mRNA_P-lacustris_contig1002.134.1 (mRNA) Pleurocladia lacustris SAG_25_93
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_P-lacustris_contig1002.134.1 vs. uniprot
Match: D8LLX5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLX5_ECTSI) HSP 1 Score: 1090 bits (2819), Expect = 0.000e+0 Identity = 618/829 (74.55%), Postives = 667/829 (80.46%), Query Frame = 1 Query: 772 VADPGNTPEIVVPASIRFSISALPSEPMQPRWGDERVGYFNTVFKDLGDHRATREGRNTDLLDRGIGAIGRRGVTLINRRRMAAPAAVGS--------DGDTPAASGA---EAAAAAGEPLTYYIDPSVPTEWREYIKAGVEAWRPAFEAAGLGPEAIRGVLPDDEAWPADYDAGDIRFNSITWAVDVQETFALGPATIDPRTGEILHSGIVFTNGWIKAWSASFEIYGTSPDAEPSARHRSLLSRSPHSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVLEKLLPSLGR--TRHGGSGSLRYHGRGECQEARMGDISMSLLPLVRERAREGRAHSGDGDSSRXXXXXXXXXXX--------GRGPAPGLATDKIIGAGLSDVVMHEVGHTLGLRHNFVGSTLLTLEELQDPAKTAEVGLTSSVMDYLPINIVSSKMRGSEEPHYFTPRIGEYDMWAIKYGYMVVEGEAEEYLTQHEASLPSREGAMDLKTLASEALPFATDEDAPGSSGMNPLVSVFDLGKEPMDYWEDKLELVTELWPVLLERSTAMGDAKFQRYGSTALSLLHQVLVSGLYSAKYIGGFDISKQRRIDDNTPGPIQLIPADRQRRALALILRVVTGDDPAGAASFLPGEEDLPNLAMRSGECQGLEQYCYGTVPVDVLSEVHAIRKSVLLHVFSFDHLMRLRLHSWAAGASASGSGDTLTVSEMFETTTNAVWGDGGFGSARAKLWQNWDLMLFWLEVLQASAAYGSAGTQSAVPGDVSAIAVGLVYSLIDSGKNLESTDPAYGLHRAATLRLGAWEERGSTDGFVLGQLGVLR 3195
V DP + V+P S+RFSIS LPSEPM+PRWGDERVGYFNTVF DLGDHRATREGRNTDL+D VTLIN+RRM DGD+PA A E AA GEPLTYY+DPSVP EWREY++AGVEAWRPAFEAAGLG EAIR VLP DEAWP+DYD GDIRFNSITWAVDV E FALGPATIDPRTGEILHSGIVFTNGWIK+WSASFEIYG SPD EPSAR RSLL+R P S XXXXXXXXXXXXXXXXXXXXXXXXXXXXX GVLEKLLPSLG RHGGSGSLRYHGRGECQEARM DISMSLLPLVRE XXXXXXXXXXX GRG APGLATD+I+GAGL DVVMHEVGHTLGLRHNF GSTLLTLEELQDP KTAEVGLTSSVMDYLP+N+VSSKM+GS PHYFTPR+GEYDMWAIKYGYM VEGEA+E L +HE DLK LAS+AL F+TDED G SGMNPL SVFDLG+EPMDYWEDKLELVTELWPVLL+RST G+A+FQRYG A+SLL QVL SGLYS KYIGGF ISKQRR++ +TPGPIQL+PADRQRRAL L+LRVVTGD+PAG A+FLPGEED NLA SG C GL QYCYG VPVDVLSEV+A+RKSVLL FS DH+MRLRLHSWA+GA G DTL+VSEMFE+ TNAVWGDGGFGSARAKLWQNWDLMLFWLEVLQA YGSAG +S VPGDV+A AVGLVYSL+D+GKNL S D AYGLHRAA L+ GAWEERG+TDGF+L QLG L+
Sbjct: 6 VGDPAD----VLPISVRFSISMLPSEPMEPRWGDERVGYFNTVFSDLGDHRATREGRNTDLIDTE--------VTLINKRRMTPXXXXXXXXXXXXXXDGDSPADEAAATPEPAAEGGEPLTYYVDPSVPPEWREYMRAGVEAWRPAFEAAGLGGEAIRAVLPGDEAWPSDYDPGDIRFNSITWAVDVDEVFALGPATIDPRTGEILHSGIVFTNGWIKSWSASFEIYGDSPDDEPSARRRSLLNRPPDSHSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXENERGEA--GVLEKLLPSLGGGGRRHGGSGSLRYHGRGECQEARMNDISMSLLPLVREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESGGRGTAPGLATDEILGAGLMDVVMHEVGHTLGLRHNFEGSTLLTLEELQDPTKTAEVGLTSSVMDYLPLNVVSSKMQGSAVPHYFTPRVGEYDMWAIKYGYMAVEGEADELLAEHE----------DLKALASQALAFSTDEDGSGYSGMNPLASVFDLGQEPMDYWEDKLELVTELWPVLLDRSTQQGEAQFQRYGHAAMSLLRQVLASGLYSTKYIGGFHISKQRRVESDTPGPIQLVPADRQRRALTLVLRVVTGDEPAGGAAFLPGEEDFSNLAGWSGSCAGLGQYCYGVVPVDVLSEVNALRKSVLLQAFSVDHIMRLRLHSWASGA---GGVDTLSVSEMFESATNAVWGDGGFGSARAKLWQNWDLMLFWLEVLQA---YGSAGVESVVPGDVTATAVGLVYSLMDTGKNLTSADAAYGLHRAAALKHGAWEERGNTDGFILWQLGGLK 804
BLAST of mRNA_P-lacustris_contig1002.134.1 vs. uniprot
Match: A0A4D9CV01_9STRA (Uncharacterized protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CV01_9STRA) HSP 1 Score: 484 bits (1246), Expect = 5.660e-151 Identity = 338/921 (36.70%), Postives = 483/921 (52.44%), Query Frame = 1 Query: 361 PPTKVLFGASYARGSYNDQGATTLLHYPAENTENTVFSFRLTEDATGVDVLREQLTLRTSDEGMENSLSGSAPPEWITTLPVL-------QSDEVSVIASAENLLINGFYVTAIKPTLVAGLRLKLSETRAFPKNAGLTVEYQLVADPGNTPEIVVPASIRFSISALPSEPMQPRWGDERVGYFNTVFKDLGDHRATREGRNTDLLDRGIGAIGRRGVTLINRRRMAAPAAVGSDGDTPAASGAEAAAAAGEPLTYYIDPSVPTEWREYIKAGVEAWRPAFEAAGLGPEAIRGVLPDDEAWPADYDAGDIRFNSITWAVDVQETFALGPATIDPRTGEILHSGIVFTNGWIKAWSASFEIYGTSPDAEPSARHRSLLSRSPHSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVLEKLLPSLGRT-RHGGSGSLRYHGRGECQEARMG-DISMSLLPLVRERAREGRAHSGDGDSSRXXXXXXXXXXXGRGPAPGLATDKIIGAGLSDVVMHEVGHTLGLRHNFVGSTLLTLEELQDPAKTAEVGLTSSVMDYLPINIVSSKMRGSEEPHYFTPRIGEYDMWAIKYGYMVVEGEAEEYLTQHEASLPSREGAMDLKTLASEALPFATDEDAPGSSGMNPLVSVFDLGKEPMDYWEDKLELVTELWPVLLERSTAMGDAKFQRYGSTALSLLHQVLVSGLYSAKYIGGFDISKQRRIDDNTPG-----PIQLIPADRQRRALALILRVVTGDDPAGAASFLPGEEDLPNLAMRSGECQGLEQYCYGTVPVDVLSEVHAIRKSVLLHVFSFDHLMRLRLHSWAAGASASGSGDTLTVSEMFETTTNAVWGDGGFGSARAKLWQNWDLMLFWLEVLQASAAYGSAGTQSAVPGDVS----AIAVGLVYSLIDS 3069
P V+F A++ARG+++D + LLH PAE T++ VF+F +T D +G+DV REQ +RTS + A + TLP++ +E S + A L+ NGFY+T + A LRL LS R+FP+N +T EY L DP + V +I FS++ LP +P+ R DER+G+F+ ++D+GDHR N + + V +INRRR+++ A +TYYIDP+VP +WRE + GVEAWRPAF+AAG GP AIR +LP++ WP DY GD+R+++I+W VD+ TFALGP+ +DPR+GEIL S I+FT+GW+K W + E+ +S + SA L + + XXXXXXXXXXXX ++ PS T RH H G CQEAR D+S L L RE A + L +D I+ AG+ +V+MHEVGHTLGLRHNF S+ +T E+ QD T + GL++SVMDYLP+N+VS + YF+ IG YD+ AIKYGY + EA +P + L LA + L F TDED G +P V+VFD +P ++ D+L LV EL LL+R GD +F RY + +LL VL + K+IGG+ +++ RR PG P+ ++ Q+RALA +L+V+T D+ + P E + + + GEC GL QYC P+DV+ + R S+L H+F+ L RLR W AS + V+++F TT A++G SARA +NW+L ++W+E L A SA P D+S A+A ++S+ +S
Sbjct: 110 PSRPVIFSATFARGAWDDSSSLLLLHEPAEATDHVVFTFNITSDGSGIDVFREQYGVRTSSPDYAMPVELGALSLRVGTLPIVIDHHGSSDDEEGSYVVDASGLIENGFYITDVTGAEDARLRLDLS--RSFPENLDITAEYLLPLDPSDPASPKVSETISFSMALLPDKPLVARALDERIGFFSIGYQDVGDHR---HDPNVTASHKHLADRVDTKVKIINRRRLSSSANESV-------------------ITYYIDPTVPKQWRESFRQGVEAWRPAFQAAGFGPAAIRAILPNETGWPDDYQVGDLRYSTISWVVDMDTTFALGPSVVDPRSGEILKSDIIFTHGWVKHWISYMEMMDSSKNPAQSATGLDALDPAREAADLQRLLGVDHGGQREHSHXXXXXXXXXXXXDPVTTLAGR-PWTRMHPSRRTTLRHA-------HRHGRCQEARAKYDLSPKLALLARELAGK----------------------------DALVSDDILHAGIREVIMHEVGHTLGLRHNFKASSGVTWEQTQDVEYTQKHGLSTSVMDYLPMNLVSGRA-AETNVDYFSSTIGIYDVAAIKYGYTELPDEA--------PGMPHKV----LTALADQNLLFGTDEDDASPLGADPYVNVFDFTSDPAAFYLDRLTLVAELRENLLDRVVLEGD-EFTRYAAAETTLLKVVLSAAKSLTKFIGGYTVNRARRA---APGVAQAPPLAVLSPSEQQRALAGVLQVLTDDE----SIIFPQAEAVQWMLNKGGECSGLYQYCLARSPMDVVKAIDDGRISLLTHLFAIPRLERLRTAEWVTSASGEAE-KSFGVADLFTQTTLALYGAEPGDSARAAESRNWNLQIYWVERLLELA--------SAPPEDLSREVAALAAAQLFSIQES 940
BLAST of mRNA_P-lacustris_contig1002.134.1 vs. uniprot
Match: A0A6H5J8L5_9PHAE (DUF5117 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8L5_9PHAE) HSP 1 Score: 384 bits (986), Expect = 2.410e-121 Identity = 241/330 (73.03%), Postives = 255/330 (77.27%), Query Frame = 1 Query: 772 VADPGNTPEIVVPASIRFSISALPSEPMQPRWGDERVGYFNTVFKDLGDHRATREGRNTDLLDRGIGAIGRRGVTLINRRRMAAPAAVGS-----------DGDTPAASGA----EAAAAAGEPLTYYIDPSVPTEWREYIKAGVEAWRPAFEAAGLGPEAIRGVLPDDEAWPADYDAGDIRFNSITWAVDVQETFALGPATIDPRTGEILHSGIVFTNGWIKAWSASFEIYGTSPDAEPSARHRSLLSRSPHSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVLEKLLPSLGR--TRHGGSGSLRYHGRGECQEARM 1710
V DP + V+P S+RFSIS LPSEPMQPRWGDERVGYFNTVF DLGDHRATREGRNTDL+D V LIN+RR DGD+PA A E AA +GEPLTYY+DPSVP EWREY++AGVEAWRPAFEAAGLG EAIR VLP DEAWP+DYD GDIRFNSITWAVDV E FALGPATIDPRTGEILHSGIVFTNGWIK+WSASFEIYG SPD EPSARHRSLL+R P S XXXXXXXXXXXXXXXXXXXXXXXXXXXXX GVLEKLLPSLG RHGGSGSLRYHGRGECQEAR+
Sbjct: 6 VGDPAD----VLPISVRFSISMLPSEPMQPRWGDERVGYFNTVFSDLGDHRATREGRNTDLIDTE--------VILINKRRXXXXXXXXXXXXXXXXXXXXDGDSPADEAAAATPEPAAESGEPLTYYVDPSVPPEWREYMRAGVEAWRPAFEAAGLGGEAIRAVLPGDEAWPSDYDPGDIRFNSITWAVDVDEVFALGPATIDPRTGEILHSGIVFTNGWIKSWSASFEIYGDSPDDEPSARHRSLLNRPPDSHAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDNERGEG--GVLEKLLPSLGGGGRRHGGSGSLRYHGRGECQEARV 321
BLAST of mRNA_P-lacustris_contig1002.134.1 vs. uniprot
Match: A0A7R9YFV1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YFV1_9STRA) HSP 1 Score: 373 bits (957), Expect = 2.390e-110 Identity = 310/922 (33.62%), Postives = 428/922 (46.42%), Query Frame = 1 Query: 88 VCGRAKRLC---CSRWVEAVLTLWGLAVLLTLMGVKSGV-NRFHAAA---PAQGLD---LAELAPTLEPFATELFTLYTTNLTAELLLIDF---SLSVVAAGDEPPTKVLFGASYARGSYNDQG--ATTLLHYPAENTENTVFSFRLTEDATGVDVLREQLTLRTSDEGMENSLSGSAPPEWITTLPVL----QSDEVSVIASAENLLINGFYVTAIKPTLVAGLRLKLSETRAFPKNAGLTVEYQLVADPGNTPEIVVPASIRFSISALPS--EPMQPRWGDERVGYFNTVFKDLGDHRA-TREGRNTDLLDRGIGAIGRRGVTLINRRRMAAPAAVGSDGDTPAASGAEAAAAAGEPLTYYIDPSVPTEWREYIKAGVEAWRPAFEAAGL------GPEAIRGVLPDDEAWPADYDAGDIRFNSITWAVDVQETFALGPATIDPRTGEILHSGIVFTNGWIKAWSASFE----------IYGTSPDAEPSARHRSLLSRSPHSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVLEKLLPSLGRTRHGGSGSLRYHG-RGECQEARMGDISMSLLPLVRERAREGRAHSGDGDSSRXXXXXXXXXXXGRGPAPGLATDKIIGAGLSDVVMHEVGHTLGLRHNFVGSTLLTLEELQDPAKTAEVGLTSSVMDYLPINIVSSKMRGSEEPH--YFTPRIGEYDMWAIKYGYMVVEGEAEEYLTQHEASLPSREGAMDLKTLASEALPFATDEDAPGSSGMNPLVSVFDLGKEPMDYWEDKLELVTELWPVLLERSTAMGDAKFQRYGSTALSLLHQV----LVSGLYSAKYIGGFDISKQRRIDDNT---PGPIQLIPADRQRRALALILRVVTGDDPAGAASFLPGEEDLPNLAMRSGECQGL-EQYCYG 2706
V GRA+RL C + AV L L V+ +L+G G+ R P LD + +P +L + T+ LLL++ L ++P LF A + GS+ D A+ LLH PAENTE+T+F+F+L+ D VDV+R +R+ E ++ SA P ++T+LP+L + A L+++GFY+T + L+ + L ++P+NA VEY P P+ + S+ FS++ L S E R D+RVGYF T F +GD R +G +D +DR V +INRR M PL Y+IDPSVP +WR + GVEAW AF+ G +A+R + P D +P DY AGD RF+SI+WAVD+ ET+ALGPAT+DPR G+I+ S IVFTNGW+KAW + E G P SAR R+ +R S EKL GR RH + HG +G C EA + + MS+L + R D + +++ AGL+DVVMHEVGHTLGLRHNF GS T E+L+D E GLTSSVMDYLP+N S P FTP IGEYDMWAIK+GY E + +H PFATDED P S+GM+ SVFDL +P+ Y+ED+L+ L +R G+ Y + +LL +V L S Y AK IGG+ I K R+ D T P P++ Q RAL+ IL V+ G + + ++ + D+ +A+ +C + E YCYG
Sbjct: 56 VSGRARRLKLDQCLQGCAAVALLVCLIVISSLLGESIGILKRIEEQTKYLPRSALDENVAFVVQSAQDPVGDQLSFVLTSPADDALLLMEIPVLDLEQPLEAEQP--LYLFSAIFDYGSFFDGANQASALLHMPAENTEDTLFAFQLSPDKAFVDVVRVPTNVRSGTLWSEAAVEMSAWPGYVTSLPILDIGLRDGTFLATVEATELVLHGFYITDVDAELLYAYHVDLGRVMSYPRNANCVVEYVFAETP-YYPQYAL--SLFFSVTRLESSAELAPARLWDKRVGYFTTGFYQIGDLRTGDDQGHASDHIDRS--------VQIINRRDMR------------------------RPLIYHIDPSVPPQWRAALCRGVEAWNVAFDQVAAVKDALGGKKAVRCLTPSDAEFPEDYSAGDSRFSSISWAVDLDETYALGPATVDPRNGKIVSSNIVFTNGWLKAWLETIEQETGVSSGRRTQGVEPRLS-SARSRAEQARRLVSRNASNPSSRKPAADPRGTP----------------------FFEKLQARHGR-RH------QLHGLQGGCAEA-LSEHRMSVLDHFHHSTGQRRLQDDGSDPFQ----------------------QVLEAGLTDVVMHEVGHTLGLRHNFKGSAQRTKEQLKDKDHVHEHGLTSSVMDYLPLNFWSEDFTEPFPPDAPLFTPVIGEYDMWAIKFGYENDSQYQEVFEAEH---------------------PFATDEDEPRSAGMDIETSVFDLSSDPIAYYEDQLKFARLLKADAAQRGVLAGE-----YHTRIEALLKKVQRTMLSSCAYMAKAIGGYVIGKTRKAQDQTNGAPTPVRRTEQSTQDRALSNILDVLLGAEDSDQTAYSGSDTDVA-VAVEPNDCPNVVEGYCYG 860
BLAST of mRNA_P-lacustris_contig1002.134.1 vs. uniprot
Match: A0A835ZFA7_9STRA (DUF4953 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFA7_9STRA) HSP 1 Score: 329 bits (843), Expect = 3.200e-99 Identity = 189/432 (43.75%), Postives = 266/432 (61.57%), Query Frame = 1 Query: 1897 MHEVGHTLGLRHNFVGSTLLTLEELQDPAKTAEVGLTSSVMDYLPINIVSSKMRGSE-------EPHYFTPRIGEYDMWAIKYGYMVVEGEAEEYLTQHEASLPSR--EGAMDLKTLASEALPFATDEDAPGSSGMNPLVSVFDLGKEPMDYWEDKLELVTELWPVLLERSTAMGDAKFQRYGSTALSLLHQVLVSGLYSAKYIGGFDISKQRRIDDNTPGPIQLIPADRQRRALALILRVVTGDDPAGAAS------FLPGEEDLPNLAMRSGECQGLEQYCYGTVPVDVLSEVHAIRKSVLLHVFSFDHLMRLRLHSWAAGASASGSGDTLTVSEMFETTTNAVWGDGGFGSARAKLWQNWDLMLFWLEVLQASA-AYGSAGTQSAVPGDVSAIAVGLVYSLIDSGKNLESTDPAYGLHRAATLRLGAWE 3144
MHEVGHTLGLRHNF GST TL +LQ P T++ GLT+SVMDYLPINIVS+K+R + + +YFTP +G YDMWAI+YGYM V +Q +A P+ + DL+T F+TDED + G++P VSVFDL +P+ ++ D+L++V E+ P LL+R+ +G+ F RY + LL + VSGLY+AKYIGG +SKQRRI NT P + A +QR ALAL+++++TG + G+A+ FLP LP + G C+G+E+YC T P DVL+++ +R+ +LL+V S D L +RL+SW S++ T+ E+F T T+A+WG G S RA +NW +MLFW ++L A A A S+G GD++A A G Y + S L+ + PA+GL + RL WE
Sbjct: 1 MHEVGHTLGLRHNFRGSTGPTLAQLQSPKYTSKFGLTTSVMDYLPINIVSAKLRAAAGVGPIGPDHNYFTPVLGSYDMWAIEYGYMDV--------SQADAVAPATMFDQHPDLET-------FSTDEDRSRNDGIDPFVSVFDLSSDPLAFFADRLDVVAEIRPKLLDRAVQLGEP-FTRYSDSEKMLLQLIKVSGLYAAKYIGGMQLSKQRRIATNTQAPATPVSAAQQREALALLVKILTGVEAVGSAANSTSVDFLPEPTALPLMVQTGGVCEGIERYCLATEPYDVLTDLQTVREMILLNVLSLDRLDMVRLNSWGKQGSSA-----FTIRELFTTLTDAIWGGGLIASTRAASPENWAIMLFWGDLLMAIAVAIPSSG------GDIAAAAAGEAYRIAASAPALDPSAPAWGLSKEFQRRLSTWE 405
BLAST of mRNA_P-lacustris_contig1002.134.1 vs. uniprot
Match: A0A7S3G7R3_9EUKA (Hypothetical protein n=1 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3G7R3_9EUKA) HSP 1 Score: 299 bits (766), Expect = 1.510e-83 Identity = 241/866 (27.83%), Postives = 388/866 (44.80%), Query Frame = 1 Query: 382 GASYARGSYNDQGATTLLHYPAENTENTVFSFRLTEDATGVDVLREQLTLRTSDEGMENSLSGSAP-PEWITTLPVLQSD-EVSVIASAENLLINGFYVTAIKPTLVAGLRLKLSETRAFPKNAGLTVEYQLVADPGNTPEIVVPASIRFSISALPSEPMQPRWGDERVGYFNTVFKDLGDHRATREGRNTDLLDRGIGAIGRRGVTLINRRRMAAPAAVGSDGDTPAASGAEAAAAAGEPLTYYIDPSVPTEWREYIKAGVEAWRPAFEAAGLGPEAIRGVLPDDEAWPADYDAGDIRFNSITWAVDVQETFALGPATIDPRTGEILHSGIVFTNGWIKAWSASFEIYGTSPDAEPSARHRSLLSRSPHSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVLEKLLPSLGRTRHGGSGSLRYHGRGECQEARMGDISMSLLPLVRERAREGRAHSGDGDSSRXXXXXXXXXXXGRGPAPGLATDKIIGAGLSDVVMHEVGHTLGLRHNFVGSTLLTLEELQDPAKTAEVGLTSSVMDYLPINIVSSKMRGSEEPHYFTPRIGEYDMWAIKYGYMVVEGEAEEYLTQHEASLPSREGAMDLKTLASEALPFATDEDAPG--SSGMNPLVSVFDLGKEPMDYWEDKLELVTELWPVLLERSTAMGDAKFQRYGSTALSLLHQVLVS-----GLYSAKYIGGFDISKQRRIDDNTPGPIQLIPADRQRRALALILRVVTGDDPAGAASFLPGEEDLPNLAMRSGECQGLEQYCYGTVPVDVLSEVHAIRKSVLLHVFSFDHLMRLRLHSWAAGASASGS--GDTLTV---SEMFETTTNAVWGDGGFGSARAKLWQN 2937
G + S +G + Y T+ VF F +++ + ++ LTLR + + +L + P W+ + VL + + S+ + I G+ + + VAG ++ A+P N G +EY + I ++I LP PM R D+RVGYF F+ LG + R+ D+ + ++INR R+ + D +P+TY+IDPSVP +WR +K GVEAW AFEA G A+R +LP D +P DYDAGDIR++SI+W + T+A+GP+T+DPR+GEI+++ I+FT GW+KA A ++Y D E + + ++ K+L + ++ M+ +R +E HS + +P + D I L DV MHEVGHTLGLRHNF GST + +L+DP K ++ SVMDYLP+N+ + GSE+ +Y+ I EYD WAIKYGY +++ +E + A+L + A FATDED PG SS +P V+ FDL +P+ Y+ +++E++ E+ ++ RS +G + T L + +V S +Y K+IGG +I+K R + P++ + ++ RA+ ++ ++ D LP E +P L RSG C GL YC G + + I S++ + F+ + RL ++W S S + D + E+FE ++V +G ++W +
Sbjct: 70 GKPFITSSLASEGNARYVLYHMPITDGEVFEFEVSDQGDQIHLVYPDLTLRANPGSEDEALLRTGDFPGWVDSFSVLANRYDAQGNVSSYLIDITGWVMGGMSQVWVAGSG-EIKAVHAYPTNLGFEIEYN---------SMFGAFGIYWAIGKLPETPMVSRENDDRVGYFTETFELLGPDAQSNNPRD-DVKHFDVSH------SIINRWRLEKADKTAAVSDPV------------KPITYHIDPSVPAKWRNALKEGVEAWNSAFEAVGFS-NAVRALLPGDADFPEDYDAGDIRYSSISWTPSLYSTYAVGPSTVDPRSGEIINADIMFTEGWVKA--AMSDVY--FDDIEVVRQKETEMA----------------------------------------------AFAKVLKT--------------------------NLKMNRTAKMRLEPKE---HSFYLQKAEDIALARAMMDLSSTASP-IPIDDYISGMLKDVTMHEVGHTLGLRHNFKGSTARSSADLKDPTKQ----ISCSVMDYLPVNVA---LNGSEQGNYYMTDIAEYDKWAIKYGYTILD---DEVVGVKHATLDQIASESENPNHA-----FATDEDGPGTSSSAEDPFVNYFDLNSDPVVYFSEQIEMMNEMMNGIVNRSVDIGSSW------TGLDNMMRVYHSRMQRAAIYLFKFIGGRNINKLHRGEAGGKVPVEPVSKEQTERAVNAVISLLKSD------KLLPRRELMPFLVSRSGWCSGLHTYCDGLTTDEPIYVFEYIASSLVSYAFAAAKIDRLNTNAWLNKDSISNAYTKDNMFAHFHDELFEQVVSSVPEEGSHLRVLPRVWMS 798
BLAST of mRNA_P-lacustris_contig1002.134.1 vs. uniprot
Match: A0A0G4EX05_VITBC (DUF4953 domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4EX05_VITBC) HSP 1 Score: 296 bits (759), Expect = 1.390e-80 Identity = 277/980 (28.27%), Postives = 414/980 (42.24%), Query Frame = 1 Query: 256 LEPFATELFTLYTTNLTAELLLIDFSLSVVAAGDEPPTKVLFGASYARGSYNDQGATTLLHYPAENTENTVFSFRLTEDATGVDVLREQLTLRTSDEGMENSLSGSAPPEWITTLPVLQSDEVS-----------------------------VIASAENLLINGFYVTAIKPTLVAGLRLKLSETRAFPKNAGLTVEYQLVADPGNTPEIVVPASIRFSISALPSEPMQPRWGDERVGYFNTVFKDLGDHRATREG------------------------------------RNTDLLDRGIGAIGRRGVTLINRRRMAAPAAVGSDGDTPAASGAEAAAAAGEPLTYYIDPSVPTEWREYIKAGVEAWRPAFEAAGLGPEAIRGVLPDDEAWPADYDAGDIRFNSITWAVDVQETFALGPATIDPRTGEILHSGIVFTNGWIKAWSASFE-----IYGTSPDAEPSARHRSLLSRSPHSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGV--LEKLLPSLGR-----TRHGGSGSLR--YHGRGECQEAR--MGDISMSLLPLVRERAREGRAHS-GDGDSSRXXXXXXXXXXXGRGPAPGLAT--DKIIGAGLSDVVMHEVGHTLGLRHNFVGSTLLTLEELQDPAKTAEVGLTSSVMDYLPINIVSSKMRGSEEPHYFTPRIGEYDMWAIKYGYMVVEGEAEEYLTQHEASLPSREGAMDLKTLASEALPFATDEDAPGSSGMNPLVSVFDLGKEPMDYWEDKLELVTELWPVLLERSTAMGDAKFQRYGSTALSLLHQVLVSGLYSAKYIGGFDISKQRRIDDNTPGPIQL-----------------IPADRQRRALALILRVVTG----DDPAG--------------AASFLPGEEDLPNLAMRSGECQGLEQYCYGTVPVDVLSEVHAIRKSVLLHVFSFDHLMRLRLHSWAAGASASGS 2838
L P+ T TLY A LL+ F L + +P +VL + +ARG Y+ HYPA + V FRLT D T V+V R L +RTSD ++ + W+ LP+L + V+ A L NGF+ +++KP V G+++ +++TRA+ N TV + L+ + N P SI +++S LP + R D+RVGYF + + D+G HR EG R + + + R VT+I RRR+ PA S + PL Y+IDPSVP WR + GVE W AF+ G P + TW V P+ IDPR+GEIL S I FT GWIK++ FE IY + + + S++ S G + +P L R G +L+ YH + +E+R + S ++ +VR+ A A D + + G G G + ++I+ AGL DVV HEVGHTLGLRHNF ST + E+L + + GL SSVMDY +N+ + +++ YF+P IG+YD AI++GY +E E H +S L L+SE + FATDED P +SG +P +V DL P+ ++ ++LE V + VLLE S G+ R +++L +V+ +G+Y +K++GG ++K D P P Q + +RQ+ AL I ++TG DD G +S P E + L R G C G ++C G P+D+L+ + +++K +LL +F L+RLR SW + SGS
Sbjct: 84 LRPYKTAFATLYLDPRRAHRLLLQFPLPFLK---DPTAQVLVTSVFARGPYS--------HYPASYGSDIVLEFRLTADDTAVEVRRVPLEMRTSDPQSVYTVKKALWTGWLVDLPILARGQPYGPHTXXXXXXXXXXXXXXGAPQPYAKADVVLVDAWGLTANGFFQSSVKPREVVGVKVDMNDTRAYHINFATTVHH-LMQERDNR----YPLSITYTVSLLPYPLLPGRVADDRVGYFTSTYYDVGYHRPMWEGMSEANSNNSNTRWAGCWYGHGEGYYEYATSNNATSSRINCVRTKRLSEYVDREVTVIQRRRL-----------LPADSQRNVS----YPLLYFIDPSVPVRWRPAMCRGVEKWNQAFKLLGYDPHYQ---------------------SRRTWRRTVAGRLQC-PSVIDPRSGEILKSDIFFTEGWIKSFINQFERRYPQIYTQEEEGDDRQQSSSIVEHFISSMPNADSDALRGLLSNAQLTDRELIEGFLRAHSNTENTDARGTRYTKHAVPGLHERMAHEARDGSFVALKLMYHQHMKDEESRRQLQRKSGNVTNVVRDAATSSHAWMPNDQRTLQGGNSTTDDGVDGAGWPSGSWSWYERILEAGLEDVVTHEVGHTLGLRHNFKASTTIPWEQLTNATYICKHGLGSSVMDYTAVNMAAGV---ADDALYFSPTIGDYDKLAIRFGYRRLEDEVSG--VPHPSS---------LSLLSSEPMAFATDEDDPDASGTDPYNNVRDLSN-PLQFYLNELEYVKNIRSVLLESSVLPGE-DMSRLAEAEMTILGRVMTAGMYLSKFLGGVVLTK-----DPKPTPTQANEMMAEATAAMAPPALAVDGNRQQEALEAITEILTGVPARDDRRGKGSRGKRKSGVDGRGSSLYPSPESVQYLVRRVGVCSGPTRFCMGREPLDILASIDSLQKLLLLFIFLPRRLVRLRTLSWLSADYGSGS 989
BLAST of mRNA_P-lacustris_contig1002.134.1 vs. uniprot
Match: A0A2E5FHL5_9BACT (Uncharacterized protein n=2 Tax=bacterium TaxID=1869227 RepID=A0A2E5FHL5_9BACT) HSP 1 Score: 282 bits (722), Expect = 2.300e-77 Identity = 256/949 (26.98%), Postives = 411/949 (43.31%), Query Frame = 1 Query: 328 FSLSVVAAGDEPPTKVLFGASYARGSYNDQGATTLLHYPAENTENTVFSFRLTEDATGVDVLREQLTLRTSDEGM---ENSLSGSAPPEWITTLPVLQSDEVSVIASAENLLINGFYVTAIKPTLVAGLRLK---------LSETRAFPKNAGLTVEYQLVADPGNTPEIVVPASIRFSISALPSEPMQPRWGDERVGYFNTVFKDLGDHRATREGRNTDLLDRGIGAIGRRGVTLINRRRMAAPAAVGSDGDTPAASGAEAAAAAGEPLTYYIDPSVPTEWREYIKAGVEAWRPAFEAAGLGPEAIRGVLPDDEAWPADYDAGDIRFNSITWAVDVQETFALGPATIDPRTGEILHSGIVFTNGWIKAWSASFEIYGTSPDAEPSARHRSLLSRSPHSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVLEKLLPSLGRTRHGGSGSLRYHGRGECQEARMGDISMSLLPLVRERAREGRAHSGDGDSSRXXXXXXXXXXXGRGPAPGLATDKIIGAGLSDVVMHEVGHTLGLRHNFVGSTLLTLEELQDPAKTAEVGLTSSVMDYLPINIVSSKMRGSEEPHYFTPRIGEYDMWAIKYGYMVVEGEAEEYLTQHEASLPSREGAMDLKTLASEALP----FATDEDAPGSSGMNPLVSVFDLGKEPMDYWEDKLELVTELWPVLLERSTAMGDAKFQRYGSTALSLLHQVLVSGLYSAKYIGGFDISKQRRIDDNTPGPIQLIPADRQRRALALILRVVTGDDPAGAASFLPGEEDLPNLAMRSGECQGLEQYCY-GTVPVDVLSEVHAIRKSVLLHVFSFDHLMRLRLHSWAAGASASGSGDTLTVSEMFETTTNAVWG---DGGFGSARAKLWQNWDLMLFWLEVLQASAAYGSAGTQSAVPGDVSAIAVGLVYSLIDSGKNL-ESTDPAYGLH 3111
F L V A+ P + S+A +LLH P+ + F FR+ D +D++ + R EG N+L S + +PV ++ Y+ + + +GL ++ + +P N +E+ ++ + G++ E + FS+ LP + M R D+R+GYF+T + D+ N + D G+ V L N+ R+ + P A E +P+TYY+DP+V +WREY+K G+E W +FEAAG A++ VLP DE WP DY AGD R++S++WA + TFA+GP+ +DPRTGEIL++ IVFT WIKAW+ DAE +A L PH E++L +G+ +G G+ E + ++L V G + G A I L +V MHEVGHT+GLRHNF S + EE+ + T++ GL SSVMDY N+ S + + HY +P G+YD WA++YGY + E QHE LK LAS+ FATD+D+ + G +P + +DL +P+ ++ED+++L L + +R + G+ G + +L+ + G ++AKY+GG D+S+ + D P PI I Q RAL L++ +T D A F P + S GL + + D+ S V + + L+++F L+R+R +W A+ GD+L++S++F A+W F LW ++ + + G++G D+ A++ + + +S N+ E +DP H
Sbjct: 72 FMLEVPASELNHPMVAIMLTSHA------DAQRSLLHMPSGDMS---FEFRMNPDGRRIDIVEPNWSHRWDPEGKLANANALGVSDGTRMMAMMPVATREKDGETTH---------YLLDVSDWINSGLGYMRGFNRDLSYVNRSDVYPTN----MEFDIIFNMGSSEE-----GVHFSVQRLPDDLMTTRTSDQRIGYFDTQYYDMDV--------NPEQTDGGV-------VRLANKWRL--------EPKDPDAEMLEPI----KPITYYVDPTVSEDWREYVKIGIEKWNKSFEAAGW-KGAVKAVLPGDEDWPDDYSAGDSRYSSVSWAPSLASTFAIGPSNVDPRTGEILNADIVFTASWIKAWTG---------DAEVTAHP---LFNLPH-------------------------------------------YEEIL-EIGKEGKFKEFEASLYGYGDLPEGFDMERYCAMLSPV------------SGGNFSPIVLRNALIADGVIGADDPIPHSFITEALIEVTMHEVGHTIGLRHNFKSSHGIPWEEINNKEYTSKHGLISSVMDYAESNVSSDR---DNQGHYSSPVTGDYDDWAVQYGYKYLPDEISG--VQHEW----------LKELASDNTHPHHHFATDQDSATAFGWDPYTNYWDLS-DPLSFFEDRIKLAKSLISEIEDRVVSEGEEWTDLRGGVS-QILYDMSRGGPFAAKYLGGHDMSRAHKGDPGAPAPISFISYSEQERALDLLIESLTVDT-AMLVDFYP-------YMVNSFRAYGLGGRSFMQDLNTDIHSTVASRKMMTLMYLFDSSRLVRMRDAAWYHEANG---GDSLSISDVFAAVHEALWNVDAANSFNRDSQSLWTSYLIQM------------GNSGP------DMLALSTDALIDMYESATNMSEDSDPMVAAH 851
BLAST of mRNA_P-lacustris_contig1002.134.1 vs. uniprot
Match: A0A1X6P1S5_PORUM (Uncharacterized protein n=2 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P1S5_PORUM) HSP 1 Score: 281 bits (720), Expect = 5.330e-76 Identity = 235/815 (28.83%), Postives = 349/815 (42.82%), Query Frame = 1 Query: 430 LLHYPAENTENTVFSFRLTEDA-TGVDVLREQLTLRTSDE--GMENSLSGSAPPEWITTLPVLQS-DEVSVIASAENLLINGFYVTAIK-----PTLVAGLRLKLSETRAFPKNAGLTVEYQL-----VADPGNTPEIVVPASIRFSISALPSEPMQPRWGDERVGYFNTVFKDLGDHRATREGRNTDLLDRGIGAIGRRGVTLINRRRMAAPAAVGSDGDTPAASGAEAAAAAGEPLTYYIDPSVPTEWREYIKAGVEAWRPAFEAAGLGPEAIRGVLPDDEAWPADYDAGDIRFNSITWAVDVQETFALGPATIDPRTGEILHSGIVFTNGWIKAWSASFEIYGTSPDAEPSARHRSLLSRSPHSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVLEKLLPSLGRTRHGGSGSLRYHGRGECQEARMGDISMSLLPLVRERAREGRAHSGDGDSSRXXXXXXXXXXXGRGPAPGLATDKIIGAG--------LSDVVMHEVGHTLGLRHNFVGSTLLTLEELQDPAKTAEVGLTSSVMDYLPINIVSSKMRGSEEPHYFTPRIGEYDMWAIKYGYMVVEGEAEEYLTQHEASLPSREGAMDLKTLASEALPFATDEDAPGSSGMNPLVSVFDLGKEPMDYWEDKLELVTELWPVLLERSTAMGDAKFQRYGSTALSLLHQVLVSGLYSAKYIGGFDISKQRRI--DDNTPGP-IQLIPADRQRRALALILRVVTGDDPAGAASFLPGEEDLPNLAMRSGE-CQGLEQYCYGTVPVDVLSEVHAIRKSVLLHVFSFDHLMRL 2796
L H PAE ++ F+FR ++ +D+ R + LR +D M S P W+ T VL + + A + + +G +V P + AFP+N L V+ + + + +PE + + +S+ ALP EPM R DER+G+F + + RA + R TL+ R + P+ Y++DP+VPT WR+ +K GVE W AF+AAG P+A+R +LPDD+ WP DY AGD+R+NSI+WA + T+ALGP+ +DPRTGE+L++ IVFT+GW++AW + + A S S P + PS R R R R R+ D+ + +L L R RE A G + A L T + +G L +VVMHEVGHTLGLRHNF S + L D E GL+SSVMDY+P+ + + +++ HY+T IG YD AIKYGY ++ T+ E S + + A + L FATD D G +PL S++D+ P+DY E+ L+L ++ L+ + A A + + S+ S + S Y+ K++GG S+ D PG + L P D +A AL L + D +G P + R G C+ + C G DV + +R VL + D L RL
Sbjct: 210 LTHMPAETVDHNAFAFRKSDAIFAAIDLYRPMMDLRVADNTSAMAQSYKEGTWPGWLKTFGVLHNVTSDGYLFDATDWVEDGMFVIESDSGDPDPKHKVSYGARFLNATAFPRNVELDVQMRARSVTALGESLLSPENIFSFIVHYSVVALPEEPMTVRMADERLGFFGQTYVSVDADRALHDKR-----------------TLLQRWDLTKRL----------------------PVVYHVDPTVPTAWRQAMKEGVEEWNKAFKAAGH-PDAVRAILPDDDKWPEDYAAGDVRYNSISWAPSLGSTYALGPSDVDPRTGEVLNADIVFTHGWVRAWLRDYREFVGDTGA------LSRFSAPP-----------------------------------------------VAPSTARGRALKRAEERLATRSFVDGERVDDLGVQML-LATHRLREWEA----GAAVARAATLNTSTAAATSDAIDLGTSSRVMSGADAYIIEALKEVVMHEVGHTLGLRHNFRASGNIPWASLSDAKYVEEHGLSSSVMDYMPVLVRADP---ADQTHYYTNTIGAYDYAAIKYGYG-------DFKTEAELSAFAEKAATEY------GLTFATDSDGADPDGPDPLASLWDMSATPLDYHENVLQLTRKVATRLMNATAADDTASWLDFTSSMESAIRVTARSVRYATKFVGGQLPSRAHSSGKDGIKPGASVPLRPVDGATQAKALSLILAELDPRSGMLGTTTAATYGPYMVHRVGSYCEVASKGCLGFASSDVPQLLRELRGKVLGSLLHPDRLNRL 910
BLAST of mRNA_P-lacustris_contig1002.134.1 vs. uniprot
Match: R1F418_EMIHU (Uncharacterized protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1F418_EMIHU) HSP 1 Score: 267 bits (683), Expect = 6.820e-71 Identity = 274/899 (30.48%), Postives = 393/899 (43.72%), Query Frame = 1 Query: 418 GATTLLHYPAENTENTVFSFRLTEDATG-VDVLREQLTLRTSDEGM--ENSLSGSAPPEWITTLP--------------VLQSDEVSVIASA---------------------ENLLINGF-YVTAIKPTLVAGLRL-------KLSETRAFPKNAGLTVEYQLVADPGNTPEIVVPASIRFSISALPSEPMQ----PRWGDERVGYFNTVFKDLGDHRATREGRNTDLLDRGIGAIGRRGVTLINRRRMAAPAAVGSDGDTPAASGAEAAA---AAGEPLTYYIDPSVPTEWREYIKAGVEAWRPAFEAAGLGPEAIRGVLPDDEAWPADYDAGDIRFNSITWAVDVQETFALGPATIDPRTGEILHSGIVFTNGWIKAWSASFEIYGTSP------------------DAEPSARHRSLLSRSPHSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVLEKLLPSLGRTRHGGSGSLRYHGRGECQEARMGDISMSLLPLVRERAREGRAHSGDGDSSRXXXXXXXXXXXGRGPAPGLATDKIIGAGLSDVVMHEVGHTLGLRHNFVGSTLLTLEELQDPAKTAEVGLTSSVMDYLPINIVSSKMR------GSEEPHY-FTPRIGEYDMWAIKYGYMVVEGEAEEYLTQHEASLPSREGAMDLKTLASEALPFATDEDAPGSSGMNPLVSVFDLGKEPMDYWEDKLELVTELWPVLLERSTAMGDA------KFQRYGSTALSLLHQVLVSGLYSAKYIGGFDISKQRRIDDNTPGPIQLIPADRQRRALALILRVVTGDDPAGAASFLPGEEDLPNLAMRSGECQGLEQYCYGTVPVDVLSEVHAIRKSVLLHVFSFDHLMRLRLHSWAAGASASGSGDTLTVSE 2862
G T+LLH P + TVF F + G +D++ Q LR G E +L+ A P ++ T ++D V + E ING ++ + L +G+ L +L AFP +A ++V+ TP + +R S + LP P+ PR D+R+GY++ + ++G T G TD R V LI+R R+ D A+ AA A +P+TY+IDPSVP WR+ +K GVE W+PAFE AG +AI V P DE +P DY A D R+ SI+WAV +A+GP + DPRTGEIL + I+F + W+ AW FE S D+ SAR LS + S XXXXXXXXX XXXXXXX G + G+ + R +++ +L ++ +G GD P P ++ + A L DV MHEVGHTLG+RHNF ST + +L D T G SSVMDY+ + S++ G+E+ + F +G YD I YGY + A+E + A L A+ + A+ L F+TDED P + G +P S++D+ +P+ ++ D++ L L R+ A+G+ +RY AL +G Y AK IGGF SK R D P P+ PA Q RAL LIL++++ D A L LP R+G C+GL+ YCYG P ++L V R ++L + L L+ W G A+ S T +V E
Sbjct: 152 GTTSLLHMPLTSGSRTVFKFEPSPHVQGAIDLIAPQYELRLPPNGTISEETLAKGAWPGFVKTFAGTKVLRWETRLNASASEADRVEALEKGTCDVPLWRNASDPVVTPKPGCEPYSINGTSWLVDVSSWLASGVVLSSPLTGARLVGAEAFPTSARVSVQ---------TPSL----EVRVSFARLP--PLDGGFVPRAADDRIGYWDLRYTEVG----TESGPLTDQTTN-------RRVDLIHRWRL-------EPADKELAAKERAAGNLIAPAKPITYHIDPSVPERWRKAMKLGVELWQPAFERAGW-KDAIIAVAPGDEGFPEDYSAADSRYASISWAVSTDRVYAVGPHSYDPRTGEILDADIMFAHSWVDAWIRGFENEKGSAMARAGAEGHDGRDGRRQLDSSGSARLARRLSAAQRSVETALGESAPRAHRQHDHSXXXXXXXXXEEHDDXXXXXXXXXXXXXXXPCGIS---GAAAAR-------------EVAATLRAKLQL---DGVIAPGD-------------------PVP----EEYVEAALVDVTMHEVGHTLGMRHNFKASTAYSYAQLLDANFTKTNGFASSVMDYIGAFLPSNRSLPVVGSLGAEDGYNPFMGVVGAYDKHVIDYGYRPL---ADEQAGRQHAEL----AALAAEGAANRELAFSTDEDGPRTDGSDPTASLYDMSSDPLGFYIDQIALAQRLLEDASNRTVAIGEPWTKLLPAVERYMGAALK-------AGTYGAKNIGGFIFSKAHRGDPGAPDPMVPTPAADQWRALRLILQIISDDFWLPATDALRWARSLPR---RAGWCEGLDVYCYGLEPAELLERVFRTRVNLLHTLVQPHRLAGLQQAEWE-GLEAANSSSTRSVDE 956 The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig1002.134.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-lacustris_contig1002.134.1 >prot_P-lacustris_contig1002.134.1 ID=prot_P-lacustris_contig1002.134.1|Name=mRNA_P-lacustris_contig1002.134.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=1061bp MRRINSEEFEPLTSGQESLVAGERVCGRAKRLCCSRWVEAVLTLWGLAVLback to top mRNA from alignment at P-lacustris_contig1002:57852..76707- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-lacustris_contig1002.134.1 ID=mRNA_P-lacustris_contig1002.134.1|Name=mRNA_P-lacustris_contig1002.134.1|organism=Pleurocladia lacustris SAG_25_93|type=mRNA|length=18856bp|location=Sequence derived from alignment at P-lacustris_contig1002:57852..76707- (Pleurocladia lacustris SAG_25_93)back to top Coding sequence (CDS) from alignment at P-lacustris_contig1002:57852..76707- >mRNA_P-lacustris_contig1002.134.1 ID=mRNA_P-lacustris_contig1002.134.1|Name=mRNA_P-lacustris_contig1002.134.1|organism=Pleurocladia lacustris SAG_25_93|type=CDS|length=6366bp|location=Sequence derived from alignment at P-lacustris_contig1002:57852..76707- (Pleurocladia lacustris SAG_25_93)back to top |