mRNA_P-wetherbeei_contig10485.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig10485.2.1
Unique NamemRNA_P-wetherbeei_contig10485.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig10485.2.1 vs. uniprot
Match: UPI001665CC02 (DUF445 domain-containing protein n=1 Tax=Terasakiella brassicae TaxID=1634917 RepID=UPI001665CC02)

HSP 1 Score: 130 bits (326), Expect = 9.870e-36
Identity = 61/96 (63.54%), Postives = 76/96 (79.17%), Query Frame = 1
Query:    1 MNMSSATNLISLLITIAGYFMTGRAGSMVFDTGIFALSGAITNWLAIYMLFDKVPYLYGSGVIPMRFEEFKDGIKRLIVSEFFTREHIERFFTNNA 288
            MN S+ TNL++LL  + GYF+    G + F  G+FALSG ITNWLA++MLF+KVP+LYGSGVIP RFE+FK GIK+LIV EFF+ EHIERFF  N+
Sbjct:    1 MNKSAMTNLVALLFCVIGYFLPVH-GDLFFTVGLFALSGGITNWLAVHMLFEKVPFLYGSGVIPSRFEDFKAGIKKLIVEEFFSHEHIERFFLQNS 95          
BLAST of mRNA_P-wetherbeei_contig10485.2.1 vs. uniprot
Match: A0A850KLP3_9HYPH (DUF445 domain-containing protein n=1 Tax=Methylocystaceae bacterium TaxID=2052174 RepID=A0A850KLP3_9HYPH)

HSP 1 Score: 127 bits (320), Expect = 8.570e-35
Identity = 60/96 (62.50%), Postives = 77/96 (80.21%), Query Frame = 1
Query:    1 MNMSSATNLISLLITIAGYFMTGRAGSMVFDTGIFALSGAITNWLAIYMLFDKVPYLYGSGVIPMRFEEFKDGIKRLIVSEFFTREHIERFFTNNA 288
            MN S  TN+I+ ++ +AG  +    G +++  GIFALSGA+TNWLA++MLF+KVP+LYGSGVIP RFEEFK GIK+LI+ EFF+REHIERFF  NA
Sbjct:    1 MNKSLLTNVIAAVLVVAGLILPAH-GDILYIVGIFALSGALTNWLAVHMLFEKVPFLYGSGVIPSRFEEFKAGIKKLIIEEFFSREHIERFFQQNA 95          
BLAST of mRNA_P-wetherbeei_contig10485.2.1 vs. uniprot
Match: UPI00049196C1 (hypothetical protein n=1 Tax=Terasakiella pusilla TaxID=64973 RepID=UPI00049196C1)

HSP 1 Score: 127 bits (319), Expect = 1.180e-34
Identity = 59/93 (63.44%), Postives = 75/93 (80.65%), Query Frame = 1
Query:    1 MNMSSATNLISLLITIAGYFMT-GRAGSMVFDTGIFALSGAITNWLAIYMLFDKVPYLYGSGVIPMRFEEFKDGIKRLIVSEFFTREHIERFF 276
            MN S  TNL++ ++T+ GY +     G ++   G+FALSGA+TNWLAI+MLF+KVP+LYGSGV+P RFEEFK GIK+LIV EFF+REHIERFF
Sbjct:    1 MNKSFLTNLVAAVVTVVGYVLPENHYGELIMMVGVFALSGAVTNWLAIHMLFEKVPFLYGSGVVPNRFEEFKAGIKQLIVQEFFSREHIERFF 93          
BLAST of mRNA_P-wetherbeei_contig10485.2.1 vs. uniprot
Match: A0A7Y6YU03_9HYPH (DUF445 domain-containing protein n=1 Tax=Methylocystaceae bacterium TaxID=2052174 RepID=A0A7Y6YU03_9HYPH)

HSP 1 Score: 126 bits (317), Expect = 2.240e-34
Identity = 62/95 (65.26%), Postives = 74/95 (77.89%), Query Frame = 1
Query:    1 MNMSSATNLISLLITIAGYFMTGRAGSMVFDTGIFALSGAITNWLAIYMLFDKVPYLYGSGVIPMRFEEFKDGIKRLIVSEFFTREHIERFFTNN 285
            MN S  TNLI+L++ I GY M    G +V   G+FALSG ITNWLAI+MLF+KVP+LYGSGVIP RFE+FK GIK LI+ EFF+ EHIERFF +N
Sbjct:    1 MNKSVLTNLIALIVIIVGY-MLPEYGELVMMVGLFALSGGITNWLAIHMLFEKVPFLYGSGVIPNRFEDFKAGIKHLIIQEFFSHEHIERFFQDN 94          
BLAST of mRNA_P-wetherbeei_contig10485.2.1 vs. uniprot
Match: UPI001073BA65 (DUF445 domain-containing protein n=1 Tax=Terasakiella sp. SH-1 TaxID=2560057 RepID=UPI001073BA65)

HSP 1 Score: 125 bits (313), Expect = 8.990e-34
Identity = 60/97 (61.86%), Postives = 75/97 (77.32%), Query Frame = 1
Query:    1 MNMSSATNLISLLITIAGYFMTGRAGSMVFDTGIFALSGAITNWLAIYMLFDKVPYLYGSGVIPMRFEEFKDGIKRLIVSEFFTREHIERFFTNNAA 291
            MN S  TNLI+  + + GY M    G M+F  G+FALSG++TNWLAI+MLF+KVP LYGSGVIP RF+EFK GIK+LI+ EFF+ EHIERFF  N++
Sbjct:    1 MNKSILTNLIAFGVCVIGYTMPEN-GEMIFTVGLFALSGSLTNWLAIHMLFEKVPLLYGSGVIPNRFDEFKAGIKKLIIEEFFSHEHIERFFEQNSS 96          
BLAST of mRNA_P-wetherbeei_contig10485.2.1 vs. uniprot
Match: A0A3B8QLW9_9RHOB (DUF445 domain-containing protein (Fragment) n=1 Tax=Rhodobacteraceae bacterium TaxID=1904441 RepID=A0A3B8QLW9_9RHOB)

HSP 1 Score: 123 bits (309), Expect = 1.870e-33
Identity = 59/99 (59.60%), Postives = 75/99 (75.76%), Query Frame = 1
Query:    4 NMSSATNLISLLITIAGYFMTGRAGSMVFDTGIFALSGAITNWLAIYMLFDKVPYLYGSGVIPMRFEEFKDGIKRLIVSEFFTREHIERFFTNNAATAA 300
            N S  TNL++ LI + GYF    +  ++F TG+FALSG+ITNWLAI+MLF++VP LYGSGVIP RFEEFK  IK LI+ +FFTREHIE+FF++     A
Sbjct:    3 NKSLLTNLLAFLICVGGYFSPAHS-DLIFMTGMFALSGSITNWLAIHMLFERVPLLYGSGVIPNRFEEFKAAIKSLIIEQFFTREHIEKFFSDGTGQTA 100          
BLAST of mRNA_P-wetherbeei_contig10485.2.1 vs. uniprot
Match: A0A3D4K896_9PROT (DUF445 domain-containing protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3D4K896_9PROT)

HSP 1 Score: 124 bits (310), Expect = 2.070e-33
Identity = 59/96 (61.46%), Postives = 74/96 (77.08%), Query Frame = 1
Query:    7 MSSATNLISLLITIAGYFMTGRAGSMVFDTGIFALSGAITNWLAIYMLFDKVPYLYGSGVIPMRFEEFKDGIKRLIVSEFFTREHIERFFTNNAAT 294
            MS  TN+IS+ + I G++ +    S + +TG FA SGAITNWLAIYMLF+KVP+LYGSGV+P RFEEFK GIK LI+ EFF R+H+E+FFT N  T
Sbjct:    1 MSLLTNIISIALIIIGFY-SPIYSSQIMNTGFFAFSGAITNWLAIYMLFEKVPFLYGSGVVPNRFEEFKAGIKNLIIKEFFNRQHLEQFFTENNFT 95          
BLAST of mRNA_P-wetherbeei_contig10485.2.1 vs. uniprot
Match: A0A1C3RD76_9PROT (Uncharacterized protein n=1 Tax=Candidatus Terasakiella magnetica TaxID=1867952 RepID=A0A1C3RD76_9PROT)

HSP 1 Score: 123 bits (308), Expect = 5.220e-33
Identity = 57/97 (58.76%), Postives = 74/97 (76.29%), Query Frame = 1
Query:    1 MNMSSATNLISLLITIAGYFMTGRAGSMVFDTGIFALSGAITNWLAIYMLFDKVPYLYGSGVIPMRFEEFKDGIKRLIVSEFFTREHIERFFTNNAA 291
            MN S+ TNLI+L + + G+ +    G  +F  G+FALSG +TNWLA++MLF+KVP LYGSGVIP RF+EFK GIK+LI+ EFF+ EHIERFF  N +
Sbjct:    1 MNKSALTNLIALALCVVGFLLPAH-GDALFTIGLFALSGGLTNWLAVHMLFEKVPLLYGSGVIPNRFDEFKAGIKKLIIEEFFSHEHIERFFEQNGS 96          
BLAST of mRNA_P-wetherbeei_contig10485.2.1 vs. uniprot
Match: A0A660T5I5_9SPIR (DUF445 domain-containing protein n=1 Tax=Spirochaetes bacterium TaxID=2202144 RepID=A0A660T5I5_9SPIR)

HSP 1 Score: 121 bits (304), Expect = 2.890e-32
Identity = 57/98 (58.16%), Postives = 77/98 (78.57%), Query Frame = 1
Query:    1 MNMSSATNLISLLITIAGYFMTGRAGSMVFDTGIFALSGAITNWLAIYMLFDKVPYLYGSGVIPMRFEEFKDGIKRLIVSEFFTREHIERFFTNNAAT 294
            MN S  TNL++LL+ I GYF    +   +   G FALSGAITNWLAI+MLF+KVP LYGSGV+P+ F+EFK+GI+ LI++EFFT+E++E+FF+ +A T
Sbjct:    1 MNKSLGTNLVALLVIIGGYFSPWFS-LQILSIGFFALSGAITNWLAIHMLFEKVPLLYGSGVVPLHFKEFKEGIRHLIMTEFFTKENLEKFFSESAGT 97          
BLAST of mRNA_P-wetherbeei_contig10485.2.1 vs. uniprot
Match: A0A1Q6CJP4_9GAMM (DUF445 domain-containing protein n=1 Tax=Thalassotalea sp. PP2-459 TaxID=1742724 RepID=A0A1Q6CJP4_9GAMM)

HSP 1 Score: 121 bits (303), Expect = 3.790e-32
Identity = 57/100 (57.00%), Postives = 80/100 (80.00%), Query Frame = 1
Query:    1 MNMSSATNLISLLITIAGYFMTGRAGSMVFDTGIFALSGAITNWLAIYMLFDKVPYLYGSGVIPMRFEEFKDGIKRLIVSEFFTREHIERFFTNNAATAA 300
            MN S  TN+++LL+TI+GY+ +     +V+  GIFALSGAITNWLA++MLF+KVP+LYGSGVIP RFEEFK  I+ L++ +FFT ++I+RF ++NA  A+
Sbjct:    1 MNKSLITNVLALLVTISGYYFSMN---VVYAMGIFALSGAITNWLAVHMLFEKVPFLYGSGVIPARFEEFKAAIRHLMMEQFFTEDNIDRFLSDNAGKAS 97          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig10485.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI001665CC029.870e-3663.54DUF445 domain-containing protein n=1 Tax=Terasakie... [more]
A0A850KLP3_9HYPH8.570e-3562.50DUF445 domain-containing protein n=1 Tax=Methylocy... [more]
UPI00049196C11.180e-3463.44hypothetical protein n=1 Tax=Terasakiella pusilla ... [more]
A0A7Y6YU03_9HYPH2.240e-3465.26DUF445 domain-containing protein n=1 Tax=Methylocy... [more]
UPI001073BA658.990e-3461.86DUF445 domain-containing protein n=1 Tax=Terasakie... [more]
A0A3B8QLW9_9RHOB1.870e-3359.60DUF445 domain-containing protein (Fragment) n=1 Ta... [more]
A0A3D4K896_9PROT2.070e-3361.46DUF445 domain-containing protein n=1 Tax=Alphaprot... [more]
A0A1C3RD76_9PROT5.220e-3358.76Uncharacterized protein n=1 Tax=Candidatus Terasak... [more]
A0A660T5I5_9SPIR2.890e-3258.16DUF445 domain-containing protein n=1 Tax=Spirochae... [more]
A0A1Q6CJP4_9GAMM3.790e-3257.00DUF445 domain-containing protein n=1 Tax=Thalassot... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig10485contigP-wetherbeei_contig10485:2038..2337 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog1123355.JHYO01000006_gene2222
PFAMsDUF445
Model size300
Max annot lvl1224|Proteobacteria
Hectar predicted targeting categorysignal peptide
Exons1
Evalue5.48e-35
EggNOG OGsCOG2733@1|root,COG2733@2|Bacteria,1R4JT@1224|Proteobacteria
DescriptionProtein conserved in bacteria
Cds size300
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185871.5759785-CDS-P-wetherbeei_contig10485:2037..23371683185871.5759785-CDS-P-wetherbeei_contig10485:2037..2337Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig10485 2038..2337 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig10485.2.1prot_P-wetherbeei_contig10485.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig10485 2038..2337 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig10485.2.1

>prot_P-wetherbeei_contig10485.2.1 ID=prot_P-wetherbeei_contig10485.2.1|Name=mRNA_P-wetherbeei_contig10485.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=100bp
MNMSSATNLISLLITIAGYFMTGRAGSMVFDTGIFALSGAITNWLAIYML
FDKVPYLYGSGVIPMRFEEFKDGIKRLIVSEFFTREHIERFFTNNAATAA
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mRNA from alignment at P-wetherbeei_contig10485:2038..2337+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig10485.2.1 ID=mRNA_P-wetherbeei_contig10485.2.1|Name=mRNA_P-wetherbeei_contig10485.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=300bp|location=Sequence derived from alignment at P-wetherbeei_contig10485:2038..2337+ (Phaeothamnion wetherbeei SAG_119_79)
ATGAATATGAGTTCCGCTACCAATCTCATCTCGCTGCTCATCACCATCGC CGGCTACTTCATGACCGGTCGGGCGGGCAGCATGGTGTTCGATACCGGCA TCTTTGCCCTGTCGGGTGCGATCACCAACTGGCTGGCCATCTACATGCTG TTCGACAAGGTGCCCTATCTGTACGGCTCGGGCGTTATCCCGATGCGCTT CGAGGAATTCAAGGACGGTATCAAGCGTCTCATCGTCAGCGAATTCTTCA CCCGCGAACACATTGAGCGCTTCTTCACCAACAATGCCGCAACCGCCGCC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig10485:2038..2337+

>mRNA_P-wetherbeei_contig10485.2.1 ID=mRNA_P-wetherbeei_contig10485.2.1|Name=mRNA_P-wetherbeei_contig10485.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=300bp|location=Sequence derived from alignment at P-wetherbeei_contig10485:2038..2337+ (Phaeothamnion wetherbeei SAG_119_79)
ATGAATATGAGTTCCGCTACCAATCTCATCTCGCTGCTCATCACCATCGC
CGGCTACTTCATGACCGGTCGGGCGGGCAGCATGGTGTTCGATACCGGCA
TCTTTGCCCTGTCGGGTGCGATCACCAACTGGCTGGCCATCTACATGCTG
TTCGACAAGGTGCCCTATCTGTACGGCTCGGGCGTTATCCCGATGCGCTT
CGAGGAATTCAAGGACGGTATCAAGCGTCTCATCGTCAGCGAATTCTTCA
CCCGCGAACACATTGAGCGCTTCTTCACCAACAATGCCGCAACCGCCGCC
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