mRNA_P-wetherbeei_contig10444.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig10444.2.1 vs. uniprot
Match: A0A6H5J981_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J981_9PHAE) HSP 1 Score: 189 bits (480), Expect = 5.030e-48 Identity = 143/324 (44.14%), Postives = 172/324 (53.09%), Query Frame = 1 Query: 271 ESDEEDSTKHLNFLLDGLEEPALISVLQRTPALTQSVSRLLPFLTYGDRGAARTLAAKFVQVLDWEAVASAEVASLAPDSDEAXXXXXXXXXXXXXXXXXXXXXXXXXCGTDAANIPAAGLRRRCFAEAAEGLGGDRTSATVRDCLLETGFLAKTAAFVLRDAPGHASGQPPQPAAATGAAAGDTAFSAPTAXXXXXXXXXXXLATLAAAGRVTEEWEEYFRRPALPAALRALTGLCRGHRSSQEALWRGGLLPVLHRAETTSVSGQVGLLAETLLEAVAEGNEPLAAELAALRARTREAKRLRAQQQRERALRAMGVKVPVPG 1242 E E +STKH++FL + LEEPAL+ VL RTPAL Q+VSRLLPFLTYG + AA LA KF +V+ W+ V + ++ A D A LRRRC+ AAEGLG R++ +R CLLE GFL F+L +AP S P XXXXXXXX G +W+ YF R LPAAL+ L GLCRGH +Q L GLL LH E TS SG+VGLLAETLLEAVA+ N AE+ LR TR AKR AQ +RERAL+AMGV+ G Sbjct: 7764 EQRETESTKHVSFLFEALEEPALMDVLGRTPALAQAVSRLLPFLTYGRKAAAGLLAEKFAEVVRWDDVVTDDLQERAAGGKAG----------------------------DGPPTSPAQLRRRCYMAAAEGLGLGRSANVIRACLLERGFLETAVTFLLLEAP-----------------------SVPPHLSAXXXXXXXXXXXXXXXGG---DWKAYFERAGLPAALKMLAGLCRGHAGAQSFLAERGLLERLHWMEGTSTSGEVGLLAETLLEAVAQDNALTGAEITRLRDETRAAKRKLAQARRERALKAMGVRATGAG 8033
BLAST of mRNA_P-wetherbeei_contig10444.2.1 vs. uniprot
Match: A0A835Z9Y3_9STRA (E3 ubiquitin-protein ligase UBR4-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9Y3_9STRA) HSP 1 Score: 144 bits (362), Expect = 1.000e-32 Identity = 123/331 (37.16%), Postives = 163/331 (49.24%), Query Frame = 1 Query: 265 SAESDEEDS-TKHLNFLLDGLEEP---ALISVLQRTPALTQSVSRLLPFLTYGDRGAARTLAAKFVQVLDWEAVASAEVASLAPDSDEAXXXXXXXXXXXXXXXXXXXXXXXXXCGTDAANIPAAG-LRRRCFAEAAEGLGGDRTSATVRDCLLETGFLAKTAAFVLRDAPGHASGQPPQPAAATGAAAGDTAFSAPTAXXXXXXXXXXXLATLAAAGRVTEEWEEYFRRPALPAALRALTGLCRGHRSSQEALWRGGLLPVLHRAETTSVSGQVGLLAETLLEAVAEGNE----PLAAE---LAALRARTREAKRLRAQQQRERALRAMG 1221 +AE DE++S +HL+FLL L E AL+ L PAL SVSR +PFLTYG AAR LA + VQV+DWEAVA E A A ++ + P+A +RR+CF A + +G D + VR LL+ GF+A TAAFV++ P SG+ GD EW Y++RPAL A++ L+GLC+GH SQ+ L G+L LH A + + SG VGLLAE LL+ VA E P AA + A+R ++ AKR AQ QR +AL+AMG Sbjct: 5707 AAEGDEDESGAQHLHFLLTALLEDGEGALVMALLSKPALAVSVSRTMPFLTYGRTAAARMLAERLVQVVDWEAVAEEESAIRAAENAQPP------------------------------RAPSAQEVRRQCFLGALDMMGAD-SGRLVRHSLLQAGFVASTAAFVMQGVPDDKSGR------------GD-------------------------------EWAAYYKRPALERAIKTLSGLCKGHTPSQQVLLEQGVLAALHIAASNASSGSVGLLAEALLDEVASNAECTTGPPAAPAEAVKAMREASKAAKREMAQLQRAKALQAMG 5963
BLAST of mRNA_P-wetherbeei_contig10444.2.1 vs. uniprot
Match: D8LLX1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLX1_ECTSI) HSP 1 Score: 106 bits (265), Expect = 9.100e-21 Identity = 103/329 (31.31%), Postives = 118/329 (35.87%), Query Frame = 1 Query: 271 ESDEEDSTKHLNFLLDGLEEPALISVLQRTPALTQSVSRLLPFLTYGDRGAARTLAAKFVQVLDWEAVASAEVASLAPDSDEAXXXXXXXXXXXXXXXXXXXXXXXXXCGTDAANIPAAGLRRRCFAEAAEGLGGDRTSATVRDCLLETGFLAKTAAFVLRDAPGHASGQPPQPAAATGAAAGDTAFSAPTAXXXXXXXXXXXLATLAAAGRVTEEWEEYFRRPALPAALRALTGLCRGHRSSQEALWRGGLLPVLHRAETTSVSGQVGLLAETLLEAVAEGNEPLAAELAALRARTREAKRLRAQQQRERALRAMGVKVPVPGIMSVL 1257 E E +STKH++FL + LEEPALI VL RTPAL Q+VSRLLPFLTYG + AA LA KF E YF R LPAAL+ L GLCRGH +Q L GLL LH E TS SG+VGLLAETLLEA A+ N AE+ LR TR AKR AQ +RERAL+AMGV+ G S + Sbjct: 39 EQRETESTKHVSFLFEALEEPALIDVLGRTPALAQAVSRLLPFLTYGRKAAAGLLAEKFA-------------------------------------------------------------------------------------------------------------------------------------------------------------EAYFERAGLPAALKMLAGLCRGHAGAQGFLAERGLLERLHWMEGTSTSGEVGLLAETLLEAAAQDNALTGAEVTRLREETRAAKRKLAQARRERALKAMGVRAAGTGKSSAV 210
BLAST of mRNA_P-wetherbeei_contig10444.2.1 vs. uniprot
Match: A0A7S4R1Y5_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4R1Y5_9STRA) HSP 1 Score: 75.5 bits (184), Expect = 1.380e-10 Identity = 89/331 (26.89%), Postives = 134/331 (40.48%), Query Frame = 1 Query: 331 PALISVLQRT---PALTQSVSRLLPFLTYGDRGAARTLAAKFVQVLDWEAVASAEVASLAPDSDEAXXXXXXXXXXXXXXXXXXXXXXXXXCGTDAANIPAAGLRRRCFAEAAEGLGGDRTSATVRDCLLETGFLAKTAAFVLRDAPGHASGQPPQPAAATGAAAGDTAFSAPTAXXXXXXXXXXXLATLAAAGRVTEEWEEYFRRPALPAALRALTGLCRGHRSSQEAL-----------------WRGGLLPVLHRAETTSVSGQ-------VGLLAETLLEAVAEGNEPLAAELAALRARTREAKRLRAQQQRERALRAMGVKVPVPG 1242 P ++S LQ T P L + +++LLPFLTYG + LA+KF++ + +A+ A+ +L S + F E+A L T+R+ L+ GF+ + AFVL+DAP QPP ++A A D +W +YF RP L A R L GLC H +Q + LL H E+TS + +GLL+ETLL+A+ E N+ + +++ +R +TR KR A+++R RAL M PV G Sbjct: 678 PLVLSSLQTTSLSPPLRKIIAKLLPFLTYGQVDQSSELASKFIEYVSIDALTDAQSGTLNGCSS---------------------------------------MLMETFVESAIHLPAVNVCDTLRNELIRQGFVDRVKAFVLKDAPT----QPPPWSSALFAKNHDQELPDDEKKIKRELYET--------------QWRDYFNRPGLHTAFRILIGLCTNHTPTQSFIADVDETVPDPTAKDNSNTMASLLQTCHWIESTSDNNASSISMKGLGLLSETLLDALRENNDMVTSKIDTIRKKTRNRKREIAEERRSRALVGMTSFGPVAG 951
BLAST of mRNA_P-wetherbeei_contig10444.2.1 vs. uniprot
Match: A0A7J7KS30_BUGNE (Ubr4 n=2 Tax=Bugula neritina TaxID=10212 RepID=A0A7J7KS30_BUGNE) HSP 1 Score: 65.9 bits (159), Expect = 9.140e-8 Identity = 39/110 (35.45%), Postives = 65/110 (59.09%), Query Frame = 1 Query: 913 EEWEEYFRRPALPAALRALTGLCRGHRSSQEALWRGGLLPVLHRAETTSVSGQVGLLAETLLEAVAEGNEPLAAELAALRARTREAKRLRAQQQRERALRAMGVKVPVPG 1242 ++W+E+ RP LP LR L G+C GH SQ + ++ +LH+ E S GQ+G LAE L+E + + N+ + ++ +RA+T+ K+ A RE+ L ++G+K G Sbjct: 63 DDWKEFVSRPVLPYVLRLLNGMCSGHAVSQVKVGEA-MIAILHKLEHMSSHGQIGSLAENLMETLCQ-NDSVKKQIQQIRAQTKAEKKRLAMAVREKHLSSIGMKTNKKG 170
BLAST of mRNA_P-wetherbeei_contig10444.2.1 vs. uniprot
Match: A0A131XW91_IXORI (Putative e3 ubiquitin-protein ligase ubr4 isoform x9 (Fragment) n=4 Tax=Ixodes ricinus TaxID=34613 RepID=A0A131XW91_IXORI) HSP 1 Score: 65.9 bits (159), Expect = 1.600e-7 Identity = 43/111 (38.74%), Postives = 65/111 (58.56%), Query Frame = 1 Query: 910 TEEWEEYFRRPALPAALRALTGLCRGHRSSQEALWRGGLLPVLHRAETTSVSGQVGLLAETLLEAVAEGNEPLAAELAALRARTREAKRLRAQQQRERALRAMGVKVPVPG 1242 +E W+E+ +PAL LR LTGL RGH ++Q L +P++HR E S VG LAE L+EA+ E N +A ++ +R +TR+ K+ A RE+ L +G++ G Sbjct: 3765 SENWKEFTSKPALKYVLRILTGLSRGHETTQ-LLVSAECIPIIHRLEQVSSDEHVGSLAENLMEALKE-NPNVAQKIEEVRKQTRDEKKRLAMAMREKQLGELGMRTNEKG 3873
BLAST of mRNA_P-wetherbeei_contig10444.2.1 vs. uniprot
Match: A0A6P7V1L2_IXOSC (LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase UBR4 n=1 Tax=Ixodes scapularis TaxID=6945 RepID=A0A6P7V1L2_IXOSC) HSP 1 Score: 65.9 bits (159), Expect = 1.620e-7 Identity = 43/111 (38.74%), Postives = 65/111 (58.56%), Query Frame = 1 Query: 910 TEEWEEYFRRPALPAALRALTGLCRGHRSSQEALWRGGLLPVLHRAETTSVSGQVGLLAETLLEAVAEGNEPLAAELAALRARTREAKRLRAQQQRERALRAMGVKVPVPG 1242 +E W+E+ +PAL LR LTGL RGH ++Q L +P++HR E S VG LAE L+EA+ E N +A ++ +R +TR+ K+ A RE+ L +G++ G Sbjct: 4887 SENWKEFTSKPALKYVLRILTGLSRGHETTQ-LLVSAECIPIIHRLEQVSSDEHVGSLAENLMEALKE-NPNVAQKIEEVRKQTRDEKKRLAMAMREKQLGELGMRTNEKG 4995
BLAST of mRNA_P-wetherbeei_contig10444.2.1 vs. uniprot
Match: A0A7S2LBI9_9STRA (Hypothetical protein n=2 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LBI9_9STRA) HSP 1 Score: 65.1 bits (157), Expect = 2.420e-7 Identity = 90/345 (26.09%), Postives = 139/345 (40.29%), Query Frame = 1 Query: 265 SAESDEEDSTKHLNFLLDGLEEPALISVLQRTPALTQSVSRLLPFLTYGDRGAARTLAAKFVQVLDWEAVASAEVASLAPDSDEAXXXXXXXXXXXXXXXXXXXXXXXXXCGTDAANIPAAGLRRRCFAEAAEGLGGDRTSATVRDCLLETGFLAKTAAFVLRDAPGHASGQPPQPAAATGAAAGDTAFSAPTAXXXXXXXXXXXLATLAAAGRVTEEWEEYF-RRPALPAALRALTGLCRGHRSSQEALWR-GGLLPVLHRAETTSVSG-----------------QVGLLAETLLEAVAEGNEPLAAELAALRARTREAKRLRAQQQRERALRAMGVKVPVPG 1242 +AE E+ ST + LL+ L E ++ T L + ++ LLPFLTYG + +++ LA +FV + + +A N + + F + L +R LL GF TA F+++DAP PP A + G + A + E+W Y+ R P L ALR L GLC H S+Q AL G + + H E+TS+S ++GL+AETLL+A+ EGNE +++ A R T++ K+ A+++R RAL M + G Sbjct: 564 AAEDAEDTST--VQVLLESLTESESTTL---TAPLRKIIADLLPFLTYGQKSSSKALAEQFVAHIQFPRLAY------------------------------------------TLNGGNSNIVMDTFVQTLLTLPPVVVCNELRAQLLSLGFTGSTAQFIMQDAPRL---PPPWSPALNCSTIG-----------------AKRKRSKADTEALEEQWRAYYSREPGLLMALRMLIGLCTKHGSTQTALVNCDGFVQLCHWMESTSISAANDTSAAASSSSGETRNELGLVAETLLDALQEGNEYCKSKIKAARKATKDRKKELAEERRSRALVGMNIAALTSG 841
BLAST of mRNA_P-wetherbeei_contig10444.2.1 vs. uniprot
Match: A0A6P7W359_IXOSC (LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase UBR4-like n=2 Tax=Ixodes scapularis TaxID=6945 RepID=A0A6P7W359_IXOSC) HSP 1 Score: 64.7 bits (156), Expect = 2.820e-7 Identity = 43/111 (38.74%), Postives = 64/111 (57.66%), Query Frame = 1 Query: 910 TEEWEEYFRRPALPAALRALTGLCRGHRSSQEALWRGGLLPVLHRAETTSVSGQVGLLAETLLEAVAEGNEPLAAELAALRARTREAKRLRAQQQRERALRAMGVKVPVPG 1242 +E W+E+ +PAL LR LTGL RGH ++Q L +P++HR E S VG LAE L+EA+ E N +A + +R +TR+ K+ A RE+ L +G++ G Sbjct: 411 SENWKEFTSKPALKYVLRILTGLSRGHETTQ-LLVSAECIPIIHRLEQVSSDEHVGSLAENLMEALKE-NPNVAQKTEEVRKQTRDEKKRLAMAMREKQLGELGMRTNEKG 519
BLAST of mRNA_P-wetherbeei_contig10444.2.1 vs. uniprot
Match: A0A1Z5L7M9_ORNMO (E3_UbLigase_R4 domain-containing protein (Fragment) n=1 Tax=Ornithodoros moubata TaxID=6938 RepID=A0A1Z5L7M9_ORNMO) HSP 1 Score: 64.3 bits (155), Expect = 3.550e-7 Identity = 42/111 (37.84%), Postives = 65/111 (58.56%), Query Frame = 1 Query: 910 TEEWEEYFRRPALPAALRALTGLCRGHRSSQEALWRGGLLPVLHRAETTSVSGQVGLLAETLLEAVAEGNEPLAAELAALRARTREAKRLRAQQQRERALRAMGVKVPVPG 1242 TE W+E+ +PAL LR LTGL RGH ++Q L +P++HR E S VG LAE L+EA+ E + +A ++ +R +TR+ K+ A R++ L +G++ G Sbjct: 461 TENWKEFTSKPALKYVLRILTGLSRGHETTQ-LLVSAECVPIIHRLEQVSSDEHVGSLAENLMEALKE-HPDVAQKIEEVRKQTRDEKKRLAMAMRQKQLGQLGMRTNEKG 569 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig10444.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 17
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig10444.2.1 >prot_P-wetherbeei_contig10444.2.1 ID=prot_P-wetherbeei_contig10444.2.1|Name=mRNA_P-wetherbeei_contig10444.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=487bp MIETLVADVAAMAQSSSMQGDVGSAGAGAAAAGGTDATPVAADDGGVDGGback to top mRNA from alignment at P-wetherbeei_contig10444:734..2224+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig10444.2.1 ID=mRNA_P-wetherbeei_contig10444.2.1|Name=mRNA_P-wetherbeei_contig10444.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1491bp|location=Sequence derived from alignment at P-wetherbeei_contig10444:734..2224+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig10444:734..2224+ >mRNA_P-wetherbeei_contig10444.2.1 ID=mRNA_P-wetherbeei_contig10444.2.1|Name=mRNA_P-wetherbeei_contig10444.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1461bp|location=Sequence derived from alignment at P-wetherbeei_contig10444:734..2224+ (Phaeothamnion wetherbeei SAG_119_79)back to top |