mRNA_P-wetherbeei_contig16088.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig16088.1.1 vs. uniprot
Match: A0A127EWV1_9HYPH (Nitrogen-fixing NifU domain-containing protein n=1 Tax=Rhodoplanes sp. Z2-YC6860 TaxID=674703 RepID=A0A127EWV1_9HYPH) HSP 1 Score: 263 bits (672), Expect = 1.740e-88 Identity = 132/147 (89.80%), Postives = 136/147 (92.52%), Query Frame = 1
Query: 1 MLNDVYNRRILELAGGIPRLGRLERPDASATAHSKLCGSTVTVDLKMDGDTVIDFAHDVKACALGQASSSIMAIHVVGSKADELRALRDTVRKMLKENGEPPKDGKWADIAVLEPVRDYKARHASTMLTFDAVVDAIGQIETKRRAA 441
MLN+VYNRRILELAGGIPRLGRL PDASATAHSKLCGSTVTVDLKMDGDTV DFAH+VKACALGQASSSIMA HVVGSKA ELR LRDTVRKMLKENG PPKDGKWADIAVLEPVRDYKARHAST+LTFDAVVDAIGQIE + A
Sbjct: 1 MLNEVYNRRILELAGGIPRLGRLSEPDASATAHSKLCGSTVTVDLKMDGDTVTDFAHEVKACALGQASSSIMASHVVGSKAAELRELRDTVRKMLKENGAPPKDGKWADIAVLEPVRDYKARHASTLLTFDAVVDAIGQIEKRNGKA 147
BLAST of mRNA_P-wetherbeei_contig16088.1.1 vs. uniprot
Match: Q6N4E6_RHOPA (Possible nifU homolog n=8 Tax=Proteobacteria TaxID=1224 RepID=Q6N4E6_RHOPA) HSP 1 Score: 252 bits (643), Expect = 4.890e-84 Identity = 126/147 (85.71%), Postives = 135/147 (91.84%), Query Frame = 1
Query: 1 MLNDVYNRRILELAGGIPRLGRLERPDASATAHSKLCGSTVTVDLKMDGDTVIDFAHDVKACALGQASSSIMAIHVVGSKADELRALRDTVRKMLKENGEPPKDGKWADIAVLEPVRDYKARHASTMLTFDAVVDAIGQIETKRRAA 441
MLNDVYN+RI+ELAG IPR+GRLERPDASATAHSKLCGSTVT+DLKMDGDTV DFAH VKACALGQASSSIMA HVVGS A EL+ALR+TVRKMLKENG PP DGKWADIA+LEPVRDYKARHAST+LTFDAVVDAIGQIE + A
Sbjct: 1 MLNDVYNKRIIELAGNIPRIGRLERPDASATAHSKLCGSTVTIDLKMDGDTVTDFAHIVKACALGQASSSIMASHVVGSTASELKALRETVRKMLKENGAPP-DGKWADIAMLEPVRDYKARHASTLLTFDAVVDAIGQIEAQNDGA 146
BLAST of mRNA_P-wetherbeei_contig16088.1.1 vs. uniprot
Match: UPI001BAAD3B0 (iron-sulfur cluster assembly scaffold protein n=1 Tax=Rhodopseudomonas sp. SK50-23 TaxID=340268 RepID=UPI001BAAD3B0) HSP 1 Score: 250 bits (639), Expect = 2.130e-83 Identity = 124/143 (86.71%), Postives = 129/143 (90.21%), Query Frame = 1
Query: 1 MLNDVYNRRILELAGGIPRLGRLERPDASATAHSKLCGSTVTVDLKMDGDTVIDFAHDVKACALGQASSSIMAIHVVGSKADELRALRDTVRKMLKENGEPPKDGKWADIAVLEPVRDYKARHASTMLTFDAVVDAIGQIETK 429
MLND+YN+RI+ELAG IPRLGRL PDASATAHSKLCGSTV VDL MDGD V DFAHDVKACALGQASSSIMA HVVGS ADELRALR+TVRKMLKENG PP D KWADIA LEPVRDYKARHAST+LTFDAVVDAIGQIE K
Sbjct: 1 MLNDIYNKRIIELAGNIPRLGRLTAPDASATAHSKLCGSTVKVDLAMDGDVVSDFAHDVKACALGQASSSIMAAHVVGSTADELRALRETVRKMLKENGAPPTDAKWADIAALEPVRDYKARHASTLLTFDAVVDAIGQIEAK 143
BLAST of mRNA_P-wetherbeei_contig16088.1.1 vs. uniprot
Match: A0A0N1C6N2_9BRAD (Nitrogen fixation protein NifU n=3 Tax=Rhodopseudomonas TaxID=1073 RepID=A0A0N1C6N2_9BRAD) HSP 1 Score: 250 bits (638), Expect = 2.830e-83 Identity = 124/148 (83.78%), Postives = 133/148 (89.86%), Query Frame = 1
Query: 1 MLNDVYNRRILELAGGIPRLGRLERPDASATAHSKLCGSTVTVDLKMDGDTVIDFAHDVKACALGQASSSIMAIHVVGSKADELRALRDTVRKMLKENGEPPKDGKWADIAVLEPVRDYKARHASTMLTFDAVVDAIGQIETKRRAAA 444
MLND+YN+RI+ELAG IPRLGRL PDA+ATAHSKLCGSTV VDLKMDGDTV DFAH+VKACALGQASSSIMA HVVGS A ELRALRD VR MLK++G PP DGKWADIAVLEPVRDYKARHAST+LTFDAVVDAIGQIE KR+ A
Sbjct: 1 MLNDIYNKRIIELAGNIPRLGRLPDPDATATAHSKLCGSTVKVDLKMDGDTVSDFAHEVKACALGQASSSIMASHVVGSTATELRALRDAVRAMLKDHGAPPADGKWADIAVLEPVRDYKARHASTLLTFDAVVDAIGQIEAKRQETA 148
BLAST of mRNA_P-wetherbeei_contig16088.1.1 vs. uniprot
Match: A0A163ZQG2_9BRAD (Iron-sulfur cluster assembly scaffold protein n=14 Tax=Bradyrhizobiaceae TaxID=41294 RepID=A0A163ZQG2_9BRAD) HSP 1 Score: 250 bits (638), Expect = 3.240e-83 Identity = 123/148 (83.11%), Postives = 131/148 (88.51%), Query Frame = 1
Query: 1 MLNDVYNRRILELAGGIPRLGRLERPDASATAHSKLCGSTVTVDLKMDGDTVIDFAHDVKACALGQASSSIMAIHVVGSKADELRALRDTVRKMLKENGEPPKDGKWADIAVLEPVRDYKARHASTMLTFDAVVDAIGQIETKRRAAA 444
MLND+YN+RI+ELAG IPRLGRL PDASATAHSKLCGSTV +DL MD D V DFAHDVKACALGQASSSIMA HVVGS A+ELRALR+TVRKMLKENG PP DGKWADIA+LEPVRDYKARHAST+LTFDAVVDAIGQIE K A
Sbjct: 1 MLNDIYNKRIIELAGNIPRLGRLPAPDASATAHSKLCGSTVKIDLVMDADVVTDFAHDVKACALGQASSSIMASHVVGSTAEELRALRETVRKMLKENGAPPSDGKWADIALLEPVRDYKARHASTLLTFDAVVDAIGQIEAKSNTGA 148
BLAST of mRNA_P-wetherbeei_contig16088.1.1 vs. uniprot
Match: A0A508STQ6_9BRAD (Iron-sulfur cluster assembly scaffold protein IscU n=8 Tax=Bradyrhizobium TaxID=374 RepID=A0A508STQ6_9BRAD) HSP 1 Score: 249 bits (637), Expect = 3.760e-83 Identity = 123/148 (83.11%), Postives = 133/148 (89.86%), Query Frame = 1
Query: 1 MLNDVYNRRILELAGGIPRLGRLERPDASATAHSKLCGSTVTVDLKMDGDTVIDFAHDVKACALGQASSSIMAIHVVGSKADELRALRDTVRKMLKENGEPPKDGKWADIAVLEPVRDYKARHASTMLTFDAVVDAIGQIETKRRAAA 444
MLND+YN+RI+ELAG IPRLGRL+ PDASATAHSKLCGSTV VDLKMDG V DFAHDVKACALGQASSSIMA HVVGS ADELR LR+TVRKMLK+NG+PP GKWADIA+LEPVRDYKARHAST+LTFDAVVDAIGQIE K + A
Sbjct: 1 MLNDIYNKRIIELAGNIPRLGRLKDPDASATAHSKLCGSTVKVDLKMDGGVVTDFAHDVKACALGQASSSIMASHVVGSSADELRDLRETVRKMLKDNGQPPAGGKWADIALLEPVRDYKARHASTLLTFDAVVDAIGQIEAKAKQPA 148
BLAST of mRNA_P-wetherbeei_contig16088.1.1 vs. uniprot
Match: A0A0S3PWN2_9BRAD (NifU_N domain-containing protein n=1 Tax=Variibacter gotjawalensis TaxID=1333996 RepID=A0A0S3PWN2_9BRAD) HSP 1 Score: 249 bits (635), Expect = 7.330e-83 Identity = 122/146 (83.56%), Postives = 132/146 (90.41%), Query Frame = 1
Query: 1 MLNDVYNRRILELAGGIPRLGRLERPDASATAHSKLCGSTVTVDLKMDGDTVIDFAHDVKACALGQASSSIMAIHVVGSKADELRALRDTVRKMLKENGEPPKDGKWADIAVLEPVRDYKARHASTMLTFDAVVDAIGQIETKRRA 438
MLND+YN +ILELAG IPR+GRLE PDASATAHSKLCGSTVT+DLKM+GD V DFAHDVKACALGQASSSIMA HVVG+KADELRALR+TVRKMLKENG PP G+W DI VLEPVRDYKARHAST+LTFDAVV AI QIE KR+A
Sbjct: 1 MLNDIYNAKILELAGNIPRIGRLESPDASATAHSKLCGSTVTIDLKMNGDEVTDFAHDVKACALGQASSSIMARHVVGAKADELRALRETVRKMLKENGSPPDGGRWEDIRVLEPVRDYKARHASTLLTFDAVVSAIDQIEAKRKA 146
BLAST of mRNA_P-wetherbeei_contig16088.1.1 vs. uniprot
Match: A0A6L5FGR2_9HYPH (Iron-sulfur cluster assembly scaffold protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A6L5FGR2_9HYPH) HSP 1 Score: 249 bits (635), Expect = 8.390e-83 Identity = 125/146 (85.62%), Postives = 131/146 (89.73%), Query Frame = 1
Query: 1 MLNDVYNRRILELAGGIPRLGRLERPDASATAHSKLCGSTVTVDLKMDGDTVIDFAHDVKACALGQASSSIMAIHVVGSKADELRALRDTVRKMLKENGEPPKDGKWADIAVLEPVRDYKARHASTMLTFDAVVDAIGQIETKRRA 438
MLNDVYN RILELAG IPRLGRL PDA+ATAHSKLCGSTVT+DLKMDGDTV DFAH VKACALGQASSSIMA HVVG+KA ELRALRD VRKMLKENG PP + +W DIAVLEPVRD+KARHASTMLTFDAVVDAI QIE KRRA
Sbjct: 1 MLNDVYNARILELAGNIPRLGRLAEPDATATAHSKLCGSTVTIDLKMDGDTVTDFAHAVKACALGQASSSIMARHVVGAKAGELRALRDGVRKMLKENGAPPANSEWGDIAVLEPVRDFKARHASTMLTFDAVVDAINQIEAKRRA 146
BLAST of mRNA_P-wetherbeei_contig16088.1.1 vs. uniprot
Match: A0A363TG47_9BRAD (Iron-sulfur cluster assembly scaffold protein n=1 Tax=Bradyrhizobiaceae bacterium TaxID=2072420 RepID=A0A363TG47_9BRAD) HSP 1 Score: 248 bits (634), Expect = 1.110e-82 Identity = 125/149 (83.89%), Postives = 133/149 (89.26%), Query Frame = 1
Query: 1 MLNDVYNRRILELAGGIPRLGRLERPDASATAHSKLCGSTVTVDLKMDGDTVIDFAHDVKACALGQASSSIMAIHVVGSKADELRALRDTVRKMLKENGEPPKDGKWADIAVLEPVRDYKARHASTMLTFDAVVDAIGQIETKRRAAAE 447
MLNDVYNRRILELAG IPR+GRL DA+ATAHSKLCGSTVTVDLKM GDTV DFAH+VKACALGQASSSIMA HVVGS A ELR LR+ VR+MLKENG PP +GKWADIAVLEPVRDYKARHAST+LTFDAVVDAIG+IE KR AAE
Sbjct: 1 MLNDVYNRRILELAGSIPRIGRLADADATATAHSKLCGSTVTVDLKMSGDTVTDFAHEVKACALGQASSSIMARHVVGSTAGELRQLREDVRRMLKENGPPPAEGKWADIAVLEPVRDYKARHASTLLTFDAVVDAIGRIEEKRAVAAE 149
BLAST of mRNA_P-wetherbeei_contig16088.1.1 vs. uniprot
Match: A0A371BD80_9HYPH (Iron-sulfur cluster assembly scaffold protein n=2 Tax=unclassified Pseudolabrys TaxID=2638514 RepID=A0A371BD80_9HYPH) HSP 1 Score: 248 bits (632), Expect = 2.250e-82 Identity = 120/149 (80.54%), Postives = 134/149 (89.93%), Query Frame = 1
Query: 1 MLNDVYNRRILELAGGIPRLGRLERPDASATAHSKLCGSTVTVDLKMDGDTVIDFAHDVKACALGQASSSIMAIHVVGSKADELRALRDTVRKMLKENGEPPKDGKWADIAVLEPVRDYKARHASTMLTFDAVVDAIGQIETKRRAAAE 447
MLNDVYN +IL LAG IPRLGRLE+PDA+ATAHSKLCGSTVT+DL +DGD V DFAHDVKACALGQASSSIMA H++GS + ELRALR+TVRKMLKENG PPKDGKWA+IA LEPVRDYKARHAST+LTFDAVV A+ +IE KR+ AAE
Sbjct: 1 MLNDVYNEKILNLAGNIPRLGRLEKPDATATAHSKLCGSTVTIDLTLDGDHVTDFAHDVKACALGQASSSIMARHIIGSTSAELRALRETVRKMLKENGAPPKDGKWAEIAYLEPVRDYKARHASTLLTFDAVVKAVDEIEAKRKQAAE 149 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig16088.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig16088.1.1 >prot_P-wetherbeei_contig16088.1.1 ID=prot_P-wetherbeei_contig16088.1.1|Name=mRNA_P-wetherbeei_contig16088.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=150bp MLNDVYNRRILELAGGIPRLGRLERPDASATAHSKLCGSTVTVDLKMDGDback to top mRNA from alignment at P-wetherbeei_contig16088:52..501+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig16088.1.1 ID=mRNA_P-wetherbeei_contig16088.1.1|Name=mRNA_P-wetherbeei_contig16088.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=450bp|location=Sequence derived from alignment at P-wetherbeei_contig16088:52..501+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig16088:52..501+ >mRNA_P-wetherbeei_contig16088.1.1 ID=mRNA_P-wetherbeei_contig16088.1.1|Name=mRNA_P-wetherbeei_contig16088.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=450bp|location=Sequence derived from alignment at P-wetherbeei_contig16088:52..501+ (Phaeothamnion wetherbeei SAG_119_79)back to top |