prot_P-wetherbeei_contig16029.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig16029.1.1
Unique Nameprot_P-wetherbeei_contig16029.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length179
Homology
BLAST of mRNA_P-wetherbeei_contig16029.1.1 vs. uniprot
Match: UPI0003B4737B (Rrf2 family transcriptional regulator n=1 Tax=Nevskia ramosa TaxID=64002 RepID=UPI0003B4737B)

HSP 1 Score: 193 bits (490), Expect = 1.200e-59
Identity = 101/170 (59.41%), Postives = 123/170 (72.35%), Query Frame = 0
Query:    1 MALYSTSVEYGLHCLLPLCAPDVQ-ASSQDLADFQGVSAAYVAKLFASLKRAGLVVALEGAGGGYRLARAATDISVLDVVQALEGDKPLFQCNEIRGNCAVFGGQPPAWANKGLCSVHAVMVEAEQQMRKVLAAHSLADLATRVSNKAPKAFPREVEAWFGARKAGRSRA 169
            MA    SVEYGLHCLL L APD   ASS+DLA+ QGVS ++VAK+F  L++AG+V A  G  GGYRLAR A  I+VLDVV A+EG KPLF C EIRG CA+F G+ PAW+ +G+CS+HAVM+ AEQ MR  LA+ +LADLAT V+ KAP   P E++ W   R A RS A
Sbjct:    1 MAHLGNSVEYGLHCLLWLSAPDAAPASSRDLAELQGVSPSFVAKIFPKLEKAGIVSASAGIHGGYRLARPAAKITVLDVVDAIEGHKPLFDCQEIRGRCAIFKGKAPAWSTQGVCSIHAVMLRAEQSMRAELASATLADLATTVARKAPTGLPSEIKVWLSGRMAARSEA 170          
BLAST of mRNA_P-wetherbeei_contig16029.1.1 vs. uniprot
Match: A0A329D006_9BURK (BadM/Rrf2 family transcriptional regulator n=4 Tax=Paraburkholderia TaxID=1822464 RepID=A0A329D006_9BURK)

HSP 1 Score: 192 bits (487), Expect = 2.740e-59
Identity = 100/169 (59.17%), Postives = 122/169 (72.19%), Query Frame = 0
Query:    1 MALYSTSVEYGLHCLLPLCAPDV---QASSQDLADFQGVSAAYVAKLFASLKRAGLVVALEGAGGGYRLARAATDISVLDVVQALEGDKPLFQCNEIRGNCAVFGGQPPAWANKGLCSVHAVMVEAEQQMRKVLAAHSLADLATRVSNKAPKAFPREVEAWFGARKAGR 166
            M+  ST VEYGLHCLL L  P      AS++DLA+ QGV   YVAKLF  L RAG+V A EG  GG+RLAR A +ISVLDVV A++G+K LF C EIR NCAVFG +PPAWA +G+CS+HAVM++AE++M + LAAHSLADLATR   KAP  +  +V  W G R + R
Sbjct:    1 MSHISTGVEYGLHCLLYLSDPAAGVSDASAKDLAELQGVPVEYVAKLFTKLSRAGIVAATEGVRGGFRLARPAAEISVLDVVNAIDGNKALFDCREIRANCAVFGDKPPAWATRGVCSIHAVMLDAEKRMTESLAAHSLADLATRTVQKAPATYGHQVVKWLGHRSSTR 169          
BLAST of mRNA_P-wetherbeei_contig16029.1.1 vs. uniprot
Match: UPI000D6443B5 (Rrf2 family transcriptional regulator n=1 Tax=Dyella sp. C11 TaxID=2126991 RepID=UPI000D6443B5)

HSP 1 Score: 189 bits (481), Expect = 2.300e-58
Identity = 99/168 (58.93%), Postives = 124/168 (73.81%), Query Frame = 0
Query:    1 MALYSTSVEYGLHCLLPLC-APDVQASSQDLADFQGVSAAYVAKLFASLKRAGLVVALEGAGGGYRLARAATDISVLDVVQALEGDKPLFQCNEIRGNCAVFGGQPPAWANKGLCSVHAVMVEAEQQMRKVLAAHSLADLATRVSNKAPKAFPREVEAWFGARKAGRS 167
            MA     VEYGLHCLL L  +PD +ASS+DLAD QG+S ++VAKLF  L++AG+V A EG  GGYRLAR A  ISVLDVV A+EG KPLF+C EIRG CAVFGG+PP+W+  G+CSVHAVM+ AEQ MR+ LA  +LA+LA     KAP+ F +++ +W   R A R+
Sbjct:    1 MAHLGNGVEYGLHCLLWLTGSPDERASSRDLADLQGISPSFVAKLFPRLEKAGIVEAGEGVRGGYRLARPAQRISVLDVVDAIEGPKPLFECQEIRGRCAVFGGKPPSWSTDGVCSVHAVMLRAEQAMRRELARTTLAELAAVAGKKAPEGFTQDIRSWLNDRWAART 168          
BLAST of mRNA_P-wetherbeei_contig16029.1.1 vs. uniprot
Match: A0A3L7DXM5_9GAMM (Rrf2 family transcriptional regulator n=1 Tax=Seongchinamella sediminis TaxID=2283635 RepID=A0A3L7DXM5_9GAMM)

HSP 1 Score: 188 bits (478), Expect = 5.600e-58
Identity = 94/173 (54.34%), Postives = 128/173 (73.99%), Query Frame = 0
Query:    1 MALYSTSVEYGLHCLLPLCAPDVQA--SSQDLADFQGVSAAYVAKLFASLKRAGLVVALEGAGGGYRLARAATDISVLDVVQALEGDKPLFQCNEIRGNCAVFGGQPPAWANKGLCSVHAVMVEAEQQMRKVLAAHSLADLATRVSNKAPKAFPREVEAWFGARKAGRSRAVR 171
            M+LY ++VEYGLHCLL L  PD+ A  S++DLA+FQGVS + VAKLF+ L++AG+V + EG  GGYRLA+AA+++SV+DV+ A+EGDKPLFQC +IR NC ++ G PP WA  G+CS+HAVM+EA+++M +    H+LA LA +V +K PK+       WF AR A R R  R
Sbjct:    1 MSLYGSNVEYGLHCLLFLAGPDMHAPVSAKDLAEFQGVSPSLVAKLFSQLQKAGIVASAEGIQGGYRLAKAASEVSVMDVILAVEGDKPLFQCKQIRRNCILYSGNPPDWATNGVCSIHAVMLEAQERMFETFRGHTLASLAQQVESKLPKSQSAAGREWFEARLAERRRGSR 173          
BLAST of mRNA_P-wetherbeei_contig16029.1.1 vs. uniprot
Match: A0A7G8Q3F9_9GAMM (Rrf2 family transcriptional regulator n=1 Tax=Dyella telluris TaxID=2763498 RepID=A0A7G8Q3F9_9GAMM)

HSP 1 Score: 188 bits (478), Expect = 6.560e-58
Identity = 99/168 (58.93%), Postives = 121/168 (72.02%), Query Frame = 0
Query:    1 MALYSTSVEYGLHCLLPLCAPDVQ-ASSQDLADFQGVSAAYVAKLFASLKRAGLVVALEGAGGGYRLARAATDISVLDVVQALEGDKPLFQCNEIRGNCAVFGGQPPAWANKGLCSVHAVMVEAEQQMRKVLAAHSLADLATRVSNKAPKAFPREVEAWFGARKAGRS 167
            MA     VEYGLHCLL L     + ASS+DLAD QG+SA++VAKLF  L++AGLV A  G  GGYRLAR A  ISVLDVV A+EG KPLF+C EIRG CAVFGG+PPAW+  G+C VHAVM+ AEQ MR+ LA  ++ADLA     KAP  F +++ +WF AR + R+
Sbjct:    1 MAHLGNGVEYGLHCLLWLTGSHAEPASSRDLADLQGISASFVAKLFPRLEKAGLVEATGGVRGGYRLARPADCISVLDVVDAIEGSKPLFECQEIRGRCAVFGGKPPAWSIDGVCGVHAVMLRAEQAMRRELARTTIADLAASTGKKAPDGFTQDIRSWFNARWSART 168          
BLAST of mRNA_P-wetherbeei_contig16029.1.1 vs. uniprot
Match: M4S702_9SPHN (Rrf2 family transcriptional regulator n=3 Tax=Sphingomonas TaxID=13687 RepID=M4S702_9SPHN)

HSP 1 Score: 186 bits (473), Expect = 2.920e-57
Identity = 94/175 (53.71%), Postives = 121/175 (69.14%), Query Frame = 0
Query:    1 MALYSTSVEYGLHCLLPLCAPDVQA-SSQDLADFQGVSAAYVAKLFASLKRAGLVVALEGAGGGYRLARAATDISVLDVVQALEGDKPLFQCNEIRGNCAVFGGQPPAWANKGLCSVHAVMVEAEQQMRKVLAAHSLADLATRVSNKAPKAFPREVEAWFGARKAGRSRAVRRIT 174
            MA  + SVEYG+HCLL L   D Q  S +DLA+FQG+S ++V K+F  L +AG+V A+EG  GGY LARA   IS+L +V A+EG  PLF C +IRG CA+FG +PP WA  G CS+HAVM++AE+ MR +LAA+SLAD+   V+ KAP  FP EV  WFG R   R+R    +T
Sbjct:    1 MAHLTASVEYGIHCLLWLAGTDDQPRSGRDLAEFQGISPSFVTKIFGKLGKAGIVRAVEGVRGGYLLARAPEQISILQIVDAVEGANPLFACQDIRGRCAIFGARPPGWATNGTCSIHAVMLKAEKAMRDMLAAYSLADIGQAVTRKAPAGFPEEVNGWFGDRLDARTRKAGEVT 175          
BLAST of mRNA_P-wetherbeei_contig16029.1.1 vs. uniprot
Match: A0A0Q8R514_9SPHN (Transcriptional regulator n=1 Tax=Sphingomonas sp. Root720 TaxID=1736595 RepID=A0A0Q8R514_9SPHN)

HSP 1 Score: 186 bits (473), Expect = 3.020e-57
Identity = 96/168 (57.14%), Postives = 121/168 (72.02%), Query Frame = 0
Query:    1 MALYSTSVEYGLHCLLPLC-APDVQASSQDLADFQGVSAAYVAKLFASLKRAGLVVALEGAGGGYRLARAATDISVLDVVQALEGDKPLFQCNEIRGNCAVFGGQPPAWANKGLCSVHAVMVEAEQQMRKVLAAHSLADLATRVSNKAPKAFPREVEAWFGARKAGRS 167
            MA  +TSVEYG+HCLL L  + D   SS+DLA+ QGVS ++VAK+F  L++AGLV A EG  GGYRLAR A  IS LD+V A+EGDKPLF C E+RG CA+F G  P+WA  G+C+VH VM++AE+ MR  LA+ SL D+ATR   K P  F  +VEAW G R +GR+
Sbjct:    1 MAHITTSVEYGIHCLLWLVESSDRALSSRDLAELQGVSPSFVAKIFPKLEKAGLVAASEGVRGGYRLARPADQISFLDIVDAIEGDKPLFDCQEVRGRCALFAGGAPSWATDGVCAVHGVMLQAEKAMRDALASQSLMDVATRFGRKVPDGFFGDVEAWLGGRMSGRT 168          
BLAST of mRNA_P-wetherbeei_contig16029.1.1 vs. uniprot
Match: A0A0S4LAF3_9BACT (BadM/Rrf2 family transcriptional regulator n=1 Tax=Candidatus Nitrospira nitrificans TaxID=1742973 RepID=A0A0S4LAF3_9BACT)

HSP 1 Score: 186 bits (472), Expect = 3.770e-57
Identity = 97/161 (60.25%), Postives = 118/161 (73.29%), Query Frame = 0
Query:    1 MALYSTSVEYGLHCLLPLC--APDVQASSQDLADFQGVSAAYVAKLFASLKRAGLVVALEGAGGGYRLARAATDISVLDVVQALEGDKPLFQCNEIRGNCAVFGGQPPAWANKGLCSVHAVMVEAEQQMRKVLAAHSLADLATRVSNKAPKAFPREVEAWF 159
            MALY++ VEYGLHCLL L   +  V+A+  DLA  QG+S  +VAKLF  +KR GLV A EGAGGGY LAR   +I+V D V ALEG K LF+C E+R NCA+F   PPAWA KG+CS+HAVM EAE++MR+ L A++LADLA +V  KAPK F  EV AWF
Sbjct:    1 MALYASRVEYGLHCLLFLVGRSGSVKANVADLAKLQGISPTFVAKLFTKMKRGGLVTASEGAGGGYMLARPPEEITVWDAVAALEGSKALFKCTEVRLNCALFDASPPAWAKKGVCSIHAVMQEAERRMRQTLDAYTLADLAQQVERKAPKEFLNEVNAWF 161          
BLAST of mRNA_P-wetherbeei_contig16029.1.1 vs. uniprot
Match: A0A330L5B0_9BACT (Transcriptional regulator, BadM/Rrf2 family n=1 Tax=Nitrospira lenta TaxID=1436998 RepID=A0A330L5B0_9BACT)

HSP 1 Score: 186 bits (471), Expect = 3.880e-57
Identity = 99/161 (61.49%), Postives = 119/161 (73.91%), Query Frame = 0
Query:    1 MALYSTSVEYGLHCLLPLCAPD--VQASSQDLADFQGVSAAYVAKLFASLKRAGLVVALEGAGGGYRLARAATDISVLDVVQALEGDKPLFQCNEIRGNCAVFGGQPPAWANKGLCSVHAVMVEAEQQMRKVLAAHSLADLATRVSNKAPKAFPREVEAWF 159
            MALY++SVEYGLHCLL L       + S  DLA  QG+S ++VAKLF  LK+AGLV+A EGAGGGY LAR A  I+V +VV+ALEG K LF+C EIR +CA+FG  PPAWA KG+CS+ AVM EAE +MR+ L AH+LADLA+RV  KAP  F   V AWF
Sbjct:    1 MALYASSVEYGLHCLLFLVGRSGPAKTSVADLAQLQGLSPSFVAKLFTKLKKAGLVIANEGAGGGYELARPAERITVWNVVEALEGKKALFKCTEIRQSCALFGSSPPAWATKGVCSIQAVMQEAEGRMRETLRAHTLADLASRVERKAPNEFLVGVNAWF 161          
BLAST of mRNA_P-wetherbeei_contig16029.1.1 vs. uniprot
Match: A0A1N7RP21_9BURK (Putative Rrf2 family protein, transcriptional regulator n=2 Tax=Paraburkholderia TaxID=1822464 RepID=A0A1N7RP21_9BURK)

HSP 1 Score: 186 bits (471), Expect = 7.110e-57
Identity = 101/172 (58.72%), Postives = 122/172 (70.93%), Query Frame = 0
Query:    1 MALYSTSVEYGLHCLLPLC--APD--VQASSQDLADFQGVSAAYVAKLFASLKRAGLVVALEGAGGGYRLARAATDISVLDVVQALEGDKPLFQCNEIRGNCAVFGGQPPAWANKGLCSVHAVMVEAEQQMRKVLAAHSLADLATRVSNKAPKAFPREVEAWFGARKAGRSR 168
            M+  S  VEYGLHCLL L   AP    +AS +DLA+ QGV A YVAKLF  L +AGLV+A EGA GG+ LAR A  ISVLDVV A++GDKPLF+C E+R  CAVFGG  P WA+ G+CS+HAVM  AE++MR+ LA+ SL+DLATR S KAP+ F  +V  W   R  GR R
Sbjct:    1 MSHISAGVEYGLHCLLYLTEQAPGGVSEASVRDLAELQGVPADYVAKLFTKLHKAGLVIATEGAKGGFALARPANQISVLDVVTAIDGDKPLFECREVRTRCAVFGGTAPTWASSGVCSIHAVMQNAEKRMREALASQSLSDLATRTSAKAPRTFGPQVVKWLEGRATGRRR 172          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig16029.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI0003B4737B1.200e-5959.41Rrf2 family transcriptional regulator n=1 Tax=Nevs... [more]
A0A329D006_9BURK2.740e-5959.17BadM/Rrf2 family transcriptional regulator n=4 Tax... [more]
UPI000D6443B52.300e-5858.93Rrf2 family transcriptional regulator n=1 Tax=Dyel... [more]
A0A3L7DXM5_9GAMM5.600e-5854.34Rrf2 family transcriptional regulator n=1 Tax=Seon... [more]
A0A7G8Q3F9_9GAMM6.560e-5858.93Rrf2 family transcriptional regulator n=1 Tax=Dyel... [more]
M4S702_9SPHN2.920e-5753.71Rrf2 family transcriptional regulator n=3 Tax=Sphi... [more]
A0A0Q8R514_9SPHN3.020e-5757.14Transcriptional regulator n=1 Tax=Sphingomonas sp.... [more]
A0A0S4LAF3_9BACT3.770e-5760.25BadM/Rrf2 family transcriptional regulator n=1 Tax... [more]
A0A330L5B0_9BACT3.880e-5761.49Transcriptional regulator, BadM/Rrf2 family n=1 Ta... [more]
A0A1N7RP21_9BURK7.110e-5758.72Putative Rrf2 family protein, transcriptional regu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 2..148
e-value: 3.2E-37
score: 129.6
IPR000944Transcription regulator Rrf2PFAMPF02082Rrf2coord: 5..141
e-value: 4.1E-34
score: 117.6
IPR000944Transcription regulator Rrf2TIGRFAMTIGR00738TIGR00738coord: 4..140
e-value: 3.6E-29
score: 99.3
IPR000944Transcription regulator Rrf2PANTHERPTHR33221WINGED HELIX-TURN-HELIX TRANSCRIPTIONAL REGULATOR, RRF2 FAMILYcoord: 1..151
IPR000944Transcription regulator Rrf2PROSITEPS51197HTH_RRF2_2coord: 3..141
score: 37.57225
NoneNo IPR availablePANTHERPTHR33221:SF13TRANSCRIPTIONAL REGULATOR-RELATEDcoord: 1..151
IPR030489Transcription regulator Rrf2-type, conserved sitePROSITEPS01332HTH_RRF2_1coord: 48..66
IPR036390Winged helix DNA-binding domain superfamilySUPERFAMILY46785"Winged helix" DNA-binding domaincoord: 7..139

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig16029contigP-wetherbeei_contig16029:507..1043 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig16029.1.1mRNA_P-wetherbeei_contig16029.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig16029 507..1043 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig16029.1.1 ID=prot_P-wetherbeei_contig16029.1.1|Name=mRNA_P-wetherbeei_contig16029.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=179bp
MALYSTSVEYGLHCLLPLCAPDVQASSQDLADFQGVSAAYVAKLFASLKR
AGLVVALEGAGGGYRLARAATDISVLDVVQALEGDKPLFQCNEIRGNCAV
FGGQPPAWANKGLCSVHAVMVEAEQQMRKVLAAHSLADLATRVSNKAPKA
FPREVEAWFGARKAGRSRAVRRITPGEK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036388WH-like_DNA-bd_sf
IPR000944Tscrpt_reg_Rrf2
IPR030489TR_Rrf2-type_CS
IPR036390WH_DNA-bd_sf