Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | mitochondrion |
| Exons | 2 |
| Model size | 199 |
| Cds size | 198 |
| Stop | 0 |
| Start | 0 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815268.7627723-CDS-P-lacustris_contig1000:48178..48292 | 1622815268.7627723-CDS-P-lacustris_contig1000:48178..48292 | Pleurocladia lacustris SAG_25_93 | CDS | P-lacustris_contig1000 48179..48292 + |
| 1693493440.1110153-CDS-P-lacustris_contig1000:48178..48292 | 1693493440.1110153-CDS-P-lacustris_contig1000:48178..48292 | Pleurocladia lacustris SAG_25_93 | CDS | P-lacustris_contig1000 48179..48292 + |
| 1622815268.7752454-CDS-P-lacustris_contig1000:48377..48461 | 1622815268.7752454-CDS-P-lacustris_contig1000:48377..48461 | Pleurocladia lacustris SAG_25_93 | CDS | P-lacustris_contig1000 48378..48461 + |
| 1693493440.122796-CDS-P-lacustris_contig1000:48377..48461 | 1693493440.122796-CDS-P-lacustris_contig1000:48377..48461 | Pleurocladia lacustris SAG_25_93 | CDS | P-lacustris_contig1000 48378..48461 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-lacustris_contig1000.122.1 >prot_P-lacustris_contig1000.122.1 ID=prot_P-lacustris_contig1000.122.1|Name=mRNA_P-lacustris_contig1000.122.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=66bp
RRRLLANSVGRHVRWVRRSAPQNSGQAGCGYGCIGVRRLSGDMFGGFDAA
PPQRKPRQASAAANTP back to topmRNA from alignment at P-lacustris_contig1000:48179..48462+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-lacustris_contig1000.122.1 ID=mRNA_P-lacustris_contig1000.122.1|Name=mRNA_P-lacustris_contig1000.122.1|organism=Pleurocladia lacustris SAG_25_93|type=mRNA|length=284bp|location=Sequence derived from alignment at P-lacustris_contig1000:48179..48462+ (Pleurocladia lacustris SAG_25_93)
CGGCGGCGGCTTCTGGCGAACTCTGTCGGGCGACATGTTCGGTGGGTTCG
ACGGTCCGCCCCGCAGAACAGCGGCCAAGCCGGCTGCGGCTACGGCTGCA
TCGGCGTCCGGCGAGTTGTCTGGAGATATGTTCGATGGGTTCGACGGACC
TCCTCGCTCGCGGCCGTCGCCGCCTGCACCACCGGTAGCCGCCGGGGAGC
TGTCCGGCGACATGTTCGGCGGCTTCGATGCCGCGCCGCCGCAGAGGAAG
CCTAGGCAGGCGTCTGCCGCTGCCAACACGCCCT back to topCoding sequence (CDS) from alignment at P-lacustris_contig1000:48179..48462+ >mRNA_P-lacustris_contig1000.122.1 ID=mRNA_P-lacustris_contig1000.122.1|Name=mRNA_P-lacustris_contig1000.122.1|organism=Pleurocladia lacustris SAG_25_93|type=CDS|length=396bp|location=Sequence derived from alignment at P-lacustris_contig1000:48179..48462+ (Pleurocladia lacustris SAG_25_93)
CGGCGGCGGCTTCTGGCGAACTCTGTCGGGCGACATGTTCGGTGGGTTCG
ACGGTCCGCCCCGCAGAACAGCGGCCAAGCCGGCTGCGGCTACGGCTGCA
TCGGCGTCCGGCGACGGCGGCGGCTTCTGGCGAACTCTGTCGGGCGACAT
GTTCGGTGGGTTCGACGGTCCGCCCCGCAGAACAGCGGCCAAGCCGGCTG
CGGCTACGGCTGCATCGGCGTCCGGCGACTGTCCGGCGACATGTTCGGCG
GCTTCGATGCCGCGCCGCCGCAGAGGAAGCCTAGGCAGGCGTCTGCCGCT
GCCAACACGCCCCTGTCCGGCGACATGTTCGGCGGCTTCGATGCCGCGCC
GCCGCAGAGGAAGCCTAGGCAGGCGTCTGCCGCTGCCAACACGCCC back to top
|