mRNA_P-wetherbeei_contig15885.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig15885.1.1
Unique NamemRNA_P-wetherbeei_contig15885.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig15885.1.1 vs. uniprot
Match: A0A7K1BC87_9ACTN (SDR family oxidoreductase n=2 Tax=root TaxID=1 RepID=A0A7K1BC87_9ACTN)

HSP 1 Score: 395 bits (1016), Expect = 2.560e-137
Identity = 201/261 (77.01%), Postives = 222/261 (85.06%), Query Frame = 1
Query:    1 MSSALFDLHGHVALVTGGNSGIGLGMADALAAQGASVAIWGTNADKNAAAAEQLRAHGGQVLDLVCDVGDQGAVISGMAEVVASLGRVDSCFVNAGVSGKAPSFVGMTDDEWHRVLRVNLDGAFYTAQEAVKHMVQRHDAGDTAGGSIVFTSSGSAFFGAQRGQHYASSKGAVISMMKGIAVEHARHGVRCNALIPGWIESDMTAPAFGWDKFVDNVMPRLPARRWGVGADFGGIAVYLASAASSYHTADAITIDGGYYSF 783
            M++ LFDL GHVALVTGGNSGIGLGMA+ LAA GA+VAIWGTN DKN AAA +LR +GG VLDLVCDVGDQ AV+  MA  V +LGRVDSCFVNAGV GKAPSFVGMTD+EWHRVLRVNLDGAFYTAQEAVK MV + D     GGS+VFT+SGSA+FG Q+GQHY  SKGAVISMMKGIAVEHARHG+RCNA++PGWIESDMTA A GWDKFV NV+PR+P RRWG   DF  +AVYLASAAS YHT D ITIDGGY+SF
Sbjct:    1 MTTRLFDLTGHVALVTGGNSGIGLGMAEGLAAHGATVAIWGTNPDKNTAAAARLREYGGTVLDLVCDVGDQQAVVESMAATVQALGRVDSCFVNAGVGGKAPSFVGMTDEEWHRVLRVNLDGAFYTAQEAVKQMVAQGD-----GGSVVFTTSGSAYFGQQKGQHYGGSKGAVISMMKGIAVEHARHGIRCNAILPGWIESDMTAGALGWDKFVANVLPRVPMRRWGKPEDFSALAVYLASAASGYHTGDVITIDGGYHSF 256          
BLAST of mRNA_P-wetherbeei_contig15885.1.1 vs. uniprot
Match: A0A6N2DRH6_9ACTN (SDR family oxidoreductase n=1 Tax=Ilumatobacter sp. TaxID=1967498 RepID=A0A6N2DRH6_9ACTN)

HSP 1 Score: 362 bits (928), Expect = 1.370e-123
Identity = 178/256 (69.53%), Postives = 209/256 (81.64%), Query Frame = 1
Query:   16 FDLHGHVALVTGGNSGIGLGMADALAAQGASVAIWGTNADKNAAAAEQLRAHGGQVLDLVCDVGDQGAVISGMAEVVASLGRVDSCFVNAGVSGKAPSFVGMTDDEWHRVLRVNLDGAFYTAQEAVKHMVQRHDAGDTAGGSIVFTSSGSAFFGAQRGQHYASSKGAVISMMKGIAVEHARHGVRCNALIPGWIESDMTAPAFGWDKFVDNVMPRLPARRWGVGADFGGIAVYLASAASSYHTADAITIDGGYYSF 783
            FDL GHVALVTGGNSGIGLGMA+ALA  G+ V IWGTN DKN AAA++L  HG  V+ +VCDVGD+ AV +  AE V   GR+DSCFVNAGV G+APSFVGMT DEW RV+RVNLDGAF+TA+   +HMV+R+  GD  GGS+VFT+SGSA +G QRGQHY +SK  +ISMMK IAVEHARHG+R NA++PGWIESDMTA AFGW+ FV+ V+PR+P RRWG  +DFGG+AVYLAS AS YHT D ITIDGGY+SF
Sbjct:   23 FDLTGHVALVTGGNSGIGLGMAEALALHGSRVCIWGTNPDKNDAAADRLATHGVDVVSIVCDVGDEDAVEAATAETVEQFGRIDSCFVNAGVGGQAPSFVGMTTDEWRRVMRVNLDGAFFTARAVTRHMVERYGDGDRRGGSLVFTTSGSALYGQQRGQHYGASKAGLISMMKAIAVEHARHGIRSNAVLPGWIESDMTAGAFGWETFVERVLPRVPLRRWGDPSDFGGLAVYLASTASGYHTGDVITIDGGYHSF 278          
BLAST of mRNA_P-wetherbeei_contig15885.1.1 vs. uniprot
Match: A0A7Y1ZTM7_9ACTN (SDR family oxidoreductase n=1 Tax=Ilumatobacter sp. TaxID=1967498 RepID=A0A7Y1ZTM7_9ACTN)

HSP 1 Score: 345 bits (886), Expect = 2.050e-117
Identity = 176/256 (68.75%), Postives = 201/256 (78.52%), Query Frame = 1
Query:   16 FDLHGHVALVTGGNSGIGLGMADALAAQGASVAIWGTNADKNAAAAEQLRAHGGQVLDLVCDVGDQGAVISGMAEVVASLGRVDSCFVNAGVSGKAPSFVGMTDDEWHRVLRVNLDGAFYTAQEAVKHMVQRHDAGDTAGGSIVFTSSGSAFFGAQRGQHYASSKGAVISMMKGIAVEHARHGVRCNALIPGWIESDMTAPAFGWDKFVDNVMPRLPARRWGVGADFGGIAVYLASAASSYHTADAITIDGGYYSF 783
            FDL G VALVTGGNSGIGLGMAD LAA GA VAIWGTN DKN  A EQL  +  ++L +VCDV D+ AV+  MAE V  LGR+DS FVNAGV G A SF+ MT +EW RV+ VNLDGAFYTA+EA KHMV RH+ GD  GGSIVFTSSGSA FGA  GQHY ++K  V +MM+GIAV HARHG+RCN+++PGWIESDMTA AF WD FV  VMPR+P RRWG   DF GIAVYLAS+AS+YHT D I IDGG++SF
Sbjct:    9 FDLTGSVALVTGGNSGIGLGMADGLAAHGADVAIWGTNPDKNERAIEQLGKYDVELLSVVCDVSDEAAVVDAMAETVDELGRIDSVFVNAGVGGGARSFLEMTSEEWRRVMSVNLDGAFYTAREAAKHMVARHEDGDPTGGSIVFTSSGSAEFGAAAGQHYGATKAGVNAMMRGIAVAHARHGIRCNSILPGWIESDMTAGAFEWDTFVKKVMPRIPTRRWGTREDFAGIAVYLASSASTYHTGDIIRIDGGFHSF 264          
BLAST of mRNA_P-wetherbeei_contig15885.1.1 vs. uniprot
Match: A0A6J6GT85_9ZZZZ (Unannotated protein n=2 Tax=root TaxID=1 RepID=A0A6J6GT85_9ZZZZ)

HSP 1 Score: 341 bits (875), Expect = 1.460e-115
Identity = 175/257 (68.09%), Postives = 200/257 (77.82%), Query Frame = 1
Query:   13 LFDLHGHVALVTGGNSGIGLGMADALAAQGASVAIWGTNADKNAAAAEQLRAHGGQVLDLVCDVGDQGAVISGMAEVVASLGRVDSCFVNAGVSGKAPSFVGMTDDEWHRVLRVNLDGAFYTAQEAVKHMVQRHDAGDTAGGSIVFTSSGSAFFGAQRGQHYASSKGAVISMMKGIAVEHARHGVRCNALIPGWIESDMTAPAFGWDKFVDNVMPRLPARRWGVGADFGGIAVYLASAASSYHTADAITIDGGYYSF 783
            +FDLHG VALVTGGN GIGLGMA  LA++G  +AIWGTNA KNA A  +L A G +V D +CDVGDQ  V +  A  V +LGRVDSCFVNAGV G A SFV MTDDEWHRV+RVNLDGAFYTAQ AV+HMV    AG+  GG++VFT+SGSA++G  RGQHY +SK  VISMMK IAVEHARHG+RCNA++PGWIESDMT  A GWD F+  V+PR+P RRWG   DF GIA Y AS AS YHT D ITIDGGY+SF
Sbjct:   25 IFDLHGKVALVTGGNGGIGLGMARGLASRGCDIAIWGTNASKNATARAELEAMGVRVADFICDVGDQEQVKASFAATVEALGRVDSCFVNAGVGGHAESFVSMTDDEWHRVMRVNLDGAFYTAQVAVQHMVA---AGN--GGAVVFTTSGSAYYGQARGQHYGASKAGVISMMKAIAVEHARHGIRCNAILPGWIESDMTQAALGWDTFIAKVLPRVPMRRWGDPNDFSGIAAYFASDASKYHTGDVITIDGGYHSF 276          
BLAST of mRNA_P-wetherbeei_contig15885.1.1 vs. uniprot
Match: A0A6I3GSV3_9ACTN (SDR family oxidoreductase n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A6I3GSV3_9ACTN)

HSP 1 Score: 338 bits (868), Expect = 8.200e-115
Identity = 175/257 (68.09%), Postives = 202/257 (78.60%), Query Frame = 1
Query:   13 LFDLHGHVALVTGGNSGIGLGMADALAAQGASVAIWGTNADKNAAAAEQLRAHGGQVLDLVCDVGDQGAVISGMAEVVASLGRVDSCFVNAGVSGKAPSFVGMTDDEWHRVLRVNLDGAFYTAQEAVKHMVQRHDAGDTAGGSIVFTSSGSAFFGAQRGQHYASSKGAVISMMKGIAVEHARHGVRCNALIPGWIESDMTAPAFGWDKFVDNVMPRLPARRWGVGADFGGIAVYLASAASSYHTADAITIDGGYYSF 783
            +F+L G VAL+TGGN GIGLGMA  LA++GA +AIWGTNADKN AA  ++ A G +V D +CDVGDQ  V +  A  + +LGRVDSCFVNAGV G+A SFV MTDDEWHRVLRVNLDGAFYTAQ AV+ MV    AG   GGS+VFT+SGSA+FG QRGQHY +SK  VISMM+ IAVEHARHG+R NA++PGWIES+MTAPA GW  FV+ VMPR+P RRWG   DF GIA Y AS AS YHT D ITIDGGY+SF
Sbjct:    4 IFNLAGKVALITGGNGGIGLGMARGLASRGADIAIWGTNADKNRAARAEIEAMGVRVADFICDVGDQTQVEASFAATLEALGRVDSCFVNAGVGGQAESFVSMTDDEWHRVLRVNLDGAFYTAQVAVRSMVA---AG--TGGSVVFTTSGSAYFGQQRGQHYGASKAGVISMMRAIAVEHARHGIRSNAVLPGWIESEMTAPALGWSTFVEKVMPRIPMRRWGDPNDFSGIAAYFASDASKYHTGDVITIDGGYHSF 255          
BLAST of mRNA_P-wetherbeei_contig15885.1.1 vs. uniprot
Match: A0A6J7EMW7_9ZZZZ (Unannotated protein n=2 Tax=root TaxID=1 RepID=A0A6J7EMW7_9ZZZZ)

HSP 1 Score: 338 bits (866), Expect = 2.030e-114
Identity = 172/256 (67.19%), Postives = 200/256 (78.12%), Query Frame = 1
Query:   16 FDLHGHVALVTGGNSGIGLGMADALAAQGASVAIWGTNADKNAAAAEQLRAHGGQVLDLVCDVGDQGAVISGMAEVVASLGRVDSCFVNAGVSGKAPSFVGMTDDEWHRVLRVNLDGAFYTAQEAVKHMVQRHDAGDTAGGSIVFTSSGSAFFGAQRGQHYASSKGAVISMMKGIAVEHARHGVRCNALIPGWIESDMTAPAFGWDKFVDNVMPRLPARRWGVGADFGGIAVYLASAASSYHTADAITIDGGYYSF 783
            FDL G VAL+TGGNSGIGLGMA+ALAA GA VAIWGTN  KN AA  +L  HG +VLDL+CDVGDQ  V+  M   V  LGRVDS FVN+GV  KAPSF+  + DEW RV+RVNLDGAF+TAQEAV+HMV R D     GGS+VF +SGSAFFG Q GQ Y +SK  +I+MMKGIAVEHARHG+R NA++PGW+ESD+TAPAF WD FV  V PR+P RRWG  +D GG+AVY AS ASS+HT D +TIDGGY+SF
Sbjct:   11 FDLSGRVALITGGNSGIGLGMANALAAHGADVAIWGTNPHKNRAARAELLQHGHRVLDLICDVGDQQQVVEAMHSTVEGLGRVDSVFVNSGVGSKAPSFLETSADEWRRVMRVNLDGAFFTAQEAVRHMVGRGD-----GGSVVFITSGSAFFGQQAGQSYGASKAGLIAMMKGIAVEHARHGIRANAILPGWVESDLTAPAFNWDTFVAKVKPRVPMRRWGKPSDLGGMAVYFASEASSWHTGDVVTIDGGYHSF 261          
BLAST of mRNA_P-wetherbeei_contig15885.1.1 vs. uniprot
Match: A0A2E3TUQ7_9ACTN (2-deoxy-D-gluconate 3-dehydrogenase n=1 Tax=Ilumatobacter sp. TaxID=1967498 RepID=A0A2E3TUQ7_9ACTN)

HSP 1 Score: 335 bits (858), Expect = 3.710e-113
Identity = 168/259 (64.86%), Postives = 205/259 (79.15%), Query Frame = 1
Query:    7 SALFDLHGHVALVTGGNSGIGLGMADALAAQGASVAIWGTNADKNAAAAEQLRAHGGQVLDLVCDVGDQGAVISGMAEVVASLGRVDSCFVNAGVSGKAPSFVGMTDDEWHRVLRVNLDGAFYTAQEAVKHMVQRHDAGDTAGGSIVFTSSGSAFFGAQRGQHYASSKGAVISMMKGIAVEHARHGVRCNALIPGWIESDMTAPAFGWDKFVDNVMPRLPARRWGVGADFGGIAVYLASAASSYHTADAITIDGGYYSF 783
            S+ FDL G VALVTGGNSGIGLGMA+ LAA GA VAIWGTN+ K+  A + L  +  ++L ++CDV D+ AV+  MA+    LGR+D+ FVNAGVSG +PSF+ MT ++W RV+ VNLDGAFYTA+EA KHMV R++ GDTAGGSIVFTSSGS+ FGA  GQ Y ++K  V +MM+GIAV HARHG+RCN+++PGWIESDMTAPAF +D FV  VMPR+PARRWG   DF GIA YLAS+ASSYHT D I IDGG++SF
Sbjct:    6 SSPFDLTGRVALVTGGNSGIGLGMAEGLAAHGADVAIWGTNSAKSERAIDVLSQYDVELLSIICDVSDERAVVQSMADTADELGRIDAVFVNAGVSGSSPSFLEMTSEDWRRVMSVNLDGAFYTAREATKHMVARYEEGDTAGGSIVFTSSGSSEFGAASGQAYGATKAGVNAMMRGIAVAHARHGIRCNSILPGWIESDMTAPAFSYDTFVQKVMPRIPARRWGEKEDFAGIAAYLASSASSYHTGDIIRIDGGFHSF 264          
BLAST of mRNA_P-wetherbeei_contig15885.1.1 vs. uniprot
Match: A0A3N5K727_9ACTN (SDR family oxidoreductase (Fragment) n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A3N5K727_9ACTN)

HSP 1 Score: 334 bits (857), Expect = 3.860e-113
Identity = 170/254 (66.93%), Postives = 198/254 (77.95%), Query Frame = 1
Query:   13 LFDLHGHVALVTGGNSGIGLGMADALAAQGASVAIWGTNADKNAAAAEQLRAHGGQVLDLVCDVGDQGAVISGMAEVVASLGRVDSCFVNAGVSGKAPSFVGMTDDEWHRVLRVNLDGAFYTAQEAVKHMVQRHDAGDTAGGSIVFTSSGSAFFGAQRGQHYASSKGAVISMMKGIAVEHARHGVRCNALIPGWIESDMTAPAFGWDKFVDNVMPRLPARRWGVGADFGGIAVYLASAASSYHTADAITIDGGY 774
            LFDL GHVALVTGGNSGIGLGMAD LAAQGA VA+WGTN  KN AAAEQL  HG +VL L CDVGD+ AV +  A  V +LG+VDSCF NAG+ G   +FV +T DEWHRVLRVNLDG FYT + AV+HMV+R +     GGS+  T+SGS   GA R + YAS+KGAVI++MKGIAVEHARHG+R NA++P WIE+ MTAPA GWDKFVD V+PR+P RRWG G DF G+AVYLAS AS YHT D + +DGGY
Sbjct:    4 LFDLTGHVALVTGGNSGIGLGMADGLAAQGADVAVWGTNEAKNEAAAEQLSRHGTKVLALKCDVGDEAAVEASFAATVDTLGKVDSCFANAGIGGNNSAFVDLTADEWHRVLRVNLDGVFYTWRAAVRHMVERGE-----GGSLAVTTSGSTMMGAPRNEPYASAKGAVIALMKGIAVEHARHGIRANAILPCWIETPMTAPAMGWDKFVDKVLPRVPLRRWGTGDDFAGVAVYLASDASRYHTGDVLILDGGY 252          
BLAST of mRNA_P-wetherbeei_contig15885.1.1 vs. uniprot
Match: A0A6L6CFJ0_9ACTN (SDR family oxidoreductase n=6 Tax=root TaxID=1 RepID=A0A6L6CFJ0_9ACTN)

HSP 1 Score: 332 bits (852), Expect = 2.220e-112
Identity = 171/257 (66.54%), Postives = 201/257 (78.21%), Query Frame = 1
Query:   13 LFDLHGHVALVTGGNSGIGLGMADALAAQGASVAIWGTNADKNAAAAEQLRAHGGQVLDLVCDVGDQGAVISGMAEVVASLGRVDSCFVNAGVSGKAPSFVGMTDDEWHRVLRVNLDGAFYTAQEAVKHMVQRHDAGDTAGGSIVFTSSGSAFFGAQRGQHYASSKGAVISMMKGIAVEHARHGVRCNALIPGWIESDMTAPAFGWDKFVDNVMPRLPARRWGVGADFGGIAVYLASAASSYHTADAITIDGGYYSF 783
            +FDL G VALVTGGN GIGLGMA  LA++GAS+AIWGTNA+KN +A  ++ A G +V D +CDVGD+  VI+  A  +     VDSCFVNAGV G A SFV MTDDEWHRV+RVNLDGAFYTAQ A +HMV    AG+  GGS+VFT+SGSA+FG QRGQHY +SK  +ISMM+ IAVEHARHG+R NA++PGWI S+MTAPA GWDKF + V+PR+P RRWG   DF GIA YLAS AS YHT D ITIDGGY+SF
Sbjct:    4 IFDLSGKVALVTGGNGGIGLGMARGLASRGASIAIWGTNAEKNRSARAEIEAMGVRVADFICDVGDKKQVIASFAATLEVFEHVDSCFVNAGVGGAAESFVTMTDDEWHRVMRVNLDGAFYTAQTATQHMVA---AGN--GGSLVFTTSGSAYFGQQRGQHYGASKAGLISMMRAIAVEHARHGIRSNAVLPGWIMSEMTAPALGWDKFAEKVLPRVPMRRWGDPDDFSGIAAYLASDASKYHTGDVITIDGGYHSF 255          
BLAST of mRNA_P-wetherbeei_contig15885.1.1 vs. uniprot
Match: A0A7K1ELL6_9ACTN (SDR family oxidoreductase n=2 Tax=root TaxID=1 RepID=A0A7K1ELL6_9ACTN)

HSP 1 Score: 332 bits (850), Expect = 4.480e-112
Identity = 173/258 (67.05%), Postives = 199/258 (77.13%), Query Frame = 1
Query:   13 LFDLHGHVALVTGGNSGIGLGMADALAAQGASVAIWGTNADKNAAAAEQLRAHGGQVLDLVCDVGDQGAVISGMAEVVASLGRVDSCFVNAGVSGKAPSFVGMTDDEWHRVLRVNLDGAFYTAQEAVKHMV-QRHDAGDTAGGSIVFTSSGSAFFGAQRGQHYASSKGAVISMMKGIAVEHARHGVRCNALIPGWIESDMTAPAFGWDKFVDNVMPRLPARRWGVGADFGGIAVYLASAASSYHTADAITIDGGYYSF 783
            +FDL G VAL+TGGN GIGLGMA  LA  GA +AIWGTNA KN AA  +L   G +V+D VCDVGDQ  V +  A+ + + G VD+CFVNAGV GKA SF  MTDDEWHRV+RVNLDGAFYTAQ AV+ MV Q H      GGS+VFT+SGSA+FG QRGQHY +SK  +ISMM+ IAVEHARHG+R NA++PGWIES+MTAPA GWDKFV NV+PR+P RRWG   DF GIA YLAS  S YHT D ITIDGGY+SF
Sbjct:    4 MFDLAGKVALITGGNGGIGLGMARGLAQCGADLAIWGTNAHKNQAARAELETFGVRVVDYVCDVGDQEQVETVFAQTLEAFGHVDACFVNAGVGGKAESFATMTDDEWHRVMRVNLDGAFYTAQVAVRAMVAQGH------GGSLVFTTSGSAYFGQQRGQHYGASKAGLISMMRAIAVEHARHGIRSNAILPGWIESEMTAPALGWDKFVANVLPRVPMRRWGDPNDFSGIAAYLASDLSKYHTGDVITIDGGYHSF 255          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig15885.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7K1BC87_9ACTN2.560e-13777.01SDR family oxidoreductase n=2 Tax=root TaxID=1 Rep... [more]
A0A6N2DRH6_9ACTN1.370e-12369.53SDR family oxidoreductase n=1 Tax=Ilumatobacter sp... [more]
A0A7Y1ZTM7_9ACTN2.050e-11768.75SDR family oxidoreductase n=1 Tax=Ilumatobacter sp... [more]
A0A6J6GT85_9ZZZZ1.460e-11568.09Unannotated protein n=2 Tax=root TaxID=1 RepID=A0A... [more]
A0A6I3GSV3_9ACTN8.200e-11568.09SDR family oxidoreductase n=1 Tax=Actinomycetia ba... [more]
A0A6J7EMW7_9ZZZZ2.030e-11467.19Unannotated protein n=2 Tax=root TaxID=1 RepID=A0A... [more]
A0A2E3TUQ7_9ACTN3.710e-11364.862-deoxy-D-gluconate 3-dehydrogenase n=1 Tax=Ilumat... [more]
A0A3N5K727_9ACTN3.860e-11366.93SDR family oxidoreductase (Fragment) n=1 Tax=Actin... [more]
A0A6L6CFJ0_9ACTN2.220e-11266.54SDR family oxidoreductase n=6 Tax=root TaxID=1 Rep... [more]
A0A7K1ELL6_9ACTN4.480e-11267.05SDR family oxidoreductase n=2 Tax=root TaxID=1 Rep... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig15885contigP-wetherbeei_contig15885:181..966 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog402881.Plav_0764
Preferred nameMA20_16385
PFAMsadh_short_C2
Model size786
Max annot lvl28211|Alphaproteobacteria
KEGG koko:K00046
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.82e-95
EggNOG OGsCOG1028@1|root,COG1028@2|Bacteria,1MWGK@1224|Proteobacteria,2TVQ8@28211|Alphaproteobacteria
EC1.1.1.69
DescriptionCOG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
Cds size786
COG categoryIQ
BRITEko00000,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186070.2275314-CDS-P-wetherbeei_contig15885:180..9661683186070.2275314-CDS-P-wetherbeei_contig15885:180..966Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig15885 181..966 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig15885.1.1prot_P-wetherbeei_contig15885.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig15885 181..966 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig15885.1.1

>prot_P-wetherbeei_contig15885.1.1 ID=prot_P-wetherbeei_contig15885.1.1|Name=mRNA_P-wetherbeei_contig15885.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=262bp
MSSALFDLHGHVALVTGGNSGIGLGMADALAAQGASVAIWGTNADKNAAA
AEQLRAHGGQVLDLVCDVGDQGAVISGMAEVVASLGRVDSCFVNAGVSGK
APSFVGMTDDEWHRVLRVNLDGAFYTAQEAVKHMVQRHDAGDTAGGSIVF
TSSGSAFFGAQRGQHYASSKGAVISMMKGIAVEHARHGVRCNALIPGWIE
SDMTAPAFGWDKFVDNVMPRLPARRWGVGADFGGIAVYLASAASSYHTAD
AITIDGGYYSF*
back to top

mRNA from alignment at P-wetherbeei_contig15885:181..966+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig15885.1.1 ID=mRNA_P-wetherbeei_contig15885.1.1|Name=mRNA_P-wetherbeei_contig15885.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=786bp|location=Sequence derived from alignment at P-wetherbeei_contig15885:181..966+ (Phaeothamnion wetherbeei SAG_119_79)
ATGTCGTCTGCCCTCTTCGATCTTCACGGACACGTCGCCCTCGTCACGGG CGGCAACAGCGGGATCGGCCTCGGCATGGCTGATGCACTGGCCGCCCAGG GCGCATCCGTGGCGATCTGGGGCACCAACGCCGACAAGAACGCCGCGGCG GCCGAGCAGCTGCGCGCGCACGGTGGGCAGGTGCTCGACCTCGTCTGCGA TGTCGGCGACCAGGGTGCGGTGATCAGCGGCATGGCCGAAGTGGTTGCTT CCCTCGGCCGCGTCGACTCCTGCTTCGTCAACGCGGGCGTCAGCGGCAAG GCGCCGAGCTTCGTCGGGATGACCGACGACGAGTGGCACCGCGTCCTGCG GGTGAACCTCGACGGCGCGTTCTACACGGCGCAGGAAGCGGTCAAGCACA TGGTGCAGCGGCACGACGCCGGCGACACCGCCGGTGGCTCGATCGTGTTC ACCTCGTCCGGCTCGGCGTTCTTCGGCGCGCAGCGCGGCCAGCACTACGC CAGCTCGAAGGGCGCGGTCATCTCGATGATGAAGGGCATCGCCGTCGAGC ACGCTCGCCACGGCGTGCGTTGCAACGCGCTGATCCCGGGGTGGATCGAG AGCGACATGACCGCGCCGGCGTTCGGCTGGGACAAGTTCGTCGACAACGT CATGCCCCGCCTGCCGGCGCGGCGATGGGGCGTGGGTGCGGACTTCGGCG GCATCGCCGTGTACCTGGCGAGCGCGGCGAGCAGCTACCACACCGCCGAC GCGATCACGATCGACGGCGGCTACTACTCGTTCTAG
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig15885:181..966+

>mRNA_P-wetherbeei_contig15885.1.1 ID=mRNA_P-wetherbeei_contig15885.1.1|Name=mRNA_P-wetherbeei_contig15885.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=786bp|location=Sequence derived from alignment at P-wetherbeei_contig15885:181..966+ (Phaeothamnion wetherbeei SAG_119_79)
ATGTCGTCTGCCCTCTTCGATCTTCACGGACACGTCGCCCTCGTCACGGG
CGGCAACAGCGGGATCGGCCTCGGCATGGCTGATGCACTGGCCGCCCAGG
GCGCATCCGTGGCGATCTGGGGCACCAACGCCGACAAGAACGCCGCGGCG
GCCGAGCAGCTGCGCGCGCACGGTGGGCAGGTGCTCGACCTCGTCTGCGA
TGTCGGCGACCAGGGTGCGGTGATCAGCGGCATGGCCGAAGTGGTTGCTT
CCCTCGGCCGCGTCGACTCCTGCTTCGTCAACGCGGGCGTCAGCGGCAAG
GCGCCGAGCTTCGTCGGGATGACCGACGACGAGTGGCACCGCGTCCTGCG
GGTGAACCTCGACGGCGCGTTCTACACGGCGCAGGAAGCGGTCAAGCACA
TGGTGCAGCGGCACGACGCCGGCGACACCGCCGGTGGCTCGATCGTGTTC
ACCTCGTCCGGCTCGGCGTTCTTCGGCGCGCAGCGCGGCCAGCACTACGC
CAGCTCGAAGGGCGCGGTCATCTCGATGATGAAGGGCATCGCCGTCGAGC
ACGCTCGCCACGGCGTGCGTTGCAACGCGCTGATCCCGGGGTGGATCGAG
AGCGACATGACCGCGCCGGCGTTCGGCTGGGACAAGTTCGTCGACAACGT
CATGCCCCGCCTGCCGGCGCGGCGATGGGGCGTGGGTGCGGACTTCGGCG
GCATCGCCGTGTACCTGGCGAGCGCGGCGAGCAGCTACCACACCGCCGAC
GCGATCACGATCGACGGCGGCTACTACTCGTTCTAG
back to top