mRNA_P-lacustris_contig1013.223.1 (mRNA) Pleurocladia lacustris SAG_25_93
You are viewing an mRNA, more information available on the corresponding polypeptide page
|
Overview
Homology
BLAST of mRNA_P-lacustris_contig1013.223.1 vs. uniprot
Match: D7G1B0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1B0_ECTSI) HSP 1 Score: 864 bits (2232), Expect = 1.110e-297 Identity = 455/637 (71.43%), Postives = 507/637 (79.59%), Query Frame = 1 Query: 520 MGSLSNEYLDLPIIDVGGTAARAESRNETLGGYVLQAQPVIVAQMQAMVRLILDMKLARDALDGRAETTERVWLVHTSDTFGTIATSAFNSALN-ISVPLPVTSSDVTEVDDDGNEEVVMATVEVAGTVVIAASSEAVYDSELALLVESEASIVVLLAEGFDGSIVRTFLSQANDAGLTEGVQWYLPNVAAFDHIFDVNSTYRDASLAFDMQGMLGVRSCTPRTGAGSAMAEALSQEWVRLDPNEYPGAGPDGVTADGQIDPFLAFAYDSVFLAAAAAQTAQETINLRD--GGNLTGIALDRCPFPTNGSWADGVVMRDSVLSASTTLVGVTGPLVMSVGEDDDGRDVDTATFCAVNLRPHATQGGRFEVISTLDGGTLESDDGEGFQAISPFQETQTFPAGALKYPTDRPILQGRHLDVVMKRDAPPFVFVDGEGTTNDEYTGITSDFLKKLSEVVGFTYTLSAPADGTATSETIEMVRNGTVNMAASWITITSERAEYVSFTYPYFDLGISFVYKPEYAEGGNLWKAFAPFESTLWLTIFVALLVTVFLLWLFEGAKNDQFSRGGWGRRHRTIARGLSRSVYVTSSLMMSQLTHKPETLEGYLLTLGWLFTSFVLAASYTAELASYLTASKLETT 2421
MGSLSNEYLDLP++ V GTAARAESRNET GGY+L QP +V QMQ +VRLILDMKLARDA+DGR+ETTERVWLVHTSDTFGTIAT+AFN+A ISV LP TS TVEVAGTVVIAASSE ++DSELA LV++EASI+VLLAEGFDG+I+RT LSQAN+AGLTEGVQWYLPNVAAFDH+FD NSTYRDASLAFDM+G LGVR+CTPRTG + AQ+T+ L + G L GIALD CPFP NGSWADG +MRDS+LSAS TLVG TGPL MSVGEDDDGRD DT TFCAVNL+P AT G RFEVISTLDG TLES+DGEGFQAISPFQE QTFPAGAL YP DRPILQGRH+DVVM+RDAPPFVFVDG+G++ D++TGIT +FLK+L++VVGFTY+L AP +GT T ETIEMVRNG+ +M SWITITSERAEYVSFTYPYFDLGI+FVY P EG N WKAFAPFE++LWL + V+L+VTVFLLWLFEGAKN QFSRGGWGRRHRT+ RG+SRSVYVTSSLMMSQLTHKPETLEGYLLTLGWLFTSFVLAASYTAELAS+LTASKLETT
Sbjct: 1 MGSLSNEYLDLPLMSVAGTAARAESRNETEGGYLLHTQPGVVPQMQVLVRLILDMKLARDAVDGRSETTERVWLVHTSDTFGTIATAAFNAAATTISVALPDTSDXXXXXXXXXXXXXXXXTVEVAGTVVIAASSETMFDSELATLVDNEASIIVLLAEGFDGAIIRTVLSQANEAGLTEGVQWYLPNVAAFDHVFDRNSTYRDASLAFDMRGALGVRACTPRTG-----------------------------------------------------KMAQDTLTLANVNGSGLQGIALDSCPFPRNGSWADGALMRDSLLSASGTLVGATGPLGMSVGEDDDGRDADTVTFCAVNLKPDATHGARFEVISTLDGATLESEDGEGFQAISPFQEAQTFPAGALTYPPDRPILQGRHMDVVMRRDAPPFVFVDGDGSSIDDFTGITPEFLKQLADVVGFTYSLRAPPEGTTTPETIEMVRNGSADMTGSWITITSERAEYVSFTYPYFDLGIAFVYLPTIDEGVNFWKAFAPFEASLWLMLLVSLVVTVFLLWLFEGAKNAQFSRGGWGRRHRTVTRGISRSVYVTSSLMMSQLTHKPETLEGYLLTLGWLFTSFVLAASYTAELASFLTASKLETT 584
BLAST of mRNA_P-lacustris_contig1013.223.1 vs. uniprot
Match: A0A6H5JES6_9PHAE (PBPe domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JES6_9PHAE) HSP 1 Score: 628 bits (1620), Expect = 4.840e-208 Identity = 348/559 (62.25%), Postives = 391/559 (69.95%), Query Frame = 1 Query: 1357 AQETI---NLRDGGNLTGIALDRCPFPTNGSWADGVVMRDSVLSASTTLVGVTGPLVMSVGEDDDGRDVDTATFCAVNLRPHATQGGRFEVISTLDGGTLESDDGEGFQAISPFQETQTFPAGALKYPTDRPILQGRHLDV--------VMKRDAPPFVFVDGEGTTNDEYTGITSDFLKKLSEVVGFTYTLSAPADGTATSETIEMVRNGTVNMAASWITITSERAEYVSFTYPYFDLGISFVYKPEYAEGGNLWKAFAPFESTLWLTIFVALLVTVFLLWLFEGAKNDQFSRGGWGRRHRTIAR-------------------------------------GLSRSVYVTSSLMMSQLTHKPETLEGYLLTLGWLFTSFVLAASYTAELASYLTASKLETTSLSVDALLSGEISHSKVALLQGGYTQAVFERDFQKCDGLEECSLGVQPLACFSTSECFTMVLNGTALTTLADSATAEYELQNNFCGLTTLPDVLYPQHYGLVLPYGSGLTEELQAATLQLREDGTLGDIEDTYLDASAVCVPVTTSDEDSSNMTIA 2889
AQ+T+ N+ D G L GI LD CPFP NGSWADG +MRDS+LSAS TLVG TGPL MSVGEDDDGRDVDT TFCAVNL+P AT G RFEVISTLDG TL+S+DGEGFQAISPFQE QTFPAGAL YP DRPILQGRH+DV VM+RDAPPFVFVDG+G++ D++TGIT +FL+KL++VVGFTY+L AP +GT T +TIEMVRNG+ +M SWITITSERAEYVSFTYPYFDLGI+FVY P EG N WKAFAPFE++LWL + V+L+VTV LLWLFEGAKNDQFSRGGWGRRHRT+ R G+SRSVYVTSSLMMSQLTHKPETLEGYLLTLGWLFTSFVLAASYTAELAS+LTASKLETT VLNG+ALTTLADSATA+Y+LQN+FCGLTTL +VLYPQ ATLQLREDGTL DIE++YLD S VCVPVTTS+E+SSNMTI+
Sbjct: 2 AQDTLTLANVNDSG-LQGIVLDSCPFPRNGSWADGALMRDSLLSASGTLVGATGPLGMSVGEDDDGRDVDTVTFCAVNLKPDATHGARFEVISTLDGATLDSEDGEGFQAISPFQEAQTFPAGALTYPPDRPILQGRHMDVRTPPGGGVVMRRDAPPFVFVDGDGSSIDDFTGITPEFLEKLADVVGFTYSLRAPPEGTTTPDTIEMVRNGSADMTGSWITITSERAEYVSFTYPYFDLGIAFVYLPTIDEGVNFWKAFAPFEASLWLMLLVSLVVTVVLLWLFEGAKNDQFSRGGWGRRHRTVTRVRQGGDGWGTLMFRMLRIGHASSRGLRGRTGVLHAIAGISRSVYVTSSLMMSQLTHKPETLEGYLLTLGWLFTSFVLAASYTAELASFLTASKLETT------------------------------------------------------------VLNGSALTTLADSATADYQLQNDFCGLTTLAEVLYPQ------------------ATLQLREDGTLIDIEESYLDPSVVCVPVTTSEEESSNMTIS 481
BLAST of mRNA_P-lacustris_contig1013.223.1 vs. uniprot
Match: D7FGS3_ECTSI (PBPe domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGS3_ECTSI) HSP 1 Score: 560 bits (1443), Expect = 1.970e-174 Identity = 348/882 (39.46%), Postives = 494/882 (56.01%), Query Frame = 1 Query: 421 TGLPAVASLCESIESNNSIVAVVSALNTFSTAMMGSLSNEYLDLPIIDVGGTAARAESRNET----LGG---YVLQAQPVIVAQMQAMVRLILDMKLARDALDGRAETTERVWLVHTSDTFGTIATSAFNSALNISVPLPVTSSDVTEVDDDGNEEVVMATVEVAGTVVIAASSEAVYDSELALLVESEASIVVLLAEGFDGSIVRTFLSQANDAGLT-EGVQWYLPNVAAFDHIFDVNSTYRDASLAFDMQGMLGVRSCTPRTGAGSAMAEALSQEWVRLDPNEYPGAGPDGVTADGQIDPFLAFAYDSVFLAAAAAQTAQETINLRDGGNLTGIALDRCPFPTNGSWADGVVMRDSVLSASTTLVGVTGPLVM---------SVGEDDDG-RDVDTATFCAVNLRPHATQGGRFEVISTLDGGTLESDDGE--GFQAISPFQETQTFPAGALKYPTDRPILQGRHLDVVMKRDAPPFVFVDGEGTTNDEYTGITSDFLKKLSEVVGFTYTLSAPADGTATSETIEMVRNGTVNMAASWITITSERAEYVSFTYPYFDLGISFVYKPEYAEGGNLWKAFAPFESTLWLTIFVALLVTVFLLWLFEGAK-NDQFSRG---GWGRRHRTIARGLSRSVYVTSSLMMSQLTHKPETLEGYLLTLGWLFTSFVLAASYTAELASYLTASKLETTSLSVDALLSGEISHSKVALLQGGYTQAVFERDFQKCDGLEECSLGVQ---PLACFSTSECFTMVLNGTALTTLADSATAEYELQNNFCGLTTLPDVLYPQHYGLVLPYGSGLTEELQAATLQLREDGTLGDIEDTYLDAS--AVCVPVTTSDEDSSNMTIADVSGVFFVLGLFVAIAVVSWTCRRSPWAKR 2979
TG A+ LC+++E V TF +++ ++SN++ LP++ +AARA + + LGG Y+ QP + ++M+A+ RLILDMK+ RD G TTERV +++ DT+G +A SAF A+ + + + S+ E+ +++E+A + + Y L+ LVE ASIVV L+EG+DG+ VR+ L QA + GL E VQWYL +A D IF N +Y D+ LA+D +GMLGVR+C G+GS L+ W LD ++YPGAG +T G++DP LA+AYD+VF+ AAA T Q T GG L G + + G W DG +R++ L T +VGVTGP+ G G R + FCA+NL+ HA+ G F T +G F+ ISP+Q+ QTFPAG+ YP DRP L +H V+ + A PF + G +YTGI D L+ LS +GFTY +S +T E I V NGT +M ASW+TI R + VSF+YP+ G+SFVY+PE + N WK F PFE LW+ I +V LLWLF+GAK N+ F+ G G + R ++ G++ S YVT +L+M Q+ H+P T+E Y+LT GW+F F+L AS+TAELAS+L A K E S VD L +G + H++VA+ Q QA +E + C G EC G P+ C++ ECF +V N T TL DS TA Y + + +CGL L D +H+GLVL S E + A L+L E+GTL DI + Y D S A + S N+ + D++GVF +L +FVA ++V W R+S AK+
Sbjct: 38 TGSRAIEGLCDALE-------YVGENGTFGASLLETVSNDFFGLPMVTPSASAARANTYFSSGAYGLGGEGSYLFGVQPDVFSEMEALARLILDMKVERDLDRGWYRTTERVSMIYPDDTYGAVAASAFVRAVRGTEGINIDSNAAGEMP---------SSMELAKSEPVDPILGTDYRPTLSALVEDHASIVVFLSEGYDGAFVRSVLEQALEVGLANEDVQWYLSGPSAMDGIFSHNESYHDSQLAYDFRGMLGVRACPAIKGSGSEALANLTSRWAALDSDKYPGAGFGTLTPGGRLDPLLAYAYDAVFVLAAAVATVQSTAT-DWGGVLEGFVTGK----SAGLWQDGAFIREAALG--TEIVGVTGPVAFRESTSAVTSGAGTAGSGWRRTNGTEFCALNLQAHASLGATFATTMLWKPETFVDSNGTLATFENISPYQKNQTFPAGSDVYPFDRPTLSRQHFKVITEEAAVPFAVITGRENQTGDYTGIALDLLEVLSGRLGFTYNISVANASISTDEVIGYVSNGTYDMVASWVTINERRLDTVSFSYPFMATGLSFVYRPEVLDKVNWWKMFQPFERPLWMLIIGTTVVMFALLWLFDGAKKNELFTDGVPTATGSKRR-LSSGMAMSSYVTGALLMGQMAHEPYTVESYILTSGWMFACFILGASFTAELASFLAAEKEEALSFGVDDLKNGAVPHTQVAVRQEDGLQAFYEEEIMGCYGAAECYGGEDENFPVTCYTIEECFELVDNETVKVTLVDSVTAAYRVADEYCGLDILSDTFNKEHFGLVLEKDSPYLGEFELALLELEEEGTLADIAEPYFDTSRCAYLEDYEDASSTSQNLKLVDLAGVFLILTMFVAASLVVWVFRKSFQAKK 895
BLAST of mRNA_P-lacustris_contig1013.223.1 vs. uniprot
Match: D7FGS4_ECTSI (PBPe domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FGS4_ECTSI) HSP 1 Score: 549 bits (1415), Expect = 4.380e-172 Identity = 336/850 (39.53%), Postives = 479/850 (56.35%), Query Frame = 1 Query: 514 AMMGSLSNEYLDLPIIDVGGTAARAESRNET----LGG---YVLQAQPVIVAQMQAMVRLILDMKLARDALDGRAETTERVWLVHTSDTFGTIATSAFNSALNISVPLPVTSSDVTEVDDDGNEEVVMATVEVAGTVVIAASSEAVYDSELALLVESEASIVVLLAEGFDGSIVRTFLSQANDAGLT-EGVQWYLPNVAAFDHIFDVNSTYRDASLAFDMQGMLGVRSCTPRTGAGSAMAEALSQEWVRLDPNEYPGAGPDGVTADGQIDPFLAFAYDSVFLAAAAAQTAQETINLRDGGNLTGIALDRCPFPTNGSWADGVVMRDSVLSASTTLVGVTGPLVM---------SVGEDDDG-RDVDTATFCAVNLRPHATQGGRFEVISTLDGGTLESDDGE--GFQAISPFQETQTFPAGALKYPTDRPILQGRHLDVVMKRDAPPFVFVDGEGTTNDEYTGITSDFLKKLSEVVGFTYTLSAPADGTATSETIEMVRNGTVNMAASWITITSERAEYVSFTYPYFDLGISFVYKPEYAEGGNLWKAFAPFESTLWLTIFVALLVTVFLLWLFEGAKNDQFSRG---GWGRRHRTIARGLSRSVYVTSSLMMSQLTHKPETLEGYLLTLGWLFTSFVLAASYTAELASYLTASKLETTSLSVDALLSGEISHSKVALLQGGYTQAVFERDFQKCDGLEECSLGVQ---PLACFSTSECFTMVLNGTALTTLADSATAEYELQNNFCGLTTLPDVLYPQHYGLVLPYGSGLTEELQAATLQLREDGTLGDIEDTYLDAS--AVCVPVTTSDEDSSNMTIADVSGVFFVLGLFVAIAVVSWTCRRSPWAKR 2979
+++ ++SN++ LP++ +AARA + + LGG Y+ QP + ++M+A+ RLILDMK+ RD G TTERV ++++ DT+G +A SAF A+ + + + S+ E+ +++E+A + + Y L+ LVE ASIVVLL+EG+DG+ VR+ L QA + GL E VQWYL +A D IF N +Y D+ LA+D +GMLGVR+C G+GS L+ W LD ++YPGAG +T G++DP LA+AYD+ F+ A A Q T GG L G + G W DG +R++ L T +VGVTGP+ G G R + FCA+NL+ HA+ G FE T +G F+ ISP Q+ QTFP+G YP DRP L +H +V+ + PF F+ +EYTGI D L+ LS +GFTY +S +T E I V NGT +M ASW+TI+ R + VSF+YP+ G+SFVY+PE + N WK F PFE LW+ I +V V LLWLF+GAKN+ F+ G G + R ++ G++ S YVT +L+M Q+ H P T+E Y+LT GW+F F+L AS+TAELAS+L A K E S VD L +G + H++VA+ Q QA +E + C G EC G P+ C++ ECF +V N T TL DS TA Y + + +CGL L + H+GLVL S E + A L+L E+GTL DI + Y D S A + S N+ + D++GVF +L +F+A ++V W R+S AK+
Sbjct: 7 SLLETVSNDFFGLPMVTPSASAARANTYFSSGAYGLGGKGSYLFGVQPDVFSEMEALARLILDMKVERDLDRGWYRTTERVSMIYSDDTYGAVAASAFVRAVRRTEGMNIDSTAAGEMP---------SSIELAKSEPVNTILGTDYRPTLSALVEDRASIVVLLSEGYDGTFVRSVLEQALEVGLANEDVQWYLSGASAMDGIFSHNESYHDSQLAYDFRGMLGVRACPAIQGSGSEALANLTSRWEALDSDKYPGAGIGTLTPGGRLDPLLAYAYDAAFVLATAVAAVQSTA-ADWGGVLEGFVTGKAA----GLWQDGAFIREAALG--TEIVGVTGPVAFRESASTVTSGAGTAGSGWRRTNGTEFCALNLQAHASLGATFEATMLWRPETFVDTNGTLATFEKISPNQKNQTFPSGGDVYPFDRPTLSRQHFEVITEEATVPFAFITRRENQTEEYTGIALDLLEVLSGRLGFTYNISVANSSVSTDEVIGYVSNGTYDMVASWVTISERRLDTVSFSYPFMATGLSFVYRPEVLDKVNWWKMFQPFERQLWILITGTTVVMVALLWLFDGAKNEIFTDGVPTATGSKRR-LSSGMAMSSYVTGALLMGQMVHAPYTVESYILTSGWMFACFILGASFTAELASFLAAEKEEALSFGVDDLKNGAVPHTQVAVRQEDTLQAFYEEEIMGCYGEAECYGGGDQNVPVTCYTIDECFELVDNETVKVTLVDSITAAYRVADEYCGLDILSETFNKGHFGLVLEKDSPYLGEFELAMLELEEEGTLADITEPYFDTSRCAYLEDYEGASSTSQNLKLVDLAGVFLILTMFMAASLVVWVFRKSFQAKK 839
BLAST of mRNA_P-lacustris_contig1013.223.1 vs. uniprot
Match: A0A6H5J962_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J962_9PHAE) HSP 1 Score: 315 bits (807), Expect = 1.210e-94 Identity = 176/243 (72.43%), Postives = 195/243 (80.25%), Query Frame = 1 Query: 520 MGSLSNEYLDLPIIDVGGTAARAESRNETLGGYVLQAQPVIVAQMQAMVRLILDMKLARDALDGR------------------AETTERVWLVHTSDTFGTIATSAFNSALN-ISVPLPVTSSDVTEVDDDGNEEVVMATVEVAGTVVIAASSEAVYDSELALLVESEASIVVLLAEGFDGSIVRTFLSQANDAGLTEGVQWYLPNVAAFDHIFDVNSTYRDASLAFDMQGMLGVRSCTPRTG 1191
MGSLSNEYLDLP++ V GTAARAESRNET GGY+L QP +V QMQA+VRLILDMKLARDA+DGR +ETTERVWLVHTSDTFGTIAT+AFN+A ISV LP TS G EE ATVEVAGTVVIAASSEA++DSELA LV++EASI+VLLAE FDG+IVRT LSQAN+AGLTEGVQWYLPNVAAFDH+FD NSTYRDASLAFDM+G LGVR+CTPRTG
Sbjct: 1 MGSLSNEYLDLPLMSVAGTAARAESRNETEGGYLLHTQPGVVPQMQALVRLILDMKLARDAVDGRREGGGAEARERERNPLLLSETTERVWLVHTSDTFGTIATAAFNNAATTISVALPNTSDXXXXXXXIGEEE--RATVEVAGTVVIAASSEAMFDSELATLVDNEASIIVLLAEAFDGAIVRTVLSQANEAGLTEGVQWYLPNVAAFDHVFDRNSTYRDASLAFDMRGALGVRACTPRTG 241
BLAST of mRNA_P-lacustris_contig1013.223.1 vs. uniprot
Match: D7G990_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G990_ECTSI) HSP 1 Score: 256 bits (654), Expect = 1.450e-72 Identity = 160/249 (64.26%), Postives = 176/249 (70.68%), Query Frame = 1 Query: 2713 HYGLVLPYGSGLTEELQAATLQLREDGTLGDIEDTYLDASAVCVPVTTSDEDSSNMTIADVSGVFFVLGLFVAIAVVSWTCRRSPWAKRFKERRRRANDGGAEQSVIDTYAKMSRQQQKAFAMQATINLLQHSKELSASSKTMAISATGDEAKEDSDAP-----TAPLVPGAAAQGAGGXXARRSGRREAGFRREIAEGRPVVTLGGG-----DSFTRRGLSLGGLFSRLSGRHDNGGVVDNDGHDGNP 3429
HYGLVLPYGSGLTEELQAATLQLREDGTL DIE+TYLD SAVCVPVTTS+E+SSNMT++DVSGVFFVLG FV A VSW RRSPWAKR KERRR G AEQSV+D+YAKMSR QQKAFAMQAT+NLLQHS+ELSASSKT+ + + AK+ DA XX R+ EA FRRE+AEGRPVV +GGG FTRR SL GL SRL GR GG G GNP
Sbjct: 61 HYGLVLPYGSGLTEELQAATLQLREDGTLSDIEETYLDPSAVCVPVTTSEEESSNMTVSDVSGVFFVLGFFVIAATVSWCFRRSPWAKRAKERRRLEKGGAAEQSVMDSYAKMSRGQQKAFAMQATVNLLQHSRELSASSKTL-MEGISEGAKKVPDAAGXXXXXXXXXXXXXXXXXXXXXXXRAAPGEAEFRREMAEGRPVVGIGGGMGDSDQGFTRRAPSLSGLLSRLPGRRGGGGAX---GDGGNP 305
BLAST of mRNA_P-lacustris_contig1013.223.1 vs. uniprot
Match: A0A6H5JG95_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG95_9PHAE) HSP 1 Score: 237 bits (604), Expect = 1.500e-63 Identity = 136/321 (42.37%), Postives = 188/321 (58.57%), Query Frame = 1 Query: 2041 GISFVYKPEYAEGGNLWKAFAPFESTLWLTIFVALLVTVFLLWLFEGAKNDQFSRG---GWGRRHRTIARGLSRSVYVTSSLMMSQLTHKPETLEGYLLTLGWLFTSFVLAASYTAELASYLTASKLETTSLSVDALLSGEISHSKVALLQGGYTQAVFERDFQKCDGLEECSLGVQ---PLACFSTSECFTMVLNGTALTTLADSATAEYELQNNFCGLTTLPDVLYPQHYGLVLPYGSGLTEELQAATLQLREDGTLGDIEDTYLDAS--AVCVPVTTSDEDSSNMTIADVSGVFFVLGLFVAIAVVSWTCRRSPWAKR 2979
G+SFVY+PE + N WK F PFE LW+ I +V LLWLF+GAKN+ F G + R ++ G++ S YVT +L+M Q+ H+P T+E Y+LT GW+F F+L AS+TAELAS+L+A K E S VD L +G + H++VA+ Q QA +E + C G EC G P+ C++ ECF +V N T TL DS TA Y + + +CGL L D H+GLVL S E + A L+L E GTL +I + Y D S A + S N+T+ D++GVF VL +FVA ++V W R+S AK+
Sbjct: 4 GLSFVYRPEVVDKVNWWKMFEPFERPLWMLIVGTTVVMFTLLWLFDGAKNELFMDKVPTATGSKRR-LSSGMAMSSYVTGALLMGQMAHEPYTVESYILTSGWMFACFILGASFTAELASFLSAEKEEALSFGVDDLKNGAVPHTQVAVRQDDTLQAFYEEEIMGCYGAAECYGGEDENFPVTCYTIEECFELVDNETVKVTLVDSVTAAYRVADEYCGLDILSDTFNKAHFGLVLEEDSPYLGEFELALLELEEAGTLAEIAEPYFDTSRCAYLEDYEDASSTSQNLTLVDLAGVFLVLTMFVAASLVVWVFRKSFRAKK 323
BLAST of mRNA_P-lacustris_contig1013.223.1 vs. uniprot
Match: A0A5J4YHV8_PORPP (Glutamate receptor ionotropic, kainate 2 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YHV8_PORPP) HSP 1 Score: 181 bits (458), Expect = 1.200e-43 Identity = 150/415 (36.14%), Postives = 214/415 (51.57%), Query Frame = 1 Query: 1753 GRHLDVVMKRDAPPFVFVDGEGTTNDE-YTGITSDFLKKLSEVVGFTYTLSAPADGTATSETIEMV-RNGTVNMAASWITITSERAEYVSFTYPYFDLGISFVYKPEYAEGGNLWKAFAPFESTLWLTIFVALLVTVFLLWLFEGAKNDQFSRGGWGRRHRTIARGLSRSVYVTSSLMMSQLTHKPETLEGYLLTLGWLFTSFVLAASYTAELASYLTASKLETTSLSVDALLSGEISHSKVALLQGGYT---QAVFERDFQKCDGLEECSLGVQPLACFSTSECFTMVLNGTALTTLADSATAEYEL--QNNFCGLTTLPDVLYPQHYGLVLPYGSGLTEELQAATLQLREDGTLGDIEDTYLDASAVCVPVTTSDEDSSNMTIADVSGVFFVLGLFVAIA----VVSWTCRRS 2964
G H D+++ R APPFVF+D + + E Y+G + D ++ LS ++ FTYT+ A +T+ ++V N T+NMA S TITS R V FT P+F LG+ V+ P + +LW+ F PFE +W I VA +V + LFE ND RG R I + + S+Y + Q T PET EG LL +G F+LAA+YTAELAS+LTA+K+ VD +GEI+ VA + T + E F + + L+ Q C+ + EC MV NGTA T+ D+ AEY L + +F L L V+ PQ YG+VL T A L LRE L + + A + V SD+ +TI +V G+F +L + + IA +V W R+
Sbjct: 132 GTHYDIIVGR-APPFVFIDPDTSLGIERYSGYSVDLIEILSVMLNFTYTIQGEAGVGSTAVISQVVDENNTINMAISAFTITSARLAIVDFTQPFFLLGLRIVHNPR-PDSQDLWRIFVPFEPLVWGLIVVAFVVILLSYALFEHGLNDAEFRG------RPI-KDVFLSLYYVFQTAVQQSTPLPETTEGRLLMIGSTAFFFILAATYTAELASFLTANKVFELISDVDQ--NGEINEIDVASVSEILTLLADSSIESWFVQ-NALQNAPRNYQ--YCYRSFECLEMVANGTAGATILDAPAAEYLLGTEASFSSLELLGAVMNPQGYGIVLRQDDPNTPFFNRAILLLRETSMLAQLRALWFPA----LRVGDSDDALDPVTIQEVGGIFIILAIILGIAWLFYIVRWILYRT 528
BLAST of mRNA_P-lacustris_contig1013.223.1 vs. uniprot
Match: A0A7S1TK83_9RHOD (Hypothetical protein n=1 Tax=Erythrolobus australicus TaxID=1077150 RepID=A0A7S1TK83_9RHOD) HSP 1 Score: 172 bits (436), Expect = 4.880e-41 Identity = 137/399 (34.34%), Postives = 205/399 (51.38%), Query Frame = 1 Query: 1786 APPFVFVDGEGTTNDE-YTGITSDFLKKLSEVVGFTYTLSAPADGTATSETIEMVRNGT--VNMAASWITITSERAEYVSFTYPYFDLGISFVYKPEYAEGGNLWKAFAPFESTLWLTIFVALLVTVFLLWLFEGAKNDQFSRGGWGRRHRTIARGLSRSVYVTSSLMMSQLTHKPETLEGYLLTLGWLFTSFVLAASYTAELASYLTASKLETTSLSVDALLSGEISHSKVALLQGGYTQAVFERDFQKCDGLEECSLGVQPLA---CFSTSECFTMVLNGTALTTLADSATAEYELQNN--FCGLTTLPDVLYPQHYGLVLPYGSGLTEELQAATLQLREDGTLGDIEDTYLDASAVCVPVTTSDEDSSNMTIADVSGVFFVLGLFVAIAVVSWTCR 2958
APPFVF+D + + E Y+G + D ++ +++ +GF Y + A G +S I V+NGT NMA S TITS R V FT P+FDLG+ V++P+ E ++++ F PFE +W I + L FE + ND R L S+Y T ++ Q++ + ET EG L +G + F++AA+YTAELAS+LT SK+ VD +GEI+ ++ L + + A+ + L E QP + C+S+ EC TMV NG+ T+ D AEY L +N F GL L + Q YG++L A L LRE G L ++ + A V T D+ +T+ ++SG+F +LGLF+A A + W R
Sbjct: 111 APPFVFIDPDTSLGIERYSGYSIDLVELIAKRLGFEYDIEGEA-GVGSSAIIAAVQNGTNGYNMATSAFTITSSRLAVVRFTQPFFDLGLRIVHEPKPLEP-SVFRIFIPFEGAVWGCIAGCFALIALCLAFFEASYNDSEFRSN-------SINNLFLSMYYTFQTVVQQVSMQAETTEGRLTLMGAMAFFFIIAATYTAELASFLTLSKVFQIITDVDH--NGEIN--QIDLAEYVHVIAILAGSSIESWLLNEVMDPGQPRSYRVCYSSVECLTMVKNGSVAGTVLDGPFAEYLLASNSDFDGLELLGSPMNLQGYGVILREADPNLNLFDQAVLSLRESGALEELRQKWFPALLVS---TNEDDQLQAVTLDEISGIFIILGLFLAAAWIYWIIR 493
BLAST of mRNA_P-lacustris_contig1013.223.1 vs. uniprot
Match: A0A1X6P527_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P527_PORUM) HSP 1 Score: 152 bits (383), Expect = 3.610e-33 Identity = 237/989 (23.96%), Postives = 399/989 (40.34%), Query Frame = 1 Query: 340 IRLGVEHVNSEGVLLEDKEVTV----FTHARTGLPAVASLCESIESNNSIVAVVSALNTFSTAMMGSLSNEYL----------DLPIIDVGGTA-------------ARAESRNETLGGYVLQAQPVIVAQMQAMVRLILDMKLARDALDGRAETT----ERVWLVHTSDTFGTIATSAFNSALNISVPLPVTSSDVTEVDDDGNEEVVMATVEVAGTVVIAASSEAVYDSELAL--LVESEASIVVLLAEGFDGSIVRTFLSQANDAG-LTEGVQWYLPNVAAFDHIFDVNSTYRDASLAFDMQGMLGVRSCTPRTGAGSAMAEALSQEWVRLDPNEYPGAGPDGVTADGQ--IDPFLAFAYDSVFLAAAAAQTAQETINLRDGGNLTGIALDRCPFPTNGS-----WADGVVMRDSVLSASTTLVGVTGPLVMSVGEDDDGRDVDTATFCAVNLR--------PHATQGGRFEVISTLDG---------------------------------------GTLESD---------------------DGEGFQAISPFQETQTFPAGALKYPTDRPILQGRHLDVVMKRDAPPFVFVDGEGTTNDEYTGITSDFLKKLSEVVGFTYTLSAPADGTATSETIEMVRNGTVNMAASWITITSERAEYVSFTYPYFDLGISFVYKPEYAEGGNLWKAFAPFESTLWLTIFVALLVTVFLLWLFEGAKNDQFSRGGWGRRHRTIARGLSRSVYVTSSLMMSQLTHKPETLEGYLLTLGWLFTSFVLAASYTAELASYLTASKLETTSLSVDALLSGEISHSKVALLQGGYTQAVFERDFQKCDGLEECSLGVQPLA-CFSTSECFTMVLNGTALTTLADSATAEYELQNNFCGLTTLPDVLYPQHYGLVLPYGSGL--TEELQAATLQLREDGTLGDIEDTYLDASAVCVPVTTSDEDSSNMTIADVSGVFFVLG-LFVAIAVVSWTCRRSP 2967
+RLG + G +L +TV + L LC +I S AV SA + ++T +G L +++L ++P++ TA A S + Y+ P ++ A+V LI+ MK RDA+ R + ER+ ++++ D FG + ++ +S +SS +DD +T+ V +++ S+ D+ LAL L ++ IVV+ + QA G L +G QW + A + +F S A LA G+L V P SA A+AL RL + PDG D Q +D F ++A + A A A+ A + DGG G D+ F TN W G ++ + G++G L SV G A++ NL+ A G ++ DG G +D D G A+ Q +P YP+DRP+++ R L V+ + APPFVF + ++G++ + +++E + Y L + + TA++ ++ V NGTV++A SW T+T+ER V+FT PY LG+ F+ + + L PF + LW + +++ LL FEG + G R ++ ++Y ++ + P T+EG ++T G++F + ++ +SY AEL S+LT SK + S+ L S ++ S+V + GG QA E + C C + C S+ EC+ + + D EY+ + C + + + Y Q YG++ L +++ L+L+EDG L +E + SA V E + + ++ +F G +F+ AV + SP
Sbjct: 141 VRLGFADATAPGGVLPPDAMTVELVPIDTKASLLAGTHILCRTISSE---AAVASAADAYAT--VGPLDSDFLWLATVTAYQWNVPLVSSAATALALNSVDDSELWPVNATSASGEPTSYLFHTVPRDDLRVTAVVELIVRMKRQRDAVRARRPWSIYGSERIGVLYSEDQFG--QSGMYSLYRRLSAARAASSSG--GLDD--------STIPVRLVRMLSIPSDG--DAWLALQDLHNADVRIVVVWSAFLVPGAAAILFEQAGRLGMLGDGHQWIV--TAPGETLFGPGSKVTPA-LARRAVGILTVEPTVPAGRLTSAPAQALL---TRLAAAGAAASPPDG---DRQFVLDTFASYALYAYDAAGAVARAAAAVV--ADGGFPEGP--DKKRFATNACHWGAPWMGGEAFHKAL--SGVAFPGLSGDLNYSVPYAARG-----ASYIVQNLQLAPQSATAAAAASGAXXXXXNSADGSXXXXXXXXXXXXXXGSLGVRWVDLLRFDIPPAPPPNRTGASAADAAATDLALGNRAGSWTRMRVSDVRGAAAVR-----QVYPGLRRLYPSDRPVIRSRKLRVLTQH-APPFVFHKTFPDGTESFSGLSLELWNRVAEALLVDYELESISAATASNVMVDRVANGTVDLALSWTTVTAERMRRVTFTQPYHYLGLRFLVLADSVKV-ELSSLARPFSNALWGLVLASVVAFAGLLHWFEGDDDPD----GDFRDAASLPSACVNAIYHAGLTLVQDREYAPVTVEGRVITFGYVFFALIIVSSYAAELFSFLTFSKTDAVISSLADLQSNKVPLSRVGIETGGSVQAYIEEEILGC--FPNCPRPPKAYTPCVSSLECYKKLQAREVTVLINDGPVLEYQAMTD-CSVVVVGEPFYDQGYGIMQRTDPDLQLVDDISNTILRLQEDGYLQQLETRWFSRSACPSAV---GEAGERLGVKSLASIFVATGSVFLLAAVFHGLVKHSP 1073 The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig1013.223.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-lacustris_contig1013.223.1 >prot_P-lacustris_contig1013.223.1 ID=prot_P-lacustris_contig1013.223.1|Name=mRNA_P-lacustris_contig1013.223.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=1187bp MVAVVASRWLFTALISALLTATNGVRTLVVLLPPSEGEEGAEANYFSLAPback to top mRNA from alignment at P-lacustris_contig1013:4110..30563+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-lacustris_contig1013.223.1 ID=mRNA_P-lacustris_contig1013.223.1|Name=mRNA_P-lacustris_contig1013.223.1|organism=Pleurocladia lacustris SAG_25_93|type=mRNA|length=26454bp|location=Sequence derived from alignment at P-lacustris_contig1013:4110..30563+ (Pleurocladia lacustris SAG_25_93)back to top Coding sequence (CDS) from alignment at P-lacustris_contig1013:4110..30563+ >mRNA_P-lacustris_contig1013.223.1 ID=mRNA_P-lacustris_contig1013.223.1|Name=mRNA_P-lacustris_contig1013.223.1|organism=Pleurocladia lacustris SAG_25_93|type=CDS|length=7122bp|location=Sequence derived from alignment at P-lacustris_contig1013:4110..30563+ (Pleurocladia lacustris SAG_25_93)back to top |