mRNA_P-wetherbeei_contig15818.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig15818.1.1 vs. uniprot
Match: A0A7Y3GZ27_9DELT (Uncharacterized protein n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A7Y3GZ27_9DELT) HSP 1 Score: 120 bits (300), Expect = 5.730e-34 Identity = 53/75 (70.67%), Postives = 59/75 (78.67%), Query Frame = 1
Query: 1 MSNFSFARPQETHPVQKREPVSGTCDSCGAEALMRYPVLSEGGWFMTVKCQQCLHSQSREKWSRLGYVTLLTDSI 225
MSNF F RP E PVQ+REPV+G C CG E L RYPVLSEGGWFM VKCQ CLHSQSRE+W RLG+V L TD++
Sbjct: 1 MSNFVFNRPAELFPVQEREPVAGACAECGEEHLQRYPVLSEGGWFMVVKCQTCLHSQSRERWHRLGHVQLATDAL 75
BLAST of mRNA_P-wetherbeei_contig15818.1.1 vs. uniprot
Match: A0A523PBV0_9PROT (Uncharacterized protein n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A523PBV0_9PROT) HSP 1 Score: 112 bits (281), Expect = 3.820e-31 Identity = 52/76 (68.42%), Postives = 56/76 (73.68%), Query Frame = 1
Query: 1 MSNFSFARPQETHPVQKREPVSGTCDSCGAEALMRYPVLSEGGWFMTVKCQQCLHSQSREKWSRLGYVTLLTDSID 228
MSNF F RP E PVQ RE V+G C CGAE L RYPVLSEGGWFM VKCQ+CL S SRE W RLG V LL+D +D
Sbjct: 1 MSNFVFTRPTEKAPVQARESVAGACPDCGAEGLRRYPVLSEGGWFMAVKCQECLCSVSREPWRRLGPVQLLSDELD 76
BLAST of mRNA_P-wetherbeei_contig15818.1.1 vs. uniprot
Match: UPI001C4A56C7 (hypothetical protein n=1 Tax=Pseudonocardia abyssalis TaxID=2792008 RepID=UPI001C4A56C7) HSP 1 Score: 97.1 bits (240), Expect = 6.290e-25 Identity = 42/71 (59.15%), Postives = 52/71 (73.24%), Query Frame = 1
Query: 13 SFARPQETHPVQKREPVSGTCDSCGAEALMRYPVLSEGGWFMTVKCQQCLHSQSREKWSRLGYVTLLTDSI 225
+F RPQE +EPV GTC +CGA+ L RYPV SEGGWF VKCQ CLHS SRE+W+ LG + LL+D++
Sbjct: 3 AFPRPQEPTVTLVKEPVDGTCPTCGADQLRRYPVNSEGGWFQVVKCQNCLHSLSRERWNLLGSLQLLSDTL 73
BLAST of mRNA_P-wetherbeei_contig15818.1.1 vs. uniprot
Match: A0A1H4WYS0_9NOCA (Uncharacterized protein n=4 Tax=Rhodococcus TaxID=1827 RepID=A0A1H4WYS0_9NOCA) HSP 1 Score: 89.4 bits (220), Expect = 6.850e-22 Identity = 40/62 (64.52%), Postives = 44/62 (70.97%), Query Frame = 1
Query: 40 PVQKREPVSGTCDSCGAEALMRYPVLSEGGWFMTVKCQQCLHSQSREKWSRLGYVTLLTDSI 225
PV +R PV G C CGAE L RYPV+SEGGWF VKCQQCL S R WSRLG + LLTD +
Sbjct: 11 PVLERTPVDGHCPRCGAEELRRYPVVSEGGWFQVVKCQQCLLSLDRSPWSRLGPIQLLTDLL 72
BLAST of mRNA_P-wetherbeei_contig15818.1.1 vs. uniprot
Match: A0A4R1I2N8_9PSEU (Uncharacterized protein n=1 Tax=Pseudonocardia endophytica TaxID=401976 RepID=A0A4R1I2N8_9PSEU) HSP 1 Score: 88.6 bits (218), Expect = 1.420e-21 Identity = 39/70 (55.71%), Postives = 47/70 (67.14%), Query Frame = 1
Query: 16 FARPQETHPVQKREPVSGTCDSCGAEALMRYPVLSEGGWFMTVKCQQCLHSQSREKWSRLGYVTLLTDSI 225
F RP+E +EPV G+C +C A L RYPV SEGGWF VKCQ CLHS SRE+W+ G + LL D+I
Sbjct: 4 FPRPEEPTVSLVKEPVDGSCPACSAAELRRYPVNSEGGWFQVVKCQNCLHSVSRERWNLFGSLQLLADTI 73
BLAST of mRNA_P-wetherbeei_contig15818.1.1 vs. uniprot
Match: A0A417Y6X6_9ACTN (Uncharacterized protein n=1 Tax=Nocardioides immobilis TaxID=2049295 RepID=A0A417Y6X6_9ACTN) HSP 1 Score: 88.6 bits (218), Expect = 1.500e-21 Identity = 39/64 (60.94%), Postives = 45/64 (70.31%), Query Frame = 1
Query: 34 THPVQKREPVSGTCDSCGAEALMRYPVLSEGGWFMTVKCQQCLHSQSREKWSRLGYVTLLTDSI 225
T PV +R PV GTCD CG +L YPVLSEGGWF VKCQ CLHS R +WS LG V+L ++ I
Sbjct: 9 TGPVVERTPVEGTCDRCGEASLTAYPVLSEGGWFKVVKCQTCLHSVERTRWSLLGPVSLTSEGI 72
BLAST of mRNA_P-wetherbeei_contig15818.1.1 vs. uniprot
Match: A0A6I3EU63_9ACTN (Uncharacterized protein n=2 Tax=root TaxID=1 RepID=A0A6I3EU63_9ACTN) HSP 1 Score: 87.0 bits (214), Expect = 5.780e-21 Identity = 37/61 (60.66%), Postives = 41/61 (67.21%), Query Frame = 1
Query: 43 VQKREPVSGTCDSCGAEALMRYPVLSEGGWFMTVKCQQCLHSQSREKWSRLGYVTLLTDSI 225
V RE V G+C CG L RYPVLS+GGWFM KCQ CLHS R W+RLGY+ L DSI
Sbjct: 12 VVNREAVEGSCPECGGAQLQRYPVLSDGGWFMATKCQDCLHSLERTPWNRLGYIVLPEDSI 72
BLAST of mRNA_P-wetherbeei_contig15818.1.1 vs. uniprot
Match: A0A535M2I4_9CHLR (Uncharacterized protein n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A535M2I4_9CHLR) HSP 1 Score: 85.9 bits (211), Expect = 1.660e-20 Identity = 37/71 (52.11%), Postives = 47/71 (66.20%), Query Frame = 1
Query: 13 SFARPQETHPVQKREPVSGTCDSCGAEALMRYPVLSEGGWFMTVKCQQCLHSQSREKWSRLGYVTLLTDSI 225
++ R + +E V G C SCG++ L RYPVLSEGGW+M KCQ CL S RE+WSRLG + LLTD +
Sbjct: 3 TYPRSDQPRLFVTKEDVQGVCPSCGSQNLKRYPVLSEGGWWMITKCQNCLFSVQRERWSRLGSIALLTDLL 73
BLAST of mRNA_P-wetherbeei_contig15818.1.1 vs. uniprot
Match: A0A1G7XCT4_9MICO (Uncharacterized protein n=1 Tax=Microbacterium pygmaeum TaxID=370764 RepID=A0A1G7XCT4_9MICO) HSP 1 Score: 85.9 bits (211), Expect = 1.790e-20 Identity = 37/60 (61.67%), Postives = 43/60 (71.67%), Query Frame = 1
Query: 49 KREPVSGTCDSCGAEALMRYPVLSEGGWFMTVKCQQCLHSQSREKWSRLGYVTLLTDSID 228
+R V G C CG L RYPV SEGGWFM VKCQ+CLHS SRE W+RLG + LL D+I+
Sbjct: 13 ERTRVEGVCPQCGTGELARYPVNSEGGWFMVVKCQECLHSVSREPWNRLGPIALLVDTIE 72
BLAST of mRNA_P-wetherbeei_contig15818.1.1 vs. uniprot
Match: UPI0003AAB142 (hypothetical protein n=1 Tax=Amycolatopsis orientalis TaxID=31958 RepID=UPI0003AAB142) HSP 1 Score: 84.7 bits (208), Expect = 4.740e-20 Identity = 36/59 (61.02%), Postives = 46/59 (77.97%), Query Frame = 1
Query: 49 KREPVSGTCDSCGAEALMRYPVLSEGGWFMTVKCQQCLHSQSREKWSRLGYVTLLTDSI 225
+R+PV G+C C +E L YPV +EGGW++TVKCQQCLHS RE WSRLG V LL+D++
Sbjct: 15 ERKPVEGSCPHCRSEDLAHYPVNTEGGWYLTVKCQQCLHSIHREPWSRLGPVHLLSDTL 73 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig15818.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig15818.1.1 >prot_P-wetherbeei_contig15818.1.1 ID=prot_P-wetherbeei_contig15818.1.1|Name=mRNA_P-wetherbeei_contig15818.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=77bp MSNFSFARPQETHPVQKREPVSGTCDSCGAEALMRYPVLSEGGWFMTVKCback to top mRNA from alignment at P-wetherbeei_contig15818:680..910- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig15818.1.1 ID=mRNA_P-wetherbeei_contig15818.1.1|Name=mRNA_P-wetherbeei_contig15818.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=231bp|location=Sequence derived from alignment at P-wetherbeei_contig15818:680..910- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig15818:680..910- >mRNA_P-wetherbeei_contig15818.1.1 ID=mRNA_P-wetherbeei_contig15818.1.1|Name=mRNA_P-wetherbeei_contig15818.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=231bp|location=Sequence derived from alignment at P-wetherbeei_contig15818:680..910- (Phaeothamnion wetherbeei SAG_119_79)back to top |