mRNA_P-lacustris_contig101.185.1 (mRNA) Pleurocladia lacustris SAG_25_93
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_P-lacustris_contig101.185.1 vs. uniprot
Match: A0A6H5KNU8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNU8_9PHAE) HSP 1 Score: 98.6 bits (244), Expect = 1.230e-21 Identity = 63/117 (53.85%), Postives = 73/117 (62.39%), Query Frame = 1 Query: 7 HPLCSRDPRRIDALVSEVSEARSAEAALRKEAXXXXXXXXXXXXXXXXXXXEKADMTEVHLVQMEKLRRDLEMQAQDGKRRLESELESG-----DKLLLTLKEGKERLERETERLRE 342
HPLCS +P +ID LVSE EA+ AE ALR EA +KAD+TE HL QME+LRRDL+ A+DGKRRLESELE G D+L LTLK E L ET+RLRE
Sbjct: 90 HPLCSGEPGKIDGLVSEAREAKEAEGALRAEAAILRERKAVLDADIRRLERDKADLTEEHLAQMERLRRDLQEDARDGKRRLESELEKGHAKSMDRLRLTLKAEAESLAGETKRLRE 206 The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig101.185.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 1 ZOOMx 1POSITION0
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-lacustris_contig101.185.1 >prot_P-lacustris_contig101.185.1 ID=prot_P-lacustris_contig101.185.1|Name=mRNA_P-lacustris_contig101.185.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=114bp KQHPLCSRDPRRIDALVSEVSEARSAEAALRKEADQLRGRKAILDKDIQQback to top mRNA from alignment at P-lacustris_contig101:58925..59267+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-lacustris_contig101.185.1 ID=mRNA_P-lacustris_contig101.185.1|Name=mRNA_P-lacustris_contig101.185.1|organism=Pleurocladia lacustris SAG_25_93|type=mRNA|length=343bp|location=Sequence derived from alignment at P-lacustris_contig101:58925..59267+ (Pleurocladia lacustris SAG_25_93)back to top Coding sequence (CDS) from alignment at P-lacustris_contig101:58925..59267+ >mRNA_P-lacustris_contig101.185.1 ID=mRNA_P-lacustris_contig101.185.1|Name=mRNA_P-lacustris_contig101.185.1|organism=Pleurocladia lacustris SAG_25_93|type=CDS|length=684bp|location=Sequence derived from alignment at P-lacustris_contig101:58925..59267+ (Pleurocladia lacustris SAG_25_93)back to top |