mRNA_P-wetherbeei_contig16334.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
|
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig16334.1.1 vs. uniprot
Match: A0A1F3A8B9_9PROT (ABC transporter ATP-binding protein n=2 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A1F3A8B9_9PROT) HSP 1 Score: 436 bits (1121), Expect = 1.500e-153 Identity = 227/248 (91.53%), Postives = 236/248 (95.16%), Query Frame = 1
Query: 1 VVEPLLRTDKLVKRFGGLVATDMVSIDVRPGEIHALIGPNGAGKTTLVSQLTGSLAPDAGTIHFAGRDVTRLPTHARVRLGLARSFQITSVLREFTALENVALAVQAHAGHSFRFLADVRRDERLRGPARLGLEAVGLGARAETLAATLSHGEQRQLEIAMALAGGPKLLLLDEPMAGMGGEESQRMIGFLRGLKSKRAMLLIEHDMDAVFQLADRITVLVYGRAIASGTPDQIRANAEVRQAYLGEE 744
+VEPLL TD+LVKRFGGLVATD VSIDVRPGEIHALIGPNGAGKTTLVSQLTG+LAPDAGTI F GRDVTRLPTHARVRLGLARSFQITSVLREFTAL+NVALAVQAHAGHSFRFLAD R DERLR PAR GLEAVGLGARA+TLAATLSHGEQRQLEIAMALAG PKLLLLDEPMAGMG EESQRMIGFL+ LK KRA+LLIEHDMDAVFQLADRITVLVYGRAIASGTPD+IRANAEVRQAYLG+E
Sbjct: 1 MVEPLLSTDRLVKRFGGLVATDTVSIDVRPGEIHALIGPNGAGKTTLVSQLTGNLAPDAGTIRFDGRDVTRLPTHARVRLGLARSFQITSVLREFTALDNVALAVQAHAGHSFRFLADARYDERLRAPARRGLEAVGLGARADTLAATLSHGEQRQLEIAMALAGDPKLLLLDEPMAGMGAEESQRMIGFLQALKGKRAILLIEHDMDAVFQLADRITVLVYGRAIASGTPDEIRANAEVRQAYLGDE 248
BLAST of mRNA_P-wetherbeei_contig16334.1.1 vs. uniprot
Match: A0A259MM61_9PROT (ABC transporter ATP-binding protein n=4 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A259MM61_9PROT) HSP 1 Score: 415 bits (1066), Expect = 3.240e-145 Identity = 214/248 (86.29%), Postives = 227/248 (91.53%), Query Frame = 1
Query: 1 VVEPLLRTDKLVKRFGGLVATDMVSIDVRPGEIHALIGPNGAGKTTLVSQLTGSLAPDAGTIHFAGRDVTRLPTHARVRLGLARSFQITSVLREFTALENVALAVQAHAGHSFRFLADVRRDERLRGPARLGLEAVGLGARAETLAATLSHGEQRQLEIAMALAGGPKLLLLDEPMAGMGGEESQRMIGFLRGLKSKRAMLLIEHDMDAVFQLADRITVLVYGRAIASGTPDQIRANAEVRQAYLGEE 744
+ EPLLRT+ LVKR+GGL+ATD VSIDVRPGEIHALIGPNGAGKTTL+ QLTG +APD+G IHFAGRDVTRLPTHARVRLGL RSFQITSVLREFTALENVALAVQ HAGHSFRFLAD RRDE LRGPAR LE VGLG RA+TLAA+LSHGEQRQLEIAMALAG P+LLLLDEPMAGMG EESQR+IGFL+ LK AMLLIEHDMDAVFQLADRITVLVYGRAIASGTPDQIRAN +VRQAYLGEE
Sbjct: 1 MTEPLLRTEGLVKRYGGLLATDNVSIDVRPGEIHALIGPNGAGKTTLIHQLTGVVAPDSGAIHFAGRDVTRLPTHARVRLGLGRSFQITSVLREFTALENVALAVQGHAGHSFRFLADARRDESLRGPARRLLEEVGLGERADTLAASLSHGEQRQLEIAMALAGDPRLLLLDEPMAGMGAEESQRLIGFLQALKQNHAMLLIEHDMDAVFQLADRITVLVYGRAIASGTPDQIRANPDVRQAYLGEE 248
BLAST of mRNA_P-wetherbeei_contig16334.1.1 vs. uniprot
Match: A0A1H8W5T2_9PROT (Branched-chain amino acid transport system ATP-binding protein n=3 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A1H8W5T2_9PROT) HSP 1 Score: 413 bits (1061), Expect = 1.870e-144 Identity = 212/247 (85.83%), Postives = 226/247 (91.50%), Query Frame = 1
Query: 1 VVEPLLRTDKLVKRFGGLVATDMVSIDVRPGEIHALIGPNGAGKTTLVSQLTGSLAPDAGTIHFAGRDVTRLPTHARVRLGLARSFQITSVLREFTALENVALAVQAHAGHSFRFLADVRRDERLRGPARLGLEAVGLGARAETLAATLSHGEQRQLEIAMALAGGPKLLLLDEPMAGMGGEESQRMIGFLRGLKSKRAMLLIEHDMDAVFQLADRITVLVYGRAIASGTPDQIRANAEVRQAYLGE 741
+ EP+L L+KRFGGL+ATD VSIDVRPGEIHALIGPNGAGKTTLVSQLTG++ PD GTIHFAGRD+T LP HARVRLGLARSFQITSVLREFTAL+NVALAVQAHAGHSFRFLADVRRDE LRGPAR GLE VGL ARA+T AA LSHGEQRQLEIAMALAG P++LLLDEPMAGMG EESQRMIGFL+GLK +R MLLIEHDMDAVFQLADRITVLVYGRAIASGTP +IRANAEVRQAYLGE
Sbjct: 1 MAEPMLAASGLIKRFGGLIATDNVSIDVRPGEIHALIGPNGAGKTTLVSQLTGNMQPDTGTIHFAGRDITHLPMHARVRLGLARSFQITSVLREFTALDNVALAVQAHAGHSFRFLADVRRDESLRGPARRGLEEVGLAARADTPAANLSHGEQRQLEIAMALAGDPRMLLLDEPMAGMGVEESQRMIGFLQGLKDRRGMLLIEHDMDAVFQLADRITVLVYGRAIASGTPAEIRANAEVRQAYLGE 247
BLAST of mRNA_P-wetherbeei_contig16334.1.1 vs. uniprot
Match: UPI001E3D4A59 (ABC transporter ATP-binding protein n=1 Tax=Reyranella aquatilis TaxID=2035356 RepID=UPI001E3D4A59) HSP 1 Score: 409 bits (1051), Expect = 6.240e-143 Identity = 211/248 (85.08%), Postives = 225/248 (90.73%), Query Frame = 1
Query: 7 EPLLRTDKLVKRFGGLVATDMVSIDVRPGEIHALIGPNGAGKTTLVSQLTGSLAPDAGTIHFAGRDVTRLPTHARVRLGLARSFQITSVLREFTALENVALAVQAHAGHSFRFLADVRRDERLRGPARLGLEAVGLGARAETLAATLSHGEQRQLEIAMALAGGPKLLLLDEPMAGMGGEESQRMIGFLRGLKSKRAMLLIEHDMDAVFQLADRITVLVYGRAIASGTPDQIRANAEVRQAYLGEEVA 750
EPLLRT++LVKR+GGL+ATD VSIDVRPGEIHALIGPNGAGKTTLV QLTG +APD+GTIHFAG D+TRLPTHARVRLGL RSFQITSVLREFTALENVALAVQ HAGHSFRFLAD RRDE LR PAR L+ VGLGAR LA+ LSHGEQRQLE+AMALAG P +LLLDEPMAGMG EESQR+IGFLR LK K AMLLIEHDMDAVFQLADRITVLVYGRAIASGTP +IRANAEVRQAYLGEE+A
Sbjct: 3 EPLLRTERLVKRYGGLLATDNVSIDVRPGEIHALIGPNGAGKTTLVHQLTGVVAPDSGTIHFAGHDITRLPTHARVRLGLGRSFQITSVLREFTALENVALAVQGHAGHSFRFLADARRDETLRAPARRLLDEVGLGARGSVLASALSHGEQRQLELAMALAGDPTVLLLDEPMAGMGVEESQRLIGFLRALKQKHAMLLIEHDMDAVFQLADRITVLVYGRAIASGTPGEIRANAEVRQAYLGEEMA 250
BLAST of mRNA_P-wetherbeei_contig16334.1.1 vs. uniprot
Match: A0A521QHV5_9HYPH (ABC transporter ATP-binding protein n=2 Tax=Reyranella TaxID=445219 RepID=A0A521QHV5_9HYPH) HSP 1 Score: 407 bits (1046), Expect = 4.470e-142 Identity = 211/246 (85.77%), Postives = 223/246 (90.65%), Query Frame = 1
Query: 7 EPLLRTDKLVKRFGGLVATDMVSIDVRPGEIHALIGPNGAGKTTLVSQLTGSLAPDAGTIHFAGRDVTRLPTHARVRLGLARSFQITSVLREFTALENVALAVQAHAGHSFRFLADVRRDERLRGPARLGLEAVGLGARAETLAATLSHGEQRQLEIAMALAGGPKLLLLDEPMAGMGGEESQRMIGFLRGLKSKRAMLLIEHDMDAVFQLADRITVLVYGRAIASGTPDQIRANAEVRQAYLGEE 744
+PLL TD+LVKRFGGL+ATD VSIDV PGEIHALIGPNGAGKTTLV QLTG++ PD+GTI FAG+D+TRLPTH RV LGLARSFQITSVLREFTALENVALAVQAH GHSFRFLAD R DE LRGPAR GLE VGLG RA TLAA LSHGEQRQLEIAMALAG P LLLLDEPMAGMG EESQRMIGFLR LKSKRAMLLIEHDMDAVFQLADRITVLVYGRAIASGTP +IRAN +VRQAYLG++
Sbjct: 7 QPLLSTDRLVKRFGGLLATDNVSIDVVPGEIHALIGPNGAGKTTLVGQLTGNVTPDSGTIRFAGQDITRLPTHKRVHLGLARSFQITSVLREFTALENVALAVQAHVGHSFRFLADARNDESLRGPARRGLEEVGLGDRANTLAAALSHGEQRQLEIAMALAGDPSLLLLDEPMAGMGVEESQRMIGFLRALKSKRAMLLIEHDMDAVFQLADRITVLVYGRAIASGTPAEIRANKDVRQAYLGDD 252
BLAST of mRNA_P-wetherbeei_contig16334.1.1 vs. uniprot
Match: A0A1T4RLQ5_9HYPH (Branched-chain amino acid transport system ATP-binding protein n=1 Tax=Enhydrobacter aerosaccus TaxID=225324 RepID=A0A1T4RLQ5_9HYPH) HSP 1 Score: 399 bits (1024), Expect = 8.090e-139 Identity = 209/250 (83.60%), Postives = 224/250 (89.60%), Query Frame = 1
Query: 1 VVEPLLRTDKLVKRFGGLVATDMVSIDVRPGEIHALIGPNGAGKTTLVSQLTGSLAPDAGTIHFAGRDVTRLPTHARVRLGLARSFQITSVLREFTALENVALAVQAHAGHSFRFLADVRRDERLRGPARLGLEAVGLGARAETLAATLSHGEQRQLEIAMALAGGPKLLLLDEPMAGMGGEESQRMIGFLRGLKSKRAMLLIEHDMDAVFQLADRITVLVYGRAIASGTPDQIRANAEVRQAYLGEEVA 750
+ EPLL LVKRFGGL+ATD VSI+V PGEIHALIGPNGAGKTTLVSQLTG+L PD+G+I FAGRDVTRLP HARVRLGLARSFQIT+VLR+FTAL+NVALAVQAH GHSFRFLADVR D RLR AR GLEAVGL ARAETLA+ LSHGEQRQLEIAMALAG P+LLLLDEPMAGMG EESQR++G LR LKS+ MLLIEHDMDAVF LADRITVLVYGRAIASGTPDQIR NA+VRQAYLGEEVA
Sbjct: 1 MAEPLLSAQGLVKRFGGLLATDNVSIEVMPGEIHALIGPNGAGKTTLVSQLTGNLRPDSGSIRFAGRDVTRLPLHARVRLGLARSFQITAVLRDFTALDNVALAVQAHDGHSFRFLADVRADRRLRDSARRGLEAVGLQARAETLASALSHGEQRQLEIAMALAGEPRLLLLDEPMAGMGPEESQRLVGMLRNLKSRCGMLLIEHDMDAVFALADRITVLVYGRAIASGTPDQIRGNAQVRQAYLGEEVA 250
BLAST of mRNA_P-wetherbeei_contig16334.1.1 vs. uniprot
Match: A0A521L1E4_9HYPH (ABC transporter ATP-binding protein n=1 Tax=Reyranella sp. TaxID=1929291 RepID=A0A521L1E4_9HYPH) HSP 1 Score: 398 bits (1023), Expect = 1.150e-138 Identity = 209/247 (84.62%), Postives = 220/247 (89.07%), Query Frame = 1
Query: 10 PLLRTDKLVKRFGGLVATDMVSIDVRPGEIHALIGPNGAGKTTLVSQLTGSLAPDAGTIHFAGRDVTRLPTHARVRLGLARSFQITSVLREFTALENVALAVQAHAGHSFRFLADVRRDERLRGPARLGLEAVGLGARAETLAATLSHGEQRQLEIAMALAGGPKLLLLDEPMAGMGGEESQRMIGFLRGLKSKRAMLLIEHDMDAVFQLADRITVLVYGRAIASGTPDQIRANAEVRQAYLGEEVA 750
PLL TD+LVKR+GGLVATD VSIDV PGEIHALIGPNGAGKTTLV QLTG++ PD+GTI FAG DVTRL THARV LGLARSFQITSVLREFTALENVALAVQAHAGHSFRFL D R DE LRGPAR LE VGLG+RA+ AA LSHGEQRQLEIAMALAG P+LLLLDEPMAGMG EESQRMIGFLR LK +RAMLLIEHDMDAVFQLADRITVLVYGRAIASG P +IRAN +VRQAYLGEE A
Sbjct: 4 PLLSTDRLVKRYGGLVATDNVSIDVVPGEIHALIGPNGAGKTTLVGQLTGNVTPDSGTIRFAGHDVTRLKTHARVALGLARSFQITSVLREFTALENVALAVQAHAGHSFRFLRDARSDESLRGPARTLLEEVGLGSRADAPAAALSHGEQRQLEIAMALAGDPQLLLLDEPMAGMGAEESQRMIGFLRALKGRRAMLLIEHDMDAVFQLADRITVLVYGRAIASGPPAEIRANPDVRQAYLGEETA 250
BLAST of mRNA_P-wetherbeei_contig16334.1.1 vs. uniprot
Match: A0A537MS68_9PROT (ABC transporter ATP-binding protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537MS68_9PROT) HSP 1 Score: 384 bits (985), Expect = 7.030e-133 Identity = 203/250 (81.20%), Postives = 217/250 (86.80%), Query Frame = 1
Query: 1 VVEPLLRTDKLVKRFGGLVATDMVSIDVRPGEIHALIGPNGAGKTTLVSQLTGSLAPDAGTIHFAGRDVTRLPTHARVRLGLARSFQITSVLREFTALENVALAVQAHAGHSFRFLADVRRDERLRGPARLGLEAVGLGARAETLAATLSHGEQRQLEIAMALAGGPKLLLLDEPMAGMGGEESQRMIGFLRGLKSKRAMLLIEHDMDAVFQLADRITVLVYGRAIASGTPDQIRANAEVRQAYLGEEVA 750
+VEPLL TD+LVK FGGL+ATD VSIDVRPGEIHALIGPNGAGKTTLV QLTG LAPD+GTI FAGRD+TRLPTHARVRLGL RSFQITSVLREF+AL+NVALAVQAH GHSFRFLADVRRD LR A+ GL+AVGLGARA AA LSHGEQRQLEIAMALAG PKLLLLDEP AGMG EESQRM+ LRGLK MLLIEHDMDAVF LADRITVLVYGR + GTPD+IR + EVRQAYLGE+ A
Sbjct: 1 MVEPLLSTDRLVKHFGGLLATDDVSIDVRPGEIHALIGPNGAGKTTLVGQLTGLLAPDSGTIRFAGRDITRLPTHARVRLGLGRSFQITSVLREFSALDNVALAVQAHQGHSFRFLADVRRDRALRTAAQGGLDAVGLGARAAMPAAALSHGEQRQLEIAMALAGEPKLLLLDEPTAGMGVEESQRMVETLRGLKRSCGMLLIEHDMDAVFALADRITVLVYGRVLFCGTPDEIRRHPEVRQAYLGEDGA 250
BLAST of mRNA_P-wetherbeei_contig16334.1.1 vs. uniprot
Match: A0A1Q3KQ47_9PROT (ABC transporter ATP-binding protein n=1 Tax=Alphaproteobacteria bacterium 65-37 TaxID=1895711 RepID=A0A1Q3KQ47_9PROT) HSP 1 Score: 381 bits (979), Expect = 6.180e-132 Identity = 201/245 (82.04%), Postives = 216/245 (88.16%), Query Frame = 1
Query: 10 PLLRTDKLVKRFGGLVATDMVSIDVRPGEIHALIGPNGAGKTTLVSQLTGSLAPDAGTIHFAGRDVTRLPTHARVRLGLARSFQITSVLREFTALENVALAVQAHAGHSFRFLADVRRDERLRGPARLGLEAVGLGARAETLAATLSHGEQRQLEIAMALAGGPKLLLLDEPMAGMGGEESQRMIGFLRGLKSKRAMLLIEHDMDAVFQLADRITVLVYGRAIASGTPDQIRANAEVRQAYLGEE 744
PLL TD+LVKR+GGL+ATD VSIDV GEIHALIGPNGAGKTTLV QLTG++APD+GTI FAG+D+TRLPTH RV LGLARSFQITSVL EFTALENVALAVQAHAGHSFRFL DVR DE LRGPAR LE VGL ARA A+ LSHGEQRQLEIAMALAG P LLLLDEPMAGMG EESQRMI FLR LK +RAMLLIEHDMDAVFQLADRITVLVYGRAIASGTP +IRA+ VR+AYLG++
Sbjct: 4 PLLSTDRLVKRYGGLLATDNVSIDVASGEIHALIGPNGAGKTTLVGQLTGNVAPDSGTIRFAGQDITRLPTHRRVHLGLARSFQITSVLGEFTALENVALAVQAHAGHSFRFLRDVRGDESLRGPARHCLEEVGLDARAGMPASALSHGEQRQLEIAMALAGDPSLLLLDEPMAGMGVEESQRMIAFLRALKGRRAMLLIEHDMDAVFQLADRITVLVYGRAIASGTPAEIRADEAVRRAYLGDD 248
BLAST of mRNA_P-wetherbeei_contig16334.1.1 vs. uniprot
Match: A0A5C5SA16_9HYPH (ABC transporter ATP-binding protein n=2 Tax=Reyranella sp. CPCC 100927 TaxID=2599616 RepID=A0A5C5SA16_9HYPH) HSP 1 Score: 343 bits (880), Expect = 6.070e-117 Identity = 180/243 (74.07%), Postives = 201/243 (82.72%), Query Frame = 1
Query: 13 LLRTDKLVKRFGGLVATDMVSIDVRPGEIHALIGPNGAGKTTLVSQLTGSLAPDAGTIHFAGRDVTRLPTHARVRLGLARSFQITSVLREFTALENVALAVQAHAGHSFRFLADVRRDERLRGPARLGLEAVGLGARAETLAATLSHGEQRQLEIAMALAGGPKLLLLDEPMAGMGGEESQRMIGFLRGLKSKRAMLLIEHDMDAVFQLADRITVLVYGRAIASGTPDQIRANAEVRQAYLGE 741
+L+ + LVKRFGGLVATD +S+DVR GE+HALIGPNGAGKTTL++QL+G L PDAG I F RD+T LP ARVRLGLARSFQITSVLR+FTAL+NVALA QA GHSFRF R D LRGPA LEAVGL RA+ AA+LSHGEQRQLE+AMALA P+LLLLDEPMAGMG EES RM+ LRGL+ +R MLLIEHDMDAVF LADRITVLVYGRAIA+GTP +IRAN EVR AYLGE
Sbjct: 1 MLKVEGLVKRFGGLVATDNLSLDVRDGEVHALIGPNGAGKTTLIAQLSGFLRPDAGRITFTDRDITALPAAARVRLGLARSFQITSVLRDFTALDNVALAEQARQGHSFRFWQPARSDRSLRGPASAALEAVGLAHRADDPAASLSHGEQRQLEVAMALACDPRLLLLDEPMAGMGPEESARMVDLLRGLRGQRTMLLIEHDMDAVFALADRITVLVYGRAIATGTPAEIRANPEVRTAYLGE 243 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig16334.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig16334.1.1 >prot_P-wetherbeei_contig16334.1.1 ID=prot_P-wetherbeei_contig16334.1.1|Name=mRNA_P-wetherbeei_contig16334.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=251bp VVEPLLRTDKLVKRFGGLVATDMVSIDVRPGEIHALIGPNGAGKTTLVSQback to top mRNA from alignment at P-wetherbeei_contig16334:65..817- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig16334.1.1 ID=mRNA_P-wetherbeei_contig16334.1.1|Name=mRNA_P-wetherbeei_contig16334.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=753bp|location=Sequence derived from alignment at P-wetherbeei_contig16334:65..817- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig16334:65..817- >mRNA_P-wetherbeei_contig16334.1.1 ID=mRNA_P-wetherbeei_contig16334.1.1|Name=mRNA_P-wetherbeei_contig16334.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=753bp|location=Sequence derived from alignment at P-wetherbeei_contig16334:65..817- (Phaeothamnion wetherbeei SAG_119_79)back to top |