mRNA_P-lacustris_contig1005.151.1 (mRNA) Pleurocladia lacustris SAG_25_93
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_P-lacustris_contig1005.151.1 vs. uniprot
Match: D8LDY0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDY0_ECTSI) HSP 1 Score: 282 bits (721), Expect = 1.130e-79 Identity = 254/570 (44.56%), Postives = 316/570 (55.44%), Query Frame = 1 Query: 1 NFQAASELREHGASTTLRDCFGKTAPQMLEQKKTARHRPWS-SSAISGSSRELSSFRRRLPCPDGPRSATVFGGNPSARPRNGPSGNTKENMSGLAADSDI--RPLDLGQDEIDAGESLSTLQ-RSSRINAEGESV--LTVVVGDREGVGDGDGGYNRSAECWPCDREMAILEHRGTNLRQLDGNSTGITASAIYGGGGDRGRPDHSSPCSFSGLGNEAGHGNSGEEARGAVGGTYPSRNGV-PHRRHCHHPPSTSPGA-DTLLVENSAFGTLSTSETP---GGPASAAGGQARSGTPKDDNDVAAEQLRPHGEVPVK------------VEPSFSRVRHHSAKQGRLVEENAVEERGRRLLNPSRGXXXXXXXXXVRIARTS-SPTQRARRRRCNSRKAGRRRGGKALVPRGRAPGGGEGKDGQARSGGGCG---SPILGRRRFYFPGDEVPEYVIGRRRMRWAQKSAQRHAQLVTDVHRRREEIASPRXXXXXXXXXXXXXXAANELKRKQAIRDSPLRWGRDGRPCSSPAKFLINPRGGSLESYFSSPTQ--LRRRPSTAGPYGGRA 1623
N++ ASEL EHGAST LRD FGK A QMLE K R RPWS SSAI G SRELS+ RR LPC PR+AT G SA R PS +++ S AA++ R L +D+ID G+SLSTL RSS NA+ SV LTVV G G ECW C REMAIL+ + +++ G+ TG +++ Y RG DHSS S SG NEA G G+ G V Y SR GV P + PPS PGA +TLL E S FGTL+T +P GG S +D DVA RP + ++ +E SF VR H+A +G EE+A + XXXXXXXXX R + SP QR+RR AG +RGG+ G A ++ +AR G G G S +RRF+ PGDEVPEYV+GRRRM WAQ+SA+++A+ V+D+ RRREEIASPR A EL+ K+ +R+SPLRW RDGRPCSSPA L + + S SSP + +RRPSTAGPYGGR+
Sbjct: 66 NYETASELLEHGASTALRDNFGKMAQQMLELSKPVRRRPWSGSSAIPGGSRELSACRRGLPCTSRPRTATGISGG-SAHAREAPSASSRGQKSVAAAETAAADRHLHHDRDQIDVGDSLSTLPPRSSVANAKEGSVSALTVVAGAGRDGAVTSGLATSPTECWRCHREMAILDADDRHNQRVAGSCTGAASTSPYDA---RGGLDHSSHYSSSGADNEAA-GPRGDTTGGGV--AYASRTGVAPRQDQLLRPPS--PGAAETLLAEASGFGTLTTDGSPTSVGGXXXXXXXXDASHASRDRADVAG---RPVSQAALQEXXXXXXXANQLLELSFLHVRRHNAGEG---EESASDNLAXXXXXXXXXXXXXXXXXXXRDRISGRSPNQRSRRH------AG-KRGGRRRATTGAAGRRARKRNDRARGGDGAGRGASATGQQRRFFCPGDEVPEYVVGRRRMLWAQRSAEQYARRVSDLKRRREEIASPRRQKMAAAADREKRRAQRELESKERVRNSPLRWDRDGRPCSSPAA-LPAAQSSTEPSSPSSPARGHHQRRPSTAGPYGGRS 612
BLAST of mRNA_P-lacustris_contig1005.151.1 vs. uniprot
Match: A0A6H5L369_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L369_9PHAE) HSP 1 Score: 285 bits (728), Expect = 1.100e-77 Identity = 161/270 (59.63%), Postives = 184/270 (68.15%), Query Frame = 3 Query: 1497 PPVLQSRQVPHQPEGWQ-PRIVFFLADPTSAATVNGRPVRGSCMKCDPRSWYRGKFVGELGGLGFGTERLGAQQGRRQREKGKEERGGMWNMTITDRLYRLLRRWTTLRHDERELWWAKPRLSGSGTAMVVKVPAAGKSDETGWEAFVREWGVLKYLQEEGHVGGKAPLSVGLVGAFEAERSLVLSIPAGSRTLREVGQQINSEMEGKKKRISQG-VFNDQQVESLAAQTCRTVCWLHRCGIISGDVTPDNFVFLGVDGSNSGGLSDSRG 2300
P LQ+ Q +P P + P++A GR SC+KCDPR WYRG+F+GELGGLG G+ + + E G +WN T++DR YRLLR WTT DE ELWWAKPRL GSGTA+VVKV A GK D TGWEAF+REWGVL+YLQEEG V G+ PLSVGLV AFE ERSLVLSIPAGSRTLREVGQ ++SE KK RIS G VFND QVESLA Q CR V WLH G+ISGDVTPDNF+ L G +G S S G
Sbjct: 719 PAALQATQSSTEPSAASSPARDYHQRRPSTAGPYGGR----SCLKCDPRRWYRGEFMGELGGLGAGSPXXXXXXXXXEDDG---EGGRLWNKTVSDR-YRLLRPWTTSPLDEGELWWAKPRLCGSGTAVVVKVLADGKRDATGWEAFIREWGVLEYLQEEGRVSGREPLSVGLVCAFETERSLVLSIPAGSRTLREVGQHMHSERRSKKSRISDGGVFND-QVESLATQACRAVGWLHHHGLISGDVTPDNFILLSRGGGGTGRSSTSGG 979 The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig1005.151.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 2 ZOOMx 1POSITION0
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-lacustris_contig1005.151.1 >prot_P-lacustris_contig1005.151.1 ID=prot_P-lacustris_contig1005.151.1|Name=mRNA_P-lacustris_contig1005.151.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=248bp MKCDPRSWYRGKFVGELGGLGFGTERLGAQQGRRQREKGKEERGGMWNMTback to top mRNA from alignment at P-lacustris_contig1005:37707..41903- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-lacustris_contig1005.151.1 ID=mRNA_P-lacustris_contig1005.151.1|Name=mRNA_P-lacustris_contig1005.151.1|organism=Pleurocladia lacustris SAG_25_93|type=mRNA|length=4197bp|location=Sequence derived from alignment at P-lacustris_contig1005:37707..41903- (Pleurocladia lacustris SAG_25_93)back to top Coding sequence (CDS) from alignment at P-lacustris_contig1005:37707..41903- >mRNA_P-lacustris_contig1005.151.1 ID=mRNA_P-lacustris_contig1005.151.1|Name=mRNA_P-lacustris_contig1005.151.1|organism=Pleurocladia lacustris SAG_25_93|type=CDS|length=1488bp|location=Sequence derived from alignment at P-lacustris_contig1005:37707..41903- (Pleurocladia lacustris SAG_25_93)back to top |