mRNA_P-lacustris_contig1010.208.1 (mRNA) Pleurocladia lacustris SAG_25_93
You are viewing an mRNA, more information available on the corresponding polypeptide page
|
Overview
Homology
BLAST of mRNA_P-lacustris_contig1010.208.1 vs. uniprot
Match: D7FZW7_ECTSI (DUF2470 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZW7_ECTSI) HSP 1 Score: 498 bits (1282), Expect = 1.100e-171 Identity = 257/299 (85.95%), Postives = 277/299 (92.64%), Query Frame = 1 Query: 199 MEASGESNESAAEKKQ--AGHSPPKAXXXXXXXXXXXXPEEEALAARIQEHQKSAARLTHTEEVRNLMEYSTGFGVLSTNSRTLKGYPSGSVVGFSLDDKGRPLFAFSSMSAHTGDLAADSRVSLTVTAAAFKGAADGRVSLIGDVNKVPEEDLPTVREMYKKKHPNAYWVDFGDFRLMRMDTIKAMRFVGGFAMAGDINPEEYISTAPDAVAEFSAPILQHMNDDHSGTTQALVKHYIMGGVEVTSAQITGVDRLGMYVVVGMPDGQSGKLRLPFPRPAESRKDVKTLIVEMTQAAMA 1089
MEASG+S ESA EKK+ +GHSPPKA PE+EALAARIQEHQ++AARL+HTEEVRNLM+YSTGFGVLSTNSRTL+GYPSGSVVGFSLDDKGRPLFAFSSMSAHTGDLAADSRVSLTVTAA FKGAADGRVSLIGDVNKVPEEDLP+VREMYKKKHPNAYWVDFGDFRLMRMDTIKAMRFVGGFAMAGD+NPE+Y++TAPDAVAEFSAPI +HMNDDHS TT+A++ H+I GGVEVTSAQIT VDRLGMYV+VGMPDGQSGKLRLPFPRPAESRKDVKTLIVEMTQAAMA
Sbjct: 1 MEASGDSAESATEKKEEASGHSPPKATGHAAGPGPQRSPEQEALAARIQEHQQAAARLSHTEEVRNLMQYSTGFGVLSTNSRTLEGYPSGSVVGFSLDDKGRPLFAFSSMSAHTGDLAADSRVSLTVTAATFKGAADGRVSLIGDVNKVPEEDLPSVREMYKKKHPNAYWVDFGDFRLMRMDTIKAMRFVGGFAMAGDVNPEDYLTTAPDAVAEFSAPISKHMNDDHSDTTRAMIAHFITGGVEVTSAQITAVDRLGMYVLVGMPDGQSGKLRLPFPRPAESRKDVKTLIVEMTQAAMA 299
BLAST of mRNA_P-lacustris_contig1010.208.1 vs. uniprot
Match: A0A836CG39_9STRA (DUF2470 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CG39_9STRA) HSP 1 Score: 353 bits (905), Expect = 5.560e-115 Identity = 178/259 (68.73%), Postives = 212/259 (81.85%), Query Frame = 1 Query: 307 PEEEALAARIQEHQKSAARLTHTEEVRNLMEYSTGFGVLSTNSRTLKGYPSGSVVGFSLDDKGRPLFAFSSMSAHTGDLAADSRVSLTVTAAAFKGAADGRVSLIGDVNKVPEEDLPTVREMYKKKHPNAYWVDFGDFRLMRMDTIKAMRFVGGFAMAGDINPEEYISTAPDAVAEFSAPILQHMNDDHSGTTQALVKHYIMGGVEVTSAQITGVDRLGMYVVVGMPDGQSGKLRLPFPRPAESRKDVKTLIVEMTQAA 1083
PE+EAL+ARIQEHQ+SAARLT EEV+ L+ YSTGFGVLSTNS+ L+GYP+GSVVGF LDD GRPLFAFS+MSAHT DL AD R S+T+ AA FKGA+DGRV+LIGDV +VPE+++ VR YK KHPNA+WVDFGDF RMDTIKA+RFVGGFAMAGDI E+Y++T PD +A F+ PI+ HMN DHS +T A+V+HYI GG +V SA + GVDR GM V+V M G+SGKLRLPFP PA+ RK VK IVEMT+AA
Sbjct: 23 PEQEALSARIQEHQRSAARLTKAEEVKTLVAYSTGFGVLSTNSKKLEGYPNGSVVGFGLDDAGRPLFAFSTMSAHTSDLGADGRASMTIMAANFKGASDGRVTLIGDVGRVPEDEIEAVRTSYKVKHPNAFWVDFGDFSWFRMDTIKAIRFVGGFAMAGDITSEDYLATKPDPIAGFAEPIMTHMNSDHSDSTAAMVEHYITGGAKVDSATLVGVDRKGMNVLVAM-GGESGKLRLPFPSPADDRKAVKDRIVEMTRAA 280
BLAST of mRNA_P-lacustris_contig1010.208.1 vs. uniprot
Match: A0A7S4FQ63_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4FQ63_9EUGL) HSP 1 Score: 306 bits (785), Expect = 1.060e-95 Identity = 154/258 (59.69%), Postives = 198/258 (76.74%), Query Frame = 1 Query: 310 EEEALAARIQEHQKSAARLTHTEEVRNLMEYSTGFGVLSTNSRTLKGYPSGSVVGFSLDDKGRPLFAFSSMSAHTGDLAADSRVSLTVTAAAFKGAADGRVSLIGDVNKVPEEDLPTVREMYKKKHPNAYWVDFGDFRLMRMDTIKAMRFVGGFAMAGDINPEEYISTAPDAVAEFSAPILQHMNDDHSGTTQALVKHYIMGGVEVTSAQITGVDRLGMYVVVGMPDGQSGKLRLPFPRPAESRKDVKTLIVEMTQAA 1083
EE LA +QEHQK AARL+H E+ RN+M+Y TG+GV+STNS + GYPSGS+VG++ DDKGRP+F+FS+MS+HT D+ D RVSLTVT FKGAADGRVSL GD+ +VP+E+ V MY KKHP+A+WV FGDF RM+ IK +R++GGFA AG I PEEY +TAPDA+A F+ P++ HMN DH A+V HY+ ++V +A I G+DRLGM ++V +GQS KLRLPFPRPA +RK+VK LIVEMT+A+
Sbjct: 109 EEMKLAQALQEHQKEAARLSHAEDARNMMQYGTGYGVISTNSESDDGYPSGSIVGYAPDDKGRPVFSFSTMSSHTQDIQKDPRVSLTVTVEGFKGAADGRVSLTGDLVRVPKEEKEAVAAMYLKKHPDAFWVQFGDFSWWRMENIKTIRYIGGFARAGSITPEEYEATAPDAIAAFATPVMSHMNADHGDANVAMVNHYLP--IQVEAANIVGLDRLGMDMMVTR-EGQSFKLRLPFPRPATNRKEVKDLIVEMTKAS 363
BLAST of mRNA_P-lacustris_contig1010.208.1 vs. uniprot
Match: A0A7S4EVY0_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4EVY0_CHRCT) HSP 1 Score: 293 bits (749), Expect = 2.530e-90 Identity = 152/261 (58.24%), Postives = 196/261 (75.10%), Query Frame = 1 Query: 310 EEEALAARIQEHQKSAARLTHTEEVRNLMEYSTGFGVLSTNSRTLKGYPSGSVVGFSLDDKGRPLFAFSSMSAHTGDLAAD---SRVSLTVTAAAFKGAADGRVSLIGDVNKVPEEDLPTVREMYKKKHPNAYWVDFGDFRLMRMDTIKAMRFVGGFAMAGDINPEEYISTAPDAVAEFSAPILQHMNDDHSGTTQALVKHYIMGGVEVTSAQITGVDRLGMYVVVGMPDGQSGKLRLPFPRPAESRKDVKTLIVEMTQAA 1083
EE+A+ A++ HQ+ AARL+ E+ R+L+ YSTG+GVLST S++L G+PSGSVVGF++DDKG P+F FS MS H DL A + +LTVTA FKGAA+GRV+L+G V +VP ++ +RE+Y+ KHPNA+WVDFGDF +MD +KA+RFVGGFA AGD+ PEEY+ D + F+ P+++HMN DHS T +V+HYI G EV A++ +DRLGM V V GQS KLRLPFPRPAESRKDVKTLIVEMTQA+
Sbjct: 110 EEKAVQAKVMAHQQDAARLSKAEDSRSLVAYSTGYGVLSTMSKSLPGFPSGSVVGFAIDDKGLPIFCFSGMSGHAQDLLASPDAAPAALTVTANDFKGAAEGRVTLVGTVRRVPSDEADPLREIYRAKHPNAFWVDFGDFSWFKMDELKAVRFVGGFARAGDMTPEEYMQAEVDPIQAFAKPVMEHMNADHSDATTLMVQHYI-GLPEVEDAKVAALDRLGMTVQVTRK-GQSFKLRLPFPRPAESRKDVKTLIVEMTQAS 368
BLAST of mRNA_P-lacustris_contig1010.208.1 vs. uniprot
Match: A0A7S0LER7_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LER7_9EUKA) HSP 1 Score: 276 bits (706), Expect = 5.990e-84 Identity = 148/270 (54.81%), Postives = 194/270 (71.85%), Query Frame = 1 Query: 310 EEEALAARIQEHQKSAARLTHTEEVRNLMEYSTGFGVLSTNSRTLKGYPSGSVVGFSLDDKGRPLFAFSSMSAHTGDLAADSR-------VSLTVTAAAFKGAADGRVSLIGDVNKVPEEDLPT--VREMYKKKHPNAYWVDFGDFRLMRMDTIKAMRFVGGFAMAGDINPEEYISTAPDAVAEFSAPILQHMNDDHSGTTQALVKHYIMGGVEVTSAQITGVDRLGMYVVVGMPDGQSGKLRLPFPRPAESRKDVKTLIVEMTQAAMAN 1092
EE+ + + EHQ+SAARL+ E+ R+L+ YSTG+ VLST S L GYPSG++VGF+ D++G P F FS+MS+HT DL A R +L VTA F+GAADGRV+LIGDV++V +E + +RE+Y++KHPNA+WVDFGDF RM +KA+ FVGGFA AG I+PE Y++ D + F+AP++ HMNDDHS +T A+V HYI G +V A++ +DRLG V V GQ+ KLRLPFPRPA RKDVKTLIVEMT+AA+ N
Sbjct: 86 EEKIVQTAVMEHQRSAARLSQAEDARSLVGYSTGYAVLSTLSSALDGYPSGALVGFAHDERGLPFFCFSAMSSHTKDLVAAERSCESGGKAALCVTAKGFEGAADGRVTLIGDVSRVKKEQVEEQGLRELYRQKHPNAFWVDFGDFTFYRMHELKAINFVGGFARAGSIDPEAYMNAVIDPIQAFAAPVMSHMNDDHSSSTTAMVMHYI-GLPQVEKAELVQLDRLGFMVQVTRL-GQTFKLRLPFPRPAGDRKDVKTLIVEMTRAALGN 353
BLAST of mRNA_P-lacustris_contig1010.208.1 vs. uniprot
Match: A0A7S3U682_9SPIT (Hypothetical protein n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3U682_9SPIT) HSP 1 Score: 276 bits (705), Expect = 6.800e-84 Identity = 147/265 (55.47%), Postives = 196/265 (73.96%), Query Frame = 1 Query: 310 EEEALAARIQEHQKSAARLTHTEEVRNLMEYSTGFGVLSTNSRTLKGYPSGSVVGFSLDDKGRPLFAFSSMSAHTGDLAAD---SRVSLTVTAAAFKGAADGRVSLIGDVNKVP-EEDLPTVREMYKKKHPNAYWVDFGDFRLMRMDTIKAMRFVGGFAMAGDINPEEYISTAPDAVAEFSAPILQHMNDDHSGTTQALVKHYIMGGVEVTSAQITGVDRLGMYVVVGMPDGQSGKLRLPFPRPAESRKDVKTLIVEMTQAAMAN 1092
EE+ + A + EHQK AARL+ E+ R+L+ YS+G+ VLST S+ L GYPSGS+VGF+ DDKG PLF FS+MS+HT DL D ++ +LTVTA F+GAADGRV+L+GDV +V EE+L T+R+ Y++KHP+A+WVDFGDF RM +KA+RFVGGFA AGDI P++Y + D + F+ P++ HMN+DHS +T A+V HYI G +V A + +DRLG V V GQ+ KLRLPFPR AE RKDVK LIV+MTQ ++++
Sbjct: 76 EEKKVQAAVMEHQKGAARLSQAEDARSLIGYSSGYAVLSTLSKQLDGYPSGSLVGFATDDKGLPLFCFSAMSSHTQDLMRDPKGAKAALTVTATGFEGAADGRVTLVGDVARVKDEEELVTLRKTYREKHPDAFWVDFGDFSWWRMRELKAVRFVGGFARAGDIAPDDYQAATVDPIQAFAKPVMNHMNEDHSDSTIAMVMHYI-GLNQVEKASLVALDRLGFMVQVTRL-GQTFKLRLPFPRAAEDRKDVKNLIVQMTQESLSD 338
BLAST of mRNA_P-lacustris_contig1010.208.1 vs. uniprot
Match: A0A6T8CG84_9EUKA (Hypothetical protein n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A6T8CG84_9EUKA) HSP 1 Score: 266 bits (679), Expect = 3.930e-81 Identity = 138/263 (52.47%), Postives = 192/263 (73.00%), Query Frame = 1 Query: 310 EEEALAARIQEHQKSAARLTHTEEVRNLMEYSTGFGVLSTNSRTLKGYPSGSVVGFSLDDKGRPLFAFSSMSAHTGDLAADSRVSLTVTAAAFKGAADGRVSLIGDVNKVPEEDLPT--VREMYKKKHPNAYWVDFGDFRLMRMDTIKAMRFVGGFAMAGDINPEEYISTAPDAVAEFSAPILQHMNDDHSGTTQALVKHYIMGGVEVTSAQITGVDRLGMYVVVGMPDGQSGKLRLPFPRPAESRKDVKTLIVEMTQAAMAN 1092
EE+ + + EHQ+ AARL+ E+ R+L+ Y++G+ VLST S+ + GYPSGS+VGF+ D+KG P+F FS+MS HT DLA + +L VTA F+GAADGRV+LIGDV + +E++ ++E+Y+ KHPNA+WVDFGDF RM +KA+ FVGGFA AG+ +P +Y+ + D + F+AP++ HMN DHS +T A+V HYI G +V A++ +DRLG V V GQ+ KLRLPFPR AE RKDVKTLIV+MTQA++++
Sbjct: 3 EEKRVQTAVMEHQRGAARLSQAEDSRSLVAYNSGYAVLSTLSKAVDGYPSGSLVGFATDEKGLPVFCFSAMSGHTKDLAKAGKAALCVTAKGFEGAADGRVTLIGDVKRCSKEEVEADGLKELYRAKHPNAFWVDFGDFTWYRMTELKAVNFVGGFARAGNPSPADYMDASVDPIQAFAAPVMGHMNADHSESTIAMVMHYI-GLPQVEKAELVQLDRLGFMVQVTRT-GQTFKLRLPFPRAAEDRKDVKTLIVQMTQASLSD 263
BLAST of mRNA_P-lacustris_contig1010.208.1 vs. uniprot
Match: R1D7B7_EMIHU (DUF2470 domain-containing protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1D7B7_EMIHU) HSP 1 Score: 264 bits (674), Expect = 2.400e-80 Identity = 140/261 (53.64%), Postives = 192/261 (73.56%), Query Frame = 1 Query: 310 EEEALAARIQEHQKSAARLTHTEEVRNLMEYSTGFGVLSTNSRTLKGYPSGSVVGFSLDDKGRPLFAFSSMSAHTGDLA-ADSRVSLTVTAAAFKGAADGRVSLIGDVNKVPEEDLPT--VREMYKKKHPNAYWVDFGDFRLMRMDTIKAMRFVGGFAMAGDINPEEYISTAPDAVAEFSAPILQHMNDDHSGTTQALVKHYIMGGVEVTSAQITGVDRLGMYVVVGMPDGQSGKLRLPFPRPAESRKDVKTLIVEMTQAA 1083
EE+A+ A + EHQ+ AARLT E+ R+L+ YS+G+ VLST S + GYP+G++VGF+ D G P+F FS+MS+HT DL+ + +LTVTA F+GAADGRV+LIGDV +V +E + ++E+Y+++HPNA+WVDFGDF RM ++KA+ FVGGFA A +P+EY+S D + F+AP++ HMNDDH+ +T A+V HY+ G +V +AQ+ +DRLG V V GQ+ KLRLPFPR A RKDVK+LIVEMTQAA
Sbjct: 7 EEKAVQAAVMEHQRGAARLTMAEDARSLVAYSSGYAVLSTLSSQVDGYPNGALVGFAPDASGLPVFVFSAMSSHTKDLSKVGGQAALTVTAKGFEGAADGRVTLIGDVERVGKEQVEKEGLKELYRERHPNAFWVDFGDFTFYRMASLKAVNFVGGFARAAAPSPDEYLSAEVDPIQAFAAPVMGHMNDDHAESTVAMVMHYV-GLPDVEAAQLVALDRLGFMVQVTR-QGQTFKLRLPFPRAAADRKDVKSLIVEMTQAA 265
BLAST of mRNA_P-lacustris_contig1010.208.1 vs. uniprot
Match: A0A7R9ZB21_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9ZB21_9STRA) HSP 1 Score: 264 bits (675), Expect = 3.770e-79 Identity = 138/266 (51.88%), Postives = 181/266 (68.05%), Query Frame = 1 Query: 307 PEEEALAARIQEHQKSAARLTHTEEVRNLMEYSTGFGVLSTNSRTLKGYPSGSVVGFSLDDKGRPLFAFSSMSAHTGDLAADSRVSLTVTAAAFKGAADGRVSLIGDVNKVPEEDLPTVREMYKKKHPNAYWVDFGDFRLMRMDTIKAMRFVGGFAMAGDINPEEYISTAPDAVAEFSAPILQHMNDDHSGTTQALVKHYIMGGVEVTSAQITGVDRLGMYVVVGMP-----DGQSGKLRLPFPRPAESRKDVKTLIVEMTQAAMA 1089
PEE + EHQ++A +L ++R L++Y+ GF V+STNS+ GYP GSVVGF+ D++GRP+F FS MS HT DL AD R SLT+ A FKGAADGRV+L+G V+KVP E+ ++++Y +KHP A+WV FGDF RMD IK +RFVGGFA AG + P+EY PD ++ F + + HMN+DH +T A++ I G ++VT A IT VD LGMYV V Q KLRLPFPR A+ RKDVK +IVEMT++A A
Sbjct: 120 PEEMKIQQAFAEHQQNAPKLGWATDIRTLVQYNHGFAVMSTNSKANPGYPGGSVVGFAPDEEGRPVFIFSGMSTHTQDLLADPRCSLTIAAKEFKGAADGRVNLMGKVSKVPPEECEALKQLYLEKHPGAFWVHFGDFNWFRMDDIKDIRFVGGFARAGSVTPQEYSEAKPDPISAFGSHVANHMNEDHMDSTIAMIADQIPG-MDVTDAVITSVDSLGMYVKVSRTPRASDQPQQFKLRLPFPRQAKDRKDVKDIIVEMTRSAAA 384
BLAST of mRNA_P-lacustris_contig1010.208.1 vs. uniprot
Match: A0A7S3TA66_EMIHU (Hypothetical protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3TA66_EMIHU) HSP 1 Score: 263 bits (671), Expect = 7.180e-79 Identity = 139/261 (53.26%), Postives = 192/261 (73.56%), Query Frame = 1 Query: 310 EEEALAARIQEHQKSAARLTHTEEVRNLMEYSTGFGVLSTNSRTLKGYPSGSVVGFSLDDKGRPLFAFSSMSAHTGDLA-ADSRVSLTVTAAAFKGAADGRVSLIGDVNKVPEEDLPT--VREMYKKKHPNAYWVDFGDFRLMRMDTIKAMRFVGGFAMAGDINPEEYISTAPDAVAEFSAPILQHMNDDHSGTTQALVKHYIMGGVEVTSAQITGVDRLGMYVVVGMPDGQSGKLRLPFPRPAESRKDVKTLIVEMTQAA 1083
EE+A+ A + EHQ+ AARLT E+ R+L+ YS+G+ VLST S + GYP+G++VGF+ D G P+F FS+MS+HT DL+ + +LTVTA F+GAADGRV+LIGDV +V +E + ++E+Y+++HPNA+WVDFGDF R+ ++KA+ FVGGFA A +P+EY+S D + F+AP++ HMNDDH+ +T A+V HY+ G +V +AQ+ +DRLG V V GQ+ KLRLPFPR A RKDVK+LIVEMTQAA
Sbjct: 83 EEKAVQAAVMEHQRGAARLTMAEDARSLVAYSSGYAVLSTLSSQVDGYPNGALVGFAPDASGLPVFVFSAMSSHTKDLSKVGGQAALTVTAKGFEGAADGRVTLIGDVERVGKEQVEKEGLKELYRERHPNAFWVDFGDFTFYRLASLKAVNFVGGFARAAAPSPDEYLSAEVDPIQAFAAPVMGHMNDDHAESTVAMVMHYV-GLPDVEAAQLVALDRLGFMVQVTR-QGQTFKLRLPFPRAAADRKDVKSLIVEMTQAA 341 The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig1010.208.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-lacustris_contig1010.208.1 >prot_P-lacustris_contig1010.208.1 ID=prot_P-lacustris_contig1010.208.1|Name=mRNA_P-lacustris_contig1010.208.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=369bp MRSLLTCGTSSLLLAGVRAFTSSPAGESCARLSLAHNAYRIPTRGSLSRVback to top mRNA from alignment at P-lacustris_contig1010:61175..69540+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-lacustris_contig1010.208.1 ID=mRNA_P-lacustris_contig1010.208.1|Name=mRNA_P-lacustris_contig1010.208.1|organism=Pleurocladia lacustris SAG_25_93|type=mRNA|length=8366bp|location=Sequence derived from alignment at P-lacustris_contig1010:61175..69540+ (Pleurocladia lacustris SAG_25_93)back to top Coding sequence (CDS) from alignment at P-lacustris_contig1010:61175..69540+ >mRNA_P-lacustris_contig1010.208.1 ID=mRNA_P-lacustris_contig1010.208.1|Name=mRNA_P-lacustris_contig1010.208.1|organism=Pleurocladia lacustris SAG_25_93|type=CDS|length=2214bp|location=Sequence derived from alignment at P-lacustris_contig1010:61175..69540+ (Pleurocladia lacustris SAG_25_93)back to top |