mRNA_P-lacustris_contig1009.174.1 (mRNA) Pleurocladia lacustris SAG_25_93
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_P-lacustris_contig1009.174.1 vs. uniprot
Match: A0A6H5JET5_9PHAE (3Beta_HSD domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JET5_9PHAE) HSP 1 Score: 671 bits (1730), Expect = 7.090e-235 Identity = 360/517 (69.63%), Postives = 405/517 (78.34%), Query Frame = 1 Query: 34 MLLLAPPSIGSTGISVVLSGGGSFRSTLVGRIATATAAAEVRSSPVLESWDGLKDVLKGADTVYLLSVLDLPPSPNDSDLQAFTAGVGRVVDCCLECGVESLVFTSSPSVRSS--RKQGPTEQDE--DAQARVIAQAEARILDVSGAVSPSRLHTCALRPASFIYGASEQDGPLHRALSWVGWGLNRVAVGPKGTEDA-VKIDMVHLDNLAEAHVLAGARLGEASARDVPSADIEAEQAAGVDKDSDAGAGADVEEVGAKRRQRYHASSRSRAGPACSGKACVVTDGQPRNPQAFLDGILDGLGFATSKVVRVPTAVALLAASVAELVCKVRITATAALKSSDVRALTESRRTHSNARAQRDLGYIPRRVVTFIYQMKSVWTVDPATATRKTVESLKRDGWGKHRILRPSLAYWITNPGGIWLVTLAAFGGPCPAFLESLARNAESVGLWLLNEQSTVRAVCIAIYAIHVLEGVYAFRVARRAGHRDTAPGWFLQTFVLGFPSIFLVNRLKREEKSS 1569
ML+LA PS S +SVVL GGGSF STL GRIATA AEVRSSP+LE+W+GLK+V GADTVYLLS LDLPPSPNDSDLQAFTAGV RVVDCCLECGVE LVFTSS SV SS + QGPTE +E D +AR +A+AEAR+LD SGA SPS LHTCALRPA+FIYG SE+DGPLHRAL WVGWGLNRVAVGPK ED VK+DMVH+DNLAEAH+LAGA+L + + D P+A + D GAG + GA QR S+S A PAC+G+A VTDGQPRNPQAFLD ILDGLGFATSK++RVPT+VALL A VAEL+CKV IT AL SD+R LTE+RRTHSNARAQRD GY+PR VDPATAT++TVESLKRDGW +HR+ RP+LAYWITNPGGIWLVTLAAFGGPCP F E+LAR+A VGL LL EQSTVRAVCIA+Y +HVLEGVYAFRVA AGHRD APGWF QTF+LGFPS+FLVN LKR +S
Sbjct: 1 MLILAQPSASSASVSVVLHGGGSFGSTLAGRIATAAIPAEVRSSPLLENWEGLKEVCTGADTVYLLSALDLPPSPNDSDLQAFTAGVSRVVDCCLECGVEGLVFTSSSSVFSSAEKAQGPTEHEEEDDVKARTVARAEARVLDASGATSPSHLHTCALRPAAFIYGLSEKDGPLHRALLWVGWGLNRVAVGPKCPEDGGVKVDMVHVDNLAEAHLLAGAKLKKRAETDAPNAMV------------DVGAGVE----GADAEQRRGPGSKSEAAPACAGRAYDVTDGQPRNPQAFLDEILDGLGFATSKLLRVPTSVALLVARVAELLCKVGITTAPALTRSDIRGLTEARRTHSNARAQRDFGYVPR--------------VDPATATKRTVESLKRDGWARHRVRRPALAYWITNPGGIWLVTLAAFGGPCPPFTEALARSAGHVGLRLLKEQSTVRAVCIAVYLVHVLEGVYAFRVAWHAGHRDAAPGWFAQTFLLGFPSVFLVNDLKRAASTS 487
BLAST of mRNA_P-lacustris_contig1009.174.1 vs. uniprot
Match: D7FV37_ECTSI (3Beta_HSD domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV37_ECTSI) HSP 1 Score: 603 bits (1555), Expect = 6.850e-209 Identity = 324/466 (69.53%), Postives = 364/466 (78.11%), Query Frame = 1 Query: 190 LKDVLKGADTVYLLSVLDLPPSPNDSDLQAFTAGVGRVVDCCLECGVESLVFTSSPSVRSS--RKQGPTEQD--EDAQARVIAQAEARILDVSGAVSPSRLHTCALRPASFIYGASEQDGPLHRALSWVGWGLNRVAVGPKGTEDA-VKIDMVHLDNLAEAHVLAGARLGEASAR-DVPSADIEAEQAAGVDKDSDAGAGADVEEVGAKRRQRYHASSRSRAGPACSGKACVVTDGQPRNPQAFLDGILDGLGFATSKVVRVPTAVALLAASVAELVCKVRITATAALKSSDVRALTESRRTHSNARAQRDLGYIPRRVVTFIYQMKSVWTVDPATATRKTVESLKRDGWGKHRILRPSLAYWITNPGGIWLVTLAAFGGPCPAFLESLARNAESVGLWLLNEQSTVRAVCIAIYAIHVLEGVYAFRVARRAGHRDTAPGWFLQTFVLGFPSIFLVNRLKREEKSS 1569
+ V GADTVYLLS LDLPPSPNDSDLQAFTAGV RV++CCLECGVE LVFTSS SV SS + QGPTE + +D +AR +A+AEAR+LD SGA SPSRLHTCALRPA+F+YG SE+DGPLHRALSWVGWGL+RVAVGPK ED VK+DMVHLDNLAEAH+LAGARL + A D P+A ++ GADV GA QR S++ A PAC+GKA VTDGQPRNPQAFLD ILDGLGFATSK++RVPT VALLAA VAEL+CKV IT AL SD+R LTE+RRTHSNARAQRD GY+PR VDPA A ++TVESLKRDGW +HR+ RP+LAYWITNPGGIWLVTLAAFGGPCPAF E LAR+A VGL LL EQSTVRAVCIA+Y +HVLEGVYAFRVAR AGHRD APGWF QTF+LGFPS+FLVN LKR E +S
Sbjct: 18 ISQVCTGADTVYLLSALDLPPSPNDSDLQAFTAGVSRVIECCLECGVEGLVFTSSSSVFSSAEKAQGPTEHEGEDDMKARAVARAEARVLDASGATSPSRLHTCALRPAAFVYGTSEKDGPLHRALSWVGWGLDRVAVGPKCPEDGGVKVDMVHLDNLAEAHLLAGARLKKKRAETDAPNAMVDV--------------GADV--GGAAAEQRRGPGSKTEAAPACAGKAYDVTDGQPRNPQAFLDEILDGLGFATSKLLRVPTTVALLAAWVAELLCKVGITTAPALTRSDIRGLTEARRTHSNARAQRDFGYVPR--------------VDPAAAIKRTVESLKRDGWARHRVRRPALAYWITNPGGIWLVTLAAFGGPCPAFAEPLARSAGHVGLRLLKEQSTVRAVCIAVYLVHVLEGVYAFRVARHAGHRDAAPGWFAQTFLLGFPSVFLVNDLKRAESTS 453
BLAST of mRNA_P-lacustris_contig1009.174.1 vs. uniprot
Match: D8LSA6_ECTSI (3Beta_HSD domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSA6_ECTSI) HSP 1 Score: 243 bits (621), Expect = 1.410e-70 Identity = 163/370 (44.05%), Postives = 204/370 (55.14%), Query Frame = 1 Query: 478 LHTCALRPASFIYGASEQDGPLHRALSWVGWGLNRVAVGPKGTEDAVKIDMVHLDNLAEAHVLAGARLGEASARDVPSADIEAEQAAGVDKDSDAGAGADVEEVGAKRRQRYHASSRSRAGPACSGKACVVTDGQ------------PRNPQAFLDGILDGLGFATSKVVRVPTAVALLAASVAELVCKVRIT-ATAALKSSDVRALTESRRTHSNARAQRDLGYIPRRVVTFIYQMKSVWTVDPATATRKTVESLKRDGWGKHRILRPSLAYWITNPGGIWLVTLAAFGGPCPAFLESLARNAESVGLWLLNEQSTVRAVCIAIYAIHVLEGVYAFRVARRAGHRDTAPGWFLQTFVLGFPSIFLVNRL 1548
L+TCALRP +YGA + D PL RALSW+GWGLNRV + +G +A K DM+ NL +A VLAG +L E GA Q A +R GPACSG++ VTDGQ P QAF+DG+L+GL F TSKV+R+P AL A ELVCK+++T A ++ S+VR L E+R + RA++DLGY PR VD TA R VE LKRDGWG+H +L P L YWI P GIWL +AAF CPAFL + R + + L + + VR VC+ HVLEG YAF A+RAGH DTAP W +QT +LG+PS LV RL
Sbjct: 47 LYTCALRPG-LVYGAGK-DEPLLRALSWMGWGLNRVTL--RGLPEA-KSDMIFFQNLIDATVLAGTQLAE----------------------------------GAAGAQAGGAGWSTRKGPACSGQSYCVTDGQRGGGDGDGGGVQPGGLQAFMDGVLEGLDFTTSKVLRLPVFFALAIAWAMELVCKMKLTEAPPSITRSEVRKLVENRCSDIE-RARKDLGYEPR--------------VDRNTALRTIVEDLKRDGWGRHTLLVPGLGYWICIPLGIWLNAVAAFKALCPAFLAPVQRFSLYIHLAVFRKLWIVRLVCVLAILAHVLEGWYAFVRAKRAGHGDTAPRWLIQTLILGYPSTRLVMRL 362
BLAST of mRNA_P-lacustris_contig1009.174.1 vs. uniprot
Match: A0A2I0WLF7_9ASPA (3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 1 n=2 Tax=Dendrobium catenatum TaxID=906689 RepID=A0A2I0WLF7_9ASPA) HSP 1 Score: 87.8 bits (216), Expect = 1.780e-14 Identity = 121/461 (26.25%), Postives = 187/461 (40.56%), Query Frame = 1 Query: 289 GVGRVVDCCLECGVESLVFTSSPSVRSSRKQ----------GPTEQDEDAQARVIAQAEARILDVSGAVSPSR---------LHTCALRPASFIYGASEQDGPLHRALSWVGWGLNRVAVGPKGTEDAVKIDMVHLDNLAEAHVLAGARLGEASARDVPSADIEAEQAAGVDKDSDAGAGADVEEVGAKRRQRYHASSRSRAGPACSGKACVVTDGQPRNP-QAFLDGILDGLGFATSKV---VRVPTAVA-----------------------LLAASVAELVCKVRITATAALKSSDVRALTESRRTH--SNARAQRDLGYIPRRVVTFIYQMKSVWTVDPATATRKTVESLKRDGWGKHRILRPSLAYWITNPGGIWLVTLAAFGGPCPAFLESLARNAESVGLWLLNEQSTVRAVCIAIYAIHVLEGVYAFRVARRAGHRDTAPGWFLQTFVLGFPS 1527
G V+D C E G+ V+ S+ +V K+ P ++ D R ++ AE +L +G S + LHTCA+RPA+ IYG E+ R LS GL V VG + +VK D V++DNL +A +LA L ++++ + P +G+A ++DG P N + + + L + K+ VR+ ++ LL A V + VC + AA + D +T TH S+ +A +LGY+P V P +T+ S +D K I RP++ +WI GG+ + AF PC R S+ L+L +R V A+H+ E +Y + +ARR + APGWFLQTF+LG+PS
Sbjct: 114 GTCNVLDVCHEIGIRRFVYVSTYNVVFGGKEIINGNESLPYYPIDEHIDPYGRSMSTAEQLVLKSNGRPSDIQVNKKQSDVHLHTCAIRPAA-IYGPGEERY-FARILSLGQIGLLFVRVG----DASVKTDWVYVDNLVQALILASVGL--------------------------------LDDISGRE-----------GNPIAAGQAYFISDGSPVNTFDSIISPLFKSLDYNVPKLTIHVRLALILSQIFWFISMLFYPFLNQPWVPGPLLLPAEVYK-VCSI----VAAAFAIDFTMITRIGVTHYFSHLKATEELGYVPM--------------VSPHEGLNRTI-SYWKDRKQKE-INRPNILFWIFCIGGMLALFYTAFLTPCGPL-----RWLNSLSLFLFRSVFNLRLVFYIAAALHISEAIYIWLLARRKDPAN-APGWFLQTFLLGYPS 498
BLAST of mRNA_P-lacustris_contig1009.174.1 vs. uniprot
Match: W1PV20_AMBTC (3Beta_HSD domain-containing protein n=2 Tax=Amborella trichopoda TaxID=13333 RepID=W1PV20_AMBTC) HSP 1 Score: 84.0 bits (206), Expect = 2.670e-13 Identity = 122/447 (27.29%), Postives = 187/447 (41.83%), Query Frame = 1 Query: 289 GVGRVVDCCLECGVESLVFTSSPSV----------RSSRKQGPTEQDEDAQARVIAQAEARILDVSGAVSPSR----LHTCALRPASFIYGASEQDGPLHRALSWVGWGLNRVAVGPKGTEDAVKIDMVHLDNLAEAHVLAG-ARLGEASARDVPSADIEAEQAAGVDKDSDAGAGADVEEVGAKRRQRYHASSRSRAGPACSGKACVVTDGQPRNPQAFLDGILDGLGFATSKVVRVPTAVALLAASVAELVCKVRITATAA-LKSSDV------RALTESRRTH--SNARAQRDLGYIPRRVVTFIYQMKSVWTVDPATATRKTVESLKRDGWGKHRILRPSLAYWITNPGGIWLVTLAAFGGPCPAFLESLARNAESVGLWLLNEQSTVRAVCIAIYAIHVLEGVYAFRVARRAGHRDTAPGWFLQTFVLGFPSI-FLVNRLKR 1554
G ++D CLE G++ LV+ S+ +V + + DA R + AE +L +G S + LHTCA+RPA+ IYG E+ + R L+ GL +G +D+VK D V++DNL +A +LA A L + R+ P P SG+A + DG P N AFL +L L + K + +++ A + +C T LK S + + + TH S +A+ +LGY+PR V + AT + KR I P++ W+ G+ L+ +AF P A S+ L++ Q +R V A+H +E VYA+ +ARR + A GWF QTF+LGF S+ FL+ R K+
Sbjct: 108 GTCHILDACLEFGIKRLVYVSTYNVVFGGTEIVNGNEALNYFLIDDHVDAYGRSKSIAEQLVLKSNGCHSKEKQGAILHTCAIRPAA-IYGPGEERH-VPRILNLAKMGLLPCKIG----DDSVKSDWVYIDNLVDALLLASMALLDDIPGREGP--------------------------------------------PVASGQAYFINDGAPVNSFAFLRPLLLSLDYDFPK-----STISVHHALILARICSCIYTLLYPWLKCSWLPQPLLPAEVYKVGVTHYFSPLKAKEELGYVPR-----------VSPHEGMAATISYYQERKRKA-----IDGPTIFAWLFCIIGMSLLFCSAF---IPHPYLGQMEWARSLHLFVFRSQFLLRIVFFVAVALHGMEAVYAWYLARRVDPYN-ANGWFWQTFLLGFFSLRFLLKRAKK 479
BLAST of mRNA_P-lacustris_contig1009.174.1 vs. uniprot
Match: UPI001F5D7404 (short-chain dehydrogenase/reductase family 42E member 1 n=1 Tax=Lolium rigidum TaxID=89674 RepID=UPI001F5D7404) HSP 1 Score: 78.2 bits (191), Expect = 1.880e-11 Identity = 120/449 (26.73%), Postives = 182/449 (40.53%), Query Frame = 1 Query: 289 GVGRVVDCCLECGVESLVFTSSPSVRSSRKQ----------GPTEQDEDAQARVIAQAEARILDVSGAVSPS---RLHTCALRPASFIYGASEQDGPLHRALSWVGWGLNRVAVGPKGTEDAVKIDMVHLDNLAEAHVLAGARLGEASARDVPSADIEAEQAAGVDKDSDAGAGADVEEVGAKRRQRYHASSRSRAGPACSGKACVVTDGQPRNPQAFL-DGILDGLGFATSKVVRVPTAVALLAASVAELVCKVRITATAALKSSDV-------RALTESRRTH--SNARAQRDLGYIPRRVVTFIYQMKSVWTVDPATATRKTVESLKRDGWGKHRILR-PSLAYWITNPGGIWLVTLAAFGGPCPAFLESLARNAESVGLWLLNEQSTVRAVCIAIYAIHVLEGVYAFRVARRAGHRDTAPGWFLQTFVLGFPSIFLVNRLKREEK 1563
G V+D C E GV LV+ S+ +V K P E DA R + AE +L +G + S RL+TCA+RPA+ IYG E+ L R +S GL +G VK D V+ DNL A +LA L + D+P + P +G+A + DG+P N F+ +L LG+ +V + T+VAL +++ ++ + L S + + + TH S +A+ +LGY+P P T+ + K R L P++ W+ G+ V AA P LA + L++ +R V + A+HVLEG+YA+ +AR+ R+ A GWF QT LGF S+ + + RE K
Sbjct: 108 GTCNVLDACHEHGVRRLVYVSTYNVVFGGKPIVNGDETLPYFPIEDHVDAYGRSKSIAEQLVLKSNGRQAKSKSTRLYTCAIRPAA-IYGPGEERH-LPRIMSLAKLGLASFKIGGPN----VKTDWVYADNLVLALILASMGLLD----DIPG---------------------------------------RKGTPVAAGQAYFICDGEPVNSFEFIISPLLRKLGYTVPRVT-LDTSVAL---TISRIILFISTLFYPWLDSKWIPQPLVLPAEVYKVGVTHYFSYLKAKGELGYVP--------------ITSPQEGLAATISYWQER---KRRELDGPTIFIWLAVTLGMLAVFSAACLPPVGPLKWVLALH-----LFVFRSMLVIRLVLVVSVALHVLEGIYAWFLARKVDPRN-ATGWFWQTSALGFFSLQFLLKRARESK 480
BLAST of mRNA_P-lacustris_contig1009.174.1 vs. uniprot
Match: A0A3M7KZD4_AUXPR (3Beta_HSD domain-containing protein n=2 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A3M7KZD4_AUXPR) HSP 1 Score: 67.4 bits (163), Expect = 3.030e-8 Identity = 77/259 (29.73%), Postives = 102/259 (39.38%), Query Frame = 1 Query: 289 GVGRVVDCCLECGVESLVFTSSPSV----------RSSRKQGPTEQDEDAQARVIAQAEARILDVSGA--------VSPSRLHTCALRPASFIYGASEQDGPLHRALSWVGWGLNRVAVGPKGTEDAVKIDMVHLDNLAEAHVLAGARLGEASARDVPSADIEAEQAAGVDKDSDAGAGADVEEVGAKRRQRYHASSRSRAGPACSGKACVVTDGQPRNPQAFLDGILDGLGFATSKVVRVPTAVALLAASVAELVCKV 1011
G VV C+ CGV SLV+TS+ + S P + DA +R A AE +L GA RLHT ALRPA+ IYGA E+ L R + G + G + DMVH+DNL EAHVLA L A+ G +G+A ++DG P N F + +L GLGF T + R+P V A + EL+ +V
Sbjct: 74 GTDNVVAACIACGVPSLVYTSTYNTVFGGVEIVAGDESLPLFPLDAHCDAYSRTKALAEQAVLAADGARHVGKDGDPGRGRLHTTALRPAA-IYGAGERRH-LPRTVENARRGWYKCTFGKPSS----LTDMVHVDNLVEAHVLAARSLAHAN------------------------------------------------GGEAAGQAYFISDGSPINMFRFFEPLLVGLGFPTPHL-RLPLLVVYCLAWLTELIWQV 277
BLAST of mRNA_P-lacustris_contig1009.174.1 vs. uniprot
Match: A0A7N0RAB5_KALFE (3Beta_HSD domain-containing protein n=2 Tax=Kalanchoe fedtschenkoi TaxID=63787 RepID=A0A7N0RAB5_KALFE) HSP 1 Score: 63.9 bits (154), Expect = 5.990e-7 Identity = 124/491 (25.25%), Postives = 191/491 (38.90%), Query Frame = 1 Query: 178 SWDGLKDVLKGADTVYLLSVLDLPPSPNDSDLQAF-------TAGVGRVVDCCLECGVESLVFTSSPSVRSSRKQ----------GPTEQDEDAQARVIAQAEARILDVSGAVSPSRLHTCALRPASF----IYGASEQDGPLHRALSWVGWGLNRVAVGPKGTEDAVKIDMVHLDNLAEAHVLAGARLGEASARDVPSADIEAEQAAGVDKDSDAGAGADVEEVGAKRRQRYHASSRSRAGPACSGKACVVTDGQPRNPQAFLDGILDGLGFATSKVVRVPTAVALLAASVAELVCKVRITATAALKSSDVRALTESRR---TH--SNARAQRDLGYIPRRVVTFIYQMKSVWTVDPATATRKTVESLKRDGWGKHRILR-PSLAYWITNPGGIWLVTLAAF---GGPCPAFLESLARNAESVGLWLLNEQSTVRAVCIAIYAIHVLEGVYAFRVARRAGHRDTAPGWFLQTFVLGFPSIFLVNRLKREE 1560
S D ++ L+GAD V+ L+ + + ++ F G R++D C G+ LV+ S+ +V K+ P + D+ R + AE +L ++G PS+ + L + IYG E D L R +S GL VG ED VK D +++DNL A V+A L ++++ K ++ P +G+ + DG P N FL L L + + LL A + + + + E + TH S +A+ +LGY P V P T+ + K R+L P+L W+ GG+ AA+ GP P L R +V L+ S VR V A H+LE VYA+R+A + R+ A GWF QT +LGF S+ L+ LKR +
Sbjct: 68 SKDDVEKALQGADCVFHLASFGM----SGKEMLQFGRVDEVNVNGTCRILDACSALGIRRLVYVSTYNVVFGGKEIVNGNEALPYFPIDDHVDSYGRSKSVAEQLVLKMNG--RPSKKNGKCLYTCAIRPAAIYGPGE-DRHLPRIVSLSKLGLLPFKVG----EDNVKADWIYVDNLVLALVMASMGL--------------------------------LDDIPGKGKK-----------PVAAGQPYFICDGHPVNTFEFLRPFLKSLDYDIPRRSLSVEHALLLGKFFAVFYTILYPWLSRSWLPPPLLLPAEVYKVGVTHYFSYLKAKEELGYTPM--------------VSPKDGMAATISYWQEK---KRRMLDGPTLITWVLVVGGMIATLAAAYLPAVGPVP-----LVR---AVSLFFFRTISVVRLVFHMAVAAHILEAVYAWRLASKVDPRN-AKGWFWQTALLGFFSLRLL--LKRSK 476
BLAST of mRNA_P-lacustris_contig1009.174.1 vs. uniprot
Match: A0A7Y5L0X0_9DELT (NAD-dependent epimerase/dehydratase family protein n=1 Tax=Polyangiaceae bacterium TaxID=2268199 RepID=A0A7Y5L0X0_9DELT) HSP 1 Score: 63.2 bits (152), Expect = 6.230e-7 Identity = 57/183 (31.15%), Postives = 92/183 (50.27%), Query Frame = 1 Query: 178 SWDGLKDVLKGADTVY-LLSVLDLPPSPNDSDLQAFTAGVGRVVDCCLECGVESLVFTSSPSV---RSSRKQG------PTEQDED-AQARVIAQAEARILDVSGAVSPSRLHTCALRPASFIYGASEQDGPLHRALSWVGWGLNRVAVGPKGTEDAVKIDMVHLDNLAEAHVLAGARLGEAS 693
S D L+ L+GA TV+ L S++D+ + N G VVD C E GV LV+TSS V RS +G P + D + ++ + A D +G L TCA+RP + +YG + + ++L + G + +G + + D+V++DN+A AH+LA A+L +A+
Sbjct: 59 SRDDLRGALRGAHTVFHLASIVDVGLTKNPKIDAVNVQGTRNVVDVCRELGVPFLVYTSSEDVVLQRSPIARGDESIPYPIDLIHDYVRTKIEGERIALAADTAGG-----LRTCAVRP-THVYGPRDPHA-IVKSLQELASGRVPILIG----DPRARFDVVYVDNVAHAHLLAAAKLHDAT 230
BLAST of mRNA_P-lacustris_contig1009.174.1 vs. uniprot
Match: K1Q6Y6_CRAGI (Short chain dehydrogenase/reductase family 42E member 1 n=2 Tax=Crassostrea gigas TaxID=29159 RepID=K1Q6Y6_CRAGI) HSP 1 Score: 62.0 bits (149), Expect = 1.780e-6 Identity = 67/266 (25.19%), Postives = 105/266 (39.47%), Query Frame = 1 Query: 190 LKDVLKGADTVYLLSVLDLPPSP--NDSDLQAFTA-GVGRVVDCCLECGVESLVFTSSPSV----------RSSRKQGPTEQDEDAQARVIAQAEARILDVSGAVSPSRLHTCALRPASFIYGASEQDGPLHRALSWVGWGLNRVAVGPKGTEDAVKIDMVHLDNLAEAHVLAGARLGEASARDVPSADIEAEQAAGVDKDSDAGAGADVEEVGAKRRQRYHASSRSRAGPACSGKACVVTDGQPRNPQAFLDGILDGLGFATSKV 948
+++ L+G D VY ++ + N ++A G V+ CL+ ++ LV+TS+ +V S P Q D +R + AE R+L A P LHTCALR A +YG E + R ++ V G + G +D +H+DNL +AH+LAG L E++ R +G+A ++DG P N F +L GLG+ K+
Sbjct: 62 VEEALQGVDCVYHMASYGMSGREQLNTKLIEAVNIQGTENVIQACLKHKIKRLVYTSTYNVIFGGQVICDGEESLPYLPLNQHPDHYSRTKSIAEQRVL---AANEPGTLHTCALRLAG-VYGVGELRH-IPRTVNTVESGYMQALFGKDSLQD-----FLHIDNLVQAHILAGRALMESNKR------------------------------------------------VAAGQAYFISDGAPINTFEFFRPLLSGLGYPLPKI 269 The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig1009.174.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 17 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-lacustris_contig1009.174.1 >prot_P-lacustris_contig1009.174.1 ID=prot_P-lacustris_contig1009.174.1|Name=mRNA_P-lacustris_contig1009.174.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=519bp MLLLAPPSIGSTGISVVLSGGGSFRSTLVGRIATATAAAEVRSSPVLESWback to top mRNA from alignment at P-lacustris_contig1009:43908..51901- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-lacustris_contig1009.174.1 ID=mRNA_P-lacustris_contig1009.174.1|Name=mRNA_P-lacustris_contig1009.174.1|organism=Pleurocladia lacustris SAG_25_93|type=mRNA|length=7994bp|location=Sequence derived from alignment at P-lacustris_contig1009:43908..51901- (Pleurocladia lacustris SAG_25_93)back to top Coding sequence (CDS) from alignment at P-lacustris_contig1009:43908..51901- >mRNA_P-lacustris_contig1009.174.1 ID=mRNA_P-lacustris_contig1009.174.1|Name=mRNA_P-lacustris_contig1009.174.1|organism=Pleurocladia lacustris SAG_25_93|type=CDS|length=3114bp|location=Sequence derived from alignment at P-lacustris_contig1009:43908..51901- (Pleurocladia lacustris SAG_25_93)back to top |