mRNA_P-lacustris_contig1012.222.1 (mRNA) Pleurocladia lacustris SAG_25_93
|
Overview
Homology
BLAST of mRNA_P-lacustris_contig1012.222.1 vs. uniprot
Match: A0A6H5JUL1_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JUL1_9PHAE) HSP 1 Score: 919 bits (2376), Expect = 0.000e+0 Identity = 503/757 (66.45%), Postives = 580/757 (76.62%), Query Frame = 3
Query: 144 MVYPSFEGMVAAGGDIEDGGGAQTPLLGEMTE-QR--GSIISVTGSAISDTDTHSSLLSQDGV-PMPSESDNISSSGDVVGVDFTAA------FSSTPKRTLSEDEMRAEQENPSSGGGQLRKACDLCTKRKRKCNGQHPCSQCIEAGV--QCVYSPRLKSGRKKKVRIDGVLYEEGSYGGELTLVSAGARRQSVSPSAVRFSPSPAVGLAGHVENFFLATYLRDFNRIVPLTTESSVTEGMLEVLSPTVSSRGLATANPIKQPESRRQAKLAVFWGVVAMGSRILGAADESTTRYLGLMRAALRECFDCNDKEVVQAYLLLSTVETMRGNEAAGKRYLDHAHTMHNGNAMGPEGKLLKDRSEQDKSLDILFRIYDQPDGCITGFNRSGAVGDWRLK--------------HRGDGSSSSSSLEESPSAVEQMITEAMAPPTDSQSSALKALKYLSTACGLSTEVFDPTNKCVTVKQYLGEMDSALKGVNSLFVATDLGECITGVMMVKIWGGVTVLMKSWGNREDKDLGLAQVEEGVGYALTRPGLFTFPLWWHALHCAAVTLAHFGRNDTYMRLRATFNKNTFPGTEMPSIEAYT-SSCCPQLGGSCTKLAYWLQVRGTMLREPEWSPQFANNRLSEDCESAAYMAYVEGAKMCSA----SGATTGGK---AKETLNQSSPHPLN---GADLVDG-SPLRVALDAGLSEIGAQFDGLSGLEML-GCSADLDLDLGLGAEFDFSQLAQEPEIVEAN 2297
MV P+ EGMV +I+ GGG+ +G+ + QR I S + S SD D+HS L D + M S+S ++SSSG FT+ S T KR+LS++E E S G QLRKACDLCTKRKRKCNG+HPCSQC E GV QCVYSPRLKSGRKKK RIDGVLYEEG+YGGEL + G R++V PSA RFS S AVGLAGHVENFFLATYLRDFNR+VPLTTESSVTEGMLEVLSP VSSRGLATANPIKQPE+RRQA+LAVFWGVVAMGSRILGAADEST RYLGLMR+ALRECFDCNDKEVVQAYLLLSTVETMRGNEAAGKRYLDHAHTMHNGNA+GPEGKLL+DRSEQD SLD++F++YDQPDG ++GFNRSGAVGDWR H G GS S SAV+QMI +A++PP++ QSS LKALKYLST CGLS+EVFDPTNKCVTVKQYL EMDSALKG +SLFVATDL ECITGV++VKI+GGVT+LM+SWG ED+D+GLAQVEEGVGYALTRPGLFTFP+WWHALHCAA+ LAHFGRNDTYMRLRATFNK TFPGTEMPSIE Y+ +S CPQLGG+C+KLAYWLQVRGTM + EW PQF+ +RLS+ E+AAY A +E C SGA G+ A E P+P++ +D+V+G S LR AL+AGL+EIG F+ L GL++L G ADL +EFD SQL ++VEA+
Sbjct: 1 MVQPNGEGMVMIRDEIDSGGGSLLSEIGKQPQLQRRISKISSSSSSTTSDMDSHSLLSGHDSLGSMLSDSGSVSSSGGGTRGSFTSVDAEGSNSSGTNKRSLSDEEQLRLVEQEQSHGQQLRKACDLCTKRKRKCNGKHPCSQCTETGVPNQCVYSPRLKSGRKKKFRIDGVLYEEGTYGGELARANPGGVRRNVDPSAGRFSASGAVGLAGHVENFFLATYLRDFNRLVPLTTESSVTEGMLEVLSPAVSSRGLATANPIKQPETRRQARLAVFWGVVAMGSRILGAADESTVRYLGLMRSALRECFDCNDKEVVQAYLLLSTVETMRGNEAAGKRYLDHAHTMHNGNAIGPEGKLLRDRSEQDVSLDLVFQMYDQPDGAVSGFNRSGAVGDWRRNQNATKGSPTSPEQTHSGGGSDSGKPT----SAVDQMIAQAVSPPSECQSSPLKALKYLSTVCGLSSEVFDPTNKCVTVKQYLAEMDSALKGAHSLFVATDLSECITGVVIVKIFGGVTMLMRSWGQLEDRDIGLAQVEEGVGYALTRPGLFTFPMWWHALHCAAICLAHFGRNDTYMRLRATFNKTTFPGTEMPSIEDYSPASVCPQLGGNCSKLAYWLQVRGTMCADLEWKPQFSRSRLSDASENAAYAAALERRYSCGKHKKRSGAAWCGERWGAAEAPKHPVPNPVDQVSASDIVEGGSQLRAALNAGLAEIGTPFNDLGGLDILEGSGADLXXXXXXXSEFDLSQLESPEQVVEAS 753
BLAST of mRNA_P-lacustris_contig1012.222.1 vs. uniprot
Match: A0A836CBP3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBP3_9STRA) HSP 1 Score: 236 bits (601), Expect = 6.670e-62 Identity = 171/541 (31.61%), Postives = 253/541 (46.77%), Query Frame = 3
Query: 339 SDNISSSGDVVGVDFTAAFSSTPKRTLSEDEMRAEQE--NPSSGGGQLRKACDLCTK-RKRKCNGQHPCSQCIEAGVQCVYSPRLKSGRKKKVRIDGVLYEEGSYGGELTLVSAGARRQSVSPSAVRFSPSPAVGLAGHVENFFLATYLRDFNRIVPLTTESSVTEGMLEVLSPTVSSRGLATANPIKQPESRRQAKLAVFWGVVAMGSRILGAADESTTRYLGLMRAALRECFDCNDKEVVQAYLLLSTVETMRGNEAAGKRYLDHAHTMHNGNAMGPEGKLLKDRSEQDKSLDILFRIYDQPDGCITGFNRSGAVGDWRLKHRGDGSSSSSSLEESPSAVEQMITEAMAPPTDSQSSALKALKYLSTACGLSTEVFDPTNKCVTVKQYLGEMDSALKGVNSLF-VATDLGECITGVMMVKIWGGVTVLMKS----------WGNREDKDLGLAQVEEGVGYALTRPGLFTFPLWWHALHCAAVTLAHFGRNDTYMRLRATFNKNTFPGTEMPSIEAYTSSCCPQLGGSCTKLAYWLQVR 1919
S++ S S + + F FS T E E EQ+ +P GQL A T+ RKC+ Q ++G + P + + K + E +GG V P A F+ SPA+GL GHVEN F+A Y+RD N +P+T+E +V GMLE + L AN RR AKLAVFWGVVA+GSRILGA RY + AALR+CFD +D VVQAYLLL ++ETM GN +RY+ A T+H A + + Q + L+ L +++ + + G ++S ++ + +A +M+ T + AL+ ++ +V DP + C V +L +++A GV + ++ L +C+ V IW G+T+ M GL +V G+ A++RPGL TFPLWWH +HCAA+TL H G Y R +A F+ + +PGT++P +A+ C + WL R
Sbjct: 177 SNSSSGSSEDSSIIFEVPFSMT---AAPEPEPAREQQRTSPPPDDGQLTPAAANSTEGHSRKCSSQ-------QSGDESAGLPVVPAAPKSTAMVVTTADREPLHGG------------LVHPLARPFTASPALGLVGHVENIFIAAYIRDLNNFIPMTSEGAVMSGMLET------GKSLVPANAAPAASKRRSAKLAVFWGVVALGSRILGAPRADVERYRAQVTAALRDCFDEDDPMVVQAYLLLGSLETMLGNCPKARRYMHFAKTVH---ASLRAKSVQEQHQAQLEGLETLLQVF------------GARMCECDAVDEGPCTASGANTAVAAAACSEMLQSIFMARTGQAVKPMDALRLTLGMPNITRKVLDPESPCPIVLAHLHHLENACDGVGVIINTSSVLTDCVAIVAPQMIWHGITLSMSGRIQXXXXXXXXXXXXXXXAGLKEVAAGMELAMSRPGLMTFPLWWHCMHCAAITLQHHGLRADYDRFKAVFDNHCYPGTQLPPFDAFNLDHVCGADNLCRQYQAWLLRR 674
BLAST of mRNA_P-lacustris_contig1012.222.1 vs. uniprot
Match: A0A835YR83_9STRA (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YR83_9STRA) HSP 1 Score: 184 bits (467), Expect = 9.030e-44 Identity = 136/485 (28.04%), Postives = 207/485 (42.68%), Query Frame = 3
Query: 495 CTKRKRKCNGQHPCSQCIEAGVQCVYSPRLKSGRKKKVRIDGVLYEEGSYGGELTLVSAGARRQSVSPSAVRFSPSPAVGLAGHVENFFLATYLRDFNRIVPLTTESSVTEGMLEVLSPTVSSRGLATANPIKQPESRRQAKLAVFWGVVAMGSRILGAADESTTRYLGLMRAALRECFDCNDKEVVQAYLLLSTVETMRGNEAAGKRYLDHAHTMHNGNAMGPEGKLLKDRSEQDKSLDILF--------RIYDQPDGCITGFNRSGAVGDWRLKHRGDGSSSSSSLEESPSAVEQMITEAMAPPTDSQSSALKALKYLSTACGLSTEVFDPTNKCVTVKQYLGEMDSALKGVNSLFVATDLGECITGVMMVKIWGGVTVLMKSWGNREDKDLGLAQVEEGVGYALTRPGLFTFPLWWHALHCAAVTLAHFGRNDTYMRLRATFNKNTFPGTEMPSIEAYTSSCCPQLGGS--CTKLAYWLQVR 1919
C + +R+CN PCS C+ G+ C YSP L L E +GG F PA GL G +EN+FLA+YL+D + PL ES V GM++ AD + AAL CFD D +VV+AYLLL T+ +M GN + KRY + T+H G A G++ +D S + +L R+ D PD + + V QM A S +AL+ + L G +++ D + C V+ L ++ A GV ++ + L +C+ ++ G+T++M+ +G+ +E G+ A+TRPGL TF +WWH LHCAA+T+AH R DTY+RL+ ++++T PGT++PS+ Y + C G C + +WL+ R
Sbjct: 732 CDRMQRQCNAGQPCSTCVRLGLACTYSPDLLP-----------LVEAVYHGGS-------------------FRAGPATGLVGRLENYFLASYLKDLHGFTPLACESIVVRGMMQAF------------------------------------------ADRAA--------AALGACFDEPDVQVVRAYLLLGTLHSMLGNASKAKRYAHFSQTLHAGLA----GQMREDSSWLESECALLQTLIQAYGPRLLDSPDAMRKPPDNPEGID-----------------------VPQMSLMAQRGHVRSPINALRIMIGLQ---GFASKALDHRSTCAEVRHSLLLLEHAWDGVLAVITNSGLQDCVAVTAPQCLYHGITLVMQG-----RLAMGVEHIERGINLAITRPGLVTFTIWWHCLHCAAITMAHLNRVDTYLRLKDVYDRHTHPGTQLPSLADYHADCGSVCGPDQYCQQFRHWLERR 1101
BLAST of mRNA_P-lacustris_contig1012.222.1 vs. uniprot
Match: A0A835Z4T4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4T4_9STRA) HSP 1 Score: 101 bits (251), Expect = 2.840e-18 Identity = 95/364 (26.10%), Postives = 140/364 (38.46%), Query Frame = 3
Query: 915 AKLAVFWGVVAMGSRILGAADESTTRYLGLMRAALRECFDCNDKE---------------------------------------VVQAYLLLSTVETMRGNEAAGKRYLDHAHTMHNG-NAMGPEGKLLKDRSEQDKSLDILFRIYDQPDGCITGFNRSGAVGDWRLKHRGDGSSSSSSLEESPSAVEQMITEAMAPPTDSQSSALKALKYL-----------STACGLSTEVFDPTNKCVTVKQYLGEMDSALKGVNSLFVATDLGECITGVMMVKIWGGVTVLMKSWGNREDKDLGLAQVEEGVGYALTRPGLFTFPLWWHALHCAAVTLAHFGRNDTYMRLRATFNKNTFPGTEMPSIEAY 1853
A AVFW V +GS + GAA T RY ALR CFD D VV AYL L +E M G+ A +RY+ + T++ G A G G S + L L + R+ D S S ++P +++ + A+A S AL+ + +P + V+Q + + A + T L CI + G T+LM+ E + GLA +E+G+ A+ +P L F LWWHA+HC + LAH GR Y+R +A ++ TFPGT++P + Y
Sbjct: 29 ASAAVFWSTVGLGSFLCGAARAVTERYAAFAARALRACFDEPDTXXXXXXXXXXXXXXXXXXXXXKLAGAXXXXXXXXXXXXXXVVHAYLQLGLLEGMLGHYAKARRYVHFSQTLYAGLQAQGQPGSAWD--SNEGGMLSSLIASFGP-----------------RIL---DTSESEQVPPDNPESLD-VPGMALAAKRGKVSRPFDALRIMLGVXXXXXXXXXXXXXXXXXALEPASPTHVVQQNVQHLVDAWDAAGVIMTCTTLSGCIAARAPQLLLRGSTLLMQ-----ERVEEGLADIEQGLALAVQQPNLIRFSLWWHAIHCGVIGLAHHGRIGAYVRTKAVYDAYTFPGTQLPDMPTY 364
BLAST of mRNA_P-lacustris_contig1012.222.1 vs. uniprot
Match: D7FTE0_ECTSI (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTE0_ECTSI) HSP 1 Score: 84.3 bits (207), Expect = 7.660e-13 Identity = 80/275 (29.09%), Postives = 114/275 (41.45%), Query Frame = 3
Query: 471 QLRKACDLCTKRKRKCNGQHP-CSQCIEAGVQCVYSP----------------------------RLKSGRKKKVRIDGVLYEEGSY--GGELTLVSAGAR---RQSVSPSAVRFSPSPAVGLAGHVENFFLATYLRDFNRIVPLTTESSVTEGMLEVL-----SPTVSSRGLATANPIKQPESR---------RQAKL------AVFWGVVAMGSRILGAADESTTRYLGLMRAALRECFDCNDKEVVQAYLLLSTVETMRGNEAAGKRYLDHA 1133
Q K+C C KRKR C+ Q P CS CIE + P + SG K + E SY GG L V+ + R +S R S SPA GL G EN FL + F I+PLTTES+V M+EV+ S G + + + E + R+ L + W +A+G+ + G + E Y+ L +L ECFD E +AYL++S + + G+E +RY+ A
Sbjct: 53 QTYKSCTFCAKRKRACDSQRPRCSLCIEKKQPYCHYPLKPLPKRAAAKPAAARRLSSSSPSSSDCSISSGDASKAKRLAEAQEGASYDTGGVLATVNTRSMPTVRGRMSLKRCRLSSSPATGLVGMPENGFLCDFFGCFG-ILPLTTESTVRNAMVEVMMRQCGGQAYSGTGGSGMEGLAEDEEKDWHGGGALARRHTLPDHPAKCMMWCAIALGALMRGISVEHVMGYVQLAWKSLTECFDGRSVEHARAYLIMSFLHRVIGDEDKNERYMSFA 326
BLAST of mRNA_P-lacustris_contig1012.222.1 vs. uniprot
Match: A0A1Y2ALJ3_9FUNG (Zn(2)-C6 fungal-type domain-containing protein (Fragment) n=1 Tax=Neocallimastix californiae TaxID=1754190 RepID=A0A1Y2ALJ3_9FUNG) HSP 1 Score: 57.8 bits (138), Expect = 7.900e-7 Identity = 22/36 (61.11%), Postives = 29/36 (80.56%), Query Frame = 3
Query: 480 KACDLCTKRKRKCNGQHPCSQCIEAGVQCVYSPRLK 587
KACD+C K+K KC+G +PCS CI++ + CVYSPR K
Sbjct: 20 KACDVCHKKKIKCDGNNPCSNCIDSKIPCVYSPRTK 55
BLAST of mRNA_P-lacustris_contig1012.222.1 vs. uniprot
Match: A0A1Y3NKN2_PIRSE (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Piromyces sp. (strain E2) TaxID=73868 RepID=A0A1Y3NKN2_PIRSE) HSP 1 Score: 58.5 bits (140), Expect = 7.020e-5 Identity = 23/36 (63.89%), Postives = 28/36 (77.78%), Query Frame = 3
Query: 480 KACDLCTKRKRKCNGQHPCSQCIEAGVQCVYSPRLK 587
KACD C K+K KCNG +PCS CI+A + CV+SPR K
Sbjct: 20 KACDACHKKKIKCNGNNPCSNCIDAKIPCVFSPRTK 55
BLAST of mRNA_P-lacustris_contig1012.222.1 vs. uniprot
Match: A0A1Y1V3D1_9FUNG (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Piromyces finnis TaxID=1754191 RepID=A0A1Y1V3D1_9FUNG) HSP 1 Score: 58.5 bits (140), Expect = 7.030e-5 Identity = 23/36 (63.89%), Postives = 28/36 (77.78%), Query Frame = 3
Query: 480 KACDLCTKRKRKCNGQHPCSQCIEAGVQCVYSPRLK 587
KACD C K+K KCNG +PCS CI+A + CV+SPR K
Sbjct: 20 KACDACHKKKIKCNGNNPCSNCIDAKIPCVFSPRTK 55 The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig1012.222.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-lacustris_contig1012.222.1 >prot_P-lacustris_contig1012.222.1 ID=prot_P-lacustris_contig1012.222.1|Name=mRNA_P-lacustris_contig1012.222.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=749bp MVYPSFEGMVAAGGDIEDGGGAQTPLLGEMTEQRGSIISVTGSAISDTDTback to top mRNA from alignment at P-lacustris_contig1012:68035..75867+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-lacustris_contig1012.222.1 ID=mRNA_P-lacustris_contig1012.222.1|Name=mRNA_P-lacustris_contig1012.222.1|organism=Pleurocladia lacustris SAG_25_93|type=mRNA|length=7833bp|location=Sequence derived from alignment at P-lacustris_contig1012:68035..75867+ (Pleurocladia lacustris SAG_25_93)back to top Coding sequence (CDS) from alignment at P-lacustris_contig1012:68035..75867+ >mRNA_P-lacustris_contig1012.222.1 ID=mRNA_P-lacustris_contig1012.222.1|Name=mRNA_P-lacustris_contig1012.222.1|organism=Pleurocladia lacustris SAG_25_93|type=CDS|length=4494bp|location=Sequence derived from alignment at P-lacustris_contig1012:68035..75867+ (Pleurocladia lacustris SAG_25_93)back to top |