGTHMDTMP-------EFRRSFWESTRILMKRQTMVTMRNRAFIRGRTIMVIAMGLIYSSTFWQVDPTDVQVTLGIMFQAILFLALGQVSQVPTFMASRDVFYKQRGANFFPTSAYVLACSVAQVPLALAESIVFGTMVYWMCGF-TATAGA-FICYLILLVLTNLVFAAWFFLLTAVSPDFHIAKPGSTFSIAFFILFAGFVMTKSTMPGWFIWVYWINPIAWCLRALAVNQYRSAEF-DVCVYDGRDYCAQFTKNMGEYYLEQYDVPSSKMWVWLGILFMLLCYVVFMCLGCLVLEYKRYESPEHTIVKKE---DEDVEVETAYALVKTPRNAAYETMPTAREAVALDVDTREKNFTPVIIAFQDLWYSVPHPSNPKESLDLLRGISGFAKPGTMTALMGSSGAGKTTLMDVIAGRKTGGTIKGKILFNGYEATDLAIRRCTGYCEQMDIHSDATTIRE 860
BLAST of mRNA_P-lacustris_contig1013.224.1 vs. uniprot
Match: K3WZL7_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WZL7_GLOUD) HSP 1 Score: 261 bits (667), Expect = 2.320e-73 Identity = 158/453 (34.88%), Postives = 251/453 (55.41%), Query Frame = 1 Query: 34 PWPDVYQKRYPKSWWYHQKVCFTKKLMLMLRDKAYIKSQVMSALIMGLIVGSIFYDLDLEDANAKFGLIFFALQFLSTAGMAQIPSAIERRGVFYKQSQAGFYPISCEVVSDTVVNSGLTVIASIVFSPVIYFLVGFSTSDYGARFFVFMAIVIATNLAMTQYFRFLASFMPDF---TGFGGLSVLMCTLFCGYFIPGDDIPPWWIWVFYVNPLTWAFRAAVLNEFQSPEYEDACGVQIGDVCQ---KSLGQTYIDAYGFEDDKAYIWGGVAFIVGQFLLCATATGLAYNYIRWDVSDSAPIPRSTTTDEGGSENQAKVSIEQFNAPVPVLKRQASQLATDLP-----FEPVNMTFSDVSYSVPHPSGDGN--LELLSGIYGFSKPGEMTALMGSSGAGKTTLLDVLAGRKTGGTITGDIRLNGHPKLQKTFTRVAGYVEQQDMHSAVVTVKE 1353
P P+ +Q S+W + V ++LM+ LR+ A+IK + + ++MGLI S+FY + +A G +F A+ FLS +QIP+ I R +FYKQ A FY S V++ +V L + S+VF ++Y++ GF + +FV++ I+I TNLA F FLA+ PD ++VL LF G+ I +P +++W++++NP+ W RA +N+++SP + D C + C+ K +GQ + + D KA+IW G+ F++ ++ L Y R++ + + +T D +E+ +S + + P K + ++ ++ F PV + F D+ Y+VP PS + ++LL GI G++ PG MTALMGSSGAGKTTL+DV+AGRKT GTI G I LNG+ R GY EQ D+HS T++E
Sbjct: 419 PMPEFHQ-----SFWGNTAVLMRRQLMVTLRNTAFIKGRAIMVIVMGLIYSSVFYQFNPTNAQVVIGTMFQAVLFLSLGQASQIPTFIFARDIFYKQRAANFYRTSSYVLACSVSQLPLALAESLVFGSLVYWMCGFVAT--AKAYFVYLIILILTNLAFAACFFFLAAIAPDLHIAKPISMIAVLFFVLFAGFVIAKSQMPDYFVWIYWINPIAWCLRAIAVNQYRSPTF-DKCEYDGINYCERFGKHMGQYQLGLFDVPDSKAWIWYGMVFMIASYVFFMFLGYLVLEYKRYESPEHVSLKHATADD---NESYQILSTPKSSGTSPDEKDSSEEVIVNVETRKQNFTPVTLAFKDLWYTVPLPSNPKHETIDLLKGITGYALPGTMTALMGSSGAGKTTLMDVIAGRKTAGTIQGQILLNGYEATDLAIRRSTGYCEQMDIHSEASTIRE 860
BLAST of mRNA_P-lacustris_contig1013.224.1 vs. uniprot
Match: F0Y2I6_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y2I6_AURAN) HSP 1 Score: 261 bits (666), Expect = 2.590e-73 Identity = 161/424 (37.97%), Postives = 242/424 (57.08%), Query Frame = 1 Query: 127 DKAYIKSQVMSALIMGLIVGSIFYDLDLEDANAKFGLIFFALQFLSTAGMAQIPSAIERRGVFYKQSQAGFYPISCEVVSDTVVNSGLTVIASIVFSPVIYFLVGFSTSDYGARFFVFMAIVIATNLAMTQYFRFLASFMPDFTGF---GGLSVLMCTLFCGYFIPGDDIPPWWIWVFYVNPLTWAFRAAVLNEFQSPEYEDACG---VQIGDVCQKSLGQTYIDAYGFEDDKAYIWGGVAFIVGQFLLCATATGLAYNYIRWDVSDSAPIPRSTTTDEGGSENQAKVSIEQFNAPVPVLKRQASQLATDLPFEPVNMTFSDVSYSVPHPSGDGN-----LELLSGIYGFSKPGEMTALMGS----SGAGKTTLLDVLAGRKTGGTITGDIRLNGHPKLQKTFTRVAGYVEQQDMHSAVVTVKE 1353
D A S+V+S I+G G++F + +D K+GL F A+ + GM+ I I+RR FYKQ A F+P +++ V+ + ++ ++V++ +Y+ VGF+ S + A F +V +L+M Q F A+ MP GL+V++C LF G+ I D+IP +W++ ++ +P+ W RA ++NEF+S Y+ + V++G + + G ++ + F+ ++A++ GV + G FL+ A A+ +A + IR SA P S D+ + N + V E +A +A+ LPFEP ++F DV Y VP P LELL G+ F KPG+MTALMGS +GAGKTTLLDVLAGRKTGG ITG+I LNG PK QK + RV+GYVEQ D+HS TV E
Sbjct: 389 DPAMYVSKVVSTTIVGFATGTVFRGVAYDDFATKYGLAFSAVVTIGLGGMSSIAGLIDRRATFYKQRDAFFFPTLAYNLAEICVDLPIVLLEALVYANAVYWFVGFTASAFPA----FFLVVFLVSLSMRQLFATFAAVMPSAAAAQPAAGLTVVLCVLFSGFVIARDNIPVYWLFFYWFSPVAWGLRAVLVNEFRSSTYDKSTPDVLVKLGCDPEDTDGVCFLSQFDFQHNRAWVTLGVGVLAGYFLVFAVASTVALDTIR---HGSAGAPSSGDDDDTRARNSSTVVPETVDA-----------VASSLPFEPATLSFHDVHYFVPVPKSSDRAAPDRLELLDGVSAFCKPGDMTALMGSFDFHTGAGKTTLLDVLAGRKTGGWITGNISLNGRPKDQKLWVRVSGYVEQLDVHSPGATVAE 794 The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig1013.224.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-lacustris_contig1013.224.1 >prot_P-lacustris_contig1013.224.1 ID=prot_P-lacustris_contig1013.224.1|Name=mRNA_P-lacustris_contig1013.224.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=459bp ELTTVGTLDEAPWPDVYQKRYPKSWWYHQKVCFTKKLMLMLRDKAYIKSQback to top mRNA from alignment at P-lacustris_contig1013:65598..75879+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-lacustris_contig1013.224.1 ID=mRNA_P-lacustris_contig1013.224.1|Name=mRNA_P-lacustris_contig1013.224.1|organism=Pleurocladia lacustris SAG_25_93|type=mRNA|length=10282bp|location=Sequence derived from alignment at P-lacustris_contig1013:65598..75879+ (Pleurocladia lacustris SAG_25_93)back to top Coding sequence (CDS) from alignment at P-lacustris_contig1013:65598..75879+ >mRNA_P-lacustris_contig1013.224.1 ID=mRNA_P-lacustris_contig1013.224.1|Name=mRNA_P-lacustris_contig1013.224.1|organism=Pleurocladia lacustris SAG_25_93|type=CDS|length=2754bp|location=Sequence derived from alignment at P-lacustris_contig1013:65598..75879+ (Pleurocladia lacustris SAG_25_93)back to top |