mRNA_P-lacustris_contig1012.221.1 (mRNA) Pleurocladia lacustris SAG_25_93
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Overview
Homology
BLAST of mRNA_P-lacustris_contig1012.221.1 vs. uniprot
Match: A0A6H5JZ96_9PHAE (4a-hydroxytetrahydrobiopterin dehydratase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZ96_9PHAE) HSP 1 Score: 170 bits (430), Expect = 1.610e-52 Identity = 83/94 (88.30%), Postives = 87/94 (92.55%), Query Frame = 1
Query: 1 LASLPRWTSSPDRDFIVRSFVAKNFVSAMAFLNGVATVAEEQGHHPDLHLTQYRNVEIRLQTHSMGGVTRNDIVEARLLDQVPVTYSPKWLREN 282
LASLP WTS+P+ DFIVRSFVAKNFVSAMAFLN VATVAEEQGHHPDLHLTQYRNVEIRLQTHSMGGVT+NDI EARL DQ+ VTYSPKW REN
Sbjct: 35 LASLPLWTSTPNGDFIVRSFVAKNFVSAMAFLNEVATVAEEQGHHPDLHLTQYRNVEIRLQTHSMGGVTQNDIAEARLFDQLSVTYSPKWQREN 128
BLAST of mRNA_P-lacustris_contig1012.221.1 vs. uniprot
Match: D7G856_ECTSI (4a-hydroxytetrahydrobiopterin dehydratase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G856_ECTSI) HSP 1 Score: 172 bits (437), Expect = 1.130e-51 Identity = 83/94 (88.30%), Postives = 88/94 (93.62%), Query Frame = 1
Query: 1 LASLPRWTSSPDRDFIVRSFVAKNFVSAMAFLNGVATVAEEQGHHPDLHLTQYRNVEIRLQTHSMGGVTRNDIVEARLLDQVPVTYSPKWLREN 282
LASLP WTS+P+ DFI+RSFVAKNFVSAMAFLN VATVAEEQGHHPDLHLTQYRNVEIRLQTHSMGGVT+NDI EARL DQ+PVTYSPKW REN
Sbjct: 183 LASLPLWTSTPNGDFIIRSFVAKNFVSAMAFLNEVATVAEEQGHHPDLHLTQYRNVEIRLQTHSMGGVTQNDIAEARLFDQLPVTYSPKWQREN 276
BLAST of mRNA_P-lacustris_contig1012.221.1 vs. uniprot
Match: K8Z8Y7_NANGC (4a-hydroxytetrahydrobiopterin dehydratase n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=K8Z8Y7_NANGC) HSP 1 Score: 125 bits (313), Expect = 2.240e-34 Identity = 56/97 (57.73%), Postives = 73/97 (75.26%), Query Frame = 1
Query: 1 LASLPRWTSSPDRDFIVRSFVAKNFVSAMAFLNGVATVAEEQGHHPDLHLTQYRNVEIRLQTHSMGGVTRNDIVEARLLDQVPVTYSPKWLRENPEA 291
L SLP W S D + RSF AKNF +A+AF++ V VAE +GHHPDLHLT YR VE+ L TH++GG+T ND++ A L+D +P +YSPKWL+E+PEA
Sbjct: 76 LPSLPLWRLSKDHKRLSRSFTAKNFAAALAFIDAVGAVAECEGHHPDLHLTSYREVEVVLYTHAVGGLTENDLIMAALIDTIPASYSPKWLKEHPEA 172
BLAST of mRNA_P-lacustris_contig1012.221.1 vs. uniprot
Match: A0A6U0TCE5_9STRA (4a-hydroxytetrahydrobiopterin dehydratase n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A6U0TCE5_9STRA) HSP 1 Score: 116 bits (290), Expect = 8.900e-31 Identity = 53/93 (56.99%), Postives = 69/93 (74.19%), Query Frame = 1
Query: 13 PRWTSSPDRDFIVRSFVAKNFVSAMAFLNGVATVAEEQGHHPDLHLTQYRNVEIRLQTHSMGGVTRNDIVEARLLDQVPVTYSPKWLRENPEA 291
P W S + + RSFVAKNF +A+ F+N V +AE +GHHPDLH+T YR V +++ THS+ G+T ND V A L+D +PVTYSPKWLRE+PEA
Sbjct: 92 PLW-SVTEEGRLERSFVAKNFQAALDFVNAVGVIAEREGHHPDLHITSYRTVTVQMYTHSLNGLTENDFVMASLIDALPVTYSPKWLREHPEA 183
BLAST of mRNA_P-lacustris_contig1012.221.1 vs. uniprot
Match: A0A812N154_SYMPI (4a-hydroxytetrahydrobiopterin dehydratase n=1 Tax=Symbiodinium pilosum TaxID=2952 RepID=A0A812N154_SYMPI) HSP 1 Score: 115 bits (289), Expect = 2.810e-30 Identity = 52/94 (55.32%), Postives = 71/94 (75.53%), Query Frame = 1
Query: 1 LASLPRWTSSPDRDFIVRSFVAKNFVSAMAFLNGVATVAEEQGHHPDLHLTQYRNVEIRLQTHSMGGVTRNDIVEARLLDQVPVTYSPKWLREN 282
++SLP WT SPD I R FVAKN+ +AM FLN V+T+AE +GHHPD+H+T YRNV + L TH++GG++ D V A +D++ V YSPKWL+E+
Sbjct: 122 ISSLPNWTLSPDGASISRCFVAKNWAAAMNFLNEVSTLAESEGHHPDVHITSYRNVRVDLSTHAIGGLSLPDFVLAAKVDEIKVEYSPKWLKEH 215
BLAST of mRNA_P-lacustris_contig1012.221.1 vs. uniprot
Match: A0A812W6D9_9DINO (4a-hydroxytetrahydrobiopterin dehydratase (Fragment) n=2 Tax=Symbiodinium TaxID=2949 RepID=A0A812W6D9_9DINO) HSP 1 Score: 115 bits (289), Expect = 5.380e-30 Identity = 52/94 (55.32%), Postives = 70/94 (74.47%), Query Frame = 1
Query: 10 LPRWTSSPDRDFIVRSFVAKNFVSAMAFLNGVATVAEEQGHHPDLHLTQYRNVEIRLQTHSMGGVTRNDIVEARLLDQVPVTYSPKWLRENPEA 291
LP W SPD I R FVAKN+ +AM+FLN V+ +AE++GHHPD+H+T YRNV + L TH++GG++ D V A +DQ+ V YSPKWL+E+P A
Sbjct: 153 LPLWALSPDGASISRCFVAKNWAAAMSFLNEVSVLAEQEGHHPDVHITSYRNVRVELSTHAIGGLSLPDFVLAAKMDQIKVEYSPKWLKEHPVA 246
BLAST of mRNA_P-lacustris_contig1012.221.1 vs. uniprot
Match: A0A7S0IZA2_9EUKA (4a-hydroxytetrahydrobiopterin dehydratase n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0IZA2_9EUKA) HSP 1 Score: 112 bits (281), Expect = 1.930e-29 Identity = 52/94 (55.32%), Postives = 71/94 (75.53%), Query Frame = 1
Query: 1 LASLPRWTSSPDRDFIVRSFVAKNFVSAMAFLNGVATVAEEQGHHPDLHLTQYRNVEIRLQTHSMGGVTRNDIVEARLLDQVPVTYSPKWLREN 282
LA+LP WT SP+ I R FVA+N+ +AMAF N V+ +AEE+GHHPDLHLT +RNV + L TH++GG++ D+V A +D + V YSPKWL+E+
Sbjct: 88 LAALPAWTLSPNGTAIRRDFVARNWGAAMAFFNAVSEIAEEEGHHPDLHLTGWRNVGVELSTHAIGGLSLPDLVLAAKIDCIDVDYSPKWLKEH 181
BLAST of mRNA_P-lacustris_contig1012.221.1 vs. uniprot
Match: A0A6U3RQ02_9STRA (4a-hydroxytetrahydrobiopterin dehydratase n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A6U3RQ02_9STRA) HSP 1 Score: 112 bits (280), Expect = 2.270e-29 Identity = 56/98 (57.14%), Postives = 69/98 (70.41%), Query Frame = 1
Query: 1 LASLPRWTSSPDRDFIVRSFVAKNFVSAMAFLNGVATVAEEQGHHPDLHLTQYRNVEIRLQTHSMGGVTRNDIVEARLLDQV-PVTYSPKWLRENPEA 291
L +LP W S D I R FVAKNF +A+ ++N +AE GHHPDLH+TQYRNV + L THS+GG+T ND + A LD V PV YSPKWL+E+PEA
Sbjct: 76 LGNLPLWKLSEDGTKISRGFVAKNFQAALDWINTAGHIAELNGHHPDLHITQYRNVCVTLWTHSVGGLTENDFLLAEQLDTVAPVKYSPKWLKEHPEA 173
BLAST of mRNA_P-lacustris_contig1012.221.1 vs. uniprot
Match: A0A7S2L402_9STRA (4a-hydroxytetrahydrobiopterin dehydratase n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2L402_9STRA) HSP 1 Score: 110 bits (276), Expect = 3.030e-29 Identity = 56/99 (56.57%), Postives = 69/99 (69.70%), Query Frame = 1
Query: 1 LASLPRWTSSPDRDF-IVRSFVAKNFVSAMAFLNGVATVAEEQGHHPDLHLTQYRNVEIRLQTHSMGGVTRNDIVEARLLD-QVPVTYSPKWLRENPEA 291
L +LP W F I R F AKNF +A+ +N V +AE +GHHPDLHLT YR+VEI L TH +GGVT ND AR++D +V ++YSPKWLRENPEA
Sbjct: 35 LKNLPLWAQQQHGIFKISRKFTAKNFQAALDCINQVGVIAEREGHHPDLHLTSYRDVEIVLFTHKLGGVTLNDFAIARVIDLEVKISYSPKWLRENPEA 133
BLAST of mRNA_P-lacustris_contig1012.221.1 vs. uniprot
Match: A0A7J7QLT3_9CHLO (4a-hydroxytetrahydrobiopterin dehydratase n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7QLT3_9CHLO) HSP 1 Score: 111 bits (278), Expect = 5.060e-29 Identity = 52/94 (55.32%), Postives = 67/94 (71.28%), Query Frame = 1
Query: 1 LASLPRWTSSPDRDFIVRSFVAKNFVSAMAFLNGVATVAEEQGHHPDLHLTQYRNVEIRLQTHSMGGVTRNDIVEARLLDQVPVTYSPKWLREN 282
LA+LP W + D+ I R FVAKNF++A+ F N A VAEE+GHHPDLHLT YR V++ L TH+ GG+T D V A LD + + YSPKWL++N
Sbjct: 70 LAALPGWQLAQDQGSISRHFVAKNFMAAVKFFNQAAEVAEEEGHHPDLHLTNYREVQVVLSTHAAGGLTMFDFVMAAKLDALDIEYSPKWLKQN 163 The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig1012.221.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-lacustris_contig1012.221.1 >prot_P-lacustris_contig1012.221.1 ID=prot_P-lacustris_contig1012.221.1|Name=mRNA_P-lacustris_contig1012.221.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=97bp LASLPRWTSSPDRDFIVRSFVAKNFVSAMAFLNGVATVAEEQGHHPDLHLback to top mRNA from alignment at P-lacustris_contig1012:62226..62835- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-lacustris_contig1012.221.1 ID=mRNA_P-lacustris_contig1012.221.1|Name=mRNA_P-lacustris_contig1012.221.1|organism=Pleurocladia lacustris SAG_25_93|type=mRNA|length=610bp|location=Sequence derived from alignment at P-lacustris_contig1012:62226..62835- (Pleurocladia lacustris SAG_25_93)back to top Coding sequence (CDS) from alignment at P-lacustris_contig1012:62226..62835- >mRNA_P-lacustris_contig1012.221.1 ID=mRNA_P-lacustris_contig1012.221.1|Name=mRNA_P-lacustris_contig1012.221.1|organism=Pleurocladia lacustris SAG_25_93|type=CDS|length=582bp|location=Sequence derived from alignment at P-lacustris_contig1012:62226..62835- (Pleurocladia lacustris SAG_25_93)back to top |